Martin Diehl
58f800cf30
introduce new structure
2020-12-20 22:19:21 +01:00
Martin Diehl
d0b267b240
there are module functions
2020-12-20 18:24:35 +01:00
Martin Diehl
0f8396c9d3
cleaning
2020-12-20 18:22:04 +01:00
Martin Diehl
d92a732dcc
mech/plastic only
2020-12-20 17:58:31 +01:00
Martin Diehl
55d14fbfa8
separating
2020-12-20 16:32:33 +01:00
Martin Diehl
93b9677ec8
not needed anymore
2020-12-20 11:24:29 +01:00
Martin Diehl
dac6540a46
crystallite should become part of constitutive_mech
2020-12-20 10:48:13 +01:00
Martin Diehl
613fa5f9b2
cleaning interface
2020-12-20 10:30:41 +01:00
Martin Diehl
9425184b52
using new functions
2020-12-20 09:31:02 +01:00
Martin Diehl
9f2c150944
separate integration for source and plastic state
2020-12-19 20:31:15 +01:00
Martin Diehl
d83f72dcb8
separate collection of plastic and source state
2020-12-19 20:14:15 +01:00
Martin Diehl
0dc388ac5c
limit multiphysics to FPI integration
2020-12-19 17:54:54 +01:00
Martin Diehl
eca28556ae
not tested
...
implement again in new structure if needed
2020-12-19 17:43:37 +01:00
Martin Diehl
8dbc3d2d47
no special (untested) cases any more
2020-12-19 17:25:57 +01:00
Martin Diehl
3884549e19
store field variables as 1D array
...
first step of simplifying layout:
1) Solver translates from ip,el tuple (FEM) or cells(1),cells(2),cells(3) triple to list.
2) DAMASK iterates over all points
3) homogenization knows mapping (point,constituent) -> (instance,member)
2020-12-16 21:56:02 +01:00
Martin Diehl
5d9c931008
code follows structure
2020-12-16 11:27:42 +01:00
Martin Diehl
d7889aff12
extra function not (yet) needed
2020-12-16 09:13:13 +01:00
Martin Diehl
710c217d8a
no extra mapping for damage
2020-12-15 19:55:55 +01:00
Martin Diehl
f8e3cfe91d
not needed (was stored as restart data)
2020-12-15 19:41:47 +01:00
Martin Diehl
f8756ad95a
simplifying
...
no extral handling for homogeneous temperature (the memory that was
saved was consumed by the extra mapping)
2020-12-15 19:05:01 +01:00
Martin Diehl
d7f035235c
do initialization later
2020-12-15 14:01:39 +01:00
Martin Diehl
872ceac855
not needed
2020-12-15 11:26:31 +01:00
Martin Diehl
afbcb82502
Merge remote-tracking branch 'origin/development' into misc-improvements
2020-12-15 10:32:59 +01:00
Martin Diehl
2dd520b4a2
P_aim should be independent from P_av
...
P_av is not defined after restart or cutback. Restart with change of
load case is probably still an issue
2020-12-15 08:06:50 +01:00
Martin Diehl
8fbadef524
print instead of write
2020-12-14 22:37:14 +01:00
Martin Diehl
104fa167bd
missing rename: constituent -> phase
...
meaningfull order
2020-12-13 19:30:34 +01:00
Martin Diehl
189597dbff
drop support for old PETSc versions
2020-12-13 08:55:07 +01:00
Martin Diehl
b6d00e2fb8
limit access to public variables to one function
...
not sure if the 'volatile' attribute is needed
2020-12-13 08:48:04 +01:00
Martin Diehl
a881e6e57a
Merge remote-tracking branch 'origin/development' into misc-improvements
2020-12-10 23:41:59 +01:00
Martin Diehl
3ad741dbeb
only used in one function
2020-12-10 00:31:58 +01:00
Martin Diehl
97ee7e6ee5
not needed anymore
2020-12-07 17:26:50 +01:00
Sharan Roongta
21faee4eaa
'0' based indexing
2020-12-07 13:03:18 +01:00
Martin Diehl
429b84004d
more filters
...
- shuffle: significanlty better compression
- Fletcher32: checksum to detect errors
computational overhead is very small
2020-12-06 19:57:00 +01:00
Martin Diehl
bc4361c2ae
use variable string length
...
for array, padding is needed to get same length
2020-12-06 13:32:20 +01:00
Martin Diehl
52e3fb50bc
compress.
...
Datasets are chunked along first timension. Chunk size (1MB for real) is
probably not optimal
2020-12-06 11:44:52 +01:00
Martin Diehl
000de75617
write orientation as plain array, not derived type
2020-12-06 08:36:16 +01:00
Sharan Roongta
f563313ce9
PETSc provides subroutine to read physical tags
2020-12-06 00:10:04 +01:00
Martin Diehl
78a246b44a
avoid constant reallocation, it is slow for large vtr files
2020-12-05 12:46:48 +01:00
Martin Diehl
42eb802126
not needed anymore
2020-12-05 11:29:23 +01:00
Sharan Roongta
665dd3020d
new gmsh version
2020-12-04 03:30:39 +01:00
Martin Diehl
ac0a20696c
rename: grid -> cells
2020-12-03 22:16:34 +01:00
Martin Diehl
85d161f039
missing rename: bcc -> cI
...
also, no CamelCase in disloTungsten + a few renames of variable names
for more consistency
2020-11-29 12:57:51 +01:00
Martin Diehl
c712332e87
using consistent names for Bravais lattice in Fortran and Python
2020-11-28 22:38:12 +01:00
Martin Diehl
b7ae2c72f5
allow to parse extra options to PETSc in case of debugging
2020-11-28 11:47:20 +01:00
Martin Diehl
80c8c9e51e
fixing use for new Intel Fortran
...
visibility of use associated entities can now be limited
2020-11-28 07:23:55 +01:00
Martin Diehl
5bed0787ed
replace log scaling with geometric regression scaling
...
more flexibility in time discretization via parameter 'r'.
Also, changed variable names to reflect names in loadcase.yaml
2020-11-25 18:56:03 +01:00
Martin Diehl
4bf802a28e
fixed documentation
2020-11-18 21:51:37 +01:00
Martin Diehl
870c0f7aca
removed aliases
...
required bump of DADF5 version
2020-11-18 14:53:11 +01:00
Sharan Roongta
2157bf50cd
mech --> mechanics
2020-11-17 22:21:35 +01:00
Franz Roters
523a0979eb
Merge branch 'mpi-single-process-read' into 'development'
...
MPI single process read of grid
See merge request damask/DAMASK!277
2020-11-17 17:00:09 +01:00
Sharan Roongta
c16ad845bc
Merge branch 'modernize-testing' into 'development'
...
Modernize testing
See merge request damask/DAMASK!280
2020-11-16 20:10:38 +01:00
Sharan Roongta
c430b571fc
Merge branch 'safe-mpi-nonblocking' into 'development'
...
check all errors, avoid intermediate wait
See merge request damask/DAMASK!282
2020-11-16 18:50:05 +01:00
Martin Diehl
cf3a28952a
fixed tests
2020-11-16 16:38:17 +01:00
Martin Diehl
0bd8a410ad
check all errors, avoid intermediate wait
2020-11-16 09:22:55 +01:00
Martin Diehl
b3955573f6
using new tests
2020-11-15 22:39:47 +01:00
Martin Diehl
c9356fd447
error checking, making readable with damask.Result
2020-11-15 15:39:54 +01:00
Martin Diehl
5a28a5b4db
correct handling of C strings
...
cleaning and improving the C code for system routines and the interface
to Fortran
Reporting PETSc version
2020-11-14 14:36:10 +01:00
Martin Diehl
e419eea507
read vtr file only by process 1
2020-11-12 14:40:25 +01:00
Martin Diehl
bb471cb923
it's a process, not a thread
2020-11-12 07:51:07 +01:00
Martin Diehl
9c75674b20
unused
2020-11-12 07:50:56 +01:00
Martin Diehl
ff2eec133f
underflow/denormal might appear for gfortran
2020-11-11 21:30:11 +01:00
Martin Diehl
3d7aceb99b
avoid underflow/division by zero
2020-11-11 20:57:17 +01:00
Martin Diehl
cd7ada0da9
use Fortran internals for error handling
2020-11-11 20:09:14 +01:00
Martin Diehl
3dd5eaf1c1
clean exit with stack trace
2020-11-11 14:06:21 +01:00
Martin Diehl
8e89452791
not needed
2020-11-11 13:59:37 +01:00
Martin Diehl
5531f892c3
z = 0 for invalid number of processes
...
e.g. using 24 processes for a 128x128x128 grid would need 21 processes
with z=6 and 1 process with z=2
2020-11-11 12:47:13 +01:00
Martin Diehl
429c226008
IO is not inherited when using ifort 19
...
this is intented, public modules should only bring their own functions
and variables into global scope
2020-11-11 12:19:39 +01:00
Martin Diehl
b46a25a7d2
C capitalization
2020-11-11 11:47:23 +01:00
Martin Diehl
53110ccf35
use (also) PETSc error trapping
2020-11-11 11:46:12 +01:00
Martin Diehl
9c87142e6d
Merge branch 'development' into hdf5-error-stop
2020-11-11 11:17:37 +01:00
Martin Diehl
018709bfcf
error stop better suited for internal errors
...
error stop gives full stack trace, which is very helpful for debugging.
2020-11-11 10:19:47 +01:00
Martin Diehl
2923f639da
not needed
...
inverse mapping is computed in python
2020-11-11 10:16:38 +01:00
Martin Diehl
8429a9d695
Merge remote-tracking branch 'origin/development' into modularize-mech
2020-11-11 07:04:23 +01:00
Martin Diehl
5926f84851
WIP: refactoring Orientation=Symmetry+Rotation, Lattice=subclass of Sym, and Crystal=Lattice+Rotation
2020-11-09 21:20:56 +01:00
Sharan Roongta
8007c47b48
Merge branch 'development' into modularize-mech
2020-11-08 15:43:30 +01:00
Martin Diehl
03a68248b5
polishing
2020-11-06 13:25:00 +01:00
Martin Diehl
bbaeeb02da
Merge remote-tracking branch 'origin/misc-improvements' into h5py3
2020-11-06 13:19:47 +01:00
Martin Diehl
10b8a04d89
no need for fixed-length string
2020-11-06 00:59:12 +01:00
Martin Diehl
9cd2c19a20
no need for fixed length
2020-11-06 00:50:27 +01:00
Martin Diehl
e649fb195f
update to use variable-length strings
2020-11-05 22:34:41 +01:00
Martin Diehl
2b6001222d
black magic
...
compiles also with Intel (complained about non-existing interface
before).
Direct pointer crashes ..
2020-11-05 17:59:05 +01:00
Sharan Roongta
25e4b63969
polishing
2020-11-05 16:49:59 +01:00
Martin Diehl
b8c97c5b7e
change string type
...
normal fortran strings are fixed-length, spacepad. h5py (at least v3.x)
creates variable-length, nullterm
2020-11-05 15:36:13 +01:00
Sharan Roongta
921acb97c2
important to note
2020-11-05 00:23:43 +01:00
Sharan Roongta
bbeb031da5
only hooke is implemented
...
one function call is enough for the moment.
Should complicate/(have switch cases) when other laws apart from hooke is implemented.
2020-11-04 13:01:13 +01:00
Sharan Roongta
79071512c8
missed out
2020-11-03 11:51:57 +01:00
Sharan Roongta
2b6e09ad81
WIP: compatible with new names
2020-11-03 00:56:40 +01:00
Sharan Roongta
7b761476e4
under mech dictionary
2020-11-03 00:48:16 +01:00
Sharan Roongta
523a44a964
move to different module
2020-11-02 21:39:33 +01:00
Sharan Roongta
9cf2a5ed19
Merge branch 'development' into consistent-naming
2020-10-31 18:02:06 +01:00
Franz Roters
98cb7be21a
Merge branch 'development' into more_crystallite_cleaning
2020-10-30 16:42:19 +01:00
Sharan Roongta
146ca100e8
take care of restart files
2020-10-30 13:36:53 +01:00
Sharan Roongta
ed1be8c21c
consistent output names
2020-10-29 13:50:12 +01:00
Sharan Roongta
4b25097a9a
Merge branch 'clean-material.yaml-parse' into development
2020-10-29 12:50:40 +01:00
Martin Diehl
568d1a020c
consistent names for counting variables
2020-10-27 21:33:30 +01:00
Martin Diehl
839be90943
consistent naming
...
Nxxxs => the number of xxx
2020-10-27 21:27:26 +01:00
Franz Roters
0c51c3d8d4
still needed during initialization
2020-10-27 12:56:49 +01:00
Martin Diehl
fd4cdf965b
modularized
2020-10-24 18:00:17 +02:00
Martin Diehl
9119254210
materialpoint => homogenization
...
especially as prefix for global data (clear name spaces)
2020-10-24 17:26:42 +02:00
Martin Diehl
e464f11412
polishing
2020-10-24 17:26:24 +02:00
Martin Diehl
d765a17f0a
use function to parse material.yaml
2020-10-24 16:30:48 +02:00
Martin Diehl
a1ab526456
avoid global variables
2020-10-24 16:01:56 +02:00
Martin Diehl
5e4815cddf
not needed as public variable
2020-10-24 14:48:07 +02:00
Martin Diehl
5f2512e4d5
prepare for more sensible separation of functionality
2020-10-24 14:24:36 +02:00
Martin Diehl
68017e49b2
consistent name
2020-10-24 12:45:21 +02:00
Sharan Roongta
3dbc07a26b
better error description
2020-10-23 18:43:52 +02:00
Franz Roters
e675cec632
improved indentation
2020-10-23 17:36:41 +02:00
Franz Roters
a6f6166fa9
is set in CPFEM (doing only single IPs in commercial FEM)
2020-10-23 16:11:33 +02:00
Franz Roters
209367df0e
save one inversion
2020-10-23 15:41:51 +02:00
Franz Roters
a4fe715319
removed unnecessary variables
2020-10-23 15:33:01 +02:00
Martin Diehl
1c13737935
better readable
2020-10-21 21:12:55 +02:00
Martin Diehl
96243a4ac8
simplifying
2020-10-21 17:46:29 +02:00
Sharan Roongta
f25f7ad01e
[skip sc] consistent naming convention
2020-10-16 16:17:06 +02:00
Sharan Roongta
3f3a88fdda
capitalization
2020-10-15 23:32:38 +02:00
Sharan Roongta
6c79093a75
[skip sc] Fdot --> dotF
2020-10-15 23:22:37 +02:00
Sharan Roongta
6455627af9
accessed by correct dict now; tests improved
2020-10-15 18:09:45 +02:00
Sharan Roongta
1c911f6213
simplified
2020-10-14 17:55:57 +02:00
Sharan Roongta
35fe935088
not used
2020-10-14 13:53:31 +02:00
Sharan Roongta
e9ecda7d2e
Merge branch 'development' into loadcase.yaml
2020-10-14 13:28:06 +02:00
Sharan Roongta
f291166a03
initialisation not needed
2020-10-14 10:53:37 +02:00
Sharan Roongta
1426a35602
loadcase in yaml
2020-10-14 10:31:34 +02:00
Martin Diehl
bac7ace413
Merge remote-tracking branch 'origin/general-N_constituents' into vtr-only
2020-10-13 17:39:19 +02:00
Martin Diehl
5267aff1a2
natural Fortran order
2020-10-12 05:29:48 +02:00
Martin Diehl
72ba4645cb
Merge remote-tracking branch 'origin/development' into general-N_constituents
2020-10-12 05:27:11 +02:00
Martin Diehl
e44a1dd2ea
Merge branch 'non-nonlocalConvergenceCheck' into 'development'
...
nonlocal convergence check not needed
See merge request damask/DAMASK!249
2020-10-10 10:04:14 +02:00
Martin Diehl
2db5c9bade
geom -> vtr (zero-based)
2020-10-09 22:19:53 +02:00
Sharan Roongta
3e4330d10a
partition, not partion
2020-10-07 22:15:13 +02:00
Martin Diehl
16e47956a6
Merge branch 'YAML-improvements' into development
2020-10-07 18:28:32 +02:00
Martin Diehl
9550b0d8a2
mandatory N_constituents
2020-10-07 17:44:54 +02:00
Martin Diehl
2a23b5eaa9
simplified
2020-10-07 09:37:48 +02:00
Martin Diehl
d474e3402b
not needed for explicit calculation of nonlocal density flow
2020-10-07 09:26:46 +02:00
Martin Diehl
28380c0985
N_constituents is a general homogenization poperty
2020-10-06 23:25:46 +02:00
Sharan Roongta
08ab4a0b88
better names
2020-10-06 19:16:56 +02:00
Martin Diehl
1681889e0b
PETSc 3.14 is out
2020-10-06 07:12:04 +02:00
Sharan Roongta
2bd4e79a37
Merge branch 'development' into YAML-improvements
2020-10-05 22:37:47 +02:00
Sharan Roongta
6dff0396b6
[skip sc] more testing
2020-10-05 19:17:21 +02:00
Sharan Roongta
46973508a2
allow multi line flow yaml
2020-10-05 18:53:05 +02:00
Martin Diehl
cdf3c8cdee
Merge remote-tracking branch 'origin/development' into no-crystallite-dPdF
2020-10-03 08:34:02 +02:00
Franz Roters
365cf9a222
Merge branch 'simplify-crystallite' into 'development'
...
Simplify crystallite
See merge request damask/DAMASK!242
2020-10-02 14:14:40 +02:00
Martin Diehl
ab34109ef8
Merge remote-tracking branch 'origin/name-change' into development
2020-10-02 12:53:57 +02:00
Sharan Roongta
42d3ac045b
Merge branch 'stress-ramp-loadcase' into development
2020-10-02 11:53:49 +02:00
Sharan Roongta
26acdaf9ec
missed out
2020-10-01 16:07:50 +02:00
Sharan Roongta
33b0181286
orientation --> O
2020-10-01 14:01:50 +02:00
Sharan Roongta
776901cb81
microstructure --> material
2020-10-01 12:43:05 +02:00
Sharan Roongta
85b96209e3
use existing error description
2020-10-01 01:51:31 +02:00
Sharan Roongta
898306f82e
sanity check for key mismatch
2020-09-30 23:33:09 +02:00
Martin Diehl
a3674d9318
Merge remote-tracking branch 'origin/YAML-improvements' into development
2020-09-30 20:55:09 +02:00
Martin Diehl
57174d0aba
do not store dPdF at the crystallite level
2020-09-30 11:23:49 +02:00
Martin Diehl
7f8613f6ad
always update dPdF (was the default anyways)
2020-09-30 10:24:24 +02:00
Martin Diehl
bd5d557fbb
untangling the spaghetti
...
subLp and subLi are local variables
2020-09-30 06:14:24 +02:00
Sharan Roongta
15ef6c8ceb
more fortran like
2020-09-30 01:50:10 +02:00
Sharan Roongta
385cda9224
remove unnecessary variables
2020-09-29 20:13:02 +02:00
Sharan Roongta
45b906906d
test before reading config files
2020-09-29 20:07:33 +02:00
Sharan Roongta
a61bf3bb26
file endings, file header can be added, take care of EOF
2020-09-29 19:55:25 +02:00
Franz Roters
63f2419e92
Merge branch 'crystallite-private-data' into 'development'
...
Crystallite private data
See merge request damask/DAMASK!241
2020-09-29 16:32:45 +02:00
Martin Diehl
d0df748fc1
cleaning
2020-09-29 13:46:12 +02:00
Martin Diehl
587d5ee445
no need for two loops
2020-09-29 13:13:53 +02:00
Martin Diehl
f1e96489cc
better readable
...
somehow on the cost of the nonlocal performance
2020-09-29 12:56:12 +02:00
Martin Diehl
c46b4d90a6
modularizing
2020-09-29 12:48:29 +02:00
Martin Diehl
3ad63cb966
don't open closed units (MPI)
2020-09-29 09:22:15 +02:00
Martin Diehl
b5eaf2cb50
sorted
2020-09-29 09:03:58 +02:00
Martin Diehl
c254472346
restrict write access
2020-09-28 19:26:46 +02:00
Martin Diehl
d805887ef7
smaller, readable functions
2020-09-28 17:56:48 +02:00
Martin Diehl
20b393ac06
Merge branch 'development' into stress-ramp-loadcase
2020-09-28 09:36:38 +02:00
Philip Eisenlohr
c982658b11
[skip ci] Avoid "error: type name is not allowed"
2020-09-27 22:42:40 +02:00
Philip Eisenlohr
7786a9892e
[skip ci] Output 'worldsize' only after it has been determined...
2020-09-27 22:28:22 +02:00
Martin Diehl
002fe04d35
test for stress ramp
2020-09-26 12:09:45 +02:00
Martin Diehl
32b81770d9
shorter
2020-09-25 21:35:47 +02:00
Martin Diehl
8396af5aec
not needed
2020-09-25 15:19:31 +02:00
Martin Diehl
421d4b8f37
forgotten renames
2020-09-25 15:12:56 +02:00
Martin Diehl
8081ed3693
Merge remote-tracking branch 'origin/development' into stress-ramp-loadcase
2020-09-25 15:05:45 +02:00
Sharan Roongta
08f5851c82
take care of empty lines in this slightly new setup
2020-09-25 10:59:03 +02:00
Martin Diehl
455e221a92
Merge branch 'variableName=ParameterName' into development
2020-09-25 10:53:01 +02:00
Sharan Roongta
21ff587e17
better logic
2020-09-25 04:52:03 +02:00
Sharan Roongta
0de54404ee
skip empty lines; yaml file optional start/stop indicator can be added
2020-09-25 04:07:40 +02:00
Philip Eisenlohr
792e5045b8
fixed grid size assignments for MPI layers
2020-09-24 19:05:10 +02:00
Martin Diehl
79d672f4a7
cleaning
2020-09-24 17:04:06 +02:00
Martin Diehl
f8816a6e0c
Merge remote-tracking branch 'origin/development' into stress-ramp-loadcase
2020-09-24 16:57:07 +02:00
Sharan Roongta
40d28456af
Merge branch 'development' into variableName=ParameterName
2020-09-24 13:13:19 +02:00
Martin Diehl
0f64954300
whitespace adjustment
2020-09-24 09:36:19 +02:00
Martin Diehl
b995f34834
Merge branch 'development' into geom-fully-out-of-place
2020-09-23 22:50:20 +02:00
Martin Diehl
fa413efcbb
microstructure -> material
2020-09-23 21:25:14 +02:00
Martin Diehl
cfeec53178
dataset is called 'material', not 'materialpoint'
...
avoid infinite loop in case it is not found
2020-09-23 21:10:39 +02:00
Sharan Roongta
50b43a7878
Merge branch 'development' into YAML-improvements
2020-09-23 16:03:15 +02:00
Sharan Roongta
cc019f9af4
[skip ci] burgers ---> Burgers
2020-09-23 02:06:03 +02:00
Sharan Roongta
c72240323e
applied to lattice variables
2020-09-23 01:50:13 +02:00
Sharan Roongta
fb908a5f56
homogenization modules made consistent
2020-09-23 01:33:19 +02:00
Sharan Roongta
13cbd1c42e
all kinematics modules made consistent
2020-09-23 01:16:12 +02:00
Sharan Roongta
190b90d3d4
all source mechanisms covered
2020-09-23 01:08:13 +02:00
Sharan Roongta
de3e13df88
improved parameter names
2020-09-23 00:55:19 +02:00
Sharan Roongta
c8dcd4b4ae
'decide' function should handle everything
...
bug fixed in case of only flow yaml
2020-09-22 23:51:47 +02:00
Martin Diehl
881167a37c
[skip ci] small whitespace adjustments
2020-09-22 19:26:39 +02:00
Sharan Roongta
0eef0cad0c
all plastic laws covered
2020-09-22 18:11:09 +02:00
Sharan Roongta
711506df37
extended to phenopower law
2020-09-22 16:04:14 +02:00
Sharan Roongta
ac54bd7eb5
extended to kinehardening
2020-09-22 15:26:34 +02:00
Sharan Roongta
8f3bb82b27
continue with parameter name change
...
Names with conflicts not changed yet
2020-09-22 15:09:16 +02:00
Sharan Roongta
87ae2447b9
variable name = parameter name
2020-09-22 14:35:05 +02:00
Martin Diehl
41fbc58c1b
standard conforming name
2020-09-22 13:09:12 +02:00
Martin Diehl
53ce4e07d2
forgotten renames in subfolders
2020-09-22 13:02:33 +02:00
Martin Diehl
f26c3ca1ea
Merge branch 'development' into Fortran-simplifications
2020-09-22 12:45:18 +02:00