Commit Graph

1801 Commits

Author SHA1 Message Date
Martin Diehl 0e4dede606 slowly approaching style of phenopowerlaw 2018-12-18 09:52:13 +01:00
Martin Diehl 63c417fbe0 failed if dataset does not exists
empty datasets are not written out
2018-12-18 08:44:11 +01:00
Martin Diehl 27322847a4 reporting command line call 2018-12-17 21:30:30 +01:00
Martin Diehl d00154299b missing information on increment cause HDF5 error
mistook write() statement with a left-over debug message
2018-12-17 20:13:45 +01:00
Martin Diehl 3f3e23c2c8 polished addAttribute and use it to store meta data 2018-12-17 16:15:16 +01:00
Martin Diehl b2062f2a12 label were stored including [] and comments 2018-12-17 16:11:01 +01:00
Martin Diehl 36c7157ee9 vectorized 2018-12-17 08:33:46 +01:00
Vitesh Shah 3e38c4ef8c The attribute interface works for single processor output and single valued attribute 2018-12-15 17:21:03 +01:00
Vitesh Shah d2c7b33cf6 New files made nonexecutable 2018-12-14 11:39:08 +01:00
Vitesh Shah 669d0c6c8f made it nonexecutable 2018-12-14 11:37:44 +01:00
Vitesh Shah 7e41ae264d Made changes with the calling signature 2018-12-14 11:35:41 +01:00
Martin Diehl 4dd064a275 polishing 2018-12-14 09:23:52 +01:00
Martin Diehl 25bd6faf7c left over "if" caused wrong coordinate systems for hex 2018-12-14 06:39:49 +01:00
Martin Diehl 85f1368480 Merge branch 'development' into NewStyleKinematicHardening-2 2018-12-14 06:21:08 +01:00
Martin Diehl 8bea82c72f Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-12-14 05:49:34 +01:00
Martin Diehl 4edaab6da6 definition of cleavage systems did not work
bct definition was overly complicated
2018-12-13 11:11:45 +01:00
Martin Diehl 3352cbac4b segmentation fault
expected instance but passed in phase
2018-12-13 10:51:35 +01:00
Martin Diehl 20671b8ed3 cleaning 2018-12-13 09:51:43 +01:00
Martin Diehl 416d3411c1 leaner APIs 2018-12-13 09:34:40 +01:00
Martin Diehl 98cc79d629 ph not needed any more 2018-12-13 09:14:57 +01:00
Martin Diehl d99778dd96 further cleaning 2018-12-13 08:43:26 +01:00
Martin Diehl a7351deab0 simplified 2018-12-13 08:36:01 +01:00
Martin Diehl 6b5131e0f3 no need to have as a separate state 2018-12-13 07:06:12 +01:00
Martin Diehl dfafddec57 simplifying 2018-12-13 06:59:56 +01:00
Martin Diehl 2aa6b12126 IMPORTANT Behavior change: Slip (Lp) happens in twinned volume fraction
aliases for associate do not have to be defined
2018-12-12 16:13:57 +01:00
Martin Diehl 3bab08fdeb Merge branch 'development' into 56-parallel-hdf5 2018-12-12 07:46:02 +01:00
Martin Diehl fd2d4d856b cleaned + suggested structure to write data 2018-12-12 07:45:20 +01:00
Martin Diehl cb28d10d79 dummy structure to write plasticity results 2018-12-12 06:40:57 +01:00
Martin Diehl 1446e9f4ab polished
sanity checks + documentation
2018-12-12 00:30:20 +01:00
Martin Diehl bf2b074787 make parameters obvious 2018-12-11 23:11:59 +01:00
Martin Diehl c29240c1c8 forestprojection can be calculated centrally 2018-12-11 23:00:56 +01:00
Martin Diehl ef23095332 using function for cleavage system definition
only internally since damage related constitutive laws will be
re-written anyway
2018-12-11 08:03:40 +01:00
Martin Diehl 754e5a960b polishing
sometimes gives segmentation fault/division by zero.
probably the usual problem of dislotwin when running without friction
coefficient B
2018-12-11 07:22:48 +01:00
Martin Diehl 1bcf41100d [skip ci] WIP: cleaning
contains a few bugs
2018-12-11 07:05:37 +01:00
Martin Diehl ee60ce0d98 further simplifications 2018-12-11 01:35:36 +01:00
Martin Diehl 2fac481a26 polishing/sorting 2018-12-11 00:39:50 +01:00
Martin Diehl cee905443b cleaner and safer
- use functions from lattice instead of repeating code
- sanity check for twin nucleation
2018-12-10 08:34:24 +01:00
Martin Diehl 51d8011afe cleaned
- only define variables that are needed
- define variables where they are needed
2018-12-10 08:33:20 +01:00
Martin Diehl efbd50c931 parameters in bold allow easy distinction 2018-12-10 05:52:36 +01:00
Martin Diehl 0f106e77d9 cleaning 2018-12-09 22:20:18 +01:00
Martin Diehl 95826d094c not needed anymore 2018-12-09 22:00:04 +01:00
Martin Diehl 1b571d33a7 using trans-trans interactions from lattice 2018-12-09 21:10:14 +01:00
Martin Diehl 8424ba76ac never used 2018-12-09 20:54:49 +01:00
Martin Diehl 132f417dee Merge remote-tracking branch 'origin/development' into 44-column-major-access-to-interaction-matrices 2018-12-09 20:33:28 +01:00
Martin Diehl 6256de8785 re-implemented sanity checks 2018-12-09 17:53:20 +01:00
Martin Diehl aa9cacdcb0 naming as in dislotwin+phenopowerlaw 2018-12-09 17:36:01 +01:00
Martin Diehl 9e03aae3bf vectorized 2018-12-09 17:35:48 +01:00
Martin Diehl ddecacb172 ready for vectorization 2018-12-09 16:35:28 +01:00
Martin Diehl accd39b27f structuring 2018-12-09 15:58:51 +01:00
Martin Diehl e0cd88d98a preparing for vectorization 2018-12-09 15:38:02 +01:00
Martin Diehl a0b389776d same structure as for dislotwin 2018-12-09 15:00:37 +01:00
Martin Diehl 331a2b9b78 simplified 2018-12-09 14:49:08 +01:00
Martin Diehl 89b054e67b ordered 2018-12-09 14:29:19 +01:00
Martin Diehl 58862a939d initial handling of symmetry introduced 2018-12-08 15:54:59 +01:00
Martin Diehl 5d6faff4d6 moving nice initializers to orientation 2018-12-08 15:44:00 +01:00
Martin Diehl ccdf1e5e8e polishing 2018-12-08 13:49:42 +01:00
Martin Diehl c1e5f66d77 make quaternion accesible
output as usual array to completly hide the internal representation
2018-12-08 13:03:27 +01:00
Martin Diehl 9686014ce0 polishing 2018-12-08 12:52:52 +01:00
Martin Diehl 5cdd603671 dummy orientations module
needs to be extendend to include symmetry
2018-12-08 11:40:27 +01:00
Martin Diehl 40d38ebf55 added rotation conversions
modified versions from 3Drotations code (available on GitHub) by Marc De Graef
2018-12-08 08:02:55 +01:00
Martin Diehl 5768356642 PGI compatible 2018-12-06 01:12:15 +01:00
Martin Diehl 72304638f9 PGI fails if optional argument is not present 2018-12-06 00:43:32 +01:00
Martin Diehl 0ed1bd11bd need to write out total increments
otherwise, group/folder of the same name would exist
2018-12-05 13:54:56 +01:00
Martin Diehl deedbc4fda standard conforming line continuation 2018-12-05 08:59:32 +01:00
Martin Diehl 49af6c70a7 PGI compiler complained about kind mismatch 2018-12-05 08:56:26 +01:00
Martin Diehl adffe41ffe writing group structure in file root 2018-12-05 00:05:43 +01:00
Martin Diehl ecb00af147 cleaning and separating functions 2018-12-04 23:09:25 +01:00
Martin Diehl 8f26fc9358 Merge remote-tracking branch 'origin/development' into 56-parallel-hdf5 2018-12-04 22:34:29 +01:00
Martin Diehl 9caa91ee14 polishing 2018-12-04 22:30:07 +01:00
Martin Diehl a34e27cfcd dependentState is more descriptive than microstructure 2018-12-04 21:53:22 +01:00
Martin Diehl 10445606ba simplified API + general polishing 2018-12-04 21:33:32 +01:00
Martin Diehl 3afb14bea1 simplified 2018-12-04 21:05:34 +01:00
Martin Diehl 0a02939138 vectorized 2018-12-04 20:50:02 +01:00
Martin Diehl 91a2748131 simplifying 2018-12-04 20:33:28 +01:00
Martin Diehl e604a3d9cc simplified 2018-12-04 00:09:11 +01:00
Martin Diehl 49b5271ca4 simplified 2018-12-03 11:25:29 +01:00
Martin Diehl fb651e24ef same structure as in phenopowerlaw 2018-12-03 10:48:37 +01:00
Martin Diehl 4b8f150731 Merge branch 'development' into 22-NewStyle_disloUCLA-2 2018-12-03 06:54:52 +01:00
Martin Diehl 17716b4fa7 Merge branch 'NOSlipFCC' into development 2018-12-03 06:35:29 +01:00
Vitesh Shah 801e472497 Made it non-executable 2018-11-30 17:34:26 +01:00
Vitesh Shah e3d8022776 Read and write works for all types of data in parallel with test module passed 2018-11-30 17:33:30 +01:00
Vitesh Shah 508d6cf9ef After merge 2018-11-30 15:25:58 +01:00
Martin Diehl bbba201362 simpler API 2018-11-30 10:38:05 +01:00
Vitesh Shah ab59274c35 Able to read the independent datasets (outside the groups) in parallel 2018-11-30 10:16:04 +01:00
Martin Diehl f02fa9b7b0 no need to parse the file 2018-11-30 08:36:56 +01:00
Martin Diehl 4e86d239de simplified 2018-11-30 08:25:23 +01:00
Martin Diehl c4df2eeac4 no need to know the phase id 2018-11-30 08:02:28 +01:00
Martin Diehl 47e32b39b9 avoid unallocated array for elasticity only 2018-11-30 07:27:23 +01:00
Martin Diehl 0ea5b58338 Merge remote-tracking branch 'origin/development' into 44-column-major-access-to-interaction-matrices 2018-11-29 11:00:36 +01:00
Martin Diehl 0387486a52 same name as in dislotwin 2018-11-29 10:37:06 +01:00
Martin Diehl 39c1df7542 further simplifications 2018-11-29 10:31:02 +01:00
Martin Diehl bbddb2558c cleaning 2018-11-29 09:22:56 +01:00
Martin Diehl 64e9c7fb77 mean free path and threshold stres don't have to be part of the state 2018-11-29 09:10:22 +01:00
Martin Diehl 28ec50a6a9 simpler reading in 2018-11-29 08:44:31 +01:00
Martin Diehl 252f1a6a75 invlabmdaslip does not need to be stored 2018-11-29 08:32:15 +01:00
Martin Diehl 228ef831f0 cleanding
dependentState/microstructure don't need to be part of the complex state
handling
2018-11-29 08:14:20 +01:00
Martin Diehl 9aec5f6db0 shorter notation 2018-11-29 07:27:35 +01:00
Martin Diehl c0663b9fba storing per family makes loops obsolete 2018-11-29 00:04:01 +01:00
Martin Diehl 5dc696c24e calculating Lp is simple if appropriate data structures are used 2018-11-28 22:40:29 +01:00
Martin Diehl 0649eafded simpler way of Lp calculation 2018-11-28 22:22:13 +01:00
Martin Diehl b917ae2cca function to initialize absolute tolerance for state not needed 2018-11-28 17:12:06 +01:00
Martin Diehl 5983496c35 get output from config module 2018-11-28 16:45:45 +01:00
Martin Diehl 6af633aa28 going towards the new API (ipc,ip,el not of interest) 2018-11-28 07:18:50 +01:00
Martin Diehl b923839b1d no need for conversion 33<->6 2018-11-28 06:44:32 +01:00
Martin Diehl 6e22a76a91 parameters from old 22-NewStyle branch 2018-11-28 06:24:58 +01:00
Martin Diehl e4c801d635 introducing parameter structure 2018-11-27 20:00:45 +01:00
Martin Diehl e305e99541 cleaning 2018-11-27 19:49:04 +01:00
Martin Diehl 6c23e9feb8 be lazy, use a function 2018-11-27 19:28:00 +01:00
Martin Diehl 01bc945579 avoid code duplication 2018-11-27 19:19:36 +01:00
Martin Diehl 87b7569eb5 preparing use of kinetics function 2018-11-27 19:01:55 +01:00
Martin Diehl d06dbf2e47 don't need to repeat code 2018-11-27 18:53:01 +01:00
Vitesh Shah d33df38b42 made it non-executable 2018-11-27 18:52:54 +01:00
Vitesh Shah 0265732e08 Parallel writing and reading of integer datasets working 2018-11-27 18:50:51 +01:00
Martin Diehl d89dc6cc00 preparing for the use of kinetics 2018-11-27 18:41:33 +01:00
Martin Diehl d451a3a7a0 calculation of shearrates etc in one function 2018-11-27 18:25:06 +01:00
Martin Diehl bfad81848a kinetics similar to phenopowerlaw 2018-11-26 22:36:32 +01:00
Yi-Chin Yang c13b9718f6 Merge remote-tracking branch 'origin/development' into NOSlipFCC 2018-11-26 16:10:14 +01:00
Vitesh Shah ef1e9cce0d Functionality to avoid creating datasets in HDF5 of zero dimensions 2018-11-26 15:38:31 +01:00
Martin Diehl cf4a0a69fd Intel compiler detected use of unallocated variable
bug was in for a while
2018-11-26 09:15:44 +01:00
Martin Diehl c63d297145 copied from phenopowerlaw 2018-11-26 07:10:43 +01:00
Martin Diehl 8f59a40f48 using new parameter structure for output 2018-11-26 01:34:38 +01:00
Martin Diehl 4c46f3daa5 adopting argument parsing to Phenopowerlaw 2018-11-26 00:14:27 +01:00
Martin Diehl 9f81fa8e9a prevent segmentation fault
post_results better readable
2018-11-25 21:39:59 +01:00
Martin Diehl 6f93f8de04 starting to introduce parallel structure for new style parameter reading 2018-11-25 19:37:46 +01:00
Martin Diehl 2b9a34eac4 Merge remote-tracking branch 'origin/development' into 20-NewStyleDislotwin 2018-11-25 17:12:26 +01:00
Martin Diehl 7cc2892e64 no need to calculate twinned volume fraction as state 2018-11-25 16:14:46 +01:00
Martin Diehl 8a253856f1 no need to perform the state integration 2018-11-25 15:38:14 +01:00
Martin Diehl 8ccec40e35 Merge remote-tracking branch 'origin/development' into 19-NewStylePhenopowerlaw 2018-11-25 13:39:34 +01:00
Martin Diehl 1808b37357 can be easily computed during postprocessing 2018-11-25 11:17:12 +01:00
Martin Diehl 917453d191 polishing 2018-11-25 11:14:09 +01:00
Martin Diehl c0ce95183c can be easily calculated during post processing
and does not have to be a state
2018-11-25 10:59:36 +01:00
Martin Diehl 1d936fc5f2 simple variable rename causes problem with GCC 7.3
probalby a compiler bug
2018-11-24 09:53:18 +01:00
Yi-Chin Yang efe90f86e2 missing comma 2018-11-23 19:00:37 +01:00
Yi-Chin Yang f0359d36b6 adding FCC {110}<110> family 2018-11-23 18:53:50 +01:00
Vitesh Shah e7581f06d9 Fixed error with parallel write 2018-11-23 17:54:02 +01:00
Vitesh Shah 0e55bd6140 started read parallelization but getting errors 2018-11-23 15:49:43 +01:00
Franz Roters 9760b138c2 added link lost during merge 2018-11-23 15:02:35 +01:00
Franz Roters a498e5580a Merge remote-tracking branch 'remotes/origin/54-populate-grains-deprecated' into development 2018-11-23 14:38:22 +01:00
Martin Diehl c7fb868b40 state layout was broken 2018-11-23 07:01:04 +01:00
Martin Diehl 6df68d9428 no need do constantly convert 3x3 matrix <-> 6 vector 2018-11-23 06:04:39 +01:00
Martin Diehl 8b4781cf28 no need to repeat code 2018-11-23 05:37:31 +01:00
Vitesh Shah a6bc2a16f1 Parallel works for groups and included write function for integer data 2018-11-21 19:35:37 +01:00
Vitesh Shah 5cc6d86c61 Added the parallelized functionality for integer datatypes (works for groups?) 2018-11-21 16:57:36 +01:00
Vitesh Shah d00e3105ed Made hdferr < 0 and removed the unnecessary call to h5getspace in hyperslab 2018-11-21 16:10:17 +01:00
Martin Diehl e2e045f75b using 'service function' for allocation of state 2018-11-20 19:46:55 +01:00
Martin Diehl d0be1d61db Merge branch 'development' into 20-NewStyleDislotwin 2018-11-20 19:41:30 +01:00
Martin Diehl ecde7e5953 Merge remote-tracking branch 'origin/development' into 20-NewStyleDislotwin 2018-11-20 19:38:18 +01:00
Martin Diehl baf56a0e94 respect dependencies of inclusion 2018-11-20 15:27:32 +01:00
Martin Diehl 50a1ba6287 hdferr needs to be integer type during compile time of HDF5 library 2018-11-20 15:26:49 +01:00
Vitesh Shah c0481307ee Changed the intent of input argument of dataset to inout 2018-11-20 11:54:51 +01:00
Martin Diehl be8e6cbe57 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-11-19 20:27:10 +01:00
Martin Diehl ba5b623f14 Merge branch 'development' into improved-HDF5 2018-11-18 19:44:36 +01:00
Martin Diehl dd6f6bba9d planning the forwarding of the results 2018-11-18 12:41:05 +01:00
Martin Diehl dfd624e520 create results file 2018-11-18 11:58:49 +01:00
Martin Diehl fb5b1bfd8e compile results module 2018-11-18 11:32:53 +01:00
Martin Diehl 35211a8468 compilation order should reflect dependency 2018-11-18 11:24:55 +01:00
Martin Diehl 366c63e273 CONFIG is a keyword for Cmake 2018-11-18 11:21:43 +01:00
Martin Diehl 8b1785c05c parallel writing for pReal 2018-11-18 09:47:50 +01:00
Martin Diehl 73ca289322 F_aim was wrong in case of MPI parallelization 2018-11-17 16:50:19 +01:00
Martin Diehl d8a425b464 prevent error
h5close_f will give an error if h5open_f was not called.
according to the manual, calling h5open_f multiple time is not a problem
2018-11-17 15:00:51 +01:00
Martin Diehl 89504c3c52 will not work with python3 2018-11-17 08:08:27 +01:00
Martin Diehl d5963b403a setting the property when opening the file 2018-11-16 07:05:43 +01:00
Martin Diehl 9b32fe6dbd MPI file access needed for output 2018-11-15 07:28:34 +01:00
Martin Diehl b48bd3a082 keep only general functionality in HDF5_results 2018-11-15 07:07:59 +01:00
Martin Diehl 58f2a25ffd clearer separation of tasks
1) general HDF5_utilities (for results, restart, ...)
2) results related helpers (based on HDF5_utilities)
2018-11-15 06:49:31 +01:00
Martin Diehl e6c7a73886 first step to include HDF5 in MSC.Marc 2018-11-14 13:12:08 +01:00
Martin Diehl fc5300817d Merge remote-tracking branch 'origin/development' into 42-new-coding-style-for-homogenization-NEW 2018-11-13 23:42:39 +01:00
Franz Roters 174997563e Merge branch '47-save-restart-information-in-hdf5' into 'development'
Resolve "save restart information in HDF5"

See merge request damask/DAMASK!44
2018-11-12 08:42:22 +01:00
Franz Roters 475ca29f3c close all objects of type integer(HID_T) created by native hdf5 routines 2018-11-09 16:11:19 +01:00
Franz Roters 71cb635b10 missing link 2018-11-07 15:13:16 +01:00
Franz Roters e18f39d64c added support for Marc 2018.1 2018-11-07 14:11:10 +01:00
Martin Diehl 7386c6ff9c no need for "use" statements
will be inherited from outer function
2018-11-04 20:16:12 +01:00
Martin Diehl 811a02eb51 better readable 2018-11-04 09:19:24 +01:00
Martin Diehl c863419a0b cleaning 2018-11-04 09:00:35 +01:00
Martin Diehl 7a37ea25f3 cleaning 2018-11-04 08:49:40 +01:00
Martin Diehl 78f4d4c5ee simplified 2018-11-04 08:22:59 +01:00
Martin Diehl ff2b693f1e simplified 2018-11-04 07:56:27 +01:00
Martin Diehl 572576cf88 these functions have no side effects 2018-11-04 07:33:57 +01:00
Martin Diehl 4dc3761fea setting of (random) cluster orientations remove
can be easily done in a pre processing step
2018-11-04 07:29:39 +01:00
Martin Diehl f471911e01 fixed array out of bounds during initialization
happened for inactive homogenization
2018-11-04 07:27:25 +01:00
Martin Diehl 3c11905f63 cleaning 2018-11-03 23:43:25 +01:00
Martin Diehl 8127d85be1 simplifying 2018-11-03 23:13:20 +01:00
Martin Diehl 078729bfa3 using dependent state 2018-11-03 22:43:52 +01:00
Martin Diehl 70998f7f9a cleaning 2018-11-03 22:00:40 +01:00
Martin Diehl 69079b6558 was not used at all 2018-11-03 21:16:36 +01:00
Martin Diehl 0aa21e507a functions only used within updatestate 2018-11-03 21:11:43 +01:00
Martin Diehl c16fdec749 misplaced debug statement
debugging the individual constituents should be done by the constitutive
laws
2018-11-03 21:00:54 +01:00
Martin Diehl 85a2f19b18 wrong averaging 2018-11-03 20:03:23 +01:00
Martin Diehl 0447ea9d74 starting to introduce state pointers 2018-11-03 20:00:02 +01:00
Martin Diehl fdbc20b739 cleaned and unified 2018-11-03 19:29:00 +01:00
Martin Diehl 08c692bfc1 passing in instance simplifies things a lot 2018-11-03 16:40:17 +01:00
Martin Diehl a0c3a65b39 Noutput not needed anymore 2018-11-03 15:41:54 +01:00
Martin Diehl a678e9b94f bugfixes
flaws introduced in 42-xx branch and detected by new test
- outputsize was wrong
- nconstituents is product along the 3 directions, not the sum
2018-11-03 15:13:11 +01:00
Martin Diehl c5b98e544a Merge remote-tracking branch 'origin/development' into 42-new-coding-style-for-homogenization 2018-11-03 11:30:12 +01:00
Martin Diehl f88b78195a not need to repeat shape definition 2018-10-26 10:20:45 +02:00
Martin Diehl c413df7ed2 a little cleaning 2018-10-18 22:54:33 +02:00
Martin Diehl 49c7a6c524 sorting 2018-10-18 22:20:26 +02:00
Martin Diehl f71e067f5e using functionality from lattice 2018-10-18 21:41:17 +02:00
Martin Diehl d7fa3a9791 just sorting 2018-10-18 21:34:26 +02:00
Martin Diehl 59399f2cd2 sanity checks 2018-10-18 19:06:21 +02:00
Martin Diehl 33d816a5d0 polishing 2018-10-17 23:56:57 +02:00
Martin Diehl 121d146a35 using more central functions 2018-10-17 23:20:39 +02:00
Martin Diehl 4320061554 using central functionality 2018-10-17 23:13:47 +02:00
Martin Diehl 8017fccbc3 adjusting to phenopowerlaw 2018-10-17 22:18:33 +02:00
Martin Diehl 2fd348f251 just re-ordering 2018-10-17 21:47:50 +02:00
Martin Diehl 6b4b5b511f don't let dipole formation be undefined 2018-10-17 21:41:21 +02:00
Martin Diehl b7bc5afa90 Merge remote-tracking branch 'origin/development' into 20-NewStyleDislotwin 2018-10-17 20:10:49 +02:00
Martin Diehl 7ac96bd630 polishing 2018-10-17 00:01:21 +02:00
Martin Diehl d92ab04892 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-10-15 22:38:55 +02:00
Martin Diehl be8d7e19fe missing use statement caused compilation error 2018-10-15 22:38:34 +02:00
Martin Diehl 2ca7807438 cleavage systems avaialable as function 2018-10-15 22:29:23 +02:00
Martin Diehl ad1a64c338 rename was missing 2018-10-15 06:01:38 +02:00
Martin Diehl 57ca93c3c9 added missing allocation 2018-10-15 05:28:52 +02:00
Martin Diehl e5ec5ed54c check prerequisites as early as possible 2018-10-15 05:03:53 +02:00
Martin Diehl 767ca0edd4 avoid code repetition 2018-10-14 20:16:30 +02:00
Martin Diehl a311cc7673 Merge remote-tracking branch 'origin/development' into 19-NewStylePhenopowerlaw 2018-10-14 15:53:50 +02:00
Martin Diehl 6599aa487c kinetics_slip does not seem to be the problem 2018-10-14 15:53:24 +02:00
Martin Diehl 1839228add sorting
new mappings. Needs more work (don't forget https://xkcd.com/927)
2018-10-14 12:27:42 +02:00
Martin Diehl 943fa764c0 not needed 2018-10-14 11:15:07 +02:00
Martin Diehl 4ac12d1dc5 removed hybridIA 2018-10-14 10:11:26 +02:00
Martin Diehl 4c780226d1 polishing 2018-10-14 09:27:34 +02:00
Martin Diehl 17c21dfc92 mesh_element should not be used anymore 2018-10-13 18:21:13 +02:00
Martin Diehl 06d71d9d2c Merge remote-tracking branch 'origin/development' into 42-new-coding-style-for-homogenization 2018-10-13 17:27:25 +02:00
Martin Diehl 513faa2218 investigating the reason for the poor performance 2018-10-13 11:29:07 +02:00
Franz Roters d9fbf2ab50 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-10-13 10:52:03 +02:00
Franz Roters 905b5a33eb added link for Marc2018 2018-10-13 10:50:20 +02:00
Franz Roters 1a458108bc added support for Marc2018 2018-10-13 10:26:42 +02:00
Martin Diehl fa9cbe13c9 do concurrent not safe here 2018-10-13 08:35:36 +02:00
Martin Diehl 6207781eb6 [skip ci] [skip sc] streamlining 2018-10-12 17:24:46 +02:00
Franz Roters d1561e867a Merge branch '44-column-major-access-to-interaction-matrices' into 'development'
Resolve "column-major access to interaction matrices"

Closes #44

See merge request damask/DAMASK!43
2018-10-12 13:03:22 +02:00
Martin Diehl 5597ee338e simplifying
- whole type is private, no need to make the components private
- target not needed when using associate
2018-10-12 08:26:24 +02:00
Martin Diehl 854d3ab774 clearer logic for controlling dipole formation 2018-10-12 08:23:56 +02:00
Vitesh Shah 38f9807c42 cleaning up the codes 2018-10-11 18:00:01 +02:00
Martin Diehl 51a3308a3d bugfix: same tau was used for all systems 2018-10-11 17:28:00 +02:00
Vitesh Shah cd2fb9f417 adding prefixes to writing of datasets under groups 2018-10-10 19:08:44 +02:00
Vitesh Shah fa13e71493 removed typo(&) 2018-10-10 18:09:10 +02:00
Vitesh Shah 78db0ecb3c reading and writing of subroutines of datasets of different ranks 2018-10-10 17:54:55 +02:00
Martin Diehl 7217cdac1b Merge branch '29-rename-mesh_element-array' into development 2018-10-10 15:55:23 +02:00
Martin Diehl ef1899cfd0 improved error reporting
- tell user specifically whether number of systems is too high or too
low
- c/a sanity check can be done centrally
2018-10-10 07:42:07 +02:00
Philip Eisenlohr f0b9c0caf7 polishing and encapsulating of Abaqus-specific local variables 2018-10-09 17:57:10 -04:00
Franz Roters 1d0584dcdf typo in message 2018-10-09 16:44:47 +02:00
Martin Diehl d81c9f744e avoid errors by consistently closing objects
general bugfixes, works now
2018-10-09 16:17:21 +02:00
Martin Diehl 2064ed80fd more flexible file open routine 2018-10-09 15:15:08 +02:00
Martin Diehl 8626ba1ce6 adjusted variable names and added comments 2018-10-09 14:46:57 +02:00
Martin Diehl 48403c37b7 initializing and closing the HDF5 library 2018-10-09 14:13:51 +02:00
Martin Diehl e7e0cf7118 preprocessor statements are case sensitive..
... and the PETSc variable is PETSc, not PETSC
2018-10-09 13:57:29 +02:00
Martin Diehl e3943d282a Merge branch 'development' into 47-save-restart-information-in-hdf5 2018-10-09 13:51:58 +02:00
Vitesh Shah 09ba95b029 non-executable 2018-10-09 10:58:45 +02:00
Vitesh Shah 70c746a8f1 Interfacing for subroutines to identify real and integer data 2018-10-09 10:57:06 +02:00
Martin Diehl e71ec2057e hotfix
does not seem to cause trouble here, but better be safe
2018-10-09 08:37:03 +02:00
Martin Diehl 4da3923440 more straight-forward definition of array shape 2018-10-08 23:54:45 +02:00
Martin Diehl 05aae4f7eb removed forgotten debug statement 2018-10-08 23:34:05 +02:00
Martin Diehl 50f0362aa1 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-10-08 23:33:31 +02:00
Martin Diehl 6064daceda do error check earlier
array out of bounds happened already before the check
2018-10-08 23:32:46 +02:00
Martin Diehl b51c3b5a07 handling files without LF at last line correctly 2018-10-08 23:27:06 +02:00
Philip Eisenlohr 225a48021d foramtting of random_seed output to align with rest 2018-10-08 17:01:56 -04:00
Martin Diehl 78b5fa466d fixed hick-up in lattice definitions 2018-10-08 19:32:18 +02:00
Martin Diehl 71d80cc203 sanity check too strong
still makes sense to have, but some tests need to be updated before
setting it active again
2018-10-08 13:27:15 +02:00
Martin Diehl 2a79f7ea61 taking care of c/a for hex and bct 2018-10-08 13:25:40 +02:00
Martin Diehl 5efcad952a avoid type conversion
more systematic checking of correct input parameters
2018-10-08 08:28:56 +02:00
Martin Diehl 302cf9b6c2 bugfix, now inline with code from initializeStructure 2018-10-07 22:16:18 +02:00
Martin Diehl facb1c2407 unified error checking 2018-10-07 20:03:45 +02:00
Martin Diehl 0e17b17b90 using full precision 2018-10-07 18:40:02 +02:00
Martin Diehl 34e0aca564 using full precision 2018-10-07 18:18:24 +02:00
Martin Diehl a53488d666 calculation of slip/twin/trans/damage-coordinate system was wrong 2018-10-07 15:44:13 +02:00
Martin Diehl 032c35a499 WIP: Calculation of elasticity matrices for twin and trans 2018-10-06 10:42:25 +02:00
Martin Diehl 3a2f86df1c non-schmid is always bcc 2018-10-05 23:04:06 +02:00
Martin Diehl 81a77b508a check for array size was off by 1 2018-10-05 22:46:53 +02:00
Martin Diehl 3a39c2d68c [skip ci] strings will be converted to lowercase 2018-10-05 17:54:24 +02:00
Martin Diehl 0cddf36106 typo, using value of p_slip for q 2018-10-05 17:47:46 +02:00
Martin Diehl 2a51e528bd Merge branch 'development' into 44-column-major-access-to-interaction-matrices 2018-10-05 11:11:20 +02:00
Martin Diehl 40cf7f134d Merge branch '44-column-major-access-to-interaction-matrices' of magit1.mpie.de:damask/DAMASK into 44-column-major-access-to-interaction-matrices 2018-10-05 11:08:29 +02:00
Martin Diehl aa34b83978 avoid array out of bounds
allows to handle un- or partly defined non schmid coefficients
2018-10-05 10:36:44 +02:00
Martin Diehl a560fff2ac [skip ci] [skip sc] generic interfaces for HDF5 operations
most existing HDF5 functions are only designed for writing output files
and more general functionality is needed for storing the restart data
2018-10-05 09:03:20 +02:00
Martin Diehl 47a748831f Cannot write out resolved stress including non schmid
Would need to write out tau_pos and tau_neg separately, so limit to
resolved stress in the sense of Schmid
2018-10-05 07:26:13 +02:00
Martin Diehl 6ccbc5e4e6 characteristing shear is defined per system 2018-10-05 07:20:51 +02:00
Martin Diehl e74a852ef7 new style is noticable slower
runtime (polycrystal example) increased from 70s to 90s.
Need to figure out how to write readable AND fast code
2018-10-05 06:38:20 +02:00
Martin Diehl 3a00fcde16 WIP: characteristic shear calculated in lattice 2018-10-05 05:09:31 +02:00
Martin Diehl fda2676365 calculate only if required 2018-10-05 04:54:47 +02:00
Martin Diehl 79b0efc678 also using nonSchmid matrix from lattice 2018-10-04 21:20:42 +02:00
Martin Diehl 35956ce0c8 needs to be multiplikative 2018-10-04 21:06:57 +02:00
Vitesh Shah a6ebdfc1ff Reading and writing not very efficient method 2018-10-04 17:00:24 +02:00
Martin Diehl edb94b8bc9 using the same kinetics for slip everywhere 2018-10-04 16:12:14 +02:00
Martin Diehl 12d053d123 strange parameter caused simulation not to start if not defined
probably a leftover. now only bothers you if twin systems are defined
2018-10-04 14:54:00 +02:00
Martin Diehl f1750b4eef avoiding use of unitialized arrays 2018-10-04 14:51:32 +02:00
Martin Diehl cd7f285686 prevent use of unallocated array
interaction matrices are used even if no slip/twin systems defined
2018-10-04 07:17:00 +02:00
Martin Diehl dc289a278b clearer code
homogenization is defined per element, not per IP
hence, use material_homogenizationAt instead of deprecated
material_homog which pretends a dependency on the integration point
2018-10-04 06:48:33 +02:00
Martin Diehl df473302f4 consistent (and better understandable) names 2018-10-04 06:03:48 +02:00
Martin Diehl f494803c76 fixed tangent calculation 2018-10-03 16:40:40 +02:00
Martin Diehl ec77d4450b checking for required things 2018-10-03 09:17:06 +02:00
Martin Diehl db645efda7 function to calculate nonSchmid matrix 2018-10-03 08:49:23 +02:00
Martin Diehl 103b46ecbb don't repeate code over different plastic_xxx modules 2018-10-03 07:58:02 +02:00
Martin Diehl 89e03be699 also building interactions for slip-twin and twin-slip 2018-10-03 07:51:11 +02:00
Martin Diehl 0cac6ce0d2 allocating to wrong size 2018-10-03 07:36:57 +02:00
Martin Diehl ba383336f5 only one projection matrix required for all (non)schmid projections
following the example from plastic_nonlocal
2018-10-03 07:23:18 +02:00
Martin Diehl d718521890 polishing 2018-10-03 07:13:30 +02:00
Martin Diehl 67c55965e9 segmentation fault, tried LHS with scalar
Nxx per system is stored in LATTICE_yyy_NxxxSYSTEM
Using CAPITALS for parameters improves readbility
2018-10-03 06:45:42 +02:00
Martin Diehl 97d2c2b353 mesh_element(1) has a size of 4
fixed sigsegv
2018-10-02 22:54:44 +02:00
Martin Diehl 740325165d Merge branch 'development' into 20-NewStyleDislotwin 2018-10-02 20:37:11 +02:00
Martin Diehl 0047e6c14c correct calculation of dGdot_dTau
needs to take drag coefficient into account for the derivative
2018-10-02 18:09:57 +02:00
Martin Diehl 9cc3a77e01 mean velocity of dislocation corrected for higher temperatures
- v_wait: obstacle spacing over waiting time (effective velocity)
- v_run:  'true' velocity of a dislocation moving between obstacles
for higher temperatures v_run becomes important and bounds the velocity
2018-10-02 15:56:18 +02:00
Martin Diehl 5d1e648d17 drag coefficient B introduced and read in 2018-10-02 15:25:40 +02:00
Martin Diehl 384a785805 more sevice functions use
still trying
2018-10-01 23:02:31 +02:00
Martin Diehl ff2614b757 using 'service functions' from lattice
get rid of many global array on the long run
2018-10-01 22:48:14 +02:00
Martin Diehl a943940760 Merge branch 'development' into 44-column-major-access-to-interaction-matrices 2018-10-01 22:32:38 +02:00
Martin Diehl 98296a978e Merge branch 'development' into 29-rename-mesh_element-array 2018-10-01 22:29:31 +02:00
Martin Diehl e7b8adadd0 passing in instance and of is much easier
also using always the full Mandel stress tensor to avoid repeated
conversion
2018-10-01 22:14:54 +02:00
Martin Diehl ddfbe19f02 Merge branch 'development' into 20-NewStyleDislotwin 2018-10-01 21:16:11 +02:00
Martin Diehl 27bde05529 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' into 'development'
Resolve "Introduce Rudimentary PETSc based FEM solver"

Closes #38

See merge request damask/DAMASK!41
2018-10-01 21:10:03 +02:00
Franz Roters d5cf7d2144 Merge branch '19-NewStylePhenopowerlaw' into 'development'
Resolve "New coding style for phenopowerlaw"

See merge request damask/DAMASK!39
2018-10-01 16:08:05 +02:00
Martin Diehl 49a4202e26 not needed here 2018-09-29 10:31:45 +02:00
Martin Diehl 14509876d4 error == 0 is normal termination 2018-09-29 09:57:53 +02:00
Martin Diehl 637544509e rewind needed
the file is read twice from beginning to end
2018-09-28 10:06:21 +02:00
Vitesh Shah 8619b49e20 made it nonexecutable 2018-09-28 08:47:00 +02:00
Vitesh Shah 8bd0cb3b25 Made it non executable 2018-09-28 08:45:52 +02:00
Vitesh Shah 6efde5f4ce Combined the dataset creation and writing dataset in single subroutine. Created group for looped writing. 2018-09-28 08:41:29 +02:00
Martin Diehl b141252f1f doing the same things in the same way in both solvers 2018-09-28 08:06:22 +02:00
Martin Diehl d1f614991e merging good style mutually FEM <-> Spectral 2018-09-28 07:49:52 +02:00
Martin Diehl 6780217193 adopted from DAMASK_spectral 2018-09-28 07:25:32 +02:00
Martin Diehl e8f687a99c typo, Abaqus/Marc did not compile 2018-09-27 20:18:37 +02:00
Martin Diehl 822bc4dbbf Merge branch 'development' into 29-rename-mesh_element-array 2018-09-27 20:12:09 +02:00
Martin Diehl 4c057ba529 both solvers can share quit 2018-09-27 20:09:59 +02:00
Chuanlai Liu b391ad304d tensor input/output is of the form 11,12,13, 21,22,23, 31,32,33. Thus row index i is slow, while column index j is fast 2018-09-27 11:53:45 +02:00
Martin Diehl 6509775d41 cleaning
avoiding compiler warnings and confusion of the user
2018-09-27 08:23:30 +02:00
Vitesh Shah 5b52ac91e5 Revert "made it non executable"
This reverts commit 05c784aefc.
2018-09-26 09:28:47 +02:00
Martin Diehl c3380aa9f3 using wrong (uninitialized) stress 2018-09-26 09:22:12 +02:00
Vitesh Shah 2edf8f7f53 Need to commit this before reverting the changes in other files 2018-09-26 09:21:53 +02:00
Vitesh Shah 3408282755 windows and linux editor incompatibility 2018-09-25 16:49:25 +02:00
Vitesh Shah 05c784aefc made it non executable 2018-09-25 16:48:02 +02:00
Vitesh Shah b71896d4b6 writing of multidimensional dataset into hdf5 does not appear as multiple pages in hdfviewer 2018-09-25 16:42:43 +02:00
Martin Diehl ceb385ef39 calcMode not needed for spectral and FEM 2018-09-23 21:31:30 +02:00
Martin Diehl c42eb87a33 using arrays with new names 2018-09-23 20:53:35 +02:00
Martin Diehl 72b87b0a9b better name 2018-09-23 19:58:43 +02:00
Martin Diehl f701910c71 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-23 19:32:19 +02:00
Martin Diehl ebef12e446 syntax errors in declaration 2018-09-23 19:04:17 +02:00
Martin Diehl 67483487ea more descriptive names 2018-09-23 18:50:54 +02:00
Martin Diehl 854d99250c mesh_element(1,:) only used for debug output
set to -1 at the moment to indicate that it is not used.
Re-implementation should be done for MSC.Marc and Abaqus only.
2018-09-23 18:42:49 +02:00
Martin Diehl 4b14cc5560 calcmode only needed for Abaqus and MSC.Marc 2018-09-23 18:06:18 +02:00
Martin Diehl cf6d388a6b consistent order of solver-specific functionality 2018-09-23 17:57:48 +02:00
Martin Diehl 5936397ae7 introducing better names
allows further simplifications as we do not store max and per elem
values any more for number of integration points and number of cell
nodes
2018-09-23 17:37:57 +02:00
Martin Diehl 2fe2c4ca45 leaner syntax with sourced allocation 2018-09-23 17:26:13 +02:00
Martin Diehl 51390b1acf Nelems /= NcpElems only in case of Abaqus/MSC.Marc 2018-09-23 17:05:01 +02:00
Martin Diehl 5814e07021 simplified 2018-09-23 16:55:03 +02:00
Martin Diehl e3f2ad34b2 not needed 2018-09-23 16:32:13 +02:00
Martin Diehl bd60018513 not needed for spectral 2018-09-23 15:57:21 +02:00
Martin Diehl c1b8854132 only needed for commercial solvers 2018-09-23 15:31:19 +02:00
Martin Diehl 4862aca340 grouping solver specific variables for better readability 2018-09-23 15:27:51 +02:00
Martin Diehl db45b7615a drop support for heterogeneous meshes
heterogeneous meshes are neither advisable nor typically used
2018-09-23 15:24:14 +02:00
Martin Diehl 519cd840bd cleaning 2018-09-23 15:19:23 +02:00
Pratheek Shanthraj 109ed4308f change in tabulation order. should now be working correctly 2018-09-23 03:14:23 +02:00
Martin Diehl 9eb318b9bf Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-22 14:54:58 +02:00
Pratheek Shanthraj d9bdf53628 quadrature weights defined twice for some reason 2018-09-22 12:55:23 +02:00
Pratheek Shanthraj ffcadc1d86 use displacements instead of coordinates 2018-09-22 12:54:45 +02:00
Pratheek Shanthraj 4a25520828 removed debug write statements 2018-09-22 12:53:33 +02:00
Pratheek Shanthraj 6c21c60c70 corrected nbasis 2018-09-22 12:53:02 +02:00
Pratheek Shanthraj becd959913 dmda not needed 2018-09-22 12:52:29 +02:00
Pratheek Shanthraj 81ced06393 order --> degree 2018-09-22 12:51:02 +02:00
Pratheek Shanthraj 22c1436af6 working with petsc 3.10 2018-09-22 12:49:56 +02:00
Pratheek Shanthraj c9a4609290 reading in BCs correctly 2018-09-22 12:48:57 +02:00
Martin Diehl 42bc1b468a cleaning+adopting to petsc-3.10 2018-09-22 11:19:08 +02:00
Martin Diehl a95e2b8083 Merge branch 'PETSc3.10' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-22 10:36:31 +02:00
Martin Diehl f590851a78 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-22 10:33:20 +02:00
Martin Diehl 80914470cc most probably pInt and PetscInt is the same 2018-09-22 10:32:26 +02:00
Jaeyong Jung 4ddb8d843c modified DMGetDefaultGlobalSection to DMGetGlobalSection 2018-09-21 14:08:44 +02:00
Jaeyong Jung 9150844c96 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-21 10:13:27 +02:00
Martin Diehl 180105d3ce external statements will not work if interfaces exist
we're currently providing a patch for PETSc with interfaces for all
functions that we use
2018-09-21 08:25:35 +02:00
Martin Diehl ff241ae4a6 only use required includes 2018-09-21 08:19:36 +02:00
Martin Diehl bd9a02bfe2 creating hdf5 file to contain restart information
first quick and dirty implementation to get started. needs polishing and
renaming
2018-09-20 19:42:58 +02:00
Jaeyong Jung abe5c1d825 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-20 09:57:30 +02:00
Martin Diehl b775d5084b more (temporarly) cleaning 2018-09-20 08:26:59 +02:00
Martin Diehl 1545a53ea9 ID do not exist at the moment 2018-09-20 08:00:39 +02:00
Martin Diehl cc262ae198 Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-20 07:29:19 +02:00
Martin Diehl 3e7b80a3ef debug only available if compiled in debug mode 2018-09-20 07:27:12 +02:00
Martin Diehl fc016bbc6e Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-09-20 07:16:03 +02:00
Martin Diehl 310ea62964 only print out the essential information 2018-09-20 06:58:31 +02:00
Martin Diehl fcff6b908a can be easily computed during post processing 2018-09-20 06:40:23 +02:00
Martin Diehl 901355d2ae don't use unnecessarily long names 2018-09-20 06:27:53 +02:00
Martin Diehl df0464c31b use (import) debug variables only when needed 2018-09-20 06:24:03 +02:00
Martin Diehl 6aa4dd842a define debug variables only if needed 2018-09-20 06:09:02 +02:00
Martin Diehl 1623a33b48 cleaning (mainly OMP FLUSh) 2018-09-19 21:46:26 +02:00
Martin Diehl 191ad9df09 not used 2018-09-19 20:40:35 +02:00
Martin Diehl 1bf1e13b46 some debug statements 2018-09-19 20:23:28 +02:00
Martin Diehl e7e959af47 using explicit interface from PETScDT 2018-09-19 20:06:35 +02:00
Martin Diehl 11d4c28d88 flushes not needed + further cleaning 2018-09-19 19:45:57 +02:00
Martin Diehl b84476e681 cleaning and debugging 2018-09-19 18:33:37 +02:00
Martin Diehl c313dc1675 only read access 2018-09-19 17:04:12 +02:00
Martin Diehl 0bf64645a1 should be done by the plasticity laws (for the moment) 2018-09-19 14:22:35 +02:00
Martin Diehl a8fb7d7ade not needed
but I'm under the impression that the compiler removes such things anyway
2018-09-19 14:21:10 +02:00
Martin Diehl 20f0bee459 fallback dPdF not needed
save a lot of memory
2018-09-19 06:19:40 +02:00
Martin Diehl 18db5f5652 not needed 2018-09-18 05:20:08 +02:00
Martin Diehl 82cdc551a5 MPI Communicator only needed for PETSc 3.10.
thx to Jaeyong for figuring this out
2018-09-18 05:17:48 +02:00
Martin Diehl 245676728d not needed 2018-09-17 23:28:00 +02:00
Jaeyong Jung 3beab556a2 runtime polar decompoistion error comes up 2018-09-17 15:41:58 +02:00
Martin Diehl c1a9d3fbf6 names in agreement with the DAMASK paper 2018-09-17 08:23:23 +02:00
Martin Diehl 4a5e55cce9 Merge branch 'development' into 20-NewStyleDislotwin 2018-09-17 07:59:46 +02:00
Martin Diehl e6fa3f3d35 correct stress in postResults 2018-09-16 22:57:50 +02:00
Martin Diehl cea2fba063 don't repeat code that can be handled centrally 2018-09-16 22:38:57 +02:00
Martin Diehl 9570fb894a correct names and no superflous conversions anymore 2018-09-16 22:31:55 +02:00
Martin Diehl 5f06a35900 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-09-16 22:03:05 +02:00
Martin Diehl b54742cfa7 [skip sc] [skip ci] PETSc 3.10 is out 2018-09-15 20:09:27 +02:00
Martin Diehl 075d2e51b2 debugging, still crashing 2018-09-15 16:19:41 +02:00
Martin Diehl 3b1817a954 cleaning, only having mech at the moment 2018-09-15 15:14:48 +02:00
Martin Diehl 934ca56811 clean exit if required files not found 2018-09-15 14:54:56 +02:00
Martin Diehl a92b945e3f does not crash anymore
xx is nc, the number of components
needs to be 3 in the current case
2018-09-15 11:40:07 +02:00
Martin Diehl 45dc59b1d8 kinetics also for trans 2018-09-15 10:43:05 +02:00
Martin Diehl 5e33900664 Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-15 08:38:30 +02:00
Martin Diehl ed570f0fe8 use of kinetics avoids different calculation of shearrates 2018-09-15 08:24:12 +02:00
Martin Diehl 3526c0a757 index missing, test failed 2018-09-15 07:49:14 +02:00
Martin Diehl acc3294909 more verbose initialization 2018-09-15 06:39:02 +02:00
Martin Diehl 25a38ad438 initialization broken
- need to consider case of no twin/slip active
- state0 needs to be initialized
2018-09-15 05:45:10 +02:00
Martin Diehl a3750738c0 type mismatch for MSC.Marc 2018-09-14 12:20:37 +02:00
Martin Diehl 9c5ca0e542 use of kinetics simplifies code 2018-09-14 12:17:35 +02:00
Martin Diehl bd0b561772 better readable 2018-09-14 11:56:36 +02:00
Martin Diehl 9f16cefd9f renaming in accordance with the DAMASK paper 2018-09-14 11:17:14 +02:00
Martin Diehl af32b3d85b reordering for easier overview 2018-09-14 10:51:44 +02:00
Martin Diehl 3dd47eade9 just renaming, better readable... 2018-09-14 10:18:44 +02:00
Martin Diehl 07b0ddf711 polishing 2018-09-14 10:08:36 +02:00
Martin Diehl 80a2062c4b Merge remote-tracking branch 'origin/20-NewStyleDislotwin' into 20-NewStyleDislotwin 2018-09-14 10:00:11 +02:00
Martin Diehl 18858301d5 using consistently i as first running index and j as second 2018-09-14 09:59:04 +02:00
Martin Diehl 55511782e8 incomplete transition/renaming
caused segmentation fault
2018-09-14 08:19:39 +02:00
Martin Diehl f98243e4ac Merge branch 'development' into 43-wrong-stress-in-dotstate-and-deltastate 2018-09-14 05:39:15 +02:00
Martin Diehl 989393e6e8 should not differ from development 2018-09-14 05:37:17 +02:00
Martin Diehl e2a66f6ddb should not differ from development 2018-09-14 05:33:39 +02:00
Martin Diehl b165e48d9f non-Schmid contribution were ignored in test
reverted, just to ensure that the results have not changed: Never
polishing and change physics at the same time
2018-09-14 05:21:05 +02:00
Martin Diehl cc20b044a6 forgot to allocate array now used internally only 2018-09-13 09:27:54 +02:00
Martin Diehl ad3994c484 allocate all dependentStates/microstructures 2018-09-13 06:48:06 +02:00
Martin Diehl e7f7fa74b7 don't do calculation of dependentStates/microstructure manually 2018-09-13 06:20:58 +02:00
Martin Diehl 8baa4f9c81 need to avoid array access out of bounds 2018-09-13 06:12:32 +02:00
Martin Diehl ae8efe2755 Merge branch 'development' into 44-column-major-access-to-interaction-matrices 2018-09-13 05:55:59 +02:00
Martin Diehl 8ecb019566 real must be pReal for MSC.Marc 2018-09-13 05:51:58 +02:00
Martin Diehl 4266872965 array out of bounds was possible for Ntwin =0
in postResults(c+1:c+prm%totalNtwin) c+1 will be out of bounds if
c is already size(postResults)
2018-09-13 05:41:44 +02:00
Martin Diehl 66edad1cf8 avoid code doubling
shear rates needed multiple times. For now, just introduced but not
used. Will become active once the test passes again
2018-09-12 22:07:59 +02:00
Martin Diehl 3068caa9a3 [skip sc] resolved stress not needed
using kinetics_xxx as in disloUCLA
compiles on gfortran but pre-receive hook with intel compiler (MSC.Marc)
fails
2018-09-12 21:05:40 +02:00
Martin Diehl ac3625afba array access out of bounds 2018-09-12 20:42:57 +02:00
Martin Diehl 4e68d049a8 WIP: calculating rotated stiffness matrices for transformation 2018-09-12 20:37:55 +02:00
Martin Diehl b95174a8b7 reducing global variables 2018-09-12 16:16:31 +02:00
Martin Diehl 192bb6453d cleaning 2018-09-12 15:57:54 +02:00
Martin Diehl b753a86d13 cleaning 2018-09-12 15:27:47 +02:00
Martin Diehl 0a621ece8b WIP: polishing and implementing remaining functions 2018-09-12 14:29:22 +02:00
Martin Diehl f1f8922ab8 more meaningful error messages 2018-09-12 14:03:45 +02:00
Martin Diehl d7023096ad introduced kinetics, not in use yet 2018-09-12 13:25:18 +02:00
Martin Diehl edebe4d1ed vectorization error 2018-09-12 12:26:33 +02:00
Martin Diehl c9b5b3fb7b should be always set, even if no twinning is enabled
fixes NaN in dotState
2018-09-12 12:08:03 +02:00
Martin Diehl 253f318e55 preventing NaN in dotState 2018-09-12 11:47:35 +02:00
Martin Diehl 2337dde525 cleaning 2018-09-12 11:26:59 +02:00
Martin Diehl 8a406150f8 polishing 2018-09-12 10:06:04 +02:00
Martin Diehl 3352611267 cleaning 2018-09-12 09:59:09 +02:00
Martin Diehl 01196ca36b Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-09-12 09:50:24 +02:00
Martin Diehl c9208315f5 avoid repeated calculations
does not save so much here, but avoids having inconsistent calculation
(e.g. nonSchmid effects) and serves as a template for more complex
models
2018-09-12 09:23:11 +02:00
Martin Diehl ad7c099fe3 Merge branch 'development' into 20-NewStyleDislotwin 2018-09-11 17:03:05 +02:00
Martin Diehl ce6e6679d5 causes array access out of bounds, needs further checks 2018-09-11 12:20:05 +02:00
Martin Diehl 51a6f4b990 Merge branch 'development' into 20-NewStyleDislotwin 2018-09-11 02:39:53 +02:00
Martin Diehl 3d49c70dbc commenting 2018-09-08 20:15:17 +02:00
Philip Eisenlohr 9be2c084e4 Merge branch '39-simplify-obscure-numerics-integration-mode' into 'development'
Resolve "simplify obscure numerics integration mode"

Closes #39

See merge request damask/DAMASK!36
2018-09-07 19:34:35 +02:00
Philip Eisenlohr 7e330f1249 Merge branch '37-include-hdf5-routines' into 'development'
Resolve "Include HDF5 routines"

Closes #37

See merge request damask/DAMASK!37
2018-09-07 19:18:07 +02:00
Satyapriya Gupta a16454f1f9 fixed missing propagation of dependent state variables 2018-09-06 16:48:28 -04:00
Martin Diehl e70efd2608 inform about debug versions indenpendently of the solver 2018-09-06 16:49:39 +02:00
Martin Diehl 8324962123 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-09-06 16:26:46 +02:00
Martin Diehl 8b3d30fdd4 don't know what happend to the copyright note 2018-09-05 23:47:01 +02:00
Martin Diehl 0f084a9844 cleaning output 2018-09-05 23:39:54 +02:00
Martin Diehl 918de24f83 using microstructure instead of 'dependent state' 2018-09-05 23:00:46 +02:00
Martin Diehl 1f9d268e29 renaming 2018-09-05 16:15:57 +02:00
Martin Diehl 97977f4940 all parameters should be stored in the constitutive laws
no need to know the 'phase number' anymore
2018-09-05 15:54:19 +02:00
Martin Diehl 038508aa11 'dependent states' do not need to be accessible globally 2018-09-05 11:07:00 +02:00
Martin Diehl 4fbe5811a3 too much whitespace 2018-09-01 11:08:38 +02:00
Martin Diehl e9f738fade cleaning + renaming 2018-09-01 10:58:50 +02:00
Martin Diehl cf65aae92a correct names 2018-09-01 06:49:03 +02:00
Martin Diehl 0b94b8085d still just polishing 2018-08-31 18:17:35 +02:00
Philip Eisenlohr 6a64637ac3 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-31 11:23:25 -04:00
Philip Eisenlohr 3e81110830 tell user whether DEBUG version or not 2018-08-31 11:22:59 -04:00
Martin Diehl 34d1c011c7 long name does not help here 2018-08-31 16:38:17 +02:00
Martin Diehl ea1fd621aa more cleaning 2018-08-31 16:36:19 +02:00
Martin Diehl 7a67922c5f general polishing 2018-08-31 16:08:01 +02:00
Martin Diehl 912926e604 more improvements 2018-08-31 15:07:22 +02:00
Martin Diehl c0e7050867 more loops simplified 2018-08-31 14:54:33 +02:00
Martin Diehl 60e60e211c also simplifying twin loops 2018-08-31 14:33:42 +02:00
Martin Diehl dc91016729 simpler loop structures for better readability 2018-08-31 13:38:07 +02:00
Martin Diehl 42745c66f0 nested loops do not improve readability 2018-08-31 13:32:24 +02:00
Martin Diehl ba65044ff5 looping over systems simplifies loop structure 2018-08-31 13:19:28 +02:00
Martin Diehl 3431086fdb storing data per slip system simplifies calculation 2018-08-31 13:14:16 +02:00
Martin Diehl c9bb051261 fill local Schmid Matrices 2018-08-31 11:52:43 +02:00
Martin Diehl 54fe0afb16 indentation wrong 2018-08-31 11:42:54 +02:00
Martin Diehl fc4253ed57 conversion from 3x3 to 6 of stress in constitutive will be remove later 2018-08-31 11:37:14 +02:00
Martin Diehl 3b88096cd7 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-31 11:09:52 +02:00
Martin Diehl 5330fb31ad more verbose error message 2018-08-31 10:19:37 +02:00
Martin Diehl f028e05298 guessing was not correctly set 2018-08-31 10:14:33 +02:00
Martin Diehl 3cb279b083 one more loop not needed 2018-08-31 10:03:15 +02:00
Martin Diehl 017563e061 one more loop not needed 2018-08-31 09:14:16 +02:00
Martin Diehl c0ac05aa88 no need to use two loops 2018-08-31 09:12:50 +02:00
Martin Diehl 732022d4f0 functions from IO does not add any value here
only prevents the automated selection of a new unit
2018-08-31 08:58:13 +02:00
Martin Diehl d18d74ae31 mechanics solver type is set only once
as all mech routines have the same interface, this leaner syntax can be
used
2018-08-31 08:20:23 +02:00
Martin Diehl 0b049fc843 Merge branch 'development' into 42-new-coding-style-for-homogenization 2018-08-31 06:36:12 +02:00
Martin Diehl 26d18257d2 requested output is stored in prm%outputID 2018-08-31 06:35:30 +02:00
Martin Diehl 91a3b4ed69 almost done 2018-08-31 01:24:28 +02:00
Martin Diehl 6b45afa72f using parameters from config.f90 2018-08-30 17:51:31 +02:00
Martin Diehl 555ca8e5f1 debug statements not needed anymore 2018-08-30 17:21:22 +02:00
Martin Diehl 62413e8187 now compiles again 2018-08-30 17:18:56 +02:00
Martin Diehl 5f97ae9080 not used at the moment 2018-08-30 16:39:18 +02:00
Martin Diehl cbecb71000 [skip sc] using explicit interface helps to get correct type
still some issues with different ranks and datatypes
2018-08-30 13:10:18 +02:00
Martin Diehl b930c68887 PETSc 3.9 style (no SIGSEGVs anymore) 2018-08-30 12:38:44 +02:00
Martin Diehl 8b6bef159e a little bit more verbose 2018-08-30 12:38:29 +02:00
Martin Diehl 3254ae79a5 collecting questions to Pratheek 2018-08-30 12:37:47 +02:00
Martin Diehl d180af494e adopted to new PETSc fortran interface 2018-08-30 11:55:13 +02:00
Martin Diehl 1f9a614388 no need to have long prefixes for local variables and functions 2018-08-30 10:50:52 +02:00
Martin Diehl 88d776cad6 consistent renames 2018-08-30 10:46:30 +02:00
Martin Diehl 29e55d20fb message better to understand and giving error instead of SIGSEGV 2018-08-30 09:42:45 +02:00
Martin Diehl b96e01c128 Merge branch 'development' into lattice-builds-interaction 2018-08-30 05:41:40 +02:00
Martin Diehl 105c4077ad Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-08-30 00:58:54 +02:00
Martin Diehl b163a8aaa0 Non-schmid activated again
internally, no need for long name plastic_phenopowerlaw_postResults
2018-08-30 00:57:15 +02:00
Martin Diehl bcff95ddf8 using new values for initialization 2018-08-29 13:52:26 +02:00
Martin Diehl 0b2dd86bbf handling cluster orientation 2018-08-29 13:36:46 +02:00
Martin Diehl b884349e7b only renaming
3333 not needed for dX_dY if X and Y are 3x3 tensors
PK2 stress is S not T according to the DAMASK paper
2018-08-29 13:16:37 +02:00
Martin Diehl 6d28883db5 starting to include non-Schmid terms (again) 2018-08-29 12:07:51 +02:00
Martin Diehl 922273f230 does not make sense to store and use the 6-vector version of the Schmid
matrix
2018-08-29 12:03:31 +02:00
Martin Diehl baeb449e07 WIP: debugging 2018-08-29 11:44:39 +02:00
Martin Diehl ef506b801e fixed two memory faults (unallocated and wrong index) 2018-08-29 09:52:22 +02:00
Martin Diehl f2acc14882 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-29 08:27:15 +02:00
Martin Diehl 680c9e11d4 segmentation fault in cause of empty list 2018-08-29 08:26:28 +02:00
Martin Diehl b5e4ad247d LpAndItsTangent naming convention following DAMASK paper 2018-08-28 15:40:24 +02:00
Martin Diehl fc3ce54667 return more than one tangent 2018-08-28 15:07:39 +02:00
Martin Diehl 15e2d4a7cd Tstar is S
according to the DAMASK paper
2018-08-28 15:02:58 +02:00
Martin Diehl 4c14f988a3 rename according to paper 2018-08-28 14:58:17 +02:00
Martin Diehl 63b939489b reading in parameters using new style in parallel 2018-08-28 13:15:38 +02:00
Martin Diehl f9214c8e1b should not be handled by the individual model
avg(P) and avg(F) exist independently of RGC
2018-08-28 13:02:44 +02:00
Martin Diehl 7f00082d60 parameters easier to identify 2018-08-28 12:57:22 +02:00
Martin Diehl 06e7156351 did not work for values <0 2018-08-28 12:41:21 +02:00
Martin Diehl 42f8b0a063 labels of slip and twin systems for more self-explanatory output 2018-08-28 12:27:56 +02:00
Martin Diehl 94695f773e more verbose and works for arbitrary precision 2018-08-28 07:47:05 +02:00
Martin Diehl 4112da183e Merge branch 'development' into 42-new-coding-style-for-homogenization 2018-08-28 06:28:13 +02:00
Martin Diehl 9b3ddcd2c2 more explicit 2018-08-28 06:27:38 +02:00
Martin Diehl 331eaabaa4 standard style from plasticity
using derived type for parameters
explicit "use" to see dependencies
2018-08-28 06:24:26 +02:00
Franz Roters 38fd517c44 Merge remote-tracking branch 'remotes/origin/36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading' into development 2018-08-27 15:13:16 +02:00
Martin Diehl 38a855243d Merge branch 'development' into 43-wrong-stress-in-dotstate-and-deltastate 2018-08-27 06:31:45 +02:00
Martin Diehl dd81fe806d naming was not completely corrected 2018-08-27 06:30:55 +02:00
Martin Diehl 11a7103675 more explicit 2018-08-27 00:00:21 +02:00
Martin Diehl e6408e0ce3 corrected careless changes
using unallocated pointer and asigning wrong label
2018-08-26 21:05:59 +02:00
Martin Diehl b11666effa Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-08-26 13:59:50 +02:00
Martin Diehl a5f139b786 unused variables 2018-08-26 11:53:18 +02:00
Martin Diehl 241b2ade8b more portable way to define PI
https://software.intel.com/en-us/forums/intel-visual-fortran-compiler-for-windows/topic/490432
and compiler will not complain about truncation
2018-08-26 11:40:38 +02:00
Martin Diehl 0041d21777 output was screwed up 2018-08-26 06:20:48 +02:00
Martin Diehl 4f1becb503 cleaning and fixing bugs (wrong indices) 2018-08-25 21:27:14 +02:00
Martin Diehl f458de82fa simplified 2018-08-25 21:13:32 +02:00
Martin Diehl 3ff7c9c0eb extendend to Schmid_twin 2018-08-25 20:55:15 +02:00
Martin Diehl fbaac484ea extended to postResults 2018-08-25 20:32:01 +02:00
Martin Diehl 780699740d internal (non)-Schmid definitions also in dotState 2018-08-25 20:19:02 +02:00
Martin Diehl ba9330c8dd early rename 2018-08-25 20:08:46 +02:00
Martin Diehl d51b00c2d3 no need to loop over families and systems independently. no need for 3333 2018-08-25 20:06:19 +02:00
Martin Diehl d055ef665a using only internal schmid and non schmid matrices 2018-08-25 20:01:39 +02:00
Martin Diehl cc5d04ff2a newly introduced parameters for non-schmid were confusing 2018-08-25 19:28:09 +02:00
Martin Diehl 5b3bed3e48 functionality to calculate SchmidMatrices 2018-08-25 18:32:55 +02:00
Martin Diehl d3db0d816c ordered by dimension and set private where possible 2018-08-25 17:29:20 +02:00
Martin Diehl 1c76e156d9 new symmetry handling will be handled in a different branch 2018-08-25 17:19:48 +02:00
Martin Diehl bde242902b Merge branch 'development' into 43-wrong-stress-in-dotstate-and-deltastate 2018-08-25 16:02:12 +02:00
Martin Diehl b8b5bac684 dotState and deltaState parse Mstar instead of Tstar
requires to parse in Fi
2018-08-25 15:59:34 +02:00
Martin Diehl 22a232ad08 bug: memory access out of bounds
introduced when moderninzing reading in of parameters
2018-08-25 15:50:43 +02:00
Martin Diehl 7e002d1bfb missing rename 2018-08-25 14:42:44 +02:00
Martin Diehl e46605f0ef forall is deprecated 2018-08-25 14:36:21 +02:00
Martin Diehl 17d88184a7 typos fixed 2018-08-25 14:35:49 +02:00
Martin Diehl 35688a6acf temp33 not needed (compiler should be smart enough) 2018-08-25 14:29:03 +02:00
Martin Diehl 953fff79ac prepared LpAndItsTangent to remove superflous forward-backward
conversion

updating the individual plastic laws will be done in the respective
branches
2018-08-25 14:21:06 +02:00
Martin Diehl d585deee7e unified syntax
_v for vector representation of tensor conflicts with 3333 suffix for
4-th order tensors.
General idea: Mark symmetric second order tensors in vector notation with
'6' and fourth order tensors in second order matrix notation with '99'.

Append nothing for 'natural' representation, i.e. F and NOT F33, Lp_dTstar and NOT
Lp_dTstar3333
2018-08-25 14:07:23 +02:00
Martin Diehl 025cbddd00 generic function and interfaces for slipSlip, twinTwin, transTrans 2018-08-25 13:08:32 +02:00
Martin Diehl 6800a5a6f6 just adopting naming convention 2018-08-25 11:07:56 +02:00
Martin Diehl 49ae38d0f9 using parameters from linked list and removed output
homogenization models should only provide model specific output in
accordance with http://dx.doi.org/10.1007/s40192-017-0084-5
2018-08-25 11:03:43 +02:00
Martin Diehl 7ecb7689f1 Intel compiler failed with SIGSEV
derived types, pointers, finalize .... altogether seems to bring both Compilers to their limits.
I cannot see what was wrong before, but now it works and might be a little faster
2018-08-23 00:13:57 +02:00
Martin Diehl 271b9ba76b intersting note ... 2018-08-22 23:28:47 +02:00
Martin Diehl 8c5f3d4e07 only needed once 2018-08-22 22:52:12 +02:00
Martin Diehl 51b4ef319a HDF5 was not compiled due to missing dependency 2018-08-22 20:12:16 +02:00
Martin Diehl dc596e6789 zero termination does not work 2018-08-22 18:09:17 +02:00
Martin Diehl 1a943df97e small flaws 2018-08-22 17:52:00 +02:00
Martin Diehl ab45818d51 seems to work now
anyway, nicer code
2018-08-22 14:30:51 +02:00
Martin Diehl 1b5623ad6c avoid out of bound access, removed unneeded stuff 2018-08-22 14:22:37 +02:00
Martin Diehl 037ab3d081 getTag works now for tags with the same start and close tag
needed for '/echo/'. Still suggest to rather use /echo\
2018-08-22 13:10:59 +02:00
Martin Diehl 52088691d1 improved linked list and fixed solution for strange bug
Bug: Using automated LHS re-allocation for a string array that with global scope seems to cause trouble
     Hence, "parse_file" works with a local string and assings only once to it

Linked_List: Now storing data in the list head also and last element is always empty.
             Finalize allows simple handling of deallocation
2018-08-22 11:51:23 +02:00
Martin Diehl 52002f654e to converge at one point to one (or two) string lenth values 2018-08-22 09:14:16 +02:00
Martin Diehl 0068dba40f Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading 2018-08-22 09:11:33 +02:00
Martin Diehl 4d432e5462 Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-08-21 23:03:56 +02:00
Martin Diehl 0fa902100c Merge branch 'development' into 39-simplify-obscure-numerics-integration-mode 2018-08-21 22:59:57 +02:00
Martin Diehl 61070fd908 Merge branch 'development' into 37-include-hdf5-routines 2018-08-21 22:46:30 +02:00
Martin Diehl 8de321382f using final seems to be the better approach
http://www.training.prace-ri.eu/uploads/tx_pracetmo/AdvFTN_handout.pdf
still needs in-depth analysis, even though I cannot reproduce 'terminally ill'
2018-08-21 08:14:59 +02:00
Martin Diehl d146417abe hot fix for terminally ill with gfortran 7.3
might be a bug in the compiler or in the linked list.
waste some memory at the moment...
check linked list carefully before enabling again and blaming gfortran
2018-08-21 07:41:10 +02:00
Martin Diehl 465d950ab1 gfortran 7.3 and optimized code still gives 'terminally ill' 2018-08-21 07:09:50 +02:00
Martin Diehl 60f56255e4 [skip sc] [skip ci] simplified interfacing 2018-08-20 23:14:49 +02:00
Martin Diehl 69ad600916 more explicit file opening
still having trouble with Gfortran 7.3 and no numerics.config
2018-08-20 22:36:55 +02:00
Philip Eisenlohr 87a8a9536b absTol for divergence was way too tight 2018-08-20 16:34:43 -04:00
Martin Diehl c78396dd78 randomized FILEUNIT
matrix inversion error when numerics.config is not there or not present
very strange
2018-08-20 22:11:53 +02:00
Martin Diehl e47677738a more verbose error 2018-08-20 17:57:15 +02:00
Martin Diehl 031c59954f working directory is changed automatically 2018-08-20 17:45:34 +02:00
Martin Diehl 29cd8fa5e2 Merge branch 'development' into 36-include-hdf5-routines 2018-08-20 17:35:32 +02:00
Martin Diehl dbed7056e5 [skip sc] cleaning 2018-08-20 17:08:33 +02:00
Martin Diehl 93562d5142 mapping of elements etc not needed for PETSc-based FEM and spectral
solvers
2018-08-20 16:42:47 +02:00
Martin Diehl e3e905938e all elements are CP elements 2018-08-20 16:23:05 +02:00
Martin Diehl 3e4c878304 using shared interface for spectral and FEM solver
group_scalar seems inappropriate as integers are also scalars. renamed
to group_float (is actually usually of double precision).

think about better name, types should have a t prefix. tgroupFloat?
2018-08-20 16:09:40 +02:00
Martin Diehl b8d56ae320 unfified interface for spectral and FEM solver
Note: extension to load case and geometry is not added automatically
anymore!
2018-08-20 15:59:13 +02:00
Martin Diehl f29a5b3df3 not used at all 2018-08-20 13:15:44 +02:00
Martin Diehl 543c49426f Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-08-20 09:09:15 +02:00
Martin Diehl 3a097d1099 Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading 2018-08-20 09:04:28 +02:00
Martin Diehl 8fb780ab42 now compiles with gfortran 2018-08-20 09:01:13 +02:00
Martin Diehl d6c69e3a18 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-18 23:17:07 +02:00
Martin Diehl 85358bae1b copy and paste error 2018-08-18 21:30:57 +02:00
Martin Diehl 97659c359a MPI write only in case that PETSc is used 2018-08-18 21:01:25 +02:00
Martin Diehl 3b3e0bc068 forgotten use 2018-08-18 17:11:50 +02:00
Martin Diehl 67314fc204 leftover from reducing numerics_integrator to scalar
postponed simplification to scalar because of heavy modification in plastic
constitutive laws
2018-08-18 16:42:32 +02:00
Martin Diehl 2618593568 :Merge branch 'development' into Integration-Mode-Confusion 2018-08-18 16:37:25 +02:00
Martin Diehl f7c20d74af compiles now, but most likely does not work 2018-08-18 15:58:42 +02:00
Martin Diehl 0d8f17cbe6 adjusting to PETSc 3.9.x 2018-08-18 14:05:57 +02:00
Philip Eisenlohr c03ea8f5c7 added forgotten C66(2,2) read-in from parameter database 2018-08-17 15:43:09 -04:00
Philip Eisenlohr 62d2806fe1 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-17 14:59:00 -04:00
Martin Diehl d4bcfae82b WIP: adopting to PETSc 3.9.x and modifications in development branch 2018-08-17 12:00:44 +02:00
Martin Diehl 821860987c copied existing files 2018-08-17 00:14:25 +02:00
Martin Diehl 26b08bc21b Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading 2018-08-16 23:39:14 +02:00
Martin Diehl b64b5b82de integrationMode was always 1, very obscure code
was most likely the leftover of old functionality
2018-08-16 23:33:39 +02:00
Philip Eisenlohr 1493b33a03 fixed buggy state width assignment (endindex += %nSlip corrected to %totalNslip) 2018-08-14 01:07:06 +02:00
Philip Eisenlohr 66e68151ea Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-13 18:28:59 -04:00
Philip Eisenlohr ba215ed9ea small polish 2018-08-13 18:27:51 -04:00
Martin Diehl 5337fb1229 old runtime debugging leftovers 2018-08-05 11:08:17 +02:00
Martin Diehl c0adb61350 outdated description 2018-08-05 10:41:01 +02:00
Martin Diehl 60fc47ca2a unused import 2018-08-05 09:41:27 +02:00
Martin Diehl fd578ab8eb Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-08-05 07:38:09 +02:00
Martin Diehl 386c3e7797 Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading 2018-08-05 06:04:33 +02:00
Martin Diehl 661636d83e default values needed to suppress error in case of missing key 2018-08-04 22:53:56 +02:00
Martin Diehl f522f79703 Merge branch 'development' into 35-new-style-of-reading-in-parameters-in-lattice 2018-08-04 22:42:14 +02:00
Martin Diehl 6a4260ac07 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-04 22:29:52 +02:00
Martin Diehl 9360c171a1 polished for merge
access to array(n+m:) is safe for array of size n with m>1
2018-08-04 19:39:50 +02:00
Martin Diehl 20d1264d07 small improvements
default case of error handling, checking for recursion limit, some
comments to also understand it later
2018-08-04 13:58:01 +02:00
Philip Eisenlohr 8edeeaf213 renaming of p_vec and friends to names based on "group" 2018-08-03 19:39:14 -04:00
Martin Diehl 8a32ed8747 calculating non-schmid related data only once 2018-08-03 23:03:51 +02:00
Martin Diehl 8c07825d7e Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading 2018-08-03 22:21:37 +02:00
Martin Diehl 5b409fd6f7 type mismatch 2018-08-03 16:16:50 +02:00
Martin Diehl f0645d84f5 not a target anymore 2018-08-03 15:10:38 +02:00
Martin Diehl 5cf2973715 naming reflect change from Piola-Kirchhoff to Mandel stress
not using the symmetrized stress anymore to avoid handling of
symmetrized Schmid matrizes. The time saved when calculating the double
contraction is probably anyway lost during the conversion from (3,3) to
(6) of Mstar
2018-08-03 14:53:40 +02:00
Martin Diehl b8e8193001 many imported functions not used anymore, moving parameters to structure 2018-08-03 11:10:22 +02:00
Martin Diehl 38183fdbf6 Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading 2018-08-03 08:57:44 +02:00
Martin Diehl dc6855261a number of helper functions for HDF5 2018-08-03 08:53:37 +02:00
Martin Diehl c2f9709567 leaner, most of it also supported by older gcc 2018-08-03 08:42:26 +02:00
Martin Diehl af931a78c7 finalizing reading in 2018-08-03 08:09:28 +02:00
Martin Diehl 68c476f690 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-03 07:56:02 +02:00
Martin Diehl 0a6bde70c5 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-08-03 06:56:43 +02:00
Martin Diehl 5d09e98e02 checking with Philip 2018-08-03 01:14:18 +02:00
Martin Diehl 3cceda5fe3 Merge branch 'development' into 31_consistent_wd 2018-08-03 00:08:16 +02:00
Pratheek Shanthraj bc3f6ae97c missing bits in getStrings function 2018-07-31 23:15:44 +02:00
Martin Diehl a908e66306 WIP: reading in new style 2018-07-30 11:58:59 +02:00
Martin Diehl ed97afb51c WIP: inherent definition instead of check, using new reading in functionality 2018-07-29 21:18:04 +02:00
Martin Diehl 5eed7d06e9 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-07-29 20:29:55 +02:00
Martin Diehl 449449b500 does the same as numpy.clip 2018-07-28 01:31:02 +02:00
Martin Diehl 1c83f841aa don't depend on any shear band parameters if sbVelocity is switched of 2018-07-20 17:52:15 +02:00
Martin Diehl e7fd445816 WIP: Simplifying
using maxval gives inherently correct values and a consistency check is not needed any more
using config_phase capabilities to read in lattice related data
2018-07-20 14:13:13 +02:00
Martin Diehl 8554279351 outputID is not of default integer type (causes trouble with MSC.Marc) 2018-07-20 04:02:49 +02:00
Sharan Roongta 3f285d3a3f polishing: prm replaces param(instance) 2018-07-17 19:29:39 +02:00
Martin Diehl a3037a6064 cmpftwin was not read in 2018-07-17 18:02:55 +02:00
Martin Diehl b3a6aabdc5 cthresholdtwin was not read in!
polished and commented
2018-07-17 12:32:57 +02:00
Martin Diehl edcf97ea59 associate: clearer code and no performance drawbacks 2018-07-16 22:02:31 +02:00
Martin Diehl df42e9ed88 using associate avoids performance issues related to pointers 2018-07-16 21:37:26 +02:00
Martin Diehl e0e03827c5 simplified 2018-07-16 21:14:33 +02:00
Martin Diehl fb1265db3d checking for existing file 2018-07-16 20:08:31 +02:00
Martin Diehl fc0499a9bb bug fixes and polishing
bugs: wrong bracket in calculation of threshold_stress_twin
      3**b_twin instead of 3*b_twin in calculation of threshold_stress_twin
      ph instead of instance in calculation of mfp_twin
2018-07-16 19:53:26 +02:00
Martin Diehl a1ad18c88a 256 characters is enough for material.config
larger values waste memory and decrease readability.
Still need to discuss how geom files are handled, for them longer limits make sense
2018-07-16 12:08:22 +02:00
Martin Diehl 7f05bf9c0a leftover variables not needed anymore 2018-07-16 11:54:46 +02:00
Martin Diehl b26c4a39ef store raw material.config 2018-07-16 11:42:58 +02:00
Martin Diehl 3f7a1d1c07 function to read and store complete text file
reading as stream avoids costly repeated call to 'read'. Requires of course more memory, but that should be fine
also, recursion case ('{}') is internally handled. Old recursive was error prone and buggy when rewining (see 'reset' option)
2018-07-16 11:40:42 +02:00
Martin Diehl bc5fcf2c14 leftover variable from cleaning 2018-07-16 10:51:42 +02:00
Martin Diehl 84c29bb255 Merge branch 'development' into 19-NewStyleDislotwin 2018-07-13 11:54:42 +02:00
Sharan Roongta 0c7c77987b typo in plastic dislotwin 2018-07-12 23:22:55 +02:00
Sharan Roongta eb7860ba22 Tolerances were different from original 2018-07-12 18:30:30 +02:00
Martin Diehl a4e4a9c4ab merge does not work for strings of different length
fixed possible out of bounds access
2018-07-10 21:40:01 +02:00
Martin Diehl a1b1a4c476 include files are not libraries 2018-07-10 18:26:45 +02:00
Martin Diehl f493a5419b forgot line continuation 2018-07-10 10:39:24 +02:00
Martin Diehl 1336f8f129 cleanding and simplifying
1) arguments are case sensitive, i.e. -H is NOT -h
2) don't rely on trailing '/' for working dir
3) when adding '/' to working dir, rectify path should take care of '//'
2018-07-10 10:23:21 +02:00
Martin Diehl 70a3db275a verbose error message 2018-07-10 09:53:20 +02:00
Martin Diehl ac7bc4b9ed dont' store the working directory but set it centrally
makes life easier, writing and reading always to CWD unless absolute path is given
Spectral: using --wd argrument and C code
MSC.Marc: using directory of input deck and Intel extension
Abaqus: using function and Intel extension
2018-07-10 08:24:45 +02:00
Martin Diehl cd4dc25513 Merge branch 'development' into 31_consistent_wd 2018-07-08 15:14:19 +02:00
Martin Diehl 771b8f00ec leftover from performance reporting/debugging 2018-07-07 13:50:39 +02:00
Martin Diehl a78d1d7556 Merge branch 'development' into 20-NewStyleDislotwin 2018-07-07 13:26:45 +02:00
Martin Diehl c2b332616a Merge branch 'development' into 31_consistent_wd 2018-07-07 12:37:51 +02:00
Martin Diehl 5295b49ab3 deallocate statements not needed
not clear why global variables need check (should be allocated only once)
local variables are deallocated when they go out of scope
2018-07-07 12:32:57 +02:00
Martin Diehl 4e3cc75c1a forgot rename 2018-07-07 12:32:47 +02:00
Martin Diehl 88b9da1973 using up-to-date development since Abaqus exp has been removed 2018-07-06 19:00:58 +02:00
Martin Diehl a9845c4bf8 using wrong default for dipole formation 2018-07-06 18:57:37 +02:00
Martin Diehl 0065f0472c Merge branch 'development' into 31_consistent_wd 2018-07-06 13:26:29 +02:00
Martin Diehl ce32372f1c more cleaning of old commercial FEM solver files 2018-07-06 13:18:55 +02:00
Sharan Roongta 7ca005d237 avoiding division by zero 2018-07-05 15:44:25 +02:00
Martin Diehl 580a0bbedd reading in interaction parameters, looping only over existing families 2018-07-05 13:09:11 +02:00
Martin Diehl cb71e9401b Merge branch '21_removeperformanceprofiling' into 'development'
21 removeperformanceprofiling

See merge request damask/DAMASK!29
2018-07-04 19:02:02 +02:00
Martin Diehl 346a0b722b Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-07-03 22:59:49 +02:00
Martin Diehl 63057998fe array of size 0 seems to be a common source for segmentation fault 2018-07-03 22:58:49 +02:00
Philip Eisenlohr 3c1012ef38 cut out more now useless pieces 2018-07-03 22:12:25 +02:00
Test User efee9d98e7 elseif contained only debug statements, not needed 2018-07-03 21:58:28 +02:00
Philip Eisenlohr bebcd53445 more commenting, clearer variable naming, stress_mask as param 2018-07-03 15:51:46 -04:00
Martin Diehl 9d993de256 should not be executable 2018-07-03 19:34:26 +02:00
Martin Diehl b1a7eca528 array access out of bounds 2018-07-03 19:32:31 +02:00
Martin Diehl 8eeec5c0f1 also Abaqus works with openMP now/again? 2018-07-03 12:05:14 +02:00
Martin Diehl b1c37996d3 also using short names for state and dotstate in postResults 2018-06-30 14:35:58 +02:00
Martin Diehl c50f32b0d8 shorthand names improve readability for dotstate and LpAnd... 2018-06-30 14:11:05 +02:00
Martin Diehl 980e34f728 state pointer as shortcut, variables not used 2018-06-30 13:37:13 +02:00
Martin Diehl fb80c41215 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-06-30 13:16:04 +02:00
Yang Su a38a3ef83e changed state assignment to b=a;c=b from b=a;c=a --- caused memory fault in ifort15 2018-06-29 18:47:27 -04:00
Yang Su 8c727eb4ff removed obsolete second assignment of slipRate and accSlip pointers 2018-06-29 18:07:32 -04:00
Jaeyong Jung e166f118f4 Merge branch 'development' into 31_consistent_wd 2018-06-29 15:46:55 +02:00
Jaeyong Jung 613e976a86 the working directory and pathes of load and geometry files are now consistent. 2018-06-29 15:36:12 +02:00
Martin Diehl a308b2130a Merge branch 'development' into 21_removeperformanceprofiling 2018-06-28 13:09:11 +02:00
Martin Diehl e8a4f588f4 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-28 07:24:04 +02:00
Martin Diehl b3862ef800 enough to support 3 versions (2018 should be out already/soon) 2018-06-28 07:22:32 +02:00
Martin Diehl 716065c0cd Merge branch 'development' into 30_parsePhasePartOnce 2018-06-27 21:43:09 +02:00
Martin Diehl 2bee95bfee argument for checking expected shape in the future 2018-06-27 18:04:06 +02:00
Martin Diehl cc0db1a577 WIP: compiles 2018-06-27 17:38:52 +02:00
Martin Diehl 158e6fd601 Merge branch '30_parsePhasePartOnce' into 20-NewStyleDislotwin 2018-06-27 11:24:42 +02:00
Sharan Roongta 90d9724b9f Reading in of parameters using list 2018-06-27 11:22:16 +02:00
Martin Diehl 49126d2f6f further simplified 2018-06-27 10:19:50 +02:00
Martin Diehl 0f05565fd5 don't complicate code with potential enhancements 2018-06-27 10:09:19 +02:00
Martin Diehl ddf7584f4d following ideas implemented by Philip in disloUCLA
prm and stt are pointers to instance of parameter and state
interaction_xxYY is a matrix, gets shape assigned during calculation
totalNslip and totalNslip are defined as derived parameter
2018-06-27 10:01:36 +02:00
Martin Diehl 00f34363dc adjusted naming convention 2018-06-27 09:12:33 +02:00
Martin Diehl fb528dad52 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-27 09:05:37 +02:00
Martin Diehl 78f9a107fe exception for empty list 2018-06-27 09:04:14 +02:00
Martin Diehl 96e5175f41 updated rename 2018-06-26 21:08:13 +02:00
Martin Diehl 2bc919e4e3 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-26 21:04:10 +02:00
Martin Diehl fc83a76318 consistent naming 2018-06-26 20:54:54 +02:00
Martin Diehl ea80e04ea8 deallocating config, simplifying 2018-06-26 20:50:06 +02:00
Martin Diehl bb415e8a02 using array size not to rely on correctly set variable, cleaning crystallite data after use 2018-06-26 20:33:41 +02:00
Martin Diehl 98cc56968e don't rely on a variable, use the array size directly 2018-06-26 20:33:02 +02:00
Martin Diehl d786ead381 freeing space
debug statements have been inactive for a while ...
2018-06-26 20:31:52 +02:00
Martin Diehl 1abe747204 possibility to deallocate material.config parts 2018-06-26 20:30:41 +02:00
Martin Diehl a68c466fc6 simplified 2018-06-26 19:18:23 +02:00
Martin Diehl 66a254f8fb polishing 2018-06-26 19:09:46 +02:00
Martin Diehl 6a75021bca need to check at the beginning
wrong logic in case default was overwritten
2018-06-26 19:09:08 +02:00
Martin Diehl 92bcf3a7aa function to free elements of the string list.
Note: Pointers that are allocated will never go out of scope. Pointers
that are assigned (=>) will be deallocated/disaccociated like allocatables
that go out of scope
2018-06-26 18:48:29 +02:00
Philip Eisenlohr b907acfbfa improved if then else logic here and there 2018-06-26 11:36:45 -04:00
Jaeyong Jung a8c69dfcad commit spectral_interface 2018-06-26 16:09:37 +02:00
Philip Eisenlohr 1b920705d7 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-06-26 10:03:02 -04:00
Martin Diehl 5c9f6c61b1 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-26 08:22:44 +02:00
Martin Diehl a5ca26ab10 bug (copy and paste): fiber should be counted, not gauss 2018-06-26 08:20:40 +02:00
Martin Diehl 860899b769 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-26 08:03:49 +02:00
Martin Diehl 0680b1706f improved error handling 2018-06-26 07:56:20 +02:00
Martin Diehl 6ffac60961 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-26 07:38:53 +02:00
Martin Diehl a91fa75a28 sanity check, something is going wrong with intel 16.0 2018-06-26 07:38:41 +02:00
Sharan Roongta 2480d2f1ba Reading in of parameters made consistent 2018-06-25 20:07:35 +02:00
Sharan Roongta 57c6f44dfc Merge branch '30_parsePhasePartOnce' into 20-NewStyleDislotwin 2018-06-25 15:36:23 +02:00
Sharan Roongta 300b2827b2 Using new functions for parsing material config 2018-06-25 15:28:15 +02:00
Martin Diehl 6cd08a38b1 pre-defined variables seem to work for gfortran 2018-06-25 14:06:13 +02:00
Martin Diehl d484d1b5bb fixed typo and removed alias 2018-06-25 10:33:22 +02:00
Martin Diehl bd09bd91f9 exit immediately if array size does not match Nslip/Ntwin
otherwise, array acces out of bounds might happen for subsequent sanity
checks
2018-06-23 14:48:32 +02:00
Martin Diehl 74aec7bb71 circumventing bug in Gfortran, tests use correct label (a_slip) 2018-06-22 18:14:14 +02:00
Martin Diehl 363c083886 Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-22 17:57:33 +02:00
Martin Diehl 1add0f3d84 gfortran does not recognice an empty array as 'present' 2018-06-22 08:03:22 +02:00
Martin Diehl c5ebe3510f simplified by using empty string list as default 2018-06-21 23:49:07 +02:00
Martin Diehl c5b00e7a6c consistent description 2018-06-21 23:48:34 +02:00
Martin Diehl 0f3485c4a1 using default value for when getting strings, setting correct size for post results 2018-06-21 23:14:30 +02:00
Martin Diehl fd097846ae Merge branch '30_parsePhasePartOnce' into 19-NewStylePhenopowerlaw 2018-06-21 22:47:51 +02:00
Martin Diehl 367e6a4eee consistent string length (de-facto standard 65536) 2018-06-21 22:39:18 +02:00
Martin Diehl bed9220597 consistent string name and more verbose "prm" for shortcut parameters 2018-06-21 22:38:48 +02:00
Martin Diehl f61f22924a empty string list as default value simplifies logic 2018-06-21 22:38:06 +02:00