b9e16ea951
overwriting datasets makes sense in special cases
...
but prevent user from accidently doing that and store the information
2020-05-25 20:13:57 +02:00
248f199a7b
track creation time
2020-05-25 18:51:10 +02:00
b1b8d02320
typo
2020-05-25 16:41:23 +02:00
9d7158b51a
Merge branch 'misc-improvements' of magit1.mpie.de:/damask/DAMASK into misc-improvements
2020-05-25 16:40:23 +02:00
f07eaf19d0
fixed broadcasting + corresponding test
2020-05-25 16:37:08 +02:00
784d6d09d9
cleaning
2020-05-25 15:55:38 +02:00
dad7c7a2a0
Merge branch 'vectorize_rotation' into misc-improvements
2020-05-25 15:50:03 +02:00
3e2cbef780
Merge remote-tracking branch 'origin/development' into vectorize_rotation
2020-05-25 15:46:27 +02:00
77b68ab86f
using rotation class for rotations
2020-05-25 09:39:39 +02:00
39505507f1
not needed anymore
2020-05-25 08:07:12 +02:00
17aa3c00dc
more tests
2020-05-24 22:52:00 +02:00
296308e11e
fix for rotation around 90 deg
...
more tests
2020-05-24 20:52:19 +02:00
34adefd4ca
simplified
2020-05-24 18:30:45 +02:00
594fcb2b72
seems more appropriate
2020-05-24 15:10:53 +02:00
3231a49107
centralize functionality
2020-05-24 09:39:58 +02:00
a26cba1457
calling a few missing statements
2020-05-24 09:06:11 +02:00
a3d9520c4b
polishing
2020-05-23 15:54:28 +02:00
82419f8649
testing selection
2020-05-23 10:38:25 +02:00
8a848979aa
missing test for IPF color
2020-05-23 09:13:45 +02:00
0549e33a00
vectorized/fast
2020-05-23 08:38:57 +02:00
e2cf527dfb
add missing test
2020-05-23 08:19:08 +02:00
b8e83cd263
do not overwrite
2020-05-22 20:42:13 +02:00
7bd681a5ed
very simple test
2020-05-22 19:04:02 +02:00
11eda510aa
testing functionality of Lattice separately
2020-05-22 18:45:27 +02:00
b33de48528
testing broadcasting
2020-05-22 15:12:37 +02:00
23b1381eaf
give credit
2020-05-21 11:30:25 +02:00
16f30a10d0
polishing
2020-05-20 23:50:08 +02:00
353fd3ceb6
more tests
...
now 95% test coverage of Rotation class
2020-05-20 19:16:31 +02:00
128a96e7f6
vectorized formula is enough
2020-05-20 18:13:51 +02:00
bb419d49df
polishing
2020-05-20 16:19:12 +02:00
b59d773689
store all test data together
2020-05-20 15:26:49 +02:00
9240dd59b2
mark as internal
...
all functionality (+ sanity checks) can be done with the class
functionality
2020-05-20 11:11:07 +02:00
9694767997
all seems to work now
2020-05-20 09:01:38 +02:00
1d8903bb0c
transition code
2020-05-20 00:18:44 +02:00
1fa4a07bb8
for backward compatibility
2020-05-19 23:39:01 +02:00
3e00269179
again some more tests
2020-05-19 23:24:12 +02:00
1c53a37de4
more tests and adjustments to tolerances
2020-05-19 21:03:30 +02:00
a6b0aaffba
more tests
...
Hotfix needed for axis angle to matrix (not used in DAMASK, needs
further investigation)
2020-05-19 19:41:50 +02:00
de79a5af43
directly test the internal conversions
...
some work to do ...
2020-05-19 09:55:23 +02:00
065c624f94
fix for backward compatibility
2020-05-19 09:10:14 +02:00
ebf05a279e
standard name
2020-05-19 08:59:03 +02:00
1a3a4a800e
vectorized
2020-05-19 07:59:24 +02:00
b6eebcd704
small fixes (testing P=+1)
2020-05-19 07:57:40 +02:00
b200894a40
bugfix and further test
2020-05-19 07:57:40 +02:00
3dc90ddb94
use the formula from the paper, not from the reference implementation
...
a few multiplications should be faster than a transpose
2020-05-19 07:57:40 +02:00
a25dd1c438
cleaning
2020-05-19 07:57:40 +02:00
743e91a78d
cleaning
2020-05-17 08:01:34 +02:00
652ece6bb3
fix: wrong capitalization
2020-05-17 07:25:17 +02:00
2550447169
Merge branch 'development' into docstring-sphinx-adjustments
2020-05-17 00:10:58 +02:00
a90865c877
non-vectorized versions not needed anymore
...
using them only for testing purposes
2020-05-17 00:10:18 +02:00
9ba419c2c3
Merge branch 'development' into vectorize_rotation
2020-05-16 20:58:06 +02:00
a4dfd7fc74
missing tests
2020-05-16 17:23:05 +02:00
044f069437
bugfix: selected wrong data
2020-05-16 17:06:55 +02:00
a279785149
Merge branch 'development' into misc-improvements
2020-05-16 17:01:48 +02:00
61ac40c259
more tests
2020-05-16 13:54:53 +02:00
19638168e6
more sensible type checking and errors
2020-05-16 13:23:32 +02:00
9fa1539163
using new names
2020-05-16 11:17:12 +02:00
235f3c0df7
bugfix: copy and paste error
2020-05-16 11:16:52 +02:00
e2ba294b75
bugfix: wrong variable
2020-05-16 09:40:32 +02:00
2dc46b783a
simplified and tested
2020-05-16 00:58:40 +02:00
dc508cdfce
Merge remote-tracking branch 'origin/misc-improvements' into vectorize_rotation
2020-05-15 23:25:42 +02:00
3fd868dc45
Merge branch 'development' into vectorize_rotation
2020-05-15 23:25:36 +02:00
b5b9bfaa99
need space at end of definition list
2020-05-13 11:36:16 +02:00
66b928c5af
using doctest style
...
https://docs.python.org/3/library/doctest.html
https://numpy.org/doc/stable/docs/howto_document.html#sections (section
15)
2020-05-13 10:47:49 +02:00
6f3b526811
Merge branch 'development' into docstring-sphinx-adjustments
2020-05-13 10:38:45 +02:00
90f93d2399
Merge branch 'integrate-lambert' into 'development'
...
Integrate lambert
See merge request damask/DAMASK!166
2020-05-12 23:36:08 +02:00
6928a8290f
less whitespace,
...
alingment only within one vector/tensor
2020-05-10 13:02:26 +02:00
c8701a4665
Cleanup/better readability
2020-05-08 12:15:10 +02:00
b75e98ca3f
forgotten debug statements
...
+ polishing of XDMF output
2020-05-07 19:12:05 +02:00
c2b4f5516e
DADF5_postResults tries to combine datasets, this does not work
2020-05-07 00:14:14 +02:00
fcd0028b83
avoid line length limit (maximum line length 182 > 132
2020-05-06 14:33:04 +02:00
d977f2ad25
already merged
2020-05-06 14:26:54 +02:00
26f55781ae
merge test into gridFilters
2020-05-06 14:26:15 +02:00
a122a307b9
div test done
2020-05-06 14:14:18 +02:00
d4091a21a8
grad test done
2020-05-06 13:05:53 +02:00
8b4baecdee
better looking test fields
2020-05-06 12:54:24 +02:00
bd518b2806
test_curl done
2020-05-06 12:44:56 +02:00
9626833339
Merge branch 'development' into pytest-curl-div-grad-2
2020-05-05 22:45:30 +02:00
ef4a4dad4a
shape property and numpy-like broadcasting
...
this makes it easy to apply a single rotation to a field
2020-05-05 14:44:08 +02:00
eeb0df3a55
do not store absolute path
2020-05-05 10:42:54 +02:00
307debebd4
Correct shapes for gradient calculations
2020-05-05 10:22:23 +02:00
31c397255d
equivalent (for a valid DADF5 file) but faster
2020-05-05 10:18:48 +02:00
0650f46ab1
Tests for gradient
2020-05-05 10:13:30 +02:00
14cdc031e0
write XDMF files
...
the limitation to scalar, 3-vector and 3x3-tensor comes currently from
XDMF/vtk/paraview
extension to multiple constituents and unstructured meshes might be
possible
2020-05-05 09:57:22 +02:00
6e99956b58
Merge branch 'development' into misc-improvements
2020-05-05 09:22:53 +02:00
5f3f87cd68
vectorizing cubochoric conversions
2020-05-04 17:43:38 +02:00
7d1e0850ab
test + resulting bug fix
2020-05-03 17:04:03 +02:00
5d4b554b00
WIP: vectorizing
2020-05-03 07:48:13 +02:00
c241eaec15
rely on correct input data
2020-05-03 07:23:46 +02:00
f0bb50b97d
vectorized rotation function
2020-05-02 15:22:17 +02:00
c7a77ebc26
Merge branch 'development' into integrate-lambert
2020-05-02 09:21:42 +02:00
2df78e4e2f
vecorized pyramid function for lambert projection
2020-05-02 09:17:31 +02:00
b88f5ec0c8
clean up
2020-05-01 14:53:40 +02:00
ce9bdc50a4
common variable names
2020-04-29 14:46:58 +02:00
9e79935add
Merge branch 'development' into less-shell-scripts
2020-04-28 20:43:16 +02:00
9273c88782
[skip ci] WIP: migrating from PRIVATE repo
2020-04-28 09:42:27 +02:00
2d14790863
the result of a differential operator operating on a constant field is 0
2020-04-27 05:08:47 +02:00
6864b9525d
go back to original dir as soon as possible
2020-04-26 14:52:27 +02:00
f02c77b6d0
more reasonable tolerance
...
still relatively high because ctf files store position with constant
number of digits and floating dot. Hence, the precision is very low
2020-04-24 20:01:57 +02:00
1610d5a5d2
Merge branch 'development' into misc-improvements
2020-04-24 20:01:40 +02:00
707324887f
inform the user about planned functionality
2020-04-24 06:52:09 +02:00
042f64200c
Merge branch 'development' into vectorize_rotation
2020-04-24 06:31:14 +02:00
898cf42aca
Merge branch 'fix-grid-convention' into 'development'
...
Fix grid convention
See merge request damask/DAMASK!160
2020-04-23 19:02:23 +02:00
cc3fa156cf
support change of directory one object has been created
2020-04-23 16:29:20 +02:00
a0b7c51bec
less strict tolerances
...
grid position reported by EBSD has only a few decimal places, so
rounding errors occur
2020-04-22 23:32:34 +02:00
8ba547a1b5
no need for an extra file
2020-04-22 13:23:50 +02:00
a39e6b7af9
hide internal variables
2020-04-22 13:12:30 +02:00
3621dddd66
test deviatoric part for known analytic solution
2020-04-22 09:16:53 +02:00
53b8c1c893
simplified
2020-04-22 08:58:43 +02:00
a8c6fdd9ba
for the sake of completeness
2020-04-22 07:40:02 +02:00
7efe14be35
Merge branch 'development' into vectorize_rotation
2020-04-21 19:29:30 +02:00
97a5880d76
ensure correct shape
2020-04-21 13:22:55 +02:00
75d7238376
vectorized as_XXX
2020-04-21 12:27:50 +02:00
ae3eca5f98
fix for vectorized from_random
2020-04-21 12:08:16 +02:00
ac75b9e4ca
improved reporting + test
2020-04-21 11:17:15 +02:00
23fc58699f
vectorize Rotation.fromXXX functions
2020-04-21 10:55:45 +02:00
4a05cdbbbb
copy and paste error
2020-04-21 03:26:26 +02:00
528378eba2
polishing/bugfix
...
* HDF5 data has x fast, therefore reshape needs to be aware of 'F' order
* Datatype for True/False is 'bool' in python, not 'Boolean'
2020-04-20 22:51:51 +02:00
00cb17ccfa
commenting
2020-04-20 22:47:55 +02:00
93db1b37ca
some useful information
2020-04-20 22:32:13 +02:00
25d29bf438
no need for Fortran order forward/backward
2020-04-20 20:24:55 +02:00
1ccda22ae3
nothing to flatten here
2020-04-20 20:16:25 +02:00
4db91fff03
simplified
2020-04-20 20:14:27 +02:00
f519e62cd5
testing data layout checks
2020-04-20 13:56:33 +02:00
02dde3c255
test also invalid operations
2020-04-20 13:10:13 +02:00
9979eb58f4
consistent layout for grid data
...
has now always the shape ([x,y,z,...]) with x fastest. For conversion from or
to linear layout ([x*y*z,...]), e.g. storage in ASCII table, reshape needs
to have the 'F' option.
Credits to Vitesh and Fran for pointing this out.
2020-04-20 13:09:59 +02:00
bce5ed62d5
polishing
2020-04-20 10:13:15 +02:00
e3958263e3
Merge branch 'development' into misc-improvements
2020-04-15 21:03:51 +02:00
03aa6f9c80
Merge branch 'vectorize_rotation' into development
2020-04-14 19:34:11 +02:00
d3eba41519
[skip ci] fixed bug of double execution of np.degrees in asAxisAngle
2020-04-14 12:22:41 -04:00
69857176b2
search and replace error
2020-04-14 15:33:20 +02:00
93c75cada3
numpydoc style
2020-04-12 15:38:38 +02:00
aaeec16c66
proper indentation for sphinx
2020-04-12 15:34:29 +02:00
b6b98bd14f
more meaningful
2020-04-12 15:20:09 +02:00
c6c1878b13
asterisk is the emphasize sign for restructured text
...
not really needed here
2020-04-12 15:19:32 +02:00
3d10266fbc
similar style as for other conversions
2020-04-12 01:29:11 +02:00
04fbc38a4b
keep namespace clean and avoid overwriting in fromXXX functions
2020-04-12 01:19:11 +02:00
f41a47ce8b
polishing and slightly stricter tolerances
2020-04-11 23:27:25 +02:00
c0c37fe6a5
polishing
2020-04-11 20:42:46 +02:00
c57f96cd6e
also missing
2020-04-11 18:32:06 +02:00
8c61f67e34
cleaning
2020-04-11 18:24:54 +02:00
296a75d452
where not needed
2020-04-11 18:00:59 +02:00
fac33ec408
polishing
2020-04-11 17:23:54 +02:00
51104bfc13
do not transpose for the standard case
2020-04-11 17:19:12 +02:00
cb9daccdd7
homochoric representation vectorized
2020-04-11 16:14:40 +02:00
99655c9f61
more vectorized functions
2020-04-11 13:59:16 +02:00
4e759d6c98
more tests for orientation conversion
...
ensure that all parameters are within range and check if
multidimensional arrays at least run
2020-04-11 12:37:21 +02:00
3bfa2d679c
simpler/correct logic for eu2om
2020-04-11 11:36:37 +02:00
59b0a6e825
tuples not needed/avoid eval
2020-04-10 13:07:05 +02:00
656c0199cf
sorted and make explicitly available what we need
2020-04-10 12:32:33 +02:00
9837390406
do not clutter namespace
...
we do not need damask.util.np etc
2020-04-10 12:30:39 +02:00
9c0ea13e4f
Merge branch 'development' into misc-improvements
2020-04-10 08:14:33 +02:00
bab3581b11
need to transpose eigenvectors to find the correct one
2020-04-09 15:01:01 +02:00
e502573e05
polishing
2020-04-09 14:20:43 +02:00
b025c1838e
simplified
2020-04-09 12:52:12 +02:00
cbfde73a29
more testing and related fixes
2020-04-09 07:40:20 +02:00
43e7639f77
WIP: implementing orientation matrix conversions
2020-04-09 00:47:43 +02:00
da30fb8396
qu(aternion) and eu(ler) vectorized and tested
2020-04-09 00:35:40 +02:00
464620b796
vectorized conversion from ax(is angle)
2020-04-08 21:24:59 +02:00
2a063b3bb5
relaxed tolerance not needed
2020-04-08 20:23:05 +02:00
59e0041fd7
more scatter, slightly reduced tolerance
2020-04-08 19:30:50 +02:00
3cd8f3d9a0
testing special orientations with scatter
2020-04-08 18:38:57 +02:00
1ba01ba0db
adjusting tolerances
2020-04-08 18:15:50 +02:00
f365ae104d
adjusting tolerances
2020-04-08 17:55:05 +02:00
10d5b2e791
testing some special cases
2020-04-08 13:41:46 +02:00
8f88480790
better readable error messages
2020-04-08 12:59:34 +02:00
b6f5548d8a
correct normalization at the corners
2020-04-08 12:23:28 +02:00
4e06e9a410
improved numerical stability for corner cases
2020-04-08 11:52:26 +02:00
ccf62ede52
bugfix for Cubochoric
...
forward and backward mappings are different
2020-04-08 11:41:42 +02:00
fbd61fda99
ignore comments
2020-04-02 11:54:34 +02:00
01818cba80
tuples not needed for single arguments
2020-03-31 12:44:39 +02:00
6ef7410e5a
testing VTK wrappers
2020-03-31 11:04:06 +02:00
2f52165e0a
for test coverage reports using pytest
2020-03-30 22:14:45 +02:00
396d428af7
bugfix: works for all cuboids, not just cubes
2020-03-29 23:09:43 +02:00
e334674a06
test bycristal tessellation
2020-03-29 20:28:54 +02:00
9c90aa5acb
polishing
2020-03-29 20:07:09 +02:00
e61c1a027b
avoid detour via shell
2020-03-29 19:12:23 +02:00
bbce3456e8
advise from pylint
2020-03-22 22:30:38 +01:00
1dfdd264b7
small flaws detected by pylint
2020-03-22 16:31:14 +01:00
b6d50db177
do not use name of function
2020-03-22 16:21:49 +01:00
1e178287fe
4 space indentation
2020-03-22 16:13:35 +01:00
76caf422aa
bugfix: wrong indentation
...
strange that python has accepted that
2020-03-22 15:59:25 +01:00
3873a3d20d
restoring working structure for config submodule
2020-03-21 22:17:07 +01:00
4decae967a
nothing to inherit ..
2020-03-21 20:18:46 +01:00
c6025925ac
relative imports within damask package
2020-03-21 20:17:50 +01:00
c5e956f386
solver submodule structure working again
2020-03-21 20:14:15 +01:00
bcf3650211
slightly shorter.
...
w/o transpose, this seems to be more memory efficient
2020-03-21 19:40:49 +01:00
71da974bdc
quick prospector fixes for deprecated class
2020-03-21 18:29:42 +01:00
67f64b7a7a
polishing
2020-03-21 18:01:26 +01:00
20a06840b0
works also for arrays ...
2020-03-21 11:07:21 +01:00
2ad86e4202
shortened
2020-03-20 23:47:54 +01:00
eb66db9c36
Merge branch 'no-python-namespace-clutter' into MiscImprovements
2020-03-20 23:46:37 +01:00
76984a4dbd
more sensible check
...
works also for numpy arrays. Not sure why the old way is considered to
be "pythonic", I think it can just cause trouble
2020-03-20 23:42:23 +01:00
4d4f321872
following python convention
2020-03-20 08:49:33 +01:00
0556827f29
less error prone
2020-03-19 20:19:47 +01:00
892b7eee98
consistency check and new test
2020-03-19 17:34:49 +01:00
705694b97c
fix for test
2020-03-19 15:54:57 +01:00
e390982be7
clean first level structure
2020-03-19 15:19:11 +01:00
899cc913c4
python style names
2020-03-19 15:09:05 +01:00
327899890a
this works for internal
2020-03-19 15:06:25 +01:00
9bb0608187
maybe this is the cleaner way
2020-03-19 14:40:30 +01:00
c1d82197ad
cope with integers
2020-03-19 13:27:23 +01:00
0ebc5ab60e
no need to import modules, hide unwanted functions
2020-03-19 13:16:32 +01:00
27532cfa4e
small fixes
2020-03-19 12:03:55 +01:00
91e728d065
polishing
2020-03-19 11:30:36 +01:00
a80622292e
simplified (and working)
2020-03-19 10:59:53 +01:00
7093647af5
clearly show intention
2020-03-19 09:04:36 +01:00
0871111c11
consistent and correct number of leading zeros
2020-03-19 08:45:25 +01:00
b5899b51e1
do not show tk window on start(python) or exit(Ipython)
2020-03-19 08:31:24 +01:00
d6f74daf53
cleaning
...
no DADF5 anymore
2020-03-19 08:13:13 +01:00
fbd92599e8
also accept vtkRectilinearGrid etc as type
2020-03-19 08:04:15 +01:00
6d0c4b9765
typo
2020-03-19 08:00:13 +01:00
d28df815f0
Merge branch 'development' into MiscImprovements
2020-03-19 07:30:03 +01:00
7d47418381
migrating to new Table class ...
...
... and stripping old ASCIItable down
2020-03-19 07:27:11 +01:00
f7a6ac4a0e
migrating to new table class
2020-03-19 07:27:11 +01:00
cbe5944390
cleaning deprecated modules
2020-03-19 07:27:11 +01:00
2b777bbbea
use "None" to indicate missing data
...
True/False are user based decisions
2020-03-18 14:29:59 +01:00
ee0d80ce2a
following python standard + polishing
2020-03-18 13:49:53 +01:00
45e3b8f7c6
no brackets for reshape required
2020-03-17 12:25:44 +01:00
25b3fa4427
image data seems to work in general with python3 ...
...
... after fix for colormaps
imageDataDeformed is based on the core module, i.e. it has not been used
for years. Either update soon or remove
2020-03-17 11:53:59 +01:00
bb90539f7c
only ignore temporary files in the respective folders
2020-03-16 22:50:09 +01:00
794d7e485e
bugfix: report again correctly
2020-03-16 22:50:09 +01:00
941a9fbff4
fixing prospector complaints
2020-03-14 22:56:13 +01:00
554631d554
whitespace adjustments
2020-03-14 22:31:36 +01:00
f9aea736cb
there is a function for that
2020-03-14 22:26:47 +01:00
6dcb5b0d0d
vectorize
2020-03-14 22:24:45 +01:00
0becd8c20b
not needed
2020-03-14 22:21:31 +01:00
b4679fabfc
whitespace cleaning and other polishing
2020-03-14 22:17:59 +01:00
5c4ddf5138
Merge branch 'development' into MiscImprovements
2020-03-14 12:52:30 +01:00
3d8e8cfe7a
tkinter might not work
2020-03-14 00:07:49 +01:00
771663c944
polishing
2020-03-13 00:30:49 +01:00
81e98055dd
polishing
2020-03-12 19:52:33 +01:00
6fbace8220
stub: show rendered geometry
2020-03-12 15:10:44 +01:00
827f354435
only store points, no vertices
...
visualize via 'Points Gaussian', not 'Points' in paraview.
+ adding displacements for points
2020-03-12 12:28:28 +01:00
4c915eddbc
inform the user
2020-03-12 08:30:33 +01:00
dafc48dcc7
polishing
2020-03-12 08:22:37 +01:00
a6a73cdc0f
polishing
...
grid is interpreted again in the DAMASK meaning, i.e it specifies the
number of cells, not the number of nodes
2020-03-12 06:54:40 +01:00
bb2019810a
centralizing functionality
2020-03-12 00:00:47 +01:00
575da581a9
support for point cloud
2020-03-11 22:35:58 +01:00
744e3bb50b
vectorized cell assignment + bugfix for writing out
2020-03-11 21:29:24 +01:00
f324e67f7b
fix: nodes need to be converted to vtk type
...
some stub definitions
2020-03-11 18:08:58 +01:00
c92a6ad459
simpler
...
and system independent
2020-03-11 07:50:11 +01:00
32734e7dce
using central functionality
2020-03-11 07:42:32 +01:00
b3e8a4405e
better use centralized functionality
2020-03-11 06:50:13 +01:00
a024ec378a
new class should be accesible as damask.VTK
2020-03-11 06:49:14 +01:00
9878ddc550
easier way to show data.
...
needs information on geometry (structured/unstructured) and probably we
should list not more than 5 incs
2020-03-11 06:28:13 +01:00
8a4bc3dda4
separating vtk from results
...
we should discuss the naming!
2020-03-10 23:53:37 +01:00
c43af6aac3
Merge branch 'development' into HDF5-results
2020-03-10 23:32:41 +01:00
a7f5e42c2e
condensed if-else
2020-03-10 22:13:21 +01:00
bffce1ab9c
use "nan" to represent np.nan in ASCIItable output
2020-03-09 18:50:27 -04:00
b2abaef0b3
added placing of data within geometry
2020-03-09 18:31:00 -04:00
9bfaf4fbfb
it is RodriGues, not RodriQues
2020-03-09 13:58:10 +01:00
32378fa609
simpler use of progress bar
...
now written as class (avoids the managing of function attributes) which
is used as a small wrapper around a loop.
ETA is shown, based on datetime class which hast nice formatting
2020-03-09 13:44:08 +01:00
20caa29b5d
corrected "Rodrigues"
2020-03-06 00:53:11 +01:00
7a0c20b6de
Merge branch 'development' into python-style
2020-03-05 22:00:58 +01:00
c06ef00fe2
[skip ci] N_threads is not correct, we use processes
2020-03-03 14:57:48 +01:00
16b4a63c58
clearly separating deprecated functions
...
still there since some test rely on them
2020-03-03 14:38:32 +01:00
946231cda5
indentation adjustment
2020-03-03 14:24:27 +01:00
903af10aa7
allow to iterate over times/increments
2020-03-03 14:07:02 +01:00
c33cca3351
polishing, takeover from dadf5-usability branch
2020-03-03 12:50:10 +01:00
1f3d5099cf
quote still needed
2020-03-03 12:32:38 +01:00
b1f21b189b
removing unused functionality
...
should simplify transition to new table class
2020-03-03 08:28:57 +01:00
c360785217
single source of truth
2020-03-03 08:04:14 +01:00
edd143b423
bugfix for copy and paste error
...
introduced in 8798dd1af3
2020-03-03 07:00:14 +01:00
192f21df37
4 space indentation
2020-03-03 06:49:46 +01:00
88e8907031
deprecated and not used by any test
2020-03-02 23:52:40 +01:00
8798dd1af3
new names consistently used
2020-03-02 23:47:29 +01:00
00028724b8
type is float for empty element in prod, should always be int
2020-03-02 23:20:36 +01:00
0034289b1b
S is 2. PK stress, T_sym is clearer
2020-03-02 23:14:59 +01:00
15c3cab549
clearer names
2020-03-02 23:11:05 +01:00
4970f22e13
better name
...
damask.Result is more appropriate then damask.DADF5
2020-03-02 23:05:35 +01:00
08aef5531c
Merge remote-tracking branch 'origin/development' into MiscImprovements
2020-03-01 07:32:00 +01:00
ed2489de9a
not needed anymore
2020-02-29 19:57:37 +01:00
f431dd2092
geom class is better suited than asciitable class
...
removing unused functionality from deprecated asciitable
2020-02-29 19:31:27 +01:00
334eb93421
infere data type automatically
...
need for IPF color autput
2020-02-27 21:19:56 +01:00
75528064e9
Merge branch 'development' into DADF5-multiprocessing
2020-02-25 17:58:07 +01:00
1683e18c1f
keep order
...
mainly relevant for increments
2020-02-25 11:53:02 +01:00
f256493e79
fixed indentation
2020-02-22 01:05:02 +01:00
9d4cbe5168
4 space indentation
2020-02-22 00:19:27 +01:00
fd11f073f0
fixing prospector complaints
2020-02-22 00:11:00 +01:00
a6279c8284
use separate test definitions per class
2020-02-22 00:03:54 +01:00
be45d62f53
polishing
2020-02-21 23:59:33 +01:00
dc9bfd1849
Merge branch 'DADF5_point_calculations-2' into DADF5-multiprocessing
2020-02-21 23:57:22 +01:00
12c69ed3ca
Merge branch 'DADF5_point_calculations-2' of magit1.mpie.de:/damask/DAMASK into DADF5_point_calculations-2
2020-02-21 23:56:56 +01:00
f20a82ce6d
migrate name: damask.Result better than damask.DADF5
2020-02-21 23:56:18 +01:00
1dddfa040e
adjusting indents
...
should be always 4 spaces
2020-02-21 23:25:22 +01:00
f604314207
polishing
2020-02-21 23:16:25 +01:00
e9bf02a52c
one underscore commonly denotes internal functions
2020-02-21 21:37:02 +01:00
0774e12169
report progress
2020-02-21 21:27:08 +01:00
c2ae657f5b
arguments should be documented
2020-02-21 21:04:23 +01:00
0358e7343b
polishing
2020-02-21 19:39:17 +01:00
05476ff85c
parallelize addition of datasets
...
threads does not work, muliprocessing shows good performance: Overhead
is small compared to the performance gain.
Especially useful for long running functions of the orientation class
2020-02-21 19:25:37 +01:00
b9966b95e0
consistently use small letters
2020-02-21 18:52:58 +01:00
ffb80981b1
use central functionality
2020-02-21 17:49:17 +01:00
6a0760a13c
documentation polishing
2020-02-21 17:42:01 +01:00
a433f7ef54
style unification
...
backport from dadf5-usability branch
2020-02-21 13:03:50 +01:00
16ddd9c5b2
better name
...
backport from dadf5-usability branch
2020-02-21 12:20:42 +01:00
58610e23a7
use 4 space for indentation
2020-02-21 10:53:44 +01:00
c84a6e90c9
no 'dangling' functions
...
@staticmethod is what we need here
2020-02-21 10:45:14 +01:00
c1caef4bc9
fixing prospector complaints
2020-02-21 08:13:10 +01:00
98f5c601a3
line too long
2020-02-21 07:58:10 +01:00
f6c921e811
Merge branch 'development' into DADF5_point_calculations-2
2020-02-21 07:56:19 +01:00
8ae3346bd4
constituents/components are not handled by "view" (active)
2020-02-21 07:46:55 +01:00
c3740b4ba0
follow 4 space indentation convention
2020-02-21 07:45:05 +01:00
effaef46db
simplified interface
2020-02-21 07:39:53 +01:00
9beca6488c
more verbose description
2020-02-21 07:21:45 +01:00
1e1cb3f151
avoid long modules
2020-02-20 23:29:12 +01:00
5ce143e36e
numpy is already imported
2020-02-20 23:17:54 +01:00
898c696ef7
avoid long modules
2020-02-20 23:16:35 +01:00
16ed0623af
4 space indentation (as suggested by PEP)
2020-02-20 23:10:38 +01:00
a670ab269f
proper spacing
2020-02-20 22:50:54 +01:00
a608310920
correct printing of error messages
...
'{}'.format(np.ones(3)) gives only '1', but we want to see '[1 1 1]'
2020-02-20 18:59:57 +01:00
251d55fe09
current thread pool is useless for performance
...
https://stackoverflow.com/questions/33969151
https://stackoverflow.com/questions/10789042
2020-02-16 11:00:09 +01:00
95cfa3f173
more tests...
2020-02-16 10:04:33 +01:00
065fc9ffde
using DAMASK_NUM_THREADS controls # workers for add_XXX
2020-02-16 09:49:55 +01:00
36c1744a59
proper indentation
2020-02-16 09:21:21 +01:00
a70721df53
write out proper Miller indices
2020-02-15 20:09:24 +01:00
5235c27ad0
making new mechanics functions available for DADF5
...
+ testing them
2020-02-15 17:56:20 +01:00
118c03c485
tests for new functionality
2020-02-15 16:59:30 +01:00
ad062ada6b
option (as in addSpectralDecomposition)
2020-02-15 16:26:56 +01:00
5822ad8b05
new functions (takeover from old branch)
2020-02-15 15:13:56 +01:00
e46395be41
sorted alphabetically
2020-02-15 14:21:23 +01:00
79533b075e
eigenvalues is more specific name than principal components
2020-02-15 13:56:15 +01:00
c2c84d698f
Merge remote-tracking branch 'origin/development' into MiscImprovements
2020-02-11 17:11:43 +01:00
57c70cd5d5
preparing removal
2020-02-04 00:12:08 +01:00
4999f5aa4d
first steps of removing deprecated
...
use faster, pandas-based alternative 'table'
2020-02-03 21:40:10 +01:00
4c28e7f626
better have tests
2020-02-01 09:44:21 +01:00
4d07ab7519
prospector complained
2020-01-29 16:31:05 +01:00
fa39a7423b
preparing for actual use
2020-01-29 13:20:16 +01:00
5d1f68bf93
Merge branch 'fix-elem-7-57' into noAbaqus
2020-01-27 19:27:53 +01:00
ed9347e9bd
more robust:
...
* split(maxsplit=1) will raise ValueError if split into two strings is not
possible
* int('a') will raise ValueError if 'a' cannot be interpreted as an
integer
2020-01-26 10:34:30 +01:00
6fed655500
fix for new style and test
2020-01-26 10:17:27 +01:00
7f92418fc4
shapes should also match
2020-01-26 10:01:00 +01:00
13107abd39
not working and significat efforts needed to test it
2020-01-26 07:44:22 +01:00
bfe8585903
Merge branch 'development' into MiscImprovements
2020-01-24 20:08:14 +01:00
54d1c35c45
Merge branch 'development' into python-module
2020-01-24 08:42:28 +01:00
ce03d9f30a
play it safe
2020-01-21 17:38:08 +01:00
5b63779e5c
bugfix:
...
Wrong order of arguments resulted in wrong visualization
2020-01-21 14:37:42 +01:00
9f61b0d34a
not needed,
...
pd.DataFrame can handle that
2020-01-21 07:14:43 +01:00
74927d9622
np.prod(()) is 1.0 (float), casting is therefore needed
2020-01-20 16:05:07 +01:00
e3d35b41b4
bugfixes: invalid python code
2020-01-20 13:06:32 +01:00
b23479bfc9
Merge remote-tracking branch 'origin/development' into MiscImprovements
2020-01-20 12:51:41 +01:00
757dc4e234
new style table
...
no header, comments given by '#': Very standard format, we just take
care of multidimensional columns via special label notation
2020-01-20 12:51:09 +01:00
701a9b18cc
Merge remote-tracking branch 'remotes/origin/marc-improvements' into development
2020-01-18 12:21:24 +01:00
87767f0cc2
Merge branch 'no-python-quaternion' into 'development'
...
No python quaternion
See merge request damask/DAMASK!122
2020-01-15 22:52:55 +01:00
dd70b38d46
detour via numpy array unified datatype
2020-01-15 14:15:57 +01:00
ce47e18e5c
not needed for integer arrays
2020-01-15 13:45:05 +01:00
2ba0752b71
ensure that symmetrically equivalent rotations have the same IPF color
2020-01-14 23:56:52 +01:00
2bc93b643a
testing IPF color values for cube
2020-01-14 23:17:47 +01:00
8a674d0279
2 bugfixes:
...
- mixed up other and me when removing quaternion class
- 1000 random orientations are enough for testing
2020-01-14 22:30:08 +01:00
9d1c1fdb92
enforce Re(q) > 0
2020-01-14 11:33:18 +01:00
18d6d364ec
adjustment to tolerances
...
Rodrigues test is 'prone' to fail due to diverging tangens(pi/2).
Happens only with a very low chance
2020-01-14 10:57:50 +01:00
3afc011a58
fix for untested functionality
...
thanks to prospector
2020-01-14 10:34:13 +01:00
06fc374359
avoid overhead
...
length of random quaternion is one, no need to go via fromQuaternion but
direct initialization and standardization suffices
2020-01-14 10:22:51 +01:00
8e5aa60f34
fixed (and polished) printing
2020-01-14 09:37:59 +01:00
9509f1bae1
default abaqus is used if version matches or is undefined
...
other changes do not alter behavior, just cleaning
2020-01-14 09:15:38 +01:00
26c242b997
not needed anymore
...
conceptually, having the quaternion class is nice but performance-wise
it is a nightmare and prevents vectorization
2020-01-14 09:03:50 +01:00
99684c3e86
Merge branch 'vectorized-orientation-conversion' into no-python-quaternion
2020-01-14 09:02:43 +01:00
3fc616bc7d
Merge branch 'development' into vectorized-orientation-conversion
2020-01-14 09:00:10 +01:00
af42eae9c1
Merge branch 'development' into python-module
2020-01-14 08:58:19 +01:00
c7e92c672d
avoid code duplication
2020-01-14 07:30:17 +01:00
ecb8510217
leaner (and hopefully faster) code
2020-01-14 05:32:42 +01:00
86f27df0b2
damask.Environment reads from os.environ; python module is packaging-ready
2020-01-13 17:28:28 -05:00
f7d0b75f06
Merge branch 'development' into marc-improvements
2020-01-13 22:06:52 +01:00
edbee3a419
Merge branch 'development' into python-module
2020-01-13 15:24:08 -05:00
7b3015c6bd
relaxed tolerances.
...
one out of multiple thousand tests failed ...
2020-01-13 18:44:50 +01:00
47bcdfc22c
[skip sc] vtk output working and tested
...
need to check syntax check because ifort 17.0 has problems with new
mesh. Works, however, with Intel 17.8
2020-01-13 11:53:37 +01:00
76d0383c2f
Merge branch 'MoreImprovements' into marc-improvements
2020-01-13 10:04:27 +01:00
bd4db68a12
support for non QUAD cell type
2020-01-13 10:03:13 +01:00
f9772a3df8
more descriptive name
2020-01-13 02:51:49 +01:00
26442ee783
bugfixes
...
missing import/outdated test
2020-01-12 19:35:45 +01:00
70b73762ed
avoid warning due to change in default parameter
2020-01-12 19:21:16 +01:00
19e88df571
polishing
2020-01-12 07:53:41 +01:00
1315029196
do not clutter comments
2020-01-12 02:06:53 +01:00
1bb94f03b8
polishing (prospector was complaining)
2020-01-12 00:21:14 +01:00
97ddd56540
avoid strange deformation gradients
...
otherwise, the test fails in a few cases (determinants were in the range
1e-5 to 1e16)
2020-01-11 23:44:11 +01:00
3938f34978
Merge branch 'MiscImprovements' into MoreImprovements
2020-01-11 22:37:41 +01:00
2d9c25f8e5
Merge branch 'development' into MiscImprovements
2020-01-11 20:34:35 +01:00
300f1b7015
added options to return "natural" versions of asQ, asRodrig, and asAxisAngle
2020-01-11 11:36:22 -05:00
09f42a3991
ang files might have more columns
2020-01-08 15:34:21 +01:00
385085de73
correct names for numpy (differ from math)
2020-01-04 01:05:40 +01:00
e692118ec5
easier to use for single output label
2020-01-03 15:41:15 +01:00
b5e4e42505
splitext includes leading dot
2020-01-03 14:44:31 +01:00
49f3de44b9
limit import statements (numpy already in use)
2020-01-02 18:02:13 +01:00
97e7f510e2
wrong time was reported in case of trailing inactive increments
2020-01-02 16:27:42 +01:00
f5c58517a7
enable one grid point along all directions
2019-12-24 15:59:09 +01:00
aec9c601d6
some insights from continuum mechanics formulated as test
2019-12-23 15:34:13 +01:00
60580cc45a
mixed up left/right stretch tensor
2019-12-23 07:16:50 +01:00
2cb3213e37
improvements to Table class
...
- string comparison should be '!=' not 'is not', latter compares
object, not value
- functions for common operations: append (vstack, growTable) and join
(hstack, addTable)
2019-12-22 22:21:32 +01:00
48c21045d7
centralized functionality for ang import
2019-12-22 14:57:57 +01:00
e08b096f08
just to make sure ...
2019-12-21 23:43:56 +01:00
a7d60dc52a
not used anymore
...
geom class has own report function
2019-12-21 19:10:41 +01:00
5b7139dc22
using specialized class
2019-12-21 19:09:28 +01:00
6989679d3b
using central functionality
...
- Table class for table data
- grid_filters for grid related functions
2019-12-21 19:03:36 +01:00
2cd2d6f506
cell_2_node/node_2_cell work only for periodic data
...
hence, coordinates and displacements cannot be converted easily
2019-12-21 18:07:04 +01:00
3bf9a4deb5
Merge branch 'grid-filters' into MiscImprovements
2019-12-21 17:39:39 +01:00
503626473a
bugfix: wrong grid order
...
for x fast, z slow, the shape of the array needs to be reversed
2019-12-21 17:38:16 +01:00
0d1ff72c45
Merge branch 'grid-filters' into MiscImprovements
2019-12-21 06:57:38 +01:00
f0d3b29b82
Merge branch 'development' into MiscImprovements
2019-12-21 06:53:56 +01:00
2c5f7d3b5a
Merge branch 'development' into grid-filters
2019-12-20 14:32:20 +01:00
Martin Diehl