Philip Eisenlohr
0805445ea8
exchanged x/z dimension in XDMF writing
2021-06-18 10:17:39 -04:00
Martin Diehl
db1882e4de
polishing
2021-06-17 18:26:37 +02:00
Martin Diehl
f19dc27246
transition compatibility
2021-06-16 14:35:54 +02:00
Martin Diehl
9b1f5c7783
testing new functionality for Neper / vti
2021-06-15 23:19:08 +02:00
Martin Diehl
01a32ea236
import from Neper
2021-06-15 22:29:28 +02:00
Martin Diehl
1bfbd30ae2
polishing
2021-06-15 19:53:05 +02:00
Martin Diehl
218e6a79a8
VTK image data is the appropriate type, not VTK rectilinear grid
...
FFTs require constant spacing in all three directions, this is
guaranteed by the vtkImageData but not by vtkRectilinearGrid
2021-06-15 19:02:26 +02:00
Martin Diehl
5202da13ea
better not have a "Lattice" object with "lattice" parameter
2021-06-07 21:49:04 +02:00
Martin Diehl
41e5f0c06c
re-introduced multiple inheritance
2021-06-06 22:25:42 +02:00
Martin Diehl
0722f4f754
disable if not possible
2021-06-03 11:22:28 +02:00
Martin Diehl
3c8d06b6f1
encapsulating all lattice(-family) related data
2021-06-03 11:18:00 +02:00
Martin Diehl
4701eea10f
decoupling Orientation and Lattice/LatticeFamily
2021-06-03 10:02:49 +02:00
Martin Diehl
03d3f362e6
equality checks
...
note: doing this type of comparison means:
- LatticeFamily('cubic') == Lattice('cF')
- Lattice('cF') != LatticeFamily('cubic')
we have the same behavior for comparison between Orientation and
Rotation
2021-06-03 09:38:43 +02:00
Martin Diehl
3b150ddbea
simplified/separated
2021-06-03 09:22:54 +02:00
Martin Diehl
87e94b6cf4
sorting
...
most functions require only lattice family, functions that require full
lattice details are at the end
2021-06-03 08:43:56 +02:00
Martin Diehl
302da1f76a
separating functionality
2021-06-02 17:11:37 +02:00
Martin Diehl
b55d51491d
separating functionality
2021-06-02 08:48:45 +02:00
Martin Diehl
e281d8384f
distinguish 'family' and 'lattice'
...
this requires the user to specify a keyword ('*' notation in __init__).
Since all 'from_xxx' methods anyway require a keyword, it does not
causes much more work (one explicit keyword in case of cube orientation
when using __init__ directly).
2021-06-01 21:51:28 +02:00
Martin Diehl
684016f3e3
utility function without connection to an object
2021-06-01 21:29:35 +02:00
Martin Diehl
6f9e521cdb
Merge branch 'HDFgeometryupdate' into 'development'
...
HDF geometry update
See merge request damask/DAMASK!395
2021-06-01 08:01:53 +00:00
Martin Diehl
bd10ee033e
dealing with user errors/incomplete files
2021-06-01 06:51:44 +02:00
Philip Eisenlohr
02256be8dc
Merge branch 'rotation-couple-kinematics' into 'development'
...
avoid static methods
See merge request damask/DAMASK!393
2021-05-31 15:55:36 +00:00
Francisco Jose Gallardo Basile
0ef5825d35
Merge branch 'Results.add_grid_filters' into 'development'
...
Result.add_xxx for functions on regular grids
See merge request damask/DAMASK!394
2021-05-31 05:46:06 +00:00
Sharan Roongta
d1a6607782
Merge branch 'load2Dtensor' into 'development'
...
support for 2D tensor in load case
See merge request damask/DAMASK!391
2021-05-29 13:21:47 +00:00
Martin Diehl
94b6be4e83
preferred way to say that something needs to be implemented
2021-05-29 10:54:34 +02:00
Martin Diehl
f435a1bea4
include in documentation
2021-05-28 21:06:02 +02:00
Martin Diehl
46dc6b4dab
functionality to add field data on regular grids
...
allows to add curl, divergence, and gradient to results from the grid
solver
2021-05-28 15:38:00 +02:00
Martin Diehl
e431d89957
polishing
2021-05-28 13:20:56 +02:00
Martin Diehl
dd4612dd9b
support singular names
...
e.g. self.iterate('phase')
2021-05-28 08:06:58 +02:00
Martin Diehl
89fc2f05cf
no need to attach static data
...
if needed, a 'kinematics' function that provides slip direction and
plane normal rotated according to the orientation would be helpful
2021-05-27 20:23:22 +02:00
Martin Diehl
bfc3fe410f
no direct connection to Orientation object
2021-05-27 19:10:23 +02:00
Martin Diehl
f7e1aad147
single source of truth
2021-05-27 18:44:20 +02:00
Martin Diehl
545a085c93
no need to hide, just add suffix to avoid clash with string argument
2021-05-27 18:41:42 +02:00
Martin Diehl
adb1e51e24
support for 2D tensor in load case
...
currently optional, but should become mandatory after a transition
period
2021-05-26 08:04:14 +02:00
Martin Diehl
40698740aa
fixed symmetry handling
...
- ort not tested, no examples, no documentation => removed
- aP is the opposite of isotropic => removed
isostropic materials can be easily specified as cI or cF, using C_44 =
1/2 * (C_11 - C_12). Acceptable extra effort for special use case
orthorhombic can be easily implemented if needed, but needs test,
documentation, and examples
2021-05-24 15:45:25 +02:00
Martin Diehl
0b80252d97
Merge remote-tracking branch 'origin/123_bccSlipSystem' into development
2021-05-22 22:40:33 +02:00
Sharan Roongta
fa3b077b72
Merge remote-tracking branch 'origin/development' into internal-restructure
2021-05-21 12:32:59 +02:00
f.basile
10c6070873
added {123} slips systems of bcc
2021-05-20 18:45:15 +02:00
Sharan Roongta
125e8fb9e2
Merge remote-tracking branch 'origin/development' into internal-restructure
2021-05-20 10:41:59 +02:00
Sharan Roongta
edb7834404
typo
2021-05-20 10:30:00 +02:00
Martin Diehl
2648464525
relax tolerances for quaternion initialization
...
we read in ASCII/YAML files, 1e-8 must be enough
2021-05-19 09:46:02 +02:00
Martin Diehl
85ecb68b8f
Merge remote-tracking branch 'origin/development' into MatrixInteraction_clean
2021-05-11 06:00:16 +02:00
Philip Eisenlohr
d6e69d5d4b
[skip ci] polishing of doc string
2021-05-10 14:44:58 -04:00
Martin Diehl
053c427509
adjusting to new interaction matrices
2021-05-09 14:50:55 +02:00
Martin Diehl
bc8a03b392
Merge branch 'python-polishing' into lattice-into-orientation
2021-05-07 22:04:25 +02:00
Martin Diehl
9c9286a4be
no connection to the class
2021-05-07 21:51:11 +02:00
Martin Diehl
cb8dbf6eda
simplified
2021-05-07 21:33:48 +02:00
Martin Diehl
a48fa5d797
better readable and documented
2021-05-07 20:07:59 +02:00
Martin Diehl
8626f6c047
hide imported modules in autocompletion
2021-05-06 15:00:03 +02:00
Martin Diehl
b1ad8197f2
object oriented approach
...
Orientation (of special lattice) should not have generic attributes
Also, import at the beginning of the file
2021-04-29 20:59:54 +02:00
Martin Diehl
b061b4911d
compatible with older scipy versions
2021-04-29 08:58:32 +02:00
Martin Diehl
3c41cd609f
Merge branch 'development' into env-reporting
2021-04-29 08:40:29 +02:00
Martin Diehl
00bc6a9031
4 threads as default. Reasonable for modern computers
...
hardcoded + and as shell variable
2021-04-28 20:26:25 +02:00
Martin Diehl
ff8ce3840b
handle infinite loop
2021-04-28 08:03:22 +02:00
Philip Eisenlohr
e9cfb2f968
Merge branch 'drop-old-DADF5-support' into 'development'
...
Improvements to damask.Result
See merge request damask/DAMASK!373
2021-04-27 00:33:41 +00:00
Philip Eisenlohr
ba938f1746
need to check for isinstance(int)
2021-04-26 17:56:15 -04:00
Philip Eisenlohr
5567512f73
removed unnecessary f-strings; added any -x to increments view
2021-04-26 14:26:16 -04:00
Philip Eisenlohr
b1bbe5528b
[skip ci] fixed mistake (R --> Q) in example
2021-04-26 17:09:11 +00:00
Franz Roters
55333f7e3e
Merge branch 'no-shell-variables' into 'development'
...
KISS: no shell variables
See merge request damask/DAMASK!370
2021-04-26 15:48:58 +00:00
Martin Diehl
de79d2d897
test handling of Marc results
2021-04-26 00:28:39 +02:00
Martin Diehl
62c987badf
add tracer to vtk files
2021-04-25 23:54:33 +02:00
Martin Diehl
68a839ed97
typo + improved help
2021-04-25 22:14:13 +02:00
Martin Diehl
d4a46b9be8
Merge remote-tracking branch 'origin/development' into drop-old-DADF5-support
2021-04-25 17:34:14 +02:00
Martin Diehl
0459f17f58
improved usability
2021-04-25 07:58:15 +02:00
Martin Diehl
18aa6f7f12
support for string arrays
...
allows to add phase label from mapping. Only scalar string arrays are
allowed (no real restriction)
2021-04-24 22:50:59 +02:00
Martin Diehl
6e1fe712c7
Merge branch 'python-documentation' into drop-old-DADF5-support
2021-04-24 19:39:28 +02:00
Philip Eisenlohr
690b478013
[skip ci] language polishing
2021-04-24 13:12:44 -04:00
Martin Diehl
24046ef683
support the user
2021-04-24 18:00:57 +02:00
Martin Diehl
95831e53f6
using improved documentation
2021-04-24 16:23:34 +02:00
Martin Diehl
3977e230b3
documenting and ensuring consistent argument names
...
'name' for a dataset matches the analogy to a file name
2021-04-24 14:47:45 +02:00
Martin Diehl
4d67c85a33
clarify out-of-place behavior and document return values
2021-04-23 23:32:09 +02:00
Martin Diehl
26f37d822d
state return value
...
not for Rotation as its docstring is extended by Orientation
2021-04-23 19:15:11 +02:00
Martin Diehl
6699f2ee5f
don't use shell variables
...
Marc solver can be controlled in python, installation can be tuned with
CLI arguments
2021-04-22 12:02:53 +02:00
Martin Diehl
3f8bd645d8
handle the case that MSC-related variables are not set
2021-04-22 07:55:41 +02:00
Martin Diehl
190ddafa44
don't support old file formats
2021-04-14 23:23:32 +02:00
Martin Diehl
0e6cb127df
damage can be defined in parts of the domain ...
2021-04-14 19:24:45 +02:00
Sharan Roongta
1be1a72a09
Merge branch 'Fortran-cleaning' into 'development'
...
Clarifying structure
See merge request damask/DAMASK!368
2021-04-13 11:08:18 +00:00
Martin Diehl
cfbb2d416f
better example
2021-04-10 23:58:53 +02:00
Martin Diehl
1133090b6c
logfile does not contain much valuable information
...
Marc automatically creates .out
2021-04-10 23:50:20 +02:00
Martin Diehl
37df78a8e0
don't show progress bar for empty iterations
2021-04-10 15:01:50 +02:00
Martin Diehl
d304654972
allow easy detection of empty view/get/place
2021-04-10 09:33:45 +02:00
Martin Diehl
07d573a56d
more helpful dataset descriptors
...
phase label for single phase material not helpful
2021-04-10 09:32:21 +02:00
Martin Diehl
44331c504b
__class__ is unknown (says prospector)
2021-04-10 08:29:42 +02:00
Martin Diehl
63b343ad87
Merge branch 'development' into allclose-rotation-orientation
2021-04-10 08:05:25 +02:00
Martin Diehl
e89236b14d
bugfix:
...
don't overwrite data when doing a 'place-like' operation to merge
datasets
2021-04-08 17:36:33 +02:00
Martin Diehl
2d8658822d
report return value
2021-04-08 14:58:22 +02:00
Martin Diehl
00aed99419
naming of tests should follow naming in class
2021-04-08 13:39:48 +02:00
Martin Diehl
bc1454970c
mandatory symmetry
...
if symmetry is not of interest, damask.Rotation should be used
2021-04-06 22:49:08 +02:00
Philip Eisenlohr
bf2515c4c1
removed `Grid.diff` in lieu of `__eq__`
2021-04-06 12:10:35 -04:00
Philip Eisenlohr
bf4c88a39e
renamed result.read to get; polishing
2021-04-06 11:39:44 -04:00
Martin Diehl
02277fb820
consistently return masked array
2021-04-05 22:18:18 +02:00
Martin Diehl
d5806075d4
distinguish isclose/allclose and __eq__
2021-04-05 22:15:03 +02:00
Martin Diehl
115e3dd4c7
simplified
2021-04-05 17:18:12 +02:00
Martin Diehl
faa9e6aa6a
open file only once
2021-04-05 15:58:10 +02:00
Martin Diehl
c3a7a85f7a
avoid repetition
2021-04-05 15:41:28 +02:00
Martin Diehl
9db1ef9ed7
polishing
2021-04-05 13:41:49 +02:00
Martin Diehl
65b03aeb2d
Merge remote-tracking branch 'origin/development' into Results.read-.place
2021-04-05 10:22:49 +02:00
Martin Diehl
62c85db745
out of place behavior
2021-04-05 08:03:00 +02:00
Martin Diehl
fc409fcf08
'join' is always linear in time, '+' not
2021-04-04 22:12:28 +02:00
Martin Diehl
1d6b56346a
use 'view' and standardized calling signature
2021-04-04 20:56:30 +02:00
Martin Diehl
0e5f693fea
untangling
2021-04-04 19:44:06 +02:00
Martin Diehl
e1d57f176d
simplifying
...
[] has a special meaning for glob, use () to indicate direction for IPF
color. It is anyways the sample direction, not a crystallographic
direction
2021-04-04 19:05:58 +02:00
Martin Diehl
d78e0085fc
simplified
2021-04-04 18:32:17 +02:00
Martin Diehl
a962777d24
avoid code duplication
2021-04-04 13:38:40 +02:00
Martin Diehl
6fef46539e
standard names
2021-04-04 13:16:14 +02:00
Martin Diehl
6f3dc80079
simplified/using new functionality
2021-04-03 16:32:48 +02:00
Martin Diehl
27f2e3b26e
avoid random order when using sets
2021-04-03 12:21:06 +02:00
Martin Diehl
885aeb62e5
geometry0 itself is useful
...
can be combined with 'place' if in-memory VTK is required for spatial
operations
2021-04-03 08:58:22 +02:00
Martin Diehl
39c0bc9de6
polishing
2021-04-03 08:19:16 +02:00
Martin Diehl
1b2d892b42
keep reference folder clean
2021-04-03 07:31:31 +02:00
Martin Diehl
20d0242d59
using new logic
2021-04-02 12:21:27 +02:00
Martin Diehl
e8ff509502
output all datasets per default
...
respect 'field' selection
2021-04-02 11:29:58 +02:00
Martin Diehl
18afa217fe
easier to understand
...
limit to same fields for homogenization and fields results in a little
less flexibility (requires two views) but should be acceptable for such
a little used feature
2021-04-02 08:24:49 +02:00
Martin Diehl
cf1ce6a1fe
support for masked array
...
masked arrays are the outcome of Result.place
2021-04-02 08:07:22 +02:00
Martin Diehl
58ac99831c
polishing
2021-04-02 07:47:03 +02:00
Martin Diehl
9459fea929
support for pandas not planned any more
...
damask.Table supports multidimensional data, numpy.ma supports masked
arrays
2021-04-02 07:42:54 +02:00
Philip Eisenlohr
f6d6aefe1d
function renaming; rewording of help messages
2021-04-01 18:41:28 -04:00
Martin Diehl
84e117c6b3
polished and added tests
2021-04-01 17:26:51 +02:00
Martin Diehl
71d1a341e4
simplified
2021-04-01 15:08:48 +02:00
Martin Diehl
4b9fcf2f77
testing new read functionality
2021-04-01 14:55:50 +02:00
Martin Diehl
85aaaa96f3
new tests
2021-04-01 10:47:45 +02:00
Martin Diehl
2397df88f9
documenting
2021-04-01 07:21:34 +02:00
Martin Diehl
c1f7ea750b
legacy access not needed anymore
2021-04-01 06:55:47 +02:00
Martin Diehl
8a3af87e3e
Merge remote-tracking branch 'origin/development' into spring-cleaning
2021-04-01 00:09:51 +02:00
Philip Eisenlohr
07c9cf5f1a
- improved reporting and slicing of table.
...
- implemented numpy-like `allclose` and `isclose`
2021-03-31 18:30:07 +00:00
Martin Diehl
8a8a28adc4
support multi-constituents
2021-03-31 20:02:25 +02:00
Martin Diehl
be444b69ca
include homogenization
2021-03-31 15:44:27 +02:00
Martin Diehl
97e6c397d9
cleaned
2021-03-31 15:10:39 +02:00
Martin Diehl
7b678af1b4
float and int are different
2021-03-31 12:40:53 +02:00
Martin Diehl
8c7ee5e796
simplified
2021-03-31 12:05:51 +02:00
Martin Diehl
e9c65dee73
documenting and testing
2021-03-31 10:59:21 +02:00
Martin Diehl
7b846efe4a
arguments can be int, bool, str
2021-03-31 08:12:57 +02:00
Martin Diehl
eebb050a64
simplified
...
place seems to work
2021-03-31 07:56:42 +02:00
Martin Diehl
60119c1300
return minimal unique dictionaries per default
2021-03-30 21:39:14 +02:00
Martin Diehl
989992004d
cleaning dicts
2021-03-30 19:41:36 +02:00
Martin Diehl
7865092b82
not needed
2021-03-30 17:24:19 +02:00
Martin Diehl
b9b66fac45
simplified
2021-03-30 17:15:02 +02:00
Martin Diehl
d1af4b031a
source for python-compatible versioning
2021-03-30 17:02:57 +02:00
Martin Diehl
b19ec4f8ae
first ideas for more user friendly usage
2021-03-30 07:24:47 +02:00
Martin Diehl
3fe1accf18
not used anymore
2021-03-28 19:48:44 +02:00
Martin Diehl
5ea2fa97a0
untested and unused code
2021-03-28 12:46:26 +02:00
Martin Diehl
a587e70704
split into small sections and test damage
2021-03-28 12:08:08 +02:00
Martin Diehl
a3ab890315
bugfix for ConfigMaterial
...
don't use mutable variables in python initializers, they get updated
2021-03-28 11:35:40 +02:00
Martin Diehl
480b8315a7
cleaning + testing
2021-03-27 15:54:29 +01:00
Martin Diehl
8a99306aed
old table not needed anymore
2021-03-27 14:34:18 +01:00
Martin Diehl
c742f7c9d0
need to cope with _asciitable.py and _test.py
2021-03-27 12:47:58 +01:00
Martin Diehl
be9e00347b
cleaning
...
dropped support for legacy table
2021-03-27 10:11:31 +01:00
Martin Diehl
111a1a76c6
cleaning
2021-03-27 07:35:49 +01:00
Martin Diehl
9fd244d8a0
cleaning
2021-03-26 20:59:49 +01:00
Martin Diehl
3e8bcd3225
cleaning examples, using consistent names
...
- examples in repository should only show the most basic steps
- MSC.Marc, marc => Marc
2021-03-26 09:27:49 +01:00
Martin Diehl
9e9eb391ba
handle floating point errors
2021-03-25 22:33:14 +01:00
Martin Diehl
a72e2db678
Merge branch 'development' into output-rename
2021-03-25 21:03:20 +01:00
Philip Eisenlohr
3d4590a522
Merge branch 'citation-style' into development
2021-03-25 14:39:44 -04:00
Philip Eisenlohr
0e57135239
[skip ci] dx.doi.org --> doi.org
2021-03-25 14:33:08 -04:00
Martin Diehl
3b392281e4
consistent naming in HDF5 output
2021-03-25 19:22:59 +01:00
Martin Diehl
fe0cd8e5e2
transparently handle orientations/rotations
2021-03-25 15:30:31 +01:00
Martin Diehl
1ff6a09746
tests/specifications
2021-03-23 18:51:21 +01:00
Martin Diehl
572c3204d0
let the computer do the work
2021-03-23 14:28:56 +01:00
Martin Diehl
e0e088eaa8
EBSD dataset for testing
...
use only non-segmented data. Automatically fall back to numeric phase
names if cell_ensemble_data is not found
2021-03-23 13:42:04 +01:00
Martin Diehl
549b849730
better readable
2021-03-23 12:05:08 +01:00
Martin Diehl
926b5c657d
material_add can do expansion
2021-03-23 12:01:35 +01:00
Vitesh Shah
005fde2504
homogenization in material was missing
2021-03-23 11:48:35 +01:00
Martin Diehl
7012099d0c
substituted broken link
2021-03-20 14:34:14 +01:00
Martin Diehl
1c3d1ee0f2
documented
2021-03-20 13:37:06 +01:00
Martin Diehl
394fda5f37
improving import from DREAM.3D
...
- no duplicated entries even for non-segmented data
- using phase labels from file
- material.yaml: Dummy homogenization and phase
- tests to ensure correct order and match between Grid and
ConfigMaterial
2021-03-20 12:56:18 +01:00
Martin Diehl
cdcedd0d44
autodetect base group
2021-03-20 07:26:07 +01:00
Martin Diehl
35c5bfcc45
reference files for DREAM.3D operations
...
will be used for the configuration of material.yaml and grid (using
symbolic links)
2021-03-19 11:45:04 +01:00
Sharan Roongta
fc172921fb
unified citation style continued
2021-03-19 10:41:47 +01:00
Martin Diehl
07d79ef4ba
unifying style
2021-03-17 11:25:21 +01:00
Martin Diehl
ec28fd8a73
polishing
2021-03-12 09:23:05 +01:00
Martin Diehl
3b27c64709
Merge remote-tracking branch 'origin/development' into config_from_dream3D
2021-03-12 08:11:54 +01:00
Philip Eisenlohr
e2d4ab427e
explicit path joining with "/" in _result; updated cpTi CRSS
2021-03-09 22:02:49 -05:00
Philip Eisenlohr
a26e586b14
More general 'delete' (accepts iterables) and backports of '|' and '|=' for union/add.
...
'|=' would work for python 3.9 without extra code, but '|' unfortunately casts 'damask.Config' (subclass of 'dict') to a 'dict'.
2021-03-09 19:15:15 +00:00
Philip Eisenlohr
4208c4e713
adapted to Table.add being out-of-place
2021-03-08 11:04:49 -05:00
Philip Eisenlohr
7cbc69a4ca
added "Returns" to help
2021-03-08 11:02:27 -05:00
Philip Eisenlohr
109ad378c2
corrected help text of as_Rodrigues_vector
2021-03-02 16:26:18 +01:00
Franz Roters
7b89cb41f9
Merge branch 'dislotwin-correction' into 'development'
...
dislotwin-correction
See merge request damask/DAMASK!347
2021-02-28 19:45:34 +00:00
Philip Eisenlohr
464c62e7e7
abandoned integer aliases for projection directions
2021-02-28 12:47:13 +01:00
Philip Eisenlohr
175d724ded
added keepdims=False option to project_stereographic
2021-02-27 18:38:40 -05:00
Philip Eisenlohr
ea763fd941
generalized stereographic projection to cope with all three directions (x,y,Z)
2021-02-27 11:15:01 -05:00
Martin Diehl
bf223e8e00
helpful reporting in case of errors
2021-02-26 06:35:42 +01:00
Philip Eisenlohr
1d62341811
Fixed missing second-to-last entry in representation list. Polished help texts.
2021-02-26 03:20:28 +01:00
Sharan Roongta
c0e488881e
converted two examples to yaml
2021-02-24 20:13:55 +01:00
Philip Eisenlohr
2549d7a05a
[skip ci] removed debug print statement
2021-02-24 15:50:06 +01:00
Philip Eisenlohr
2dea705fa9
polishing/shortening
2021-02-23 19:01:10 -05:00
Philip Eisenlohr
0b08b3d233
expanded help texts
2021-02-23 18:54:55 -05:00
Philip Eisenlohr
dcc42204ec
expanded help on material_add
2021-02-23 18:40:32 -05:00
Philip Eisenlohr
69316f186b
fixed ConfigMaterial.from_table; 2D grid.from_table now acceptable
2021-02-23 11:50:13 -05:00
Philip Eisenlohr
4a00254dba
shortened material_add and allow for multi-constituent; broken from_table...
2021-02-22 22:47:08 -05:00
Martin Diehl
0461c404f7
numpy uses __array__ for casting
...
avoids infinite loop of __init__, __getitem__, and shape. Found on
8cf07f6113
2021-02-22 18:52:06 +01:00
Martin Diehl
5517be5078
warn the caller of deprecated functions
2021-02-22 08:49:44 +01:00
Martin Diehl
67f0ab2ce8
silence deprecation warning
2021-02-22 08:46:28 +01:00
Martin Diehl
b00b4bb0ad
more general handling of precision
...
Anaconda on windows does not have np.float128 defined, but aliases
should work
https://numpy.org/devdocs/user/basics.types.html
2021-02-19 17:03:41 +01:00
Martin Diehl
f5f993435b
make intention clear
2021-02-19 16:34:28 +01:00
Martin Diehl
ab9661d951
don't see how ':=' should help here
2021-02-19 07:04:34 +01:00
Martin Diehl
7c6ce525a3
ask for minimum version
2021-02-19 06:51:32 +01:00
Philip Eisenlohr
f609b61157
Merge branch 'development' into account-for-floating-point-precision-in-orientation
2021-02-15 16:26:25 -05:00
Philip Eisenlohr
6bbd55d967
exchanged c for x in from_cubochoric
2021-02-15 16:25:36 -05:00
Philip Eisenlohr
002cfbd085
Merge branch 'account-for-floating-point-precision-in-orientation' into 'development'
...
ensures that at least one orientation in the FZ is found
See merge request damask/DAMASK!337
2021-02-15 20:53:37 +00:00
Philip Eisenlohr
89e8ca4535
renamed and shortened _separate_arguments()
2021-02-15 11:22:42 -05:00
Sharan Roongta
099cd90890
Merge remote-tracking branch 'origin/development' into python-improvements
2021-02-13 16:51:29 +01:00
Martin Diehl
fe63adcca4
mimic python error message and ensure that error is raised
2021-02-12 18:20:39 +01:00
Sharan Roongta
9e8a243d6f
avoid name conflict with lattice parameter 'c'
2021-02-12 12:15:08 +01:00
Sharan Roongta
f1b8978e21
accept variables that will be used
...
**kwargs allowed the use of extraneous arguments
2021-02-12 11:24:12 +01:00
Martin Diehl
958936c449
Merge branch 'development' into polishing-for-release
2021-02-11 21:59:59 +01:00
Martin Diehl
e8fae6b2a7
simplified
2021-02-11 21:56:53 +01:00
Martin Diehl
4e31862f0f
avoid repetition
2021-02-10 18:35:13 +01:00
Martin Diehl
6895ef6b18
always write LF line endings
...
small pitfall: I windows users use a filehandle that results from a call
to open() without the newline option, they get still CRLF line endings
2021-02-10 10:03:35 +01:00
Martin Diehl
4bcbcb34d0
ensures that at least one orientation in the FZ is found
2021-02-09 23:58:00 +01:00
Martin Diehl
869307c5ec
temperature not needed for pure mechanics
...
would also require to define thermal homogenization
2021-02-08 22:56:37 +01:00
Sharan Roongta
cab5a5cec7
homogenization 'none' name misleading.
2021-02-04 15:37:40 +01:00
Sharan Roongta
14ce127dc4
fraction --> v
2021-02-04 13:46:01 +01:00
Martin Diehl
051e3ed0ae
not needed anymore
2021-02-02 12:26:08 +01:00
Martin Diehl
0f6094890a
simplified
...
damask.environment does not offer any advantage over os.environ for
variables. After 'root_dir' was removed, the whole module became
obsolete
2021-01-15 12:14:05 +01:00
Martin Diehl
37de561938
shell variables are more robust
...
they will also work if Fortran and python code are installed in
different locations.
2021-01-13 18:53:16 +01:00
Martin Diehl
d76543f759
better name
2021-01-13 14:57:58 +01:00
Martin Diehl
a7d998dd48
standard name
2021-01-13 14:53:50 +01:00
Martin Diehl
4c35da8627
simplified
2021-01-13 11:33:28 +01:00
Martin Diehl
196902948f
simplified
2021-01-13 09:54:04 +01:00
Martin Diehl
f4247e0f35
simpler (and scipy compatible)
2021-01-13 09:35:42 +01:00
Philip Eisenlohr
2d6e6a2370
Rotation composition uses "*"; application of Rotation to object uses "@"; "apply()" works on both
2021-01-12 18:57:33 -05:00
Vitesh Shah
c3c4b05c01
handling point based data enabled
2021-01-12 13:01:11 +01:00
Vitesh Shah
6bffb91951
Added example
2021-01-11 15:16:46 +01:00
Vitesh Shah
6c367ec010
conform to docstring conventions
2021-01-11 15:05:48 +01:00
Vitesh Shah
2951617e28
able to take phaseID into account
2021-01-11 15:02:15 +01:00
Vitesh Shah
dbab3c3a83
dream3D has an extra row at start for grain based data
2021-01-11 14:21:56 +01:00
Vitesh Shah
028d47034d
conversion from dream3D for single phase materials
2021-01-11 13:31:08 +01:00
Philip Eisenlohr
f0351e403a
removed duplicate test
2021-01-07 11:01:15 -05:00
Philip Eisenlohr
bde66d85fc
Merge branch 'development' into python-improvements
2021-01-07 10:58:33 -05:00
Philip Eisenlohr
94cfe28128
polishing help; Rotation.apply(Rotation) now acceptable.
2021-01-06 18:03:10 -05:00
Martin Diehl
acbb564afc
restored functionalitity for adding list.
...
got accidently lost
2021-01-04 07:23:14 +01:00
Martin Diehl
d8b4b7e0f5
!= and == work componentwise
2021-01-03 21:52:19 +01:00
Martin Diehl
f48a446353
compatible with scipy.spatial.transform.Rotation
...
also introduced inplace variants and '/' as multiplicative inverse of
'*'
2021-01-03 16:08:22 +01:00
Martin Diehl
98723cb0ed
need to handle special case of Re() = 0
...
ensuring that the real part is positive seems to be a good idea on first
sight, but it would be easier to simply acknowledge that qu = -qu
2021-01-03 15:50:15 +01:00
Martin Diehl
80b8693a66
avoid adding to existing data, i.e. when reading a file
2021-01-03 12:10:39 +01:00
Martin Diehl
5f1399acc3
consistent behavior with other classes
...
python dictionary operates in-place, so wrappers for out-of-place
behavior let it use like the other DAMASK classes
2021-01-03 12:09:21 +01:00
Martin Diehl
9a278daa3f
copy not needed
...
YAML writer does not write out references anymore
2021-01-03 12:07:02 +01:00
Martin Diehl
35ca1ffb0a
consistent copy functionality
2021-01-03 12:03:40 +01:00
Martin Diehl
6fe1ff8e39
fixed test for rodrigues parametrization
...
for angle close to 180deg, the sign of the axis does not matter
2021-01-03 11:50:45 +01:00
Philip Eisenlohr
da62daf15d
added test for appending rotation lists; better check for type==list
2020-12-28 12:26:09 -05:00
Philip Eisenlohr
4796afdd92
fix for broken representation of no-rotation orientations and averaging weights
2020-12-28 12:10:21 -05:00
Philip Eisenlohr
d8b57680ec
raise NotImplemented when using R*b instead of R@b
2020-12-21 15:47:18 -05:00
Sharan Roongta
6cc78cb41e
Merge branch 'misc-improvements' into 'development'
...
Misc improvements
See merge request damask/DAMASK!302
2020-12-18 15:19:04 +01:00
Martin Diehl
35f9861818
Fortran standard is 2018
...
will not work for older compilers
2020-12-18 15:19:04 +01:00
Martin Diehl
5fb0e4908b
Examples reflect actual behavior
2020-12-18 07:09:05 +01:00
Philip Eisenlohr
403ac693da
need to pass init argument to dict superclass
2020-12-17 18:08:55 -05:00
Philip Eisenlohr
e11be7e600
preinitialize a ConfigMaterial object with 'constituents','homogenization','phase' keys
2020-12-17 10:49:33 -05:00
Martin Diehl
2dd520b4a2
P_aim should be independent from P_av
...
P_av is not defined after restart or cutback. Restart with change of
load case is probably still an issue
2020-12-15 08:06:50 +01:00
Martin Diehl
aad123f41b
Merge branch 'table-getitem' into development
2020-12-12 19:58:42 +01:00
Philip Eisenlohr
36e4042f0b
removed "where" method from Table class
2020-12-11 19:31:19 -05:00
Martin Diehl
2e28bc127a
better message in case that GUI is not possible
2020-12-10 23:44:54 +01:00
Martin Diehl
a881e6e57a
Merge remote-tracking branch 'origin/development' into misc-improvements
2020-12-10 23:41:59 +01:00
Martin Diehl
32c2de6b91
Ensuring regular spacing for grid
2020-12-10 22:47:30 +01:00
Martin Diehl
4286fc3b82
Merge branch 'development' into misc-improvements
2020-12-10 20:21:00 +01:00
Martin Diehl
9b6f5ba9c6
Merge branch 'development' into compressed-hdf5
2020-12-10 00:23:22 +01:00
Martin Diehl
de1708b20a
missing renames + better help
2020-12-08 00:36:41 +01:00
Martin Diehl
78192ef3fd
clearer naming + better comments, thanks to @p.eisenlohr
2020-12-07 17:49:37 +01:00
Martin Diehl
429b84004d
more filters
...
- shuffle: significanlty better compression
- Fletcher32: checksum to detect errors
computational overhead is very small
2020-12-06 19:57:00 +01:00
Martin Diehl
52e3fb50bc
compress.
...
Datasets are chunked along first timension. Chunk size (1MB for real) is
probably not optimal
2020-12-06 11:44:52 +01:00
Martin Diehl
000de75617
write orientation as plain array, not derived type
2020-12-06 08:36:16 +01:00
Martin Diehl
c80e1c5420
less confusing in the standard case, more helpful in the special case
2020-12-05 10:47:42 +01:00
Martin Diehl
ed286ee09f
Merge branch 'rename-grid-2' into misc-improvements
2020-12-05 09:50:46 +01:00
Martin Diehl
171d642dbd
rename: Geom -> Grid
2020-12-04 07:50:47 +01:00
Martin Diehl
0fdefa5e78
renames:
...
after the rename of "grid" to "cell", the name cell should not be used
for the coordinates of the cell centers. In agreement with the names
x_p/u_p for point positions/displacements, now the "point" is used to
refer to the materialpoints (i.e. cell centers)
Additionally, "_node"/"_point" are now suffixes to
"coordinates"/"displacements".
Finally, "coords" is renamed to "coordinates"
2020-12-03 23:59:37 +01:00
Martin Diehl
ac0a20696c
rename: grid -> cells
2020-12-03 22:16:34 +01:00
Philip Eisenlohr
ccf1a849fa
Merge branch 'ShowGrainBoundaries' into 'development'
...
Show grain boundaries
See merge request damask/DAMASK!297
2020-12-03 17:13:15 +01:00
Philip Eisenlohr
4877334986
added getitem and where functionality to Table
2020-12-02 19:25:54 -05:00
Philip Eisenlohr
97df1ab9b3
reinstated write functionality
2020-12-02 13:04:56 -05:00
Martin Diehl
d3a5979d25
meaningful result
2020-12-02 14:45:47 +01:00
Martin Diehl
c880052250
avoid evil eval
2020-12-02 14:37:44 +01:00
Martin Diehl
aa8f30d746
Merge branch 'development' into ShowGrainBoundaries
2020-12-02 12:50:04 +01:00
Martin Diehl
1c2cdbd5a1
support of all standard numpy types
...
+ tests
2020-11-30 12:33:21 +01:00
Martin Diehl
813ef927c4
consistent with "save_XDMF" (capitalized)
2020-11-30 09:28:46 +01:00
Martin Diehl
4d2bf37193
Merge branch 'lattice-structure-rename' into ShowGrainBoundaries
2020-11-29 20:53:58 +01:00
Martin Diehl
1d05edd7b3
fixes:
...
- need to get crystal structure as attribute in test (generic function
was removed, because the crystal structure is in general not the same
over the whole domain)
- consistent sorting of attributes
2020-11-29 09:06:47 +01:00
Martin Diehl
f48f5cb0e8
bugfix/better readable
2020-11-29 08:58:48 +01:00
Martin Diehl
c712332e87
using consistent names for Bravais lattice in Fortran and Python
2020-11-28 22:38:12 +01:00
Martin Diehl
a8da1e5ed9
Paraview 5.9 supports datasets of arbitrary length in XDMF
2020-11-27 22:57:15 +01:00
Martin Diehl
3c1f1af009
more then one direction in file
2020-11-27 20:16:06 +01:00
f.basile
c2be41b9f6
remove import vtk because unused
2020-11-25 12:53:29 +01:00
f.basile
31df4c04c8
added test
2020-11-25 12:51:52 +01:00
f.basile
eb085958f8
polishing
2020-11-25 11:32:07 +01:00
f.basile
cd58278a01
returns vtk object
2020-11-25 10:39:58 +01:00
f.basile
7abc32b09c
alternative for if d_s== , not sure it improves the previous
2020-11-24 19:59:46 +01:00
f.basile
c8b1f8d9f1
shortest possible way i found to include directions in an elegant way
2020-11-24 17:49:58 +01:00
Francisco Jose Gallardo Basile
030062d293
Merge branch 'unit-in-vtk' into 'development'
...
Unit in vtk
See merge request damask/DAMASK!288
2020-11-24 16:21:01 +01:00
Martin Diehl
7fa98ef084
DEcode bytes into str
2020-11-23 20:17:04 +01:00
Martin Diehl
5ab2847b36
polishing
2020-11-23 20:06:34 +01:00
Martin Diehl
cbe8160e13
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-23 19:55:34 +01:00
Martin Diehl
f85dba2835
small polishing
2020-11-23 19:43:19 +01:00
Martin Diehl
287d44c5df
Merge remote-tracking branch 'origin/development' into unit-in-vtk
2020-11-23 19:19:02 +01:00
Franz Roters
7356330cf6
Merge remote-tracking branch 'origin/new_names_result' into development
2020-11-23 11:49:15 +01:00
Sharan Roongta
c58f9f23a1
read old version while resolving merge conflicts
2020-11-22 14:32:32 +01:00
Sharan Roongta
24fabdec22
Merge branch 'development' into vector-mechanics
2020-11-22 12:02:29 +01:00
Martin Diehl
2de3a6a205
fits better to stretch_left/right
2020-11-19 22:46:52 +01:00
Martin Diehl
a87596cefc
return rotation type (ensures proper rotation)
2020-11-19 22:36:19 +01:00
Philip Eisenlohr
662a033d91
adapted to VTR geom files
2020-11-19 14:26:15 -05:00
Philip Eisenlohr
a82b1adc14
Merge branch 'geom-load-ASCII-autoshift' of magit1.mpie.de:damask/DAMASK into geom-load-ASCII-autoshift
2020-11-19 12:24:09 -05:00
Martin Diehl
a4b5c2a537
shorter (but still self-explanatory) name
2020-11-19 15:20:44 +01:00
Martin Diehl
6e5cb60132
general tensor functionality
2020-11-19 15:16:01 +01:00
Martin Diehl
894a8de9f9
avoid name clash: as_Rodrigues_vector(vector = ...)
2020-11-19 14:31:14 +01:00
Martin Diehl
1c07152b96
sorted alphabetically
2020-11-19 14:05:59 +01:00
Martin Diehl
20d0732b2e
output unit to XDMF/vtk
2020-11-19 13:45:40 +01:00
Martin Diehl
af3a87b197
adjust to new auto-convert of 1-based geom files
2020-11-19 11:34:55 +01:00
Martin Diehl
5a5dd24687
removed aliases
2020-11-19 10:50:14 +01:00
Martin Diehl
903c185ee6
distinguish 'file not found' and 'invalid file'
2020-11-19 10:39:41 +01:00
Martin Diehl
c74e57f225
vtk error handling is not very helpful
2020-11-19 09:59:39 +01:00
Martin Diehl
96826dca73
Geom.load_ASCII now auto-shifts material indices
2020-11-19 09:40:19 +01:00
Philip Eisenlohr
cb22c34db2
Geom.load_ASCII now auto-shifts material indices
2020-11-18 18:25:25 -05:00
Martin Diehl
b9b26cb2cc
output results for all constituents
2020-11-18 23:36:02 +01:00
Martin Diehl
5359e05fd3
always merge homogenization results
2020-11-18 23:17:12 +01:00
Martin Diehl
b885e38b3f
better readable
2020-11-18 22:12:23 +01:00
Martin Diehl
4bf802a28e
fixed documentation
2020-11-18 21:51:37 +01:00
Martin Diehl
843d7d8cac
Merge remote-tracking branch 'origin/development' into new_names_result
2020-11-18 21:37:52 +01:00
Martin Diehl
7352431143
vectorized
2020-11-18 20:10:04 +01:00
Martin Diehl
564ee6c96a
make uvw/hkl keyword-only arguments
...
avoid to prefer one over the other, since they are mutually exclusive
2020-11-18 16:45:53 +01:00
Martin Diehl
c60d9cde2a
merge 'mechanics' datasets
...
was like that for 'generic'. Needs detailed discussion in future
2020-11-18 15:52:55 +01:00
Martin Diehl
838a4ea592
[skip ci] fix for scalar values
2020-11-18 14:57:32 +01:00
Martin Diehl
870c0f7aca
removed aliases
...
required bump of DADF5 version
2020-11-18 14:53:11 +01:00
Martin Diehl
1c9028d0b1
simplified
2020-11-18 14:01:52 +01:00
Martin Diehl
89c748fdf1
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-18 13:55:05 +01:00
Martin Diehl
9a1e8e3c38
for the transition period
2020-11-18 13:28:53 +01:00
f.basile
7291b95055
avoid pyflake for blank line 6 final
2020-11-18 12:29:10 +01:00
f.basile
ee5822b721
avoid pyflake for blank line 5
2020-11-18 12:25:08 +01:00
f.basile
4dbfad74cb
avoid pyflake for blank line 4
2020-11-18 12:24:17 +01:00
f.basile
eda3837874
avoid pyflake for blank line 3
2020-11-18 12:21:09 +01:00
f.basile
c681101136
avoid pyflake for blank line 2
2020-11-18 12:19:47 +01:00
f.basile
33aa888fc7
avoid pyflake for blank line
2020-11-18 12:17:05 +01:00
f.basile
e8f82d52cc
fix bug
2020-11-18 12:16:08 +01:00
f.basile
be206d28b3
vectorized and more options
2020-11-18 12:14:12 +01:00
Martin Diehl
6bedd84759
self-explanatory names
2020-11-18 08:15:04 +01:00
Martin Diehl
cd8434b991
Merge remote-tracking branch 'origin/development' into python-improvements
2020-11-16 22:57:49 +01:00
Sharan Roongta
c16ad845bc
Merge branch 'modernize-testing' into 'development'
...
Modernize testing
See merge request damask/DAMASK!280
2020-11-16 20:10:38 +01:00
Martin Diehl
a8fec922d5
show name in title
2020-11-16 17:25:13 +01:00
Philip Eisenlohr
5a53f8743b
added to docstring
2020-11-16 10:44:33 -05:00
Philip Eisenlohr
fa25a13264
fixed typo
2020-11-16 10:34:49 -05:00
Philip Eisenlohr
de20e6b35d
code shortening; list_predefined() --> property "predefined"
2020-11-16 10:23:26 -05:00
Martin Diehl
5ebde607a2
einsum simplifications
2020-11-16 07:43:20 +01:00
Martin Diehl
9b9d83d93c
adding '_tensor' not needed
2020-11-16 01:15:39 +01:00
Martin Diehl
b893967b68
more systematic names and extended docstrings
2020-11-16 01:02:36 +01:00
Martin Diehl
6f81f5278d
separating general tensor math from mechanics operations
2020-11-16 00:13:34 +01:00
Martin Diehl
b3955573f6
using new tests
2020-11-15 22:39:47 +01:00
Martin Diehl
fd8743af5e
clearly distinguish seeds for tessellation and seeds for RNG
2020-11-15 13:49:17 +01:00
Martin Diehl
1541ac0add
more intuitive use
2020-11-15 12:38:54 +01:00
Martin Diehl
01d84c1477
testing also functions with graphical output
2020-11-15 11:49:52 +01:00
Martin Diehl
15af12bbb4
__ne__ is automatically set to !__eq__, __neq__ has no special meaning
2020-11-15 11:38:26 +01:00
Martin Diehl
51e5dda702
documentation + consistent string formatting
2020-11-15 10:54:20 +01:00
Martin Diehl
05c1007add
documentation improvments + acceptance of lists
...
example code at respective function, no space in 'or' variable names
(sphinx cannot handle this)
2020-11-15 10:31:01 +01:00
Martin Diehl
1eb9d494c7
not specific to Orientation class
2020-11-14 19:51:15 +01:00
Martin Diehl
149fce0a7e
increase test coverage
2020-11-14 19:42:52 +01:00