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DAMASK_EICMD
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simplified 

place seems to work
This commit is contained in:
Martin Diehl 2021-03-31 07:54:23 +02:00
parent 60119c1300
commit eebb050a64
1 changed files with 35 additions and 30 deletions
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65
python/damask/_result.py
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@ -16,7 +16,6 @@ from numpy.lib import recfunctions as rfn
import damask
from . import VTK
from . import Table
from . import Orientation
from . import grid_filters
from . import mechanics
@ -1320,7 +1319,7 @@ class Result:
def read(self,labels,compress=True,strip=True):
r = {}
labels_ = [labels] if isinstance(labels,str) else labels
labels_ = set([labels] if isinstance(labels,str) else labels)
with h5py.File(self.fname,'r') as f:
for inc in util.show_progress(self.visible['increments']):
r[inc] = {'phase':{},'homogenization':{}}
@ -1328,28 +1327,26 @@ class Result:
r[inc]['phase'][ph] = {}
for me in f[os.path.join(inc,'phase',ph)].keys():
r[inc]['phase'][ph][me] = {}
for da in f[os.path.join(inc,'phase',ph,me)].keys():
if da in labels_:
r[inc]['phase'][ph][me][da] = \
f[os.path.join(inc,'phase',ph,me,da)][()]
for la in labels_.intersection(f[os.path.join(inc,'phase',ph,me)].keys()):
r[inc]['phase'][ph][me][la] = \
f[os.path.join(inc,'phase',ph,me,la)][()]
for ho in self.visible['homogenizations']:
r[inc]['homogenization'][ho] = {}
for me in f[os.path.join(inc,'homogenization',ho)].keys():
r[inc]['homogenization'][ho][me] = {}
for da in f[os.path.join(inc,'homogenization',ho,me)].keys():
if da in labels_:
r[inc]['homogenization'][ho][me][da] = \
f[os.path.join(inc,'homogenization',ho,me,da)][()]
for la in labels_.intersection(f[os.path.join(inc,'homogenization',ho,me)].keys()):
r[inc]['homogenization'][ho][me][la] = \
f[os.path.join(inc,'homogenization',ho,me,la)][()]
if strip: r = util.dict_strip(r)
if compress: r = util.dict_compress(r)
return r
def place(self,labels,compress=True,strip=True,constituents=None,fill_int=0,fill_float=0.0):
def place(self,labels,compress=True,strip=True,constituents=None,fill_value=0.0):
r = {}
labels_ = [labels] if isinstance(labels,str) else labels
labels_ = set([labels] if isinstance(labels,str) else labels)
if constituents is None:
constituents_ = range(self.N_constituents)
else:
@ -1362,32 +1359,40 @@ class Result:
with h5py.File(self.fname,'r') as f:
N_cells = self.cells.prod() if self.structured else np.shape(f['/geometry/T_c'])[0]
to_cell_ph = []
at_cell_ph = []
in_data_ph = []
for c in constituents_:
to_cell_ph.append({label: np.where(f[os.path.join(grp,'phase')][:,c][name] == str.encode(label))[0] \
at_cell_ph.append({label: np.where(f[os.path.join(grp,'phase')][:,c][name] == str.encode(label))[0] \
for label in self.visible['phases']})
in_data_ph.append({label: f[os.path.join(grp,'phase')]['entry'][at_cell_ph[c][label]][...,0] \
for label in self.visible['phases']})
to_cell_ho = {label: np.where(f[os.path.join(grp,'homogenization')][name] == str.encode(label))[0] \
for label in self.visible['homogenizations']}
for inc in util.show_progress(self.visible['increments'],len(self.visible['increments'])):
#at_cell_ho = {label: np.where(f[os.path.join(grp,'homogenization')][name] == str.encode(label))[0] \
# for label in self.visible['homogenizations']}
c = 0
for inc in util.show_progress(self.visible['increments']):
r[inc] = {'phase':{},'homogenization':{}}
for ph in self.visible['phases']:
for me in f[os.path.join(inc,'phase',ph)].keys():
r[inc]['phase'][me] = {}
for da in f[os.path.join(inc,'phase',ph,me)].keys():
if da in labels_:
data = f[os.path.join(inc,'phase',ph,me,da)][()]
if me not in r[inc]['phase'].keys(): r[inc]['phase'][me] = {}
for la in labels_.intersection(f[os.path.join(inc,'phase',ph,me)].keys()):
data = ma.array(f[os.path.join(inc,'phase',ph,me,la)])
unit = f[os.path.join(inc,'phase',ph,me,la)].attrs['unit']
description = f[os.path.join(inc,'phase',ph,me,la)].attrs['description']
if not h5py3:
description = description.decode()
unit = unit.decode()
if la not in r[inc]['phase'][me].keys():
dt = np.dtype(data.dtype,metadata={'description':description, 'unit':unit})
container = np.empty((N_cells,)+data.shape[1:],dtype=dt)
r[inc]['phase'][me][la] = ma.array(container,fill_value=fill_value,mask=True)
r[inc]['phase'][me][la][at_cell_ph[c][ph]] = data[in_data_ph[c][ph]]
unit = f[os.path.join(inc,'phase',ph,me,da)].attrs['unit']
description = f[os.path.join(inc,'phase',ph,me,da)].attrs['description']
if not h5py3:
description = description.decode()
unit = unit.decode()
if da not in r[inc]['phase'][me].keys():
dt = np.dtype(data.dtype,metadata={'description':description,
'unit':unit})
r[inc]['phase'][me][da] = ma.empty((N_cells,)+data.shape[1:],dtype=dt)
if strip: r = util.dict_strip(r)
if compress: r = util.dict_compress(r)
return r