Commit Graph

644 Commits

Author SHA1 Message Date
Martin Diehl 0ebb9b611d functionality to sort material id
convenient for layered materials
2020-10-31 20:46:21 +01:00
Martin Diehl cf740a279e combine constant with varying data 2020-10-31 09:56:43 +01:00
Philip Eisenlohr 46e5023f8b Merge branch 'geom-improvements' into 'development'
Geom improvements

See merge request damask/DAMASK!264
2020-10-29 23:53:33 +01:00
Martin Diehl 0e499eedf3 correct rounding/clearer logic 2020-10-29 18:35:22 +01:00
Martin Diehl 4b700d367e improved test 2020-10-29 17:59:44 +01:00
Martin Diehl 999cf53c07 tests+fixes 2020-10-29 07:42:41 +01:00
Martin Diehl 855bf124d3 faster
https://stackoverflow.com/questions/16992713
2020-10-28 16:53:16 +01:00
Sharan Roongta 21f095c9d8 Merge branch 'flexible-yaml-dump' into development 2020-10-28 16:19:17 +01:00
Martin Diehl 5f03e8cf8f 0-based material indices 2020-10-28 09:31:55 +01:00
Martin Diehl a5a127b787 new tests+ updated results 2020-10-27 16:46:08 +01:00
Martin Diehl 0804e6ee74 pythonic names 2020-10-27 13:50:47 +01:00
Martin Diehl 201a62d7c9 easier visualization if verts have a point-cell 2020-10-27 13:19:53 +01:00
Martin Diehl 4dd387d7f5 compatibility with old pyyaml + test for numpy 2020-10-27 06:39:58 +01:00
Martin Diehl bac7ace413 Merge remote-tracking branch 'origin/general-N_constituents' into vtr-only 2020-10-13 17:39:19 +02:00
Martin Diehl 86d91baf90 0-offset for geom 2020-10-10 10:36:15 +02:00
Martin Diehl ffabeacbcb removing functionality related to deprecated 'geom' format 2020-10-10 09:41:11 +02:00
Martin Diehl 00e2128e03 don't test ASCII functionality
vtr writing in Geom class is alwas serial, no need to wait
2020-10-10 09:02:25 +02:00
Martin Diehl 0c68d293b6 N_constituents is now a general homog property 2020-10-09 07:44:05 +02:00
Martin Diehl 1b18cae46b adjusted to new names 2020-10-02 17:49:52 +02:00
Martin Diehl a04966582a Merge remote-tracking branch 'origin/development' into general-config 2020-10-02 14:54:16 +02:00
Martin Diehl 58229b8851 relaxed test conditions
even threshold between -.5 and +.5 can result in a single material.
2020-10-02 13:26:11 +02:00
Philip Eisenlohr a59e64a8e4 renamed TPMS and added more from additional references 2020-09-30 17:28:25 -04:00
Martin Diehl 33685bc493 allow user do control output style
(numerics.yaml looks strange otherwise)
2020-09-30 12:32:37 +02:00
Martin Diehl 5ad46ae021 completely tested 2020-09-30 09:05:23 +02:00
Martin Diehl bbed4f9c6e nice formatting
will be checked by pre-receive hook
2020-09-30 08:15:02 +02:00
Martin Diehl b383a4530e better name, subclassing for easy extension to load 2020-09-30 07:53:25 +02:00
Martin Diehl 54e4943353 get rid of shell scripts 2020-09-30 07:11:33 +02:00
Martin Diehl 76f07e4c1e tmp_path is preferred over tmpdir 2020-09-29 19:25:50 +02:00
Martin Diehl 8d204ea445 [skip ci] small simplification 2020-09-28 16:17:43 +02:00
Martin Diehl d2cfcdaca0 reference Data for ODF sampling (hybridIA) + skeleton of a test 2020-09-28 16:14:27 +02:00
Martin Diehl 95b85626d8 general hybridIA functionality 2020-09-28 07:40:43 +02:00
Martin Diehl 9e3506b8ef thorougly testing seeding functionality 2020-09-25 07:41:58 +02:00
Martin Diehl e8454c40c7 more tests 2020-09-24 22:59:31 +02:00
Martin Diehl 4960cf43d4 documented and tested 2020-09-24 21:43:04 +02:00
Martin Diehl e5b414419a Poisson disc for periodic situation 2020-09-24 21:26:16 +02:00
Martin Diehl ec23ab8b61 basic test for seeding 2020-09-24 21:06:26 +02:00
Martin Diehl b5ea04424b Merge remote-tracking branch 'origin/development' into seeds-module 2020-09-24 20:58:53 +02:00
Philip Eisenlohr 8c8db5b99f switched "Geom.materials" to "Geom.material" 2020-09-23 17:27:15 -04:00
Martin Diehl ae579d8baa allow to specify seed IDs explicitly 2020-09-23 09:28:00 +02:00
Philip Eisenlohr 683161d479 Merge branch 'development' into geom-fully-out-of-place 2020-09-22 15:22:58 -04:00
Philip Eisenlohr 05835bacd3 removed set_X(), duplicate(), and .homogenization; renamed ".microstructure" to ".materials" 2020-09-22 14:49:28 -04:00
Franz Roters 7801f527f2 Merge remote-tracking branch 'origin/load-save-X-no-suffix' into development 2020-09-22 14:57:39 +02:00
Philip Eisenlohr 188905766f removed Geom.get_X() methods in favor of direct property access 2020-09-21 11:13:53 -04:00
Philip Eisenlohr ca2f3f9493 set_X and add_comments methods now default to out-of-place 2020-09-21 10:29:07 -04:00
Martin Diehl 7bdd44a3d9 consistent names:
default file operations: save/load, non-default save_xx/load_xx
2020-09-20 22:04:28 +02:00
Martin Diehl d33507866d statistically more valid test 2020-09-20 21:50:52 +02:00
Martin Diehl 6ab88aad2b default format for Table is ASCII
hence, renamed load_ASCII/save_ASCII to load/save
2020-09-20 20:45:06 +02:00
Martin Diehl 5895e74029 p is never above 1
1e-4 is quite low, usually we are far above. 1e-3 from https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.normaltest.html
is not too far away.
2020-09-20 19:13:54 +02:00
Philip Eisenlohr 5b0b0de6b4 assertion reports offense; fixed seeds for spherical and fiber 2020-09-20 12:22:41 -04:00
Philip Eisenlohr 3cc319ef08 removed debug print statement in test_util 2020-09-19 14:30:58 -04:00
Philip Eisenlohr 7cbd422ae3 fixed coprime error when encountering NaN 2020-09-19 13:38:32 -04:00
Martin Diehl 6f45203c98 first version of a pyaml based class for material configuration
pyaml is (again) actively maintained and the ruamel.pyaml API is
instable
2020-09-19 13:01:19 +02:00
Martin Diehl c42511f101 small polishing 2020-09-18 16:32:59 +02:00
Martin Diehl 1849ff0330 polishing 2020-09-18 15:03:51 +02:00
Martin Diehl e2cd3da295 remaning to_xx 2020-09-18 14:29:27 +02:00
Martin Diehl cdf3323774 Merge remote-tracking branch 'origin/development' into load-save-X 2020-09-18 14:21:43 +02:00
Martin Diehl ec7dbb4c9a do not store temp files 2020-09-18 14:21:30 +02:00
Martin Diehl 70911b64ea Merge branch 'development' into texture-components-in-rotation-class2 2020-09-16 09:57:50 +02:00
Philip Eisenlohr c6be6fe87f fixed spherical component sampling and testing 2020-09-15 18:40:05 -04:00
Philip Eisenlohr 0a34e342e4 fixed fiber component sampling and testing 2020-09-15 18:14:15 -04:00
Martin Diehl 9e93e8b710 test for last commit 2020-09-15 19:59:03 +02:00
Martin Diehl 3f823ca717 testing general case 2020-09-15 14:39:05 +02:00
Martin Diehl 18c38f1284 polishing 2020-09-15 13:49:44 +02:00
Martin Diehl 2a082b7983 methods for texture component calculations 2020-09-15 12:11:46 +02:00
Philip Eisenlohr 96ad358f83 modified file reading/writing methods to load_X, save_X formalism 2020-09-15 01:14:05 -04:00
Martin Diehl f6758ecc28 table class operates out of place 2020-09-14 07:04:01 +02:00
Philip Eisenlohr 9fb3fef4b0 changed British "normalise" to US "normalize" as we (should) follow US English everywhere else. 2020-09-08 10:39:31 -04:00
Philip Eisenlohr a4785ba562 modified file writing of geom and table to a general to_file() that takes a "format=" argument 2020-09-03 10:53:16 -04:00
Philip Eisenlohr d645849baf fixed remnant occurrences of .write() --> .to_file() 2020-09-02 11:32:40 -04:00
Philip Eisenlohr 6785062a10 Merge branch 'development' into 'vtk-to-file-method'
# Conflicts:
#   python/tests/test_VTK.py
2020-08-31 21:10:29 +02:00
Martin Diehl 03b02ad641 typos/sentence 2020-08-29 16:06:10 +02:00
Martin Diehl 0d5279863d avoid rounding errors related to rotation 2020-08-27 09:33:09 +02:00
Martin Diehl 248ef8ef97 more tests
- invalid files
- scalar/array size,center,exponent for add_primitive
- rotation invariance for add primitive
2020-08-26 23:56:20 +02:00
Philip Eisenlohr 3f24d16603 renamed VTK.write() to VTK.to_file() 2020-08-26 16:15:15 -04:00
Martin Diehl fee21cbd9c more sensible tests 2020-08-25 17:17:49 +02:00
Martin Diehl 96d4975fc4 using numpy functionality 2020-08-25 08:34:04 +02:00
Martin Diehl 51da632108 aiming at testing each individual statement 2020-08-25 07:49:56 +02:00
Martin Diehl 2d98325fa4 increasing test coverage 2020-08-25 01:21:17 +02:00
Martin Diehl 453f5a14c5 duplicated test (w/o wait for parallel out) 2020-08-25 00:53:05 +02:00
Philip Eisenlohr 2560f014a3 Merge remote-tracking branch 'origin/increase-geom-test-coverage' into geom-out-of-place 2020-08-24 17:17:31 -04:00
Martin Diehl 9d505c8518 better readable
- more explicit reporting
- always relative import for DAMASK
2020-08-24 09:58:24 +02:00
Martin Diehl b393da4955 relative imports
... it's all about damask.XXX
2020-08-24 07:28:10 +02:00
Philip Eisenlohr 3738002e4a forgot the new reference files... 2020-08-23 22:27:53 -04:00
Philip Eisenlohr 446ac03b07 All geom methods are now out-of-place, i.e. return an updated duplicate (to allow for daisy chaining).
* Added comments when methods acted.
* Added diff method
* Added flip method
* Fixed add_primitive inversion bug (again...)
* Fixed cell centering bug in add_primitive

* Added missing tests
2020-08-23 19:43:46 -04:00
Martin Diehl 22da3af92e cleaning (prospector complaint) 2020-08-24 00:44:18 +02:00
Martin Diehl c7cbd961a1 more systematic monkeypatching
allows comparison of reference files (log/history does not contain
information about damask.version and datetime.datetime.now)
2020-08-24 00:31:38 +02:00
Martin Diehl 6f79573140 more test coverage 2020-08-23 11:05:56 +02:00
Martin Diehl 07af7b2f98 geom is written to vtr exlcusively, not to general vtk
base tests on vtr
2020-08-23 10:50:15 +02:00
Martin Diehl 975db01f31 microstructure -> materialpoint
at least for new functionality
2020-08-23 09:38:08 +02:00
Martin Diehl b731b1e768 Geom.to_vtk improvements
- should be integer
- should have a test
2020-08-23 08:49:49 +02:00
Philip Eisenlohr 499ce01748 added Geom.copy() method 2020-08-22 13:57:31 -04:00
Philip Eisenlohr 752d6f773b corrected add_primitive test 2020-08-09 23:14:32 +02:00
Martin Diehl 0c6ce390b5 simple IO tests
can be improved ...
2020-08-08 20:35:50 +02:00
Martin Diehl 6a5471d243 have microstructure with 'to' and 'of' 2020-08-08 20:24:36 +02:00
Martin Diehl 55a620b378 migrating to library 2020-08-08 20:14:30 +02:00
Martin Diehl a0e0f28e51 migrating shell scripts to library 2020-08-08 19:42:34 +02:00
Martin Diehl 5fcff876f9 replace selectively
useful for vicinity_offset and add_primitive
2020-08-08 18:41:47 +02:00
Karo 7824a61f2e Merge branch 'user_defined_add_calculation' into 'development'
User defined add calculation

See merge request damask/DAMASK!195
2020-08-06 00:53:16 +02:00
Philip Eisenlohr ce00371f52 fixed rounding bug and updated reference images 2020-08-05 10:44:10 -04:00
Martin Diehl 7d49606597 restored correct bound calculation
test different bounds options
2020-08-04 20:34:40 +02:00
Martin Diehl e07c00a592 polishing + simple test
autoscaling seems to be broken
2020-08-04 20:14:04 +02:00
Martin Diehl 3f2e63977d not needed anymore 2020-07-31 19:46:44 +02:00
Martin Diehl 72ea9a5cec non-vectorized formulas can be implemented in a user function 2020-07-31 19:42:44 +02:00
Martin Diehl 50d7842dbe more tests 2020-07-31 16:50:01 +02:00
Martin Diehl daab5a8952 polishing 2020-07-24 22:42:16 +02:00
Martin Diehl 326b82b3aa symmetric scatter around nominal value 2020-07-24 22:41:41 +02:00
Martin Diehl b0e06f180a reading numpy manual ...
https://numpy.org/doc/stable/reference/generated/numpy.isclose.html
rtol=1.e-8, b=1 gives atol+btol=1.e-8+1e-9, simplified to 1e-8
2020-07-13 22:48:29 +02:00
Francisco Jose Gallardo Basile e1bbaac0d7 Merge branch 'Vectorize-Orientation' into 'development'
Vectorize orientation

See merge request damask/DAMASK!186
2020-07-03 12:22:04 +02:00
Philip Eisenlohr d4f97f8346 Merge branch 'misc-improvements' into 'development'
Misc improvements

See merge request damask/DAMASK!184
2020-07-02 21:52:47 +02:00
Philip Eisenlohr 81b3c10305 removed ambiguous variable "l" 2020-07-02 10:37:57 -04:00
Philip Eisenlohr 368a241931 added testing of __iadd__ and __invert__ 2020-07-02 10:27:52 -04:00
Martin Diehl 4abd77fccf more test coverage 2020-07-01 17:31:16 +02:00
Martin Diehl be1eb996e0 more tests and cleaning 2020-07-01 15:12:34 +02:00
Martin Diehl a7e3dd5a56 Merge branch 'development' into Vectorize-Orientation 2020-07-01 13:30:39 +02:00
Martin Diehl e18a5b8a1b simplifications + more tests 2020-07-01 08:57:28 +02:00
Martin Diehl de8e9b5fc1 fast reduced operation 2020-07-01 00:37:02 +02:00
Martin Diehl 23365660d8 polishing 2020-06-30 23:18:32 +02:00
Martin Diehl ef0c78745a fix for vectorized in_SST + test 2020-06-30 23:05:41 +02:00
Martin Diehl 49d448dced vectorized and cleaned 2020-06-30 21:43:57 +02:00
Martin Diehl 9a83b11a99 testing IPF color (vectorization) 2020-06-30 18:41:59 +02:00
Martin Diehl bdb461a553 more flexible and independent 2020-06-30 18:12:39 +02:00
Martin Diehl 6e27a140f6 better split 2020-06-30 17:35:52 +02:00
Martin Diehl 3d6afff27a clearer name 2020-06-30 17:30:29 +02:00
Martin Diehl be21d1289d using slicing method 2020-06-30 16:33:04 +02:00
Martin Diehl c86e3e292c WIP: cleaning namespace 2020-06-30 14:07:10 +02:00
Martin Diehl 9d94b521ad polishing 2020-06-30 13:31:58 +02:00
Martin Diehl ce7018164f WIP: more reasonable naming 2020-06-30 13:05:06 +02:00
Philip Eisenlohr 8dc87023d1 test from_range; update ASCII colormap labels (i_RGBA) 2020-06-29 22:23:24 -04:00
f.basile d06daec4cb reducec vectorized is improved 2020-06-29 18:25:45 +02:00
Martin Diehl a657125840 standard version string 2020-06-28 19:30:23 +02:00
Martin Diehl c7eb56a63d single precision reference files 2020-06-28 19:25:58 +02:00
Martin Diehl 37f7362cbe Merge branch 'development' into misc-improvements 2020-06-28 19:23:17 +02:00
Martin Diehl 323f828606 Merge branch 'development' into modernize_colormap 2020-06-28 19:09:52 +02:00
f.basile 352c4e95f1 more vectorized 2020-06-28 19:03:06 +02:00
Martin Diehl 1cfa6d44d9 dummy version could be useful for other tests
note that monkey patching requires direct access to damask.version in
the respective modules.
'from xx import yy' creates a copy (at least for the version string).
2020-06-28 11:51:30 +02:00
Martin Diehl e6a87da37c compare to reference results
need to patch damask.version to be independent of version strings (in
json and ASCII table)
2020-06-28 11:20:09 +02:00
Martin Diehl e81b67e964 polishing 2020-06-28 10:32:59 +02:00
Martin Diehl 1c03bd157f more testing 2020-06-28 10:25:28 +02:00
Martin Diehl f4d13bc810 binary representation depends on vtk lib version 2020-06-28 10:07:31 +02:00
Martin Diehl 8d5a72e936 more test, swich to pathlib 2020-06-27 23:38:58 +02:00
Martin Diehl c929af12c0 testing/polishing 2020-06-27 19:44:12 +02:00
Martin Diehl cf63226721 testing all conversions 2020-06-27 18:55:27 +02:00
Martin Diehl e779e190ea new colormap class for use in python
- based on matplotlib "ListedColormap"
- constructors
  - Array of RGB values (inherited),
  - 'from_bounds': perceptual uniform colormap within given bounds
  - 'from_predefined': from matplotlib or DAMASK templates
- export to files (WIP)
- preview on screen
2020-06-27 16:12:40 +02:00
Martin Diehl a69f82e7c3 speed up vtk out
- limit to single precision
- write in background
2020-06-26 11:45:54 +02:00
Martin Diehl 27220a03bc not invalid anymore 2020-06-25 09:23:43 +02:00
Philip Eisenlohr e64d353865 condensed scale_to_coprime; added test of scale_to_coprime 2020-06-24 18:37:33 -04:00
Philip Eisenlohr 14d3b7e66d more f-stringing 2020-06-24 16:59:55 -04:00
Anderson Wallace Paiva do Nascimento 3d93a5ff00 Merge branch 'migrate-to-pathlib' into 'development'
Migrate to pathlib

See merge request damask/DAMASK!177
2020-06-24 14:54:36 +02:00
Martin Diehl 4c5939ef23 small polishing 2020-06-20 22:51:00 +02:00
Martin Diehl 15b43bcebf from_directions is not general, removed
polishing
2020-06-20 19:57:49 +02:00
Martin Diehl d93ed2bc5c several improvements:
- vectorized from_directions
- more tests (96% coverage, only random functionality is untested)
- updated documentation, folloing numpy standard
- inverse operator '~' introduced
2020-06-20 12:20:43 +02:00
Martin Diehl 1648963b57 vectorized equivalent orientation calculation 2020-06-18 22:53:04 +02:00
Martin Diehl d0d9245707 clearer intention 2020-06-16 23:35:50 +02:00
Samad Vakili 0f42ff6b5d reshaped F transpose error3 2020-06-10 14:02:52 +02:00
Samad Vakili 4f4d8d8c92 reshaped F transpose error2 2020-06-10 13:27:36 +02:00
Samad Vakili 7d7927e821 reshaped F transpose error 2020-06-10 13:22:57 +02:00
Samad Vakili f3d59ddfe5 F reshaped error 2020-06-10 12:00:33 +02:00
Samad Vakili 36f04309b4 issue in test_mechanics 2020-06-09 21:33:13 +02:00
Samad Vakili d365cc9e12 typo 2020-06-09 14:39:17 +02:00
Samad Vakili 2978cf72f7 check for test_mechanics 2020-06-09 14:31:20 +02:00
Samad Vakili 824682d236 checked for typo 2020-06-09 14:26:22 +02:00
Samad Vakili 627e62439b the single case is included in test file 2020-06-09 14:17:31 +02:00
f.basile a76b5233be fix pyflakes imported but unused in pytest 2 2020-06-05 13:54:38 +02:00
f.basile 54c20cdd3c fix pyflakes imported but unused in pytest 2020-06-05 13:53:47 +02:00
f.basile eae9698d22 equivalent,related and inFZ vectorized + pytest 2020-06-05 13:48:12 +02:00
Martin Diehl c67fbacfc7 higher test coverage
- invalid operations
- legacy output
2020-06-03 11:03:31 +02:00
Martin Diehl 72a0b1fae5 testing and polishing 2020-06-01 11:33:22 +02:00
Martin Diehl 1afa00a19c testing systematically all possibilities 2020-05-28 08:05:16 +02:00
Martin Diehl 00168a5939 testing 2-dim array of tensors 2020-05-27 21:07:48 +02:00
Martin Diehl 56afc03f3c only vectorized version needed
use single point/simple versions only for testing
2020-05-27 18:05:08 +02:00
Martin Diehl 31f72aa912 handle min/mid/max eigenvalues/vectors separately
storing as matrix/vector is not favorable for paraview and in many
cases, either min or max are of interest only
2020-05-27 17:39:46 +02:00
Martin Diehl addc4c36d1 test for XDMF writer
just ensure that it does not throw an exception
2020-05-26 08:06:39 +02:00
Martin Diehl 520dfe216a cleaning 2020-05-26 07:57:32 +02:00
Martin Diehl 5ad7fe04d0 bugfix:
used wrong type
2020-05-26 07:15:27 +02:00
Martin Diehl 670e08468b reorder
tests depend on other functionality that should be tested first
2020-05-26 06:49:29 +02:00
Martin Diehl 88c49fc4f4 also check values 2020-05-26 06:48:52 +02:00
Martin Diehl 9855c61747 store vtk file in tmp directory 2020-05-25 23:39:19 +02:00
Martin Diehl 9076fbe525 testing overwrite functionality 2020-05-25 23:05:31 +02:00
Martin Diehl f07eaf19d0 fixed broadcasting + corresponding test 2020-05-25 16:37:08 +02:00
Martin Diehl 784d6d09d9 cleaning 2020-05-25 15:55:38 +02:00
Martin Diehl 17aa3c00dc more tests 2020-05-24 22:52:00 +02:00
Martin Diehl 296308e11e fix for rotation around 90 deg
more tests
2020-05-24 20:52:19 +02:00
Martin Diehl a26cba1457 calling a few missing statements 2020-05-24 09:06:11 +02:00
Martin Diehl 82419f8649 testing selection 2020-05-23 10:38:25 +02:00
Martin Diehl 8a848979aa missing test for IPF color 2020-05-23 09:13:45 +02:00
Martin Diehl e2cf527dfb add missing test 2020-05-23 08:19:08 +02:00
Martin Diehl b8e83cd263 do not overwrite 2020-05-22 20:42:13 +02:00
Martin Diehl 7bd681a5ed very simple test 2020-05-22 19:04:02 +02:00
Martin Diehl 11eda510aa testing functionality of Lattice separately 2020-05-22 18:45:27 +02:00
Martin Diehl b33de48528 testing broadcasting 2020-05-22 15:12:37 +02:00
Martin Diehl 353fd3ceb6 more tests
now 95% test coverage of Rotation class
2020-05-20 19:16:31 +02:00
Martin Diehl bb419d49df polishing 2020-05-20 16:19:12 +02:00
Martin Diehl b59d773689 store all test data together 2020-05-20 15:26:49 +02:00
Martin Diehl 9240dd59b2 mark as internal
all functionality (+ sanity checks) can be done with the class
functionality
2020-05-20 11:11:07 +02:00
Martin Diehl 9694767997 all seems to work now 2020-05-20 09:01:38 +02:00
Martin Diehl 3e00269179 again some more tests 2020-05-19 23:24:12 +02:00
Martin Diehl 1c53a37de4 more tests and adjustments to tolerances 2020-05-19 21:03:30 +02:00
Martin Diehl a6b0aaffba more tests
Hotfix needed for axis angle to matrix (not used in DAMASK, needs
further investigation)
2020-05-19 19:41:50 +02:00
Martin Diehl de79a5af43 directly test the internal conversions
some work to do ...
2020-05-19 09:55:23 +02:00
Martin Diehl 065c624f94 fix for backward compatibility 2020-05-19 09:10:14 +02:00
Martin Diehl b6eebcd704 small fixes (testing P=+1) 2020-05-19 07:57:40 +02:00
Martin Diehl b200894a40 bugfix and further test 2020-05-19 07:57:40 +02:00
Martin Diehl a25dd1c438 cleaning 2020-05-19 07:57:40 +02:00
Martin Diehl a90865c877 non-vectorized versions not needed anymore
using them only for testing purposes
2020-05-17 00:10:18 +02:00
Martin Diehl 9ba419c2c3 Merge branch 'development' into vectorize_rotation 2020-05-16 20:58:06 +02:00
Martin Diehl a4dfd7fc74 missing tests 2020-05-16 17:23:05 +02:00
Martin Diehl 61ac40c259 more tests 2020-05-16 13:54:53 +02:00
Martin Diehl 9fa1539163 using new names 2020-05-16 11:17:12 +02:00
Martin Diehl 2dc46b783a simplified and tested 2020-05-16 00:58:40 +02:00
Karo 90f93d2399 Merge branch 'integrate-lambert' into 'development'
Integrate lambert

See merge request damask/DAMASK!166
2020-05-12 23:36:08 +02:00
Martin Diehl 6928a8290f less whitespace,
alingment only within one vector/tensor
2020-05-10 13:02:26 +02:00
Vitesh Shah c8701a4665 Cleanup/better readability 2020-05-08 12:15:10 +02:00
f.basile fcd0028b83 avoid line length limit (maximum line length 182 > 132 2020-05-06 14:33:04 +02:00
f.basile d977f2ad25 already merged 2020-05-06 14:26:54 +02:00
f.basile 26f55781ae merge test into gridFilters 2020-05-06 14:26:15 +02:00
f.basile a122a307b9 div test done 2020-05-06 14:14:18 +02:00
f.basile d4091a21a8 grad test done 2020-05-06 13:05:53 +02:00
f.basile 8b4baecdee better looking test fields 2020-05-06 12:54:24 +02:00
f.basile bd518b2806 test_curl done 2020-05-06 12:44:56 +02:00
Martin Diehl 9626833339 Merge branch 'development' into pytest-curl-div-grad-2 2020-05-05 22:45:30 +02:00
Vitesh Shah 307debebd4 Correct shapes for gradient calculations 2020-05-05 10:22:23 +02:00
Vitesh Shah 0650f46ab1 Tests for gradient 2020-05-05 10:13:30 +02:00
Martin Diehl 5f3f87cd68 vectorizing cubochoric conversions 2020-05-04 17:43:38 +02:00
Martin Diehl 7d1e0850ab test + resulting bug fix 2020-05-03 17:04:03 +02:00
Martin Diehl b88f5ec0c8 clean up 2020-05-01 14:53:40 +02:00
Martin Diehl 9e79935add Merge branch 'development' into less-shell-scripts 2020-04-28 20:43:16 +02:00
Martin Diehl 9273c88782 [skip ci] WIP: migrating from PRIVATE repo 2020-04-28 09:42:27 +02:00
Martin Diehl 2d14790863 the result of a differential operator operating on a constant field is 0 2020-04-27 05:08:47 +02:00
Martin Diehl 042f64200c Merge branch 'development' into vectorize_rotation 2020-04-24 06:31:14 +02:00
Francisco Jose Gallardo Basile 898cf42aca Merge branch 'fix-grid-convention' into 'development'
Fix grid convention

See merge request damask/DAMASK!160
2020-04-23 19:02:23 +02:00
Martin Diehl 3621dddd66 test deviatoric part for known analytic solution 2020-04-22 09:16:53 +02:00
Martin Diehl 53b8c1c893 simplified 2020-04-22 08:58:43 +02:00
Martin Diehl 7efe14be35 Merge branch 'development' into vectorize_rotation 2020-04-21 19:29:30 +02:00
Martin Diehl 97a5880d76 ensure correct shape 2020-04-21 13:22:55 +02:00
Martin Diehl ac75b9e4ca improved reporting + test 2020-04-21 11:17:15 +02:00
Martin Diehl 23fc58699f vectorize Rotation.fromXXX functions 2020-04-21 10:55:45 +02:00
Martin Diehl f519e62cd5 testing data layout checks 2020-04-20 13:56:33 +02:00
Martin Diehl 02dde3c255 test also invalid operations 2020-04-20 13:10:13 +02:00
Martin Diehl 9979eb58f4 consistent layout for grid data
has now always the shape ([x,y,z,...]) with x fastest. For conversion from or
to linear layout ([x*y*z,...]), e.g. storage in ASCII table, reshape needs
to have the 'F' option.
Credits to Vitesh and Fran for pointing this out.
2020-04-20 13:09:59 +02:00
Karo Sedighiani 03aa6f9c80 Merge branch 'vectorize_rotation' into development 2020-04-14 19:34:11 +02:00
Martin Diehl c0c37fe6a5 polishing 2020-04-11 20:42:46 +02:00
Martin Diehl 8c61f67e34 cleaning 2020-04-11 18:24:54 +02:00
Martin Diehl cb9daccdd7 homochoric representation vectorized 2020-04-11 16:14:40 +02:00
Martin Diehl 99655c9f61 more vectorized functions 2020-04-11 13:59:16 +02:00
Martin Diehl 4e759d6c98 more tests for orientation conversion
ensure that all parameters are within range and check if
multidimensional arrays at least run
2020-04-11 12:37:21 +02:00
Martin Diehl 59b0a6e825 tuples not needed/avoid eval 2020-04-10 13:07:05 +02:00
Martin Diehl bab3581b11 need to transpose eigenvectors to find the correct one 2020-04-09 15:01:01 +02:00
Martin Diehl e502573e05 polishing 2020-04-09 14:20:43 +02:00
Martin Diehl cbfde73a29 more testing and related fixes 2020-04-09 07:40:20 +02:00
Martin Diehl 43e7639f77 WIP: implementing orientation matrix conversions 2020-04-09 00:47:43 +02:00
Martin Diehl da30fb8396 qu(aternion) and eu(ler) vectorized and tested 2020-04-09 00:35:40 +02:00
Martin Diehl 464620b796 vectorized conversion from ax(is angle) 2020-04-08 21:24:59 +02:00
Martin Diehl 2a063b3bb5 relaxed tolerance not needed 2020-04-08 20:23:05 +02:00
Martin Diehl 59e0041fd7 more scatter, slightly reduced tolerance 2020-04-08 19:30:50 +02:00
Martin Diehl 3cd8f3d9a0 testing special orientations with scatter 2020-04-08 18:38:57 +02:00
Martin Diehl 10d5b2e791 testing some special cases 2020-04-08 13:41:46 +02:00
Martin Diehl 01818cba80 tuples not needed for single arguments 2020-03-31 12:44:39 +02:00
Martin Diehl 6ef7410e5a testing VTK wrappers 2020-03-31 11:04:06 +02:00
Martin Diehl e334674a06 test bycristal tessellation 2020-03-29 20:28:54 +02:00
Martin Diehl 9c90aa5acb polishing 2020-03-29 20:07:09 +02:00
Martin Diehl e61c1a027b avoid detour via shell 2020-03-29 19:12:23 +02:00
Martin Diehl d6f74daf53 cleaning
no DADF5 anymore
2020-03-19 08:13:13 +01:00
Martin Diehl ee0d80ce2a following python standard + polishing 2020-03-18 13:49:53 +01:00
Martin Diehl 45e3b8f7c6 no brackets for reshape required 2020-03-17 12:25:44 +01:00
Martin Diehl 7a0c20b6de Merge branch 'development' into python-style 2020-03-05 22:00:58 +01:00
Martin Diehl 4970f22e13 better name
damask.Result is more appropriate then damask.DADF5
2020-03-02 23:05:35 +01:00
Martin Diehl fd11f073f0 fixing prospector complaints 2020-02-22 00:11:00 +01:00
Martin Diehl a6279c8284 use separate test definitions per class 2020-02-22 00:03:54 +01:00
Martin Diehl a433f7ef54 style unification
backport from dadf5-usability branch
2020-02-21 13:03:50 +01:00
Martin Diehl c1caef4bc9 fixing prospector complaints 2020-02-21 08:13:10 +01:00
Martin Diehl 95cfa3f173 more tests... 2020-02-16 10:04:33 +01:00
Martin Diehl 36c1744a59 proper indentation 2020-02-16 09:21:21 +01:00
Martin Diehl 5235c27ad0 making new mechanics functions available for DADF5
+ testing them
2020-02-15 17:56:20 +01:00
Martin Diehl 118c03c485 tests for new functionality 2020-02-15 16:59:30 +01:00
Martin Diehl e46395be41 sorted alphabetically 2020-02-15 14:21:23 +01:00
Martin Diehl 79533b075e eigenvalues is more specific name than principal components 2020-02-15 13:56:15 +01:00
Martin Diehl 4c28e7f626 better have tests 2020-02-01 09:44:21 +01:00
Martin Diehl fa39a7423b preparing for actual use 2020-01-29 13:20:16 +01:00
Martin Diehl 6fed655500 fix for new style and test 2020-01-26 10:17:27 +01:00
Martin Diehl 7f92418fc4 shapes should also match 2020-01-26 10:01:00 +01:00
Martin Diehl 54d1c35c45 Merge branch 'development' into python-module 2020-01-24 08:42:28 +01:00
Martin Diehl 2ba0752b71 ensure that symmetrically equivalent rotations have the same IPF color 2020-01-14 23:56:52 +01:00
Martin Diehl 2bc93b643a testing IPF color values for cube 2020-01-14 23:17:47 +01:00
Martin Diehl 8a674d0279 2 bugfixes:
- mixed up other and me when removing quaternion class
- 1000 random orientations are enough for testing
2020-01-14 22:30:08 +01:00
Martin Diehl 18d6d364ec adjustment to tolerances
Rodrigues test is 'prone' to fail due to diverging tangens(pi/2).
Happens only with a very low chance
2020-01-14 10:57:50 +01:00
Martin Diehl af42eae9c1 Merge branch 'development' into python-module 2020-01-14 08:58:19 +01:00
Philip Eisenlohr edbee3a419 Merge branch 'development' into python-module 2020-01-13 15:24:08 -05:00
Martin Diehl 7b3015c6bd relaxed tolerances.
one out of multiple thousand tests failed ...
2020-01-13 18:44:50 +01:00
Martin Diehl f9772a3df8 more descriptive name 2020-01-13 02:51:49 +01:00
Martin Diehl 97ddd56540 avoid strange deformation gradients
otherwise, the test fails in a few cases (determinants were in the range
1e-5 to 1e16)
2020-01-11 23:44:11 +01:00
Martin Diehl aec9c601d6 some insights from continuum mechanics formulated as test 2019-12-23 15:34:13 +01:00
Martin Diehl 2cb3213e37 improvements to Table class
- string comparison  should be '!=' not 'is not', latter compares
object, not value
- functions for common operations: append (vstack, growTable) and join
(hstack, addTable)
2019-12-22 22:21:32 +01:00
Martin Diehl 48c21045d7 centralized functionality for ang import 2019-12-22 14:57:57 +01:00
Martin Diehl e08b096f08 just to make sure ... 2019-12-21 23:43:56 +01:00
Martin Diehl 2cd2d6f506 cell_2_node/node_2_cell work only for periodic data
hence, coordinates and displacements cannot be converted easily
2019-12-21 18:07:04 +01:00
Martin Diehl 2c5f7d3b5a Merge branch 'development' into grid-filters 2019-12-20 14:32:20 +01:00
Franz Roters 034367fa6a Merge remote-tracking branch 'remotes/origin/noPostResults' into development 2019-12-20 11:40:57 +01:00
f.basile 57a69ad4c9 Reupload PDF pole figures. 2019-12-13 13:32:16 +01:00
f.basile 0c30f6b1df Polishing Mtex script for plotting pole figures. 2019-12-13 12:52:33 +01:00
Philip Eisenlohr 41ed7ce462 "pip install damask" either locally or from PyPI after upload 2019-12-12 14:32:51 -05:00
Martin Diehl fcbe4ee5a2 [skip ci] polishing 2019-12-11 18:08:51 +01:00
Martin Diehl bd12ef83b9 parametrizing 2019-12-11 18:01:24 +01:00
f.basile 562d216fa9 bcc is passive rotation and fcc is active rotation 2019-12-11 09:23:12 +01:00
Martin Diehl e142d00d02 test now sensible to wrong rename 2019-12-10 20:05:24 +01:00
f.basile ca06c1d3a2 Fix bugs in relatedOperations for NW,GT and GTprime. 2019-12-10 13:49:33 +01:00
Martin Diehl 5a9173ccf4 might simplify plotting in MTEX 2019-12-08 21:57:07 +01:00
Martin Diehl fa9ee6b116 using reference results for orientation relationships 2019-12-08 21:48:32 +01:00
Martin Diehl 53cb59fc47 use pytest instead of hand-written test class 2019-12-08 21:29:26 +01:00
Martin Diehl b56864552f testing forward <-> backward conversion 2019-12-08 21:05:34 +01:00
Sharan Roongta 96710a238d Merge branch 'development' of magit1.mpie.de:damask/DAMASK into incs-no-leading-zero 2019-12-06 15:25:21 +01:00
Martin Diehl 4ddfd82304 better names 2019-12-05 18:32:21 +01:00
Martin Diehl b1ff178109 Merge branch 'new-ASCII' into grid-filters 2019-12-05 18:06:56 +01:00
Philip Eisenlohr 2648a67dcd fixed sort_by to respect updated index (upon subsequent adding of new data) 2019-12-05 12:02:10 -05:00
Martin Diehl e7358746dc taking care of prospector complaints
variables in 'eval' are hidden
2019-12-05 10:54:35 +01:00
Martin Diehl 274aaa7359 Merge branch 'new-ASCII' into grid-filters 2019-12-05 10:50:56 +01:00
Martin Diehl 1018b89296 nice to have.. 2019-12-05 10:48:42 +01:00
Martin Diehl f885748a58 variable was never used 2019-12-05 08:43:14 +01:00
Martin Diehl 469d638afb making table class feature complete 2019-12-05 06:57:09 +01:00
Martin Diehl ee8e3386f4 shorter but still descriptive names 2019-12-05 06:16:29 +01:00
Martin Diehl e7a67262f8 clear enough 2019-12-05 06:00:49 +01:00
Martin Diehl 2172e92e7e test exotic input files 2019-12-05 05:57:47 +01:00
Martin Diehl 07e9778798 one more test 2019-12-04 10:20:57 +01:00
Martin Diehl bc41bbbec5 test coordinates-related functions 2019-12-04 09:23:08 +01:00
Martin Diehl 285075bb6b ordered alphabetically 2019-12-04 06:15:32 +01:00
Martin Diehl 6902d3dd0a repeated test
better sort alphabetically
2019-12-04 06:04:06 +01:00
Martin Diehl 6c31e22855 testing new style DADF5 file 2019-12-04 05:59:52 +01:00
Martin Diehl 32ebcea207 more tests 2019-12-04 05:49:43 +01:00
Martin Diehl 3effea8e1d also check operations that should NOT work 2019-12-03 17:03:03 +01:00
Martin Diehl f5bbd3cf22 ensure functionality through unit testing 2019-12-03 16:39:54 +01:00
Martin Diehl 80002e6cfd proper capitalization 2019-11-27 13:21:41 +01:00
Martin Diehl af78aaf2f1 testing rescale 2019-11-25 14:01:40 +01:00
Martin Diehl b757f02649 avoid repetitions 2019-11-25 12:04:57 +01:00
Martin Diehl 6d25506204 test for new pack functionality 2019-11-25 09:28:59 +01:00
Martin Diehl 928a5c2e55 better use fixtures 2019-11-24 06:29:00 +01:00
Martin Diehl 2b392241f9 Merge branch 'PythonImprovements' into pytest 2019-11-23 19:25:22 +01:00
Martin Diehl 3be1caa4ef read_dataset has at least two dimensions 2019-11-23 19:21:41 +01:00
Martin Diehl eb80a82e05 first idea how to test pointwise operations 2019-11-23 18:58:44 +01:00
Martin Diehl e3f8195621 no not change line endings 2019-11-23 17:08:36 +01:00
Martin Diehl 4dc4442fae small DADF5 file for testing 2019-11-23 16:15:08 +01:00
Martin Diehl 510e4752fd using parametrized tests for better coverage 2019-11-23 14:03:47 +01:00
Martin Diehl 2810531c97 a test with reference results 2019-11-23 13:37:03 +01:00
Martin Diehl a26a5738dd polishing 2019-11-21 21:48:54 +01:00
Martin Diehl e0f3fe3cc0 ported from hand written test class 2019-11-21 21:01:01 +01:00
Martin Diehl a3376a35b7 testing mechanics module with pytest 2019-11-21 20:00:28 +01:00