Commit Graph

1229 Commits

Author SHA1 Message Date
Martin Diehl 811a02eb51 better readable 2018-11-04 09:19:24 +01:00
Martin Diehl c863419a0b cleaning 2018-11-04 09:00:35 +01:00
Martin Diehl 7a37ea25f3 cleaning 2018-11-04 08:49:40 +01:00
Martin Diehl 78f4d4c5ee simplified 2018-11-04 08:22:59 +01:00
Martin Diehl ff2b693f1e simplified 2018-11-04 07:56:27 +01:00
Martin Diehl 572576cf88 these functions have no side effects 2018-11-04 07:33:57 +01:00
Martin Diehl 4dc3761fea setting of (random) cluster orientations remove
can be easily done in a pre processing step
2018-11-04 07:29:39 +01:00
Martin Diehl f471911e01 fixed array out of bounds during initialization
happened for inactive homogenization
2018-11-04 07:27:25 +01:00
Martin Diehl 3c11905f63 cleaning 2018-11-03 23:43:25 +01:00
Martin Diehl 8127d85be1 simplifying 2018-11-03 23:13:20 +01:00
Martin Diehl 078729bfa3 using dependent state 2018-11-03 22:43:52 +01:00
Martin Diehl 70998f7f9a cleaning 2018-11-03 22:00:40 +01:00
Martin Diehl 69079b6558 was not used at all 2018-11-03 21:16:36 +01:00
Martin Diehl 0aa21e507a functions only used within updatestate 2018-11-03 21:11:43 +01:00
Martin Diehl c16fdec749 misplaced debug statement
debugging the individual constituents should be done by the constitutive
laws
2018-11-03 21:00:54 +01:00
Martin Diehl 85a2f19b18 wrong averaging 2018-11-03 20:03:23 +01:00
Martin Diehl 0447ea9d74 starting to introduce state pointers 2018-11-03 20:00:02 +01:00
Martin Diehl fdbc20b739 cleaned and unified 2018-11-03 19:29:00 +01:00
Martin Diehl 08c692bfc1 passing in instance simplifies things a lot 2018-11-03 16:40:17 +01:00
Martin Diehl a0c3a65b39 Noutput not needed anymore 2018-11-03 15:41:54 +01:00
Martin Diehl a678e9b94f bugfixes
flaws introduced in 42-xx branch and detected by new test
- outputsize was wrong
- nconstituents is product along the 3 directions, not the sum
2018-11-03 15:13:11 +01:00
Martin Diehl c5b98e544a Merge remote-tracking branch 'origin/development' into 42-new-coding-style-for-homogenization 2018-11-03 11:30:12 +01:00
Martin Diehl f88b78195a not need to repeat shape definition 2018-10-26 10:20:45 +02:00
Martin Diehl c413df7ed2 a little cleaning 2018-10-18 22:54:33 +02:00
Martin Diehl 49c7a6c524 sorting 2018-10-18 22:20:26 +02:00
Martin Diehl f71e067f5e using functionality from lattice 2018-10-18 21:41:17 +02:00
Martin Diehl d7fa3a9791 just sorting 2018-10-18 21:34:26 +02:00
Martin Diehl 59399f2cd2 sanity checks 2018-10-18 19:06:21 +02:00
Martin Diehl 33d816a5d0 polishing 2018-10-17 23:56:57 +02:00
Martin Diehl 121d146a35 using more central functions 2018-10-17 23:20:39 +02:00
Martin Diehl 4320061554 using central functionality 2018-10-17 23:13:47 +02:00
Martin Diehl 8017fccbc3 adjusting to phenopowerlaw 2018-10-17 22:18:33 +02:00
Martin Diehl 2fd348f251 just re-ordering 2018-10-17 21:47:50 +02:00
Martin Diehl 6b4b5b511f don't let dipole formation be undefined 2018-10-17 21:41:21 +02:00
Martin Diehl b7bc5afa90 Merge remote-tracking branch 'origin/development' into 20-NewStyleDislotwin 2018-10-17 20:10:49 +02:00
Martin Diehl 7ac96bd630 polishing 2018-10-17 00:01:21 +02:00
Martin Diehl d92ab04892 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-10-15 22:38:55 +02:00
Martin Diehl be8d7e19fe missing use statement caused compilation error 2018-10-15 22:38:34 +02:00
Martin Diehl 2ca7807438 cleavage systems avaialable as function 2018-10-15 22:29:23 +02:00
Martin Diehl ad1a64c338 rename was missing 2018-10-15 06:01:38 +02:00
Martin Diehl 57ca93c3c9 added missing allocation 2018-10-15 05:28:52 +02:00
Martin Diehl e5ec5ed54c check prerequisites as early as possible 2018-10-15 05:03:53 +02:00
Martin Diehl 767ca0edd4 avoid code repetition 2018-10-14 20:16:30 +02:00
Martin Diehl a311cc7673 Merge remote-tracking branch 'origin/development' into 19-NewStylePhenopowerlaw 2018-10-14 15:53:50 +02:00
Martin Diehl 6599aa487c kinetics_slip does not seem to be the problem 2018-10-14 15:53:24 +02:00
Martin Diehl 1839228add sorting
new mappings. Needs more work (don't forget https://xkcd.com/927)
2018-10-14 12:27:42 +02:00
Martin Diehl 943fa764c0 not needed 2018-10-14 11:15:07 +02:00
Martin Diehl 4ac12d1dc5 removed hybridIA 2018-10-14 10:11:26 +02:00
Martin Diehl 4c780226d1 polishing 2018-10-14 09:27:34 +02:00
Martin Diehl 17c21dfc92 mesh_element should not be used anymore 2018-10-13 18:21:13 +02:00
Martin Diehl 06d71d9d2c Merge remote-tracking branch 'origin/development' into 42-new-coding-style-for-homogenization 2018-10-13 17:27:25 +02:00
Martin Diehl 513faa2218 investigating the reason for the poor performance 2018-10-13 11:29:07 +02:00
Franz Roters d9fbf2ab50 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-10-13 10:52:03 +02:00
Franz Roters 905b5a33eb added link for Marc2018 2018-10-13 10:50:20 +02:00
Franz Roters 1a458108bc added support for Marc2018 2018-10-13 10:26:42 +02:00
Martin Diehl fa9cbe13c9 do concurrent not safe here 2018-10-13 08:35:36 +02:00
Martin Diehl 6207781eb6 [skip ci] [skip sc] streamlining 2018-10-12 17:24:46 +02:00
Franz Roters d1561e867a Merge branch '44-column-major-access-to-interaction-matrices' into 'development'
Resolve "column-major access to interaction matrices"

Closes #44

See merge request damask/DAMASK!43
2018-10-12 13:03:22 +02:00
Martin Diehl 5597ee338e simplifying
- whole type is private, no need to make the components private
- target not needed when using associate
2018-10-12 08:26:24 +02:00
Martin Diehl 854d3ab774 clearer logic for controlling dipole formation 2018-10-12 08:23:56 +02:00
Vitesh Shah 38f9807c42 cleaning up the codes 2018-10-11 18:00:01 +02:00
Martin Diehl 51a3308a3d bugfix: same tau was used for all systems 2018-10-11 17:28:00 +02:00
Vitesh Shah cd2fb9f417 adding prefixes to writing of datasets under groups 2018-10-10 19:08:44 +02:00
Vitesh Shah fa13e71493 removed typo(&) 2018-10-10 18:09:10 +02:00
Vitesh Shah 78db0ecb3c reading and writing of subroutines of datasets of different ranks 2018-10-10 17:54:55 +02:00
Martin Diehl 7217cdac1b Merge branch '29-rename-mesh_element-array' into development 2018-10-10 15:55:23 +02:00
Martin Diehl ef1899cfd0 improved error reporting
- tell user specifically whether number of systems is too high or too
low
- c/a sanity check can be done centrally
2018-10-10 07:42:07 +02:00
Philip Eisenlohr f0b9c0caf7 polishing and encapsulating of Abaqus-specific local variables 2018-10-09 17:57:10 -04:00
Franz Roters 1d0584dcdf typo in message 2018-10-09 16:44:47 +02:00
Martin Diehl d81c9f744e avoid errors by consistently closing objects
general bugfixes, works now
2018-10-09 16:17:21 +02:00
Martin Diehl 2064ed80fd more flexible file open routine 2018-10-09 15:15:08 +02:00
Martin Diehl 8626ba1ce6 adjusted variable names and added comments 2018-10-09 14:46:57 +02:00
Martin Diehl 48403c37b7 initializing and closing the HDF5 library 2018-10-09 14:13:51 +02:00
Martin Diehl e7e0cf7118 preprocessor statements are case sensitive..
... and the PETSc variable is PETSc, not PETSC
2018-10-09 13:57:29 +02:00
Martin Diehl e3943d282a Merge branch 'development' into 47-save-restart-information-in-hdf5 2018-10-09 13:51:58 +02:00
Vitesh Shah 09ba95b029 non-executable 2018-10-09 10:58:45 +02:00
Vitesh Shah 70c746a8f1 Interfacing for subroutines to identify real and integer data 2018-10-09 10:57:06 +02:00
Martin Diehl e71ec2057e hotfix
does not seem to cause trouble here, but better be safe
2018-10-09 08:37:03 +02:00
Martin Diehl 4da3923440 more straight-forward definition of array shape 2018-10-08 23:54:45 +02:00
Martin Diehl 05aae4f7eb removed forgotten debug statement 2018-10-08 23:34:05 +02:00
Martin Diehl 50f0362aa1 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-10-08 23:33:31 +02:00
Martin Diehl 6064daceda do error check earlier
array out of bounds happened already before the check
2018-10-08 23:32:46 +02:00
Martin Diehl b51c3b5a07 handling files without LF at last line correctly 2018-10-08 23:27:06 +02:00
Philip Eisenlohr 225a48021d foramtting of random_seed output to align with rest 2018-10-08 17:01:56 -04:00
Martin Diehl 78b5fa466d fixed hick-up in lattice definitions 2018-10-08 19:32:18 +02:00
Martin Diehl 71d80cc203 sanity check too strong
still makes sense to have, but some tests need to be updated before
setting it active again
2018-10-08 13:27:15 +02:00
Martin Diehl 2a79f7ea61 taking care of c/a for hex and bct 2018-10-08 13:25:40 +02:00
Martin Diehl 5efcad952a avoid type conversion
more systematic checking of correct input parameters
2018-10-08 08:28:56 +02:00
Martin Diehl 302cf9b6c2 bugfix, now inline with code from initializeStructure 2018-10-07 22:16:18 +02:00
Martin Diehl facb1c2407 unified error checking 2018-10-07 20:03:45 +02:00
Martin Diehl 0e17b17b90 using full precision 2018-10-07 18:40:02 +02:00
Martin Diehl 34e0aca564 using full precision 2018-10-07 18:18:24 +02:00
Martin Diehl a53488d666 calculation of slip/twin/trans/damage-coordinate system was wrong 2018-10-07 15:44:13 +02:00
Martin Diehl 032c35a499 WIP: Calculation of elasticity matrices for twin and trans 2018-10-06 10:42:25 +02:00
Martin Diehl 3a2f86df1c non-schmid is always bcc 2018-10-05 23:04:06 +02:00
Martin Diehl 81a77b508a check for array size was off by 1 2018-10-05 22:46:53 +02:00
Martin Diehl 3a39c2d68c [skip ci] strings will be converted to lowercase 2018-10-05 17:54:24 +02:00
Martin Diehl 0cddf36106 typo, using value of p_slip for q 2018-10-05 17:47:46 +02:00
Martin Diehl 2a51e528bd Merge branch 'development' into 44-column-major-access-to-interaction-matrices 2018-10-05 11:11:20 +02:00
Martin Diehl 40cf7f134d Merge branch '44-column-major-access-to-interaction-matrices' of magit1.mpie.de:damask/DAMASK into 44-column-major-access-to-interaction-matrices 2018-10-05 11:08:29 +02:00
Martin Diehl aa34b83978 avoid array out of bounds
allows to handle un- or partly defined non schmid coefficients
2018-10-05 10:36:44 +02:00
Martin Diehl a560fff2ac [skip ci] [skip sc] generic interfaces for HDF5 operations
most existing HDF5 functions are only designed for writing output files
and more general functionality is needed for storing the restart data
2018-10-05 09:03:20 +02:00
Martin Diehl 47a748831f Cannot write out resolved stress including non schmid
Would need to write out tau_pos and tau_neg separately, so limit to
resolved stress in the sense of Schmid
2018-10-05 07:26:13 +02:00
Martin Diehl 6ccbc5e4e6 characteristing shear is defined per system 2018-10-05 07:20:51 +02:00
Martin Diehl e74a852ef7 new style is noticable slower
runtime (polycrystal example) increased from 70s to 90s.
Need to figure out how to write readable AND fast code
2018-10-05 06:38:20 +02:00
Martin Diehl 3a00fcde16 WIP: characteristic shear calculated in lattice 2018-10-05 05:09:31 +02:00
Martin Diehl fda2676365 calculate only if required 2018-10-05 04:54:47 +02:00
Martin Diehl 79b0efc678 also using nonSchmid matrix from lattice 2018-10-04 21:20:42 +02:00
Martin Diehl 35956ce0c8 needs to be multiplikative 2018-10-04 21:06:57 +02:00
Vitesh Shah a6ebdfc1ff Reading and writing not very efficient method 2018-10-04 17:00:24 +02:00
Martin Diehl edb94b8bc9 using the same kinetics for slip everywhere 2018-10-04 16:12:14 +02:00
Martin Diehl 12d053d123 strange parameter caused simulation not to start if not defined
probably a leftover. now only bothers you if twin systems are defined
2018-10-04 14:54:00 +02:00
Martin Diehl f1750b4eef avoiding use of unitialized arrays 2018-10-04 14:51:32 +02:00
Martin Diehl cd7f285686 prevent use of unallocated array
interaction matrices are used even if no slip/twin systems defined
2018-10-04 07:17:00 +02:00
Martin Diehl dc289a278b clearer code
homogenization is defined per element, not per IP
hence, use material_homogenizationAt instead of deprecated
material_homog which pretends a dependency on the integration point
2018-10-04 06:48:33 +02:00
Martin Diehl df473302f4 consistent (and better understandable) names 2018-10-04 06:03:48 +02:00
Martin Diehl f494803c76 fixed tangent calculation 2018-10-03 16:40:40 +02:00
Martin Diehl ec77d4450b checking for required things 2018-10-03 09:17:06 +02:00
Martin Diehl db645efda7 function to calculate nonSchmid matrix 2018-10-03 08:49:23 +02:00
Martin Diehl 103b46ecbb don't repeate code over different plastic_xxx modules 2018-10-03 07:58:02 +02:00
Martin Diehl 89e03be699 also building interactions for slip-twin and twin-slip 2018-10-03 07:51:11 +02:00
Martin Diehl 0cac6ce0d2 allocating to wrong size 2018-10-03 07:36:57 +02:00
Martin Diehl ba383336f5 only one projection matrix required for all (non)schmid projections
following the example from plastic_nonlocal
2018-10-03 07:23:18 +02:00
Martin Diehl d718521890 polishing 2018-10-03 07:13:30 +02:00
Martin Diehl 67c55965e9 segmentation fault, tried LHS with scalar
Nxx per system is stored in LATTICE_yyy_NxxxSYSTEM
Using CAPITALS for parameters improves readbility
2018-10-03 06:45:42 +02:00
Martin Diehl 97d2c2b353 mesh_element(1) has a size of 4
fixed sigsegv
2018-10-02 22:54:44 +02:00
Martin Diehl 740325165d Merge branch 'development' into 20-NewStyleDislotwin 2018-10-02 20:37:11 +02:00
Martin Diehl 0047e6c14c correct calculation of dGdot_dTau
needs to take drag coefficient into account for the derivative
2018-10-02 18:09:57 +02:00
Martin Diehl 9cc3a77e01 mean velocity of dislocation corrected for higher temperatures
- v_wait: obstacle spacing over waiting time (effective velocity)
- v_run:  'true' velocity of a dislocation moving between obstacles
for higher temperatures v_run becomes important and bounds the velocity
2018-10-02 15:56:18 +02:00
Martin Diehl 5d1e648d17 drag coefficient B introduced and read in 2018-10-02 15:25:40 +02:00
Martin Diehl 384a785805 more sevice functions use
still trying
2018-10-01 23:02:31 +02:00
Martin Diehl ff2614b757 using 'service functions' from lattice
get rid of many global array on the long run
2018-10-01 22:48:14 +02:00
Martin Diehl a943940760 Merge branch 'development' into 44-column-major-access-to-interaction-matrices 2018-10-01 22:32:38 +02:00
Martin Diehl 98296a978e Merge branch 'development' into 29-rename-mesh_element-array 2018-10-01 22:29:31 +02:00
Martin Diehl e7b8adadd0 passing in instance and of is much easier
also using always the full Mandel stress tensor to avoid repeated
conversion
2018-10-01 22:14:54 +02:00
Martin Diehl ddfbe19f02 Merge branch 'development' into 20-NewStyleDislotwin 2018-10-01 21:16:11 +02:00
Martin Diehl 27bde05529 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' into 'development'
Resolve "Introduce Rudimentary PETSc based FEM solver"

Closes #38

See merge request damask/DAMASK!41
2018-10-01 21:10:03 +02:00
Franz Roters d5cf7d2144 Merge branch '19-NewStylePhenopowerlaw' into 'development'
Resolve "New coding style for phenopowerlaw"

See merge request damask/DAMASK!39
2018-10-01 16:08:05 +02:00
Martin Diehl 49a4202e26 not needed here 2018-09-29 10:31:45 +02:00
Martin Diehl 14509876d4 error == 0 is normal termination 2018-09-29 09:57:53 +02:00
Martin Diehl 637544509e rewind needed
the file is read twice from beginning to end
2018-09-28 10:06:21 +02:00
Vitesh Shah 8619b49e20 made it nonexecutable 2018-09-28 08:47:00 +02:00
Vitesh Shah 8bd0cb3b25 Made it non executable 2018-09-28 08:45:52 +02:00
Vitesh Shah 6efde5f4ce Combined the dataset creation and writing dataset in single subroutine. Created group for looped writing. 2018-09-28 08:41:29 +02:00
Martin Diehl b141252f1f doing the same things in the same way in both solvers 2018-09-28 08:06:22 +02:00
Martin Diehl d1f614991e merging good style mutually FEM <-> Spectral 2018-09-28 07:49:52 +02:00
Martin Diehl 6780217193 adopted from DAMASK_spectral 2018-09-28 07:25:32 +02:00
Martin Diehl e8f687a99c typo, Abaqus/Marc did not compile 2018-09-27 20:18:37 +02:00
Martin Diehl 822bc4dbbf Merge branch 'development' into 29-rename-mesh_element-array 2018-09-27 20:12:09 +02:00
Martin Diehl 4c057ba529 both solvers can share quit 2018-09-27 20:09:59 +02:00
Chuanlai Liu b391ad304d tensor input/output is of the form 11,12,13, 21,22,23, 31,32,33. Thus row index i is slow, while column index j is fast 2018-09-27 11:53:45 +02:00
Martin Diehl 6509775d41 cleaning
avoiding compiler warnings and confusion of the user
2018-09-27 08:23:30 +02:00
Vitesh Shah 5b52ac91e5 Revert "made it non executable"
This reverts commit 05c784aefc.
2018-09-26 09:28:47 +02:00
Martin Diehl c3380aa9f3 using wrong (uninitialized) stress 2018-09-26 09:22:12 +02:00
Vitesh Shah 2edf8f7f53 Need to commit this before reverting the changes in other files 2018-09-26 09:21:53 +02:00
Vitesh Shah 3408282755 windows and linux editor incompatibility 2018-09-25 16:49:25 +02:00
Vitesh Shah 05c784aefc made it non executable 2018-09-25 16:48:02 +02:00
Vitesh Shah b71896d4b6 writing of multidimensional dataset into hdf5 does not appear as multiple pages in hdfviewer 2018-09-25 16:42:43 +02:00
Martin Diehl ceb385ef39 calcMode not needed for spectral and FEM 2018-09-23 21:31:30 +02:00
Martin Diehl c42eb87a33 using arrays with new names 2018-09-23 20:53:35 +02:00
Martin Diehl 72b87b0a9b better name 2018-09-23 19:58:43 +02:00
Martin Diehl f701910c71 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-23 19:32:19 +02:00
Martin Diehl ebef12e446 syntax errors in declaration 2018-09-23 19:04:17 +02:00
Martin Diehl 67483487ea more descriptive names 2018-09-23 18:50:54 +02:00
Martin Diehl 854d99250c mesh_element(1,:) only used for debug output
set to -1 at the moment to indicate that it is not used.
Re-implementation should be done for MSC.Marc and Abaqus only.
2018-09-23 18:42:49 +02:00
Martin Diehl 4b14cc5560 calcmode only needed for Abaqus and MSC.Marc 2018-09-23 18:06:18 +02:00
Martin Diehl cf6d388a6b consistent order of solver-specific functionality 2018-09-23 17:57:48 +02:00
Martin Diehl 5936397ae7 introducing better names
allows further simplifications as we do not store max and per elem
values any more for number of integration points and number of cell
nodes
2018-09-23 17:37:57 +02:00
Martin Diehl 2fe2c4ca45 leaner syntax with sourced allocation 2018-09-23 17:26:13 +02:00
Martin Diehl 51390b1acf Nelems /= NcpElems only in case of Abaqus/MSC.Marc 2018-09-23 17:05:01 +02:00
Martin Diehl 5814e07021 simplified 2018-09-23 16:55:03 +02:00
Martin Diehl e3f2ad34b2 not needed 2018-09-23 16:32:13 +02:00
Martin Diehl bd60018513 not needed for spectral 2018-09-23 15:57:21 +02:00
Martin Diehl c1b8854132 only needed for commercial solvers 2018-09-23 15:31:19 +02:00
Martin Diehl 4862aca340 grouping solver specific variables for better readability 2018-09-23 15:27:51 +02:00
Martin Diehl db45b7615a drop support for heterogeneous meshes
heterogeneous meshes are neither advisable nor typically used
2018-09-23 15:24:14 +02:00
Martin Diehl 519cd840bd cleaning 2018-09-23 15:19:23 +02:00
Pratheek Shanthraj 109ed4308f change in tabulation order. should now be working correctly 2018-09-23 03:14:23 +02:00
Martin Diehl 9eb318b9bf Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-22 14:54:58 +02:00
Pratheek Shanthraj d9bdf53628 quadrature weights defined twice for some reason 2018-09-22 12:55:23 +02:00
Pratheek Shanthraj ffcadc1d86 use displacements instead of coordinates 2018-09-22 12:54:45 +02:00
Pratheek Shanthraj 4a25520828 removed debug write statements 2018-09-22 12:53:33 +02:00
Pratheek Shanthraj 6c21c60c70 corrected nbasis 2018-09-22 12:53:02 +02:00
Pratheek Shanthraj becd959913 dmda not needed 2018-09-22 12:52:29 +02:00
Pratheek Shanthraj 81ced06393 order --> degree 2018-09-22 12:51:02 +02:00
Pratheek Shanthraj 22c1436af6 working with petsc 3.10 2018-09-22 12:49:56 +02:00
Pratheek Shanthraj c9a4609290 reading in BCs correctly 2018-09-22 12:48:57 +02:00
Martin Diehl 42bc1b468a cleaning+adopting to petsc-3.10 2018-09-22 11:19:08 +02:00
Martin Diehl a95e2b8083 Merge branch 'PETSc3.10' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-22 10:36:31 +02:00
Martin Diehl f590851a78 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-22 10:33:20 +02:00
Martin Diehl 80914470cc most probably pInt and PetscInt is the same 2018-09-22 10:32:26 +02:00
Jaeyong Jung 4ddb8d843c modified DMGetDefaultGlobalSection to DMGetGlobalSection 2018-09-21 14:08:44 +02:00
Jaeyong Jung 9150844c96 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-21 10:13:27 +02:00
Martin Diehl 180105d3ce external statements will not work if interfaces exist
we're currently providing a patch for PETSc with interfaces for all
functions that we use
2018-09-21 08:25:35 +02:00
Martin Diehl ff241ae4a6 only use required includes 2018-09-21 08:19:36 +02:00
Martin Diehl bd9a02bfe2 creating hdf5 file to contain restart information
first quick and dirty implementation to get started. needs polishing and
renaming
2018-09-20 19:42:58 +02:00
Jaeyong Jung abe5c1d825 Merge branch '38-introduce-rudimentary-PETSc-based-FEM-solver' of magit1.mpie.de:damask/DAMASK into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-20 09:57:30 +02:00
Martin Diehl b775d5084b more (temporarly) cleaning 2018-09-20 08:26:59 +02:00
Martin Diehl 1545a53ea9 ID do not exist at the moment 2018-09-20 08:00:39 +02:00
Martin Diehl cc262ae198 Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-20 07:29:19 +02:00
Martin Diehl 3e7b80a3ef debug only available if compiled in debug mode 2018-09-20 07:27:12 +02:00
Martin Diehl fc016bbc6e Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-09-20 07:16:03 +02:00
Martin Diehl 310ea62964 only print out the essential information 2018-09-20 06:58:31 +02:00
Martin Diehl fcff6b908a can be easily computed during post processing 2018-09-20 06:40:23 +02:00
Martin Diehl 901355d2ae don't use unnecessarily long names 2018-09-20 06:27:53 +02:00
Martin Diehl df0464c31b use (import) debug variables only when needed 2018-09-20 06:24:03 +02:00
Martin Diehl 6aa4dd842a define debug variables only if needed 2018-09-20 06:09:02 +02:00
Martin Diehl 1623a33b48 cleaning (mainly OMP FLUSh) 2018-09-19 21:46:26 +02:00
Martin Diehl 191ad9df09 not used 2018-09-19 20:40:35 +02:00
Martin Diehl 1bf1e13b46 some debug statements 2018-09-19 20:23:28 +02:00
Martin Diehl e7e959af47 using explicit interface from PETScDT 2018-09-19 20:06:35 +02:00
Martin Diehl 11d4c28d88 flushes not needed + further cleaning 2018-09-19 19:45:57 +02:00
Martin Diehl b84476e681 cleaning and debugging 2018-09-19 18:33:37 +02:00
Martin Diehl c313dc1675 only read access 2018-09-19 17:04:12 +02:00
Martin Diehl 0bf64645a1 should be done by the plasticity laws (for the moment) 2018-09-19 14:22:35 +02:00
Martin Diehl a8fb7d7ade not needed
but I'm under the impression that the compiler removes such things anyway
2018-09-19 14:21:10 +02:00
Martin Diehl 20f0bee459 fallback dPdF not needed
save a lot of memory
2018-09-19 06:19:40 +02:00
Martin Diehl 18db5f5652 not needed 2018-09-18 05:20:08 +02:00
Martin Diehl 82cdc551a5 MPI Communicator only needed for PETSc 3.10.
thx to Jaeyong for figuring this out
2018-09-18 05:17:48 +02:00
Martin Diehl 245676728d not needed 2018-09-17 23:28:00 +02:00
Jaeyong Jung 3beab556a2 runtime polar decompoistion error comes up 2018-09-17 15:41:58 +02:00
Martin Diehl c1a9d3fbf6 names in agreement with the DAMASK paper 2018-09-17 08:23:23 +02:00
Martin Diehl 4a5e55cce9 Merge branch 'development' into 20-NewStyleDislotwin 2018-09-17 07:59:46 +02:00
Martin Diehl e6fa3f3d35 correct stress in postResults 2018-09-16 22:57:50 +02:00
Martin Diehl cea2fba063 don't repeat code that can be handled centrally 2018-09-16 22:38:57 +02:00
Martin Diehl 9570fb894a correct names and no superflous conversions anymore 2018-09-16 22:31:55 +02:00
Martin Diehl 5f06a35900 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-09-16 22:03:05 +02:00
Martin Diehl b54742cfa7 [skip sc] [skip ci] PETSc 3.10 is out 2018-09-15 20:09:27 +02:00
Martin Diehl 075d2e51b2 debugging, still crashing 2018-09-15 16:19:41 +02:00
Martin Diehl 3b1817a954 cleaning, only having mech at the moment 2018-09-15 15:14:48 +02:00
Martin Diehl 934ca56811 clean exit if required files not found 2018-09-15 14:54:56 +02:00
Martin Diehl a92b945e3f does not crash anymore
xx is nc, the number of components
needs to be 3 in the current case
2018-09-15 11:40:07 +02:00
Martin Diehl 45dc59b1d8 kinetics also for trans 2018-09-15 10:43:05 +02:00
Martin Diehl 5e33900664 Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver 2018-09-15 08:38:30 +02:00
Martin Diehl ed570f0fe8 use of kinetics avoids different calculation of shearrates 2018-09-15 08:24:12 +02:00
Martin Diehl 3526c0a757 index missing, test failed 2018-09-15 07:49:14 +02:00
Martin Diehl acc3294909 more verbose initialization 2018-09-15 06:39:02 +02:00
Martin Diehl 25a38ad438 initialization broken
- need to consider case of no twin/slip active
- state0 needs to be initialized
2018-09-15 05:45:10 +02:00
Martin Diehl a3750738c0 type mismatch for MSC.Marc 2018-09-14 12:20:37 +02:00
Martin Diehl 9c5ca0e542 use of kinetics simplifies code 2018-09-14 12:17:35 +02:00
Martin Diehl bd0b561772 better readable 2018-09-14 11:56:36 +02:00
Martin Diehl 9f16cefd9f renaming in accordance with the DAMASK paper 2018-09-14 11:17:14 +02:00
Martin Diehl af32b3d85b reordering for easier overview 2018-09-14 10:51:44 +02:00
Martin Diehl 3dd47eade9 just renaming, better readable... 2018-09-14 10:18:44 +02:00
Martin Diehl 07b0ddf711 polishing 2018-09-14 10:08:36 +02:00
Martin Diehl 80a2062c4b Merge remote-tracking branch 'origin/20-NewStyleDislotwin' into 20-NewStyleDislotwin 2018-09-14 10:00:11 +02:00
Martin Diehl 18858301d5 using consistently i as first running index and j as second 2018-09-14 09:59:04 +02:00
Martin Diehl 55511782e8 incomplete transition/renaming
caused segmentation fault
2018-09-14 08:19:39 +02:00
Martin Diehl f98243e4ac Merge branch 'development' into 43-wrong-stress-in-dotstate-and-deltastate 2018-09-14 05:39:15 +02:00
Martin Diehl 989393e6e8 should not differ from development 2018-09-14 05:37:17 +02:00
Martin Diehl e2a66f6ddb should not differ from development 2018-09-14 05:33:39 +02:00
Martin Diehl b165e48d9f non-Schmid contribution were ignored in test
reverted, just to ensure that the results have not changed: Never
polishing and change physics at the same time
2018-09-14 05:21:05 +02:00
Martin Diehl cc20b044a6 forgot to allocate array now used internally only 2018-09-13 09:27:54 +02:00
Martin Diehl ad3994c484 allocate all dependentStates/microstructures 2018-09-13 06:48:06 +02:00
Martin Diehl e7f7fa74b7 don't do calculation of dependentStates/microstructure manually 2018-09-13 06:20:58 +02:00
Martin Diehl 8baa4f9c81 need to avoid array access out of bounds 2018-09-13 06:12:32 +02:00
Martin Diehl ae8efe2755 Merge branch 'development' into 44-column-major-access-to-interaction-matrices 2018-09-13 05:55:59 +02:00
Martin Diehl 8ecb019566 real must be pReal for MSC.Marc 2018-09-13 05:51:58 +02:00
Martin Diehl 4266872965 array out of bounds was possible for Ntwin =0
in postResults(c+1:c+prm%totalNtwin) c+1 will be out of bounds if
c is already size(postResults)
2018-09-13 05:41:44 +02:00
Martin Diehl 66edad1cf8 avoid code doubling
shear rates needed multiple times. For now, just introduced but not
used. Will become active once the test passes again
2018-09-12 22:07:59 +02:00
Martin Diehl 3068caa9a3 [skip sc] resolved stress not needed
using kinetics_xxx as in disloUCLA
compiles on gfortran but pre-receive hook with intel compiler (MSC.Marc)
fails
2018-09-12 21:05:40 +02:00
Martin Diehl ac3625afba array access out of bounds 2018-09-12 20:42:57 +02:00
Martin Diehl 4e68d049a8 WIP: calculating rotated stiffness matrices for transformation 2018-09-12 20:37:55 +02:00
Martin Diehl b95174a8b7 reducing global variables 2018-09-12 16:16:31 +02:00
Martin Diehl 192bb6453d cleaning 2018-09-12 15:57:54 +02:00
Martin Diehl b753a86d13 cleaning 2018-09-12 15:27:47 +02:00
Martin Diehl 0a621ece8b WIP: polishing and implementing remaining functions 2018-09-12 14:29:22 +02:00
Martin Diehl f1f8922ab8 more meaningful error messages 2018-09-12 14:03:45 +02:00
Martin Diehl d7023096ad introduced kinetics, not in use yet 2018-09-12 13:25:18 +02:00
Martin Diehl edebe4d1ed vectorization error 2018-09-12 12:26:33 +02:00
Martin Diehl c9b5b3fb7b should be always set, even if no twinning is enabled
fixes NaN in dotState
2018-09-12 12:08:03 +02:00
Martin Diehl 253f318e55 preventing NaN in dotState 2018-09-12 11:47:35 +02:00
Martin Diehl 2337dde525 cleaning 2018-09-12 11:26:59 +02:00
Martin Diehl 8a406150f8 polishing 2018-09-12 10:06:04 +02:00
Martin Diehl 3352611267 cleaning 2018-09-12 09:59:09 +02:00
Martin Diehl 01196ca36b Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-09-12 09:50:24 +02:00
Martin Diehl c9208315f5 avoid repeated calculations
does not save so much here, but avoids having inconsistent calculation
(e.g. nonSchmid effects) and serves as a template for more complex
models
2018-09-12 09:23:11 +02:00
Martin Diehl ad7c099fe3 Merge branch 'development' into 20-NewStyleDislotwin 2018-09-11 17:03:05 +02:00
Martin Diehl ce6e6679d5 causes array access out of bounds, needs further checks 2018-09-11 12:20:05 +02:00
Martin Diehl 51a6f4b990 Merge branch 'development' into 20-NewStyleDislotwin 2018-09-11 02:39:53 +02:00
Martin Diehl 3d49c70dbc commenting 2018-09-08 20:15:17 +02:00
Philip Eisenlohr 9be2c084e4 Merge branch '39-simplify-obscure-numerics-integration-mode' into 'development'
Resolve "simplify obscure numerics integration mode"

Closes #39

See merge request damask/DAMASK!36
2018-09-07 19:34:35 +02:00
Philip Eisenlohr 7e330f1249 Merge branch '37-include-hdf5-routines' into 'development'
Resolve "Include HDF5 routines"

Closes #37

See merge request damask/DAMASK!37
2018-09-07 19:18:07 +02:00
Satyapriya Gupta a16454f1f9 fixed missing propagation of dependent state variables 2018-09-06 16:48:28 -04:00
Martin Diehl e70efd2608 inform about debug versions indenpendently of the solver 2018-09-06 16:49:39 +02:00
Martin Diehl 8324962123 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-09-06 16:26:46 +02:00
Martin Diehl 8b3d30fdd4 don't know what happend to the copyright note 2018-09-05 23:47:01 +02:00
Martin Diehl 0f084a9844 cleaning output 2018-09-05 23:39:54 +02:00
Martin Diehl 918de24f83 using microstructure instead of 'dependent state' 2018-09-05 23:00:46 +02:00
Martin Diehl 1f9d268e29 renaming 2018-09-05 16:15:57 +02:00
Martin Diehl 97977f4940 all parameters should be stored in the constitutive laws
no need to know the 'phase number' anymore
2018-09-05 15:54:19 +02:00
Martin Diehl 038508aa11 'dependent states' do not need to be accessible globally 2018-09-05 11:07:00 +02:00
Martin Diehl 4fbe5811a3 too much whitespace 2018-09-01 11:08:38 +02:00
Martin Diehl e9f738fade cleaning + renaming 2018-09-01 10:58:50 +02:00
Martin Diehl cf65aae92a correct names 2018-09-01 06:49:03 +02:00
Martin Diehl 0b94b8085d still just polishing 2018-08-31 18:17:35 +02:00
Philip Eisenlohr 6a64637ac3 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-31 11:23:25 -04:00
Philip Eisenlohr 3e81110830 tell user whether DEBUG version or not 2018-08-31 11:22:59 -04:00
Martin Diehl 34d1c011c7 long name does not help here 2018-08-31 16:38:17 +02:00
Martin Diehl ea1fd621aa more cleaning 2018-08-31 16:36:19 +02:00
Martin Diehl 7a67922c5f general polishing 2018-08-31 16:08:01 +02:00
Martin Diehl 912926e604 more improvements 2018-08-31 15:07:22 +02:00
Martin Diehl c0e7050867 more loops simplified 2018-08-31 14:54:33 +02:00
Martin Diehl 60e60e211c also simplifying twin loops 2018-08-31 14:33:42 +02:00
Martin Diehl dc91016729 simpler loop structures for better readability 2018-08-31 13:38:07 +02:00
Martin Diehl 42745c66f0 nested loops do not improve readability 2018-08-31 13:32:24 +02:00
Martin Diehl ba65044ff5 looping over systems simplifies loop structure 2018-08-31 13:19:28 +02:00
Martin Diehl 3431086fdb storing data per slip system simplifies calculation 2018-08-31 13:14:16 +02:00
Martin Diehl c9bb051261 fill local Schmid Matrices 2018-08-31 11:52:43 +02:00
Martin Diehl 54fe0afb16 indentation wrong 2018-08-31 11:42:54 +02:00
Martin Diehl fc4253ed57 conversion from 3x3 to 6 of stress in constitutive will be remove later 2018-08-31 11:37:14 +02:00
Martin Diehl 3b88096cd7 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-31 11:09:52 +02:00
Martin Diehl 5330fb31ad more verbose error message 2018-08-31 10:19:37 +02:00
Martin Diehl f028e05298 guessing was not correctly set 2018-08-31 10:14:33 +02:00
Martin Diehl 3cb279b083 one more loop not needed 2018-08-31 10:03:15 +02:00
Martin Diehl 017563e061 one more loop not needed 2018-08-31 09:14:16 +02:00
Martin Diehl c0ac05aa88 no need to use two loops 2018-08-31 09:12:50 +02:00
Martin Diehl 732022d4f0 functions from IO does not add any value here
only prevents the automated selection of a new unit
2018-08-31 08:58:13 +02:00
Martin Diehl d18d74ae31 mechanics solver type is set only once
as all mech routines have the same interface, this leaner syntax can be
used
2018-08-31 08:20:23 +02:00
Martin Diehl 0b049fc843 Merge branch 'development' into 42-new-coding-style-for-homogenization 2018-08-31 06:36:12 +02:00
Martin Diehl 26d18257d2 requested output is stored in prm%outputID 2018-08-31 06:35:30 +02:00
Martin Diehl 91a3b4ed69 almost done 2018-08-31 01:24:28 +02:00
Martin Diehl 6b45afa72f using parameters from config.f90 2018-08-30 17:51:31 +02:00
Martin Diehl 555ca8e5f1 debug statements not needed anymore 2018-08-30 17:21:22 +02:00
Martin Diehl 62413e8187 now compiles again 2018-08-30 17:18:56 +02:00
Martin Diehl 5f97ae9080 not used at the moment 2018-08-30 16:39:18 +02:00
Martin Diehl cbecb71000 [skip sc] using explicit interface helps to get correct type
still some issues with different ranks and datatypes
2018-08-30 13:10:18 +02:00
Martin Diehl b930c68887 PETSc 3.9 style (no SIGSEGVs anymore) 2018-08-30 12:38:44 +02:00
Martin Diehl 8b6bef159e a little bit more verbose 2018-08-30 12:38:29 +02:00
Martin Diehl 3254ae79a5 collecting questions to Pratheek 2018-08-30 12:37:47 +02:00
Martin Diehl d180af494e adopted to new PETSc fortran interface 2018-08-30 11:55:13 +02:00
Martin Diehl 1f9a614388 no need to have long prefixes for local variables and functions 2018-08-30 10:50:52 +02:00
Martin Diehl 88d776cad6 consistent renames 2018-08-30 10:46:30 +02:00
Martin Diehl 29e55d20fb message better to understand and giving error instead of SIGSEGV 2018-08-30 09:42:45 +02:00
Martin Diehl b96e01c128 Merge branch 'development' into lattice-builds-interaction 2018-08-30 05:41:40 +02:00
Martin Diehl 105c4077ad Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-08-30 00:58:54 +02:00
Martin Diehl b163a8aaa0 Non-schmid activated again
internally, no need for long name plastic_phenopowerlaw_postResults
2018-08-30 00:57:15 +02:00
Martin Diehl bcff95ddf8 using new values for initialization 2018-08-29 13:52:26 +02:00
Martin Diehl 0b2dd86bbf handling cluster orientation 2018-08-29 13:36:46 +02:00
Martin Diehl b884349e7b only renaming
3333 not needed for dX_dY if X and Y are 3x3 tensors
PK2 stress is S not T according to the DAMASK paper
2018-08-29 13:16:37 +02:00
Martin Diehl 6d28883db5 starting to include non-Schmid terms (again) 2018-08-29 12:07:51 +02:00
Martin Diehl 922273f230 does not make sense to store and use the 6-vector version of the Schmid
matrix
2018-08-29 12:03:31 +02:00
Martin Diehl baeb449e07 WIP: debugging 2018-08-29 11:44:39 +02:00
Martin Diehl ef506b801e fixed two memory faults (unallocated and wrong index) 2018-08-29 09:52:22 +02:00
Martin Diehl f2acc14882 Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development 2018-08-29 08:27:15 +02:00
Martin Diehl 680c9e11d4 segmentation fault in cause of empty list 2018-08-29 08:26:28 +02:00
Martin Diehl b5e4ad247d LpAndItsTangent naming convention following DAMASK paper 2018-08-28 15:40:24 +02:00
Martin Diehl fc3ce54667 return more than one tangent 2018-08-28 15:07:39 +02:00
Martin Diehl 15e2d4a7cd Tstar is S
according to the DAMASK paper
2018-08-28 15:02:58 +02:00
Martin Diehl 4c14f988a3 rename according to paper 2018-08-28 14:58:17 +02:00