Martin Diehl
cbe8160e13
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-23 19:55:34 +01:00
Martin Diehl
f85dba2835
small polishing
2020-11-23 19:43:19 +01:00
Martin Diehl
287d44c5df
Merge remote-tracking branch 'origin/development' into unit-in-vtk
2020-11-23 19:19:02 +01:00
Franz Roters
7356330cf6
Merge remote-tracking branch 'origin/new_names_result' into development
2020-11-23 11:49:15 +01:00
Sharan Roongta
c58f9f23a1
read old version while resolving merge conflicts
2020-11-22 14:32:32 +01:00
Sharan Roongta
24fabdec22
Merge branch 'development' into vector-mechanics
2020-11-22 12:02:29 +01:00
Martin Diehl
2de3a6a205
fits better to stretch_left/right
2020-11-19 22:46:52 +01:00
Martin Diehl
a87596cefc
return rotation type (ensures proper rotation)
2020-11-19 22:36:19 +01:00
Philip Eisenlohr
662a033d91
adapted to VTR geom files
2020-11-19 14:26:15 -05:00
Philip Eisenlohr
a82b1adc14
Merge branch 'geom-load-ASCII-autoshift' of magit1.mpie.de:damask/DAMASK into geom-load-ASCII-autoshift
2020-11-19 12:24:09 -05:00
Martin Diehl
a4b5c2a537
shorter (but still self-explanatory) name
2020-11-19 15:20:44 +01:00
Martin Diehl
6e5cb60132
general tensor functionality
2020-11-19 15:16:01 +01:00
Martin Diehl
894a8de9f9
avoid name clash: as_Rodrigues_vector(vector = ...)
2020-11-19 14:31:14 +01:00
Martin Diehl
1c07152b96
sorted alphabetically
2020-11-19 14:05:59 +01:00
Martin Diehl
20d0732b2e
output unit to XDMF/vtk
2020-11-19 13:45:40 +01:00
Martin Diehl
af3a87b197
adjust to new auto-convert of 1-based geom files
2020-11-19 11:34:55 +01:00
Martin Diehl
5a5dd24687
removed aliases
2020-11-19 10:50:14 +01:00
Martin Diehl
903c185ee6
distinguish 'file not found' and 'invalid file'
2020-11-19 10:39:41 +01:00
Martin Diehl
c74e57f225
vtk error handling is not very helpful
2020-11-19 09:59:39 +01:00
Martin Diehl
96826dca73
Geom.load_ASCII now auto-shifts material indices
2020-11-19 09:40:19 +01:00
Philip Eisenlohr
cb22c34db2
Geom.load_ASCII now auto-shifts material indices
2020-11-18 18:25:25 -05:00
Martin Diehl
b9b26cb2cc
output results for all constituents
2020-11-18 23:36:02 +01:00
Martin Diehl
5359e05fd3
always merge homogenization results
2020-11-18 23:17:12 +01:00
Martin Diehl
b885e38b3f
better readable
2020-11-18 22:12:23 +01:00
Martin Diehl
4bf802a28e
fixed documentation
2020-11-18 21:51:37 +01:00
Martin Diehl
843d7d8cac
Merge remote-tracking branch 'origin/development' into new_names_result
2020-11-18 21:37:52 +01:00
Martin Diehl
7352431143
vectorized
2020-11-18 20:10:04 +01:00
Martin Diehl
564ee6c96a
make uvw/hkl keyword-only arguments
...
avoid to prefer one over the other, since they are mutually exclusive
2020-11-18 16:45:53 +01:00
Martin Diehl
c60d9cde2a
merge 'mechanics' datasets
...
was like that for 'generic'. Needs detailed discussion in future
2020-11-18 15:52:55 +01:00
Martin Diehl
838a4ea592
[skip ci] fix for scalar values
2020-11-18 14:57:32 +01:00
Martin Diehl
870c0f7aca
removed aliases
...
required bump of DADF5 version
2020-11-18 14:53:11 +01:00
Martin Diehl
1c9028d0b1
simplified
2020-11-18 14:01:52 +01:00
Martin Diehl
89c748fdf1
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-18 13:55:05 +01:00
Martin Diehl
9a1e8e3c38
for the transition period
2020-11-18 13:28:53 +01:00
f.basile
7291b95055
avoid pyflake for blank line 6 final
2020-11-18 12:29:10 +01:00
f.basile
ee5822b721
avoid pyflake for blank line 5
2020-11-18 12:25:08 +01:00
f.basile
4dbfad74cb
avoid pyflake for blank line 4
2020-11-18 12:24:17 +01:00
f.basile
eda3837874
avoid pyflake for blank line 3
2020-11-18 12:21:09 +01:00
f.basile
c681101136
avoid pyflake for blank line 2
2020-11-18 12:19:47 +01:00
f.basile
33aa888fc7
avoid pyflake for blank line
2020-11-18 12:17:05 +01:00
f.basile
e8f82d52cc
fix bug
2020-11-18 12:16:08 +01:00
f.basile
be206d28b3
vectorized and more options
2020-11-18 12:14:12 +01:00
Martin Diehl
6bedd84759
self-explanatory names
2020-11-18 08:15:04 +01:00
Martin Diehl
cd8434b991
Merge remote-tracking branch 'origin/development' into python-improvements
2020-11-16 22:57:49 +01:00
Sharan Roongta
c16ad845bc
Merge branch 'modernize-testing' into 'development'
...
Modernize testing
See merge request damask/DAMASK!280
2020-11-16 20:10:38 +01:00
Martin Diehl
a8fec922d5
show name in title
2020-11-16 17:25:13 +01:00
Philip Eisenlohr
5a53f8743b
added to docstring
2020-11-16 10:44:33 -05:00
Philip Eisenlohr
fa25a13264
fixed typo
2020-11-16 10:34:49 -05:00
Philip Eisenlohr
de20e6b35d
code shortening; list_predefined() --> property "predefined"
2020-11-16 10:23:26 -05:00
Martin Diehl
5ebde607a2
einsum simplifications
2020-11-16 07:43:20 +01:00
Martin Diehl
9b9d83d93c
adding '_tensor' not needed
2020-11-16 01:15:39 +01:00
Martin Diehl
b893967b68
more systematic names and extended docstrings
2020-11-16 01:02:36 +01:00
Martin Diehl
6f81f5278d
separating general tensor math from mechanics operations
2020-11-16 00:13:34 +01:00
Martin Diehl
b3955573f6
using new tests
2020-11-15 22:39:47 +01:00
Martin Diehl
fd8743af5e
clearly distinguish seeds for tessellation and seeds for RNG
2020-11-15 13:49:17 +01:00
Martin Diehl
1541ac0add
more intuitive use
2020-11-15 12:38:54 +01:00
Martin Diehl
01d84c1477
testing also functions with graphical output
2020-11-15 11:49:52 +01:00
Martin Diehl
15af12bbb4
__ne__ is automatically set to !__eq__, __neq__ has no special meaning
2020-11-15 11:38:26 +01:00
Martin Diehl
51e5dda702
documentation + consistent string formatting
2020-11-15 10:54:20 +01:00
Martin Diehl
05c1007add
documentation improvments + acceptance of lists
...
example code at respective function, no space in 'or' variable names
(sphinx cannot handle this)
2020-11-15 10:31:01 +01:00
Martin Diehl
1eb9d494c7
not specific to Orientation class
2020-11-14 19:51:15 +01:00
Martin Diehl
149fce0a7e
increase test coverage
2020-11-14 19:42:52 +01:00
Martin Diehl
764aacf2a1
increasing test coverage
2020-11-14 17:54:47 +01:00
Martin Diehl
9eb4e2d0de
corrected handling of scalar/array arguments
...
+ more tests
+ corrected handling of numpy types
2020-11-14 17:26:38 +01:00
Martin Diehl
6529613726
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-14 15:10:52 +01:00
Martin Diehl
bacfe9f462
Merge branch 'fix-add_primitive-rotation' into 'development'
...
Avoids coordinate normalization _before_ rotation
See merge request damask/DAMASK!276
2020-11-13 14:11:54 +01:00
Martin Diehl
7b7b449877
testing fixed behavior
2020-11-13 06:50:57 +01:00
Philip Eisenlohr
b3e8b85d25
normalizing coordinates _before_ rotation causes wrong primitive shape for non-cubic VEs
2020-11-12 18:34:29 -05:00
Martin Diehl
e15678e7a4
consistent handling of comments
2020-11-12 21:31:09 +01:00
Martin Diehl
8429a9d695
Merge remote-tracking branch 'origin/development' into modularize-mech
2020-11-11 07:04:23 +01:00
Martin Diehl
e90c20ccd6
Merge remote-tracking branch 'origin/geom-attributes-as-checked-properties' into development
2020-11-10 14:54:40 +01:00
Martin Diehl
5926f84851
WIP: refactoring Orientation=Symmetry+Rotation, Lattice=subclass of Sym, and Crystal=Lattice+Rotation
2020-11-09 21:20:56 +01:00
Philip Eisenlohr
f105631015
redefined attributes material,size,origin,comments as properties; enhanced help/descriptions
2020-11-08 12:11:30 -05:00
Sharan Roongta
287d56fc3d
consistent with new output names
2020-11-08 16:01:11 +01:00
Sharan Roongta
7d4163e8a9
new format of material.yaml
2020-11-08 15:57:06 +01:00
Martin Diehl
03a68248b5
polishing
2020-11-06 13:25:00 +01:00
Martin Diehl
bbaeeb02da
Merge remote-tracking branch 'origin/misc-improvements' into h5py3
2020-11-06 13:19:47 +01:00
Martin Diehl
58a5d2666c
ensure correct Mises mode
2020-11-06 00:10:46 +01:00
Martin Diehl
4ccd068d3b
catch error in case of exisiting dataset
2020-11-05 23:00:56 +01:00
Martin Diehl
e649fb195f
update to use variable-length strings
2020-11-05 22:34:41 +01:00
Martin Diehl
30938a8278
correct order (brackets)
2020-11-05 21:38:00 +01:00
Martin Diehl
e26bb962c8
encode from str to bytes
2020-11-05 21:19:49 +01:00
Martin Diehl
68d384bbdd
bugfix: missing rename
2020-11-05 21:14:02 +01:00
Martin Diehl
a416f5ed5b
encode/decode for h5py3 not needed anymore
...
attribute values with variable-length strings will be interpreted as
str, not bytes
2020-11-05 16:13:29 +01:00
Martin Diehl
708c83dcf1
polishing
2020-11-05 07:15:59 +01:00
Martin Diehl
1fcf9cb721
don't compute silently the wrong von Mises kind
...
and allow the user to set it explicitly
2020-11-05 05:48:12 +01:00
Martin Diehl
7341b9830a
h5py v 3.x handles strings differently
2020-11-05 05:39:45 +01:00
Martin Diehl
01af348cd9
symmetric behavior load/save
...
default name reflects fact that material.yaml has a fixed name
2020-11-04 21:14:08 +01:00
Martin Diehl
ae959b9cc2
allow '.' in filenames
2020-11-04 18:08:04 +01:00
Philip Eisenlohr
eaceb16203
added +1 to nanmax(material) as auto offset, now consistent with help and intention...
2020-11-03 17:43:57 -05:00
Sharan Roongta
11f1f4f555
Merge branch 'modernize-testing' into development
2020-11-03 12:49:19 +01:00
Philip Eisenlohr
2867050397
corrected shortened test logic
2020-11-02 18:31:37 -05:00
Philip Eisenlohr
4fa44d388d
shortened test for monotonous increase of material index after sorting
2020-11-02 18:21:51 -05:00
Philip Eisenlohr
4d4278e6dd
shortened tainted_neighborhood logic
2020-11-02 18:20:52 -05:00
Martin Diehl
cf958d32b4
Merge branch 'development' into vector-mechanics
2020-11-02 15:23:11 +01:00
Martin Diehl
be47c744d8
Merge branch 'development' into geom-sort
2020-11-02 12:26:31 +01:00
Martin Diehl
212ed62b19
pytest-based tests
...
removed unused functionality from deprecated python library modules
2020-11-02 12:07:16 +01:00
Martin Diehl
086b215d94
Merge branch 'test-new-dir' into development
2020-11-01 19:29:52 +01:00
Martin Diehl
cf18954db9
hint for future improvement
2020-11-01 19:20:52 +01:00
Martin Diehl
7059e6af6e
might not be in the last line
2020-11-01 18:34:52 +01:00
Martin Diehl
946da2379b
Merge remote-tracking branch 'origin/development' into modernize-testing
2020-11-01 10:06:52 +01:00
Martin Diehl
0a3598c338
Merge branch 'simplify-from_table' into development
2020-10-31 22:34:17 +01:00
Martin Diehl
0ebb9b611d
functionality to sort material id
...
convenient for layered materials
2020-10-31 20:46:21 +01:00
Martin Diehl
67f69fc8a5
data is consecutive
2020-10-31 17:23:58 +01:00
Martin Diehl
8224122bb9
more user friendly error handling
2020-10-31 13:16:25 +01:00
Martin Diehl
cf740a279e
combine constant with varying data
2020-10-31 09:56:43 +01:00
Martin Diehl
aecf2f539e
allow one homogenization
...
quite useless ...
2020-10-30 22:26:02 +01:00
Martin Diehl
c29e3650f3
don't squeeze into scalar
2020-10-30 22:24:27 +01:00
Franz Roters
392803e47d
Merge remote-tracking branch 'origin/Marc_version_names' into development
2020-10-30 17:49:18 +01:00
Philip Eisenlohr
46e5023f8b
Merge branch 'geom-improvements' into 'development'
...
Geom improvements
See merge request damask/DAMASK!264
2020-10-29 23:53:33 +01:00
Martin Diehl
b2289e80b2
simplified
2020-10-29 20:09:13 +01:00
Martin Diehl
0e499eedf3
correct rounding/clearer logic
2020-10-29 18:35:22 +01:00
Martin Diehl
4b700d367e
improved test
2020-10-29 17:59:44 +01:00
Vitesh Shah
904c338b13
Reflect version underscore of installation files
2020-10-29 15:21:40 +01:00
Martin Diehl
999cf53c07
tests+fixes
2020-10-29 07:42:41 +01:00
Martin Diehl
3be0c462a8
explicit is better then implicit:
...
user should sort Table according to coordinates to create geometry. This
allows to have consistent behavior for from_table in Geom and
ConfigMaterial. We always ensure to keep the order
2020-10-29 07:25:16 +01:00
Martin Diehl
1b2cd6caf6
documentation was misleading
2020-10-28 21:53:46 +01:00
Martin Diehl
4ff99a7af4
more logical layout
2020-10-28 21:51:20 +01:00
Martin Diehl
855bf124d3
faster
...
https://stackoverflow.com/questions/16992713
2020-10-28 16:53:16 +01:00
Sharan Roongta
21f095c9d8
Merge branch 'flexible-yaml-dump' into development
2020-10-28 16:19:17 +01:00
Martin Diehl
98e0ef3881
no loops
...
taken from https://stackoverflow.com/questions/3403973
2020-10-28 13:38:20 +01:00
Martin Diehl
d72343c865
keep order of unique values found in table
2020-10-28 11:56:28 +01:00
Martin Diehl
b38a498197
fast
2020-10-28 09:43:20 +01:00
Martin Diehl
5f03e8cf8f
0-based material indices
2020-10-28 09:31:55 +01:00
Martin Diehl
a5a127b787
new tests+ updated results
2020-10-27 16:46:08 +01:00
Martin Diehl
0804e6ee74
pythonic names
2020-10-27 13:50:47 +01:00
Martin Diehl
fa67a2ddf8
cell_coordinates is now a property
2020-10-27 13:35:14 +01:00
Martin Diehl
201a62d7c9
easier visualization if verts have a point-cell
2020-10-27 13:19:53 +01:00
Martin Diehl
4dd387d7f5
compatibility with old pyyaml + test for numpy
2020-10-27 06:39:58 +01:00
Martin Diehl
4159ae5f3d
keep order of keys
2020-10-26 21:44:38 +01:00
Martin Diehl
5834d95012
support for more types
...
- allow to directly use Config and its sublasses (cast to dict)
- convert numpy arrays
2020-10-26 21:38:24 +01:00
f.basile
802e09be4f
python/damask/_geom.py exceeds line length limit (maximum line length 143 > 132)
2020-10-26 15:11:06 +01:00
f.basile
2715e7b1a7
a bit more vectorized
2020-10-26 15:09:32 +01:00
f.basile
1cbfa866d2
get rid of scalar variables
2020-10-23 16:23:36 +02:00
Vitesh Shah
bd67296e8d
MARC_VERSION as MSCVERSION
2020-10-22 11:50:13 +02:00
f.basile
7fa31a8a1b
solving imported but unused pyflake
2020-10-19 12:55:35 +02:00
f.basile
4c22efc6ce
added show GB
2020-10-19 12:52:10 +02:00
Martin Diehl
bac7ace413
Merge remote-tracking branch 'origin/general-N_constituents' into vtr-only
2020-10-13 17:39:19 +02:00
Martin Diehl
86d91baf90
0-offset for geom
2020-10-10 10:36:15 +02:00
Martin Diehl
ffabeacbcb
removing functionality related to deprecated 'geom' format
2020-10-10 09:41:11 +02:00
Martin Diehl
00e2128e03
don't test ASCII functionality
...
vtr writing in Geom class is alwas serial, no need to wait
2020-10-10 09:02:25 +02:00
Martin Diehl
06d11a72da
better fitting name
...
load implies a more direct takeover.
2020-10-09 19:19:05 +02:00
Martin Diehl
57180952ec
typo
2020-10-09 19:05:05 +02:00
Martin Diehl
347c88cbb6
documented
2020-10-09 14:24:29 +02:00
Martin Diehl
75401dd280
generate configuration from table
2020-10-09 07:45:20 +02:00
Martin Diehl
0c68d293b6
N_constituents is now a general homog property
2020-10-09 07:44:05 +02:00
Martin Diehl
6ecaaa31c9
fairly general function to generate material configuration
2020-10-08 22:07:26 +02:00
Martin Diehl
952ad4f8fe
functionality for geom generation in python lib
2020-10-08 18:39:05 +02:00
Martin Diehl
3050471a2d
avoid circular inclusion
2020-10-08 18:05:03 +02:00
Philip Eisenlohr
846cbdd2e4
Merge branch 'general-config' into 'development'
...
General config
See merge request damask/DAMASK!245
2020-10-08 00:48:16 +02:00
Martin Diehl
8d4adebea2
pyaml is now needed
2020-10-06 17:46:34 +02:00
Martin Diehl
3d49678e93
new names part 2
2020-10-02 17:51:33 +02:00
Martin Diehl
1b18cae46b
adjusted to new names
2020-10-02 17:49:52 +02:00
Martin Diehl
a04966582a
Merge remote-tracking branch 'origin/development' into general-config
2020-10-02 14:54:16 +02:00
Martin Diehl
58229b8851
relaxed test conditions
...
even threshold between -.5 and +.5 can result in a single material.
2020-10-02 13:26:11 +02:00
Martin Diehl
b29f22f513
documenting the actually available TMPS
2020-10-01 09:25:32 +02:00
Philip Eisenlohr
a59e64a8e4
renamed TPMS and added more from additional references
2020-09-30 17:28:25 -04:00
Martin Diehl
33685bc493
allow user do control output style
...
(numerics.yaml looks strange otherwise)
2020-09-30 12:32:37 +02:00
Martin Diehl
5ad46ae021
completely tested
2020-09-30 09:05:23 +02:00
Martin Diehl
fdfcb16d15
not needed
2020-09-30 08:16:12 +02:00
Martin Diehl
bbed4f9c6e
nice formatting
...
will be checked by pre-receive hook
2020-09-30 08:15:02 +02:00
Martin Diehl
b383a4530e
better name, subclassing for easy extension to load
2020-09-30 07:53:25 +02:00
Martin Diehl
54e4943353
get rid of shell scripts
2020-09-30 07:11:33 +02:00
Martin Diehl
76f07e4c1e
tmp_path is preferred over tmpdir
2020-09-29 19:25:50 +02:00
Philip Eisenlohr
350f5eb66a
improved from_ODF documentation
2020-09-29 12:55:00 -04:00
Philip Eisenlohr
31f86c28f4
[skip ci] added parameter description; shortened hybrid_IA pre-loop logic
2020-09-29 11:15:10 -04:00
Martin Diehl
8d204ea445
[skip ci] small simplification
2020-09-28 16:17:43 +02:00
Martin Diehl
d2cfcdaca0
reference Data for ODF sampling (hybridIA) + skeleton of a test
2020-09-28 16:14:27 +02:00
Martin Diehl
95b85626d8
general hybridIA functionality
2020-09-28 07:40:43 +02:00
Martin Diehl
8ec1014134
Merge remote-tracking branch 'origin/development' into cleaning
2020-09-27 18:11:43 +02:00
Vitesh Shah
e8e1960391
Consistency for docstrings
2020-09-26 18:02:25 +02:00
Vitesh Shah
d0028b2eea
Merge branch 'development' into fix-docstrings-for-sphinx
2020-09-26 17:56:42 +02:00
Martin Diehl
9e3506b8ef
thorougly testing seeding functionality
2020-09-25 07:41:58 +02:00
Philip Eisenlohr
e58cc4bfa0
removed substitute call for direct mapping; added seed from averaging of material ID cloud
2020-09-24 22:06:43 -04:00
Martin Diehl
e8454c40c7
more tests
2020-09-24 22:59:31 +02:00
Martin Diehl
4960cf43d4
documented and tested
2020-09-24 21:43:04 +02:00
Martin Diehl
e5b414419a
Poisson disc for periodic situation
2020-09-24 21:26:16 +02:00
Martin Diehl
ec23ab8b61
basic test for seeding
2020-09-24 21:06:26 +02:00
Martin Diehl
b5ea04424b
Merge remote-tracking branch 'origin/development' into seeds-module
2020-09-24 20:58:53 +02:00
Philip Eisenlohr
8c8db5b99f
switched "Geom.materials" to "Geom.material"
2020-09-23 17:27:15 -04:00
Martin Diehl
b995f34834
Merge branch 'development' into geom-fully-out-of-place
2020-09-23 22:50:20 +02:00
Martin Diehl
8c83566b71
suppress warning
...
we already handle the invalid FPE
2020-09-23 21:10:39 +02:00
Martin Diehl
9bce1ddc29
simplified
2020-09-23 20:48:34 +02:00
Franz Roters
3612b17295
corrected Sphinx warnings
2020-09-23 16:21:20 +02:00
Martin Diehl
c85d27baec
functionality for seed creation
2020-09-23 09:45:36 +02:00
Martin Diehl
ae579d8baa
allow to specify seed IDs explicitly
2020-09-23 09:28:00 +02:00
Sharan Roongta
5a64dd30e1
Merge branch 'development' into modernize-testing
2020-09-23 00:05:59 +02:00
Philip Eisenlohr
683161d479
Merge branch 'development' into geom-fully-out-of-place
2020-09-22 15:22:58 -04:00
Philip Eisenlohr
05835bacd3
removed set_X(), duplicate(), and .homogenization; renamed ".microstructure" to ".materials"
2020-09-22 14:49:28 -04:00
Martin Diehl
716a406361
Merge remote-tracking branch 'origin/master' into modernize-testing
2020-09-22 16:51:36 +02:00
Franz Roters
7801f527f2
Merge remote-tracking branch 'origin/load-save-X-no-suffix' into development
2020-09-22 14:57:39 +02:00
Martin Diehl
5ef761fb98
inform the user about missing items in material.yaml
2020-09-21 19:10:20 +02:00
Philip Eisenlohr
188905766f
removed Geom.get_X() methods in favor of direct property access
2020-09-21 11:13:53 -04:00
Philip Eisenlohr
ca2f3f9493
set_X and add_comments methods now default to out-of-place
2020-09-21 10:29:07 -04:00
Martin Diehl
7bdd44a3d9
consistent names:
...
default file operations: save/load, non-default save_xx/load_xx
2020-09-20 22:04:28 +02:00
Martin Diehl
d33507866d
statistically more valid test
2020-09-20 21:50:52 +02:00
Martin Diehl
6ab88aad2b
default format for Table is ASCII
...
hence, renamed load_ASCII/save_ASCII to load/save
2020-09-20 20:45:06 +02:00
Martin Diehl
5895e74029
p is never above 1
...
1e-4 is quite low, usually we are far above. 1e-3 from https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.normaltest.html
is not too far away.
2020-09-20 19:13:54 +02:00
Philip Eisenlohr
5b0b0de6b4
assertion reports offense; fixed seeds for spherical and fiber
2020-09-20 12:22:41 -04:00
Philip Eisenlohr
3cc319ef08
removed debug print statement in test_util
2020-09-19 14:30:58 -04:00
Philip Eisenlohr
7cbd422ae3
fixed coprime error when encountering NaN
2020-09-19 13:38:32 -04:00
Martin Diehl
6f45203c98
first version of a pyaml based class for material configuration
...
pyaml is (again) actively maintained and the ruamel.pyaml API is
instable
2020-09-19 13:01:19 +02:00
Martin Diehl
0746a2f3a4
give visual feedback
...
in most tests, this is done manually
2020-09-19 08:33:15 +02:00
Martin Diehl
c42511f101
small polishing
2020-09-18 16:32:59 +02:00
Martin Diehl
f23b89f055
get rid of annoying warning during test
2020-09-18 16:30:22 +02:00
Martin Diehl
c935ba1215
user friendly self reporting
2020-09-18 16:23:23 +02:00
Martin Diehl
1849ff0330
polishing
2020-09-18 15:03:51 +02:00
Martin Diehl
e2cd3da295
remaning to_xx
2020-09-18 14:29:27 +02:00
Martin Diehl
cdf3323774
Merge remote-tracking branch 'origin/development' into load-save-X
2020-09-18 14:21:43 +02:00
Martin Diehl
ec7dbb4c9a
do not store temp files
2020-09-18 14:21:30 +02:00
Franz Roters
190f8a82d4
Merge branch 'texture-components-in-rotation-class2' into 'development'
...
Texture components in rotation class2
See merge request damask/DAMASK!225
2020-09-18 13:31:42 +02:00
Vitesh
ca689193f6
Merge branch 'new-random-style' into 'development'
...
new style for numpy random numbers
See merge request damask/DAMASK!224
2020-09-16 11:12:55 +02:00
Martin Diehl
70911b64ea
Merge branch 'development' into texture-components-in-rotation-class2
2020-09-16 09:57:50 +02:00
Martin Diehl
c71768a37a
polishing
2020-09-16 06:33:17 +02:00
Philip Eisenlohr
ed006d1a89
streamlined fiber/spherical component sampling
2020-09-15 19:12:30 -04:00
Philip Eisenlohr
c6be6fe87f
fixed spherical component sampling and testing
2020-09-15 18:40:05 -04:00
Philip Eisenlohr
82ed546ff7
Merge branch 'texture-components-in-rotation-class2' of magit1.mpie.de:damask/DAMASK into texture-components-in-rotation-class2
2020-09-15 18:14:19 -04:00
Philip Eisenlohr
0a34e342e4
fixed fiber component sampling and testing
2020-09-15 18:14:15 -04:00
Philip Eisenlohr
d6378ec9bc
shortened from_fiber_component algorithm
2020-09-15 16:34:19 -04:00
Martin Diehl
ad2badd3be
[skip ci] vectorized and simplified
...
based on Philips ideas. Test requires from_axis_angle fix
2020-09-15 22:13:28 +02:00
Martin Diehl
9e93e8b710
test for last commit
2020-09-15 19:59:03 +02:00
Philip Eisenlohr
d02617c961
fixed normalization of multidimensional axes (from_Rodrigues, from_axis_angle)
2020-09-15 13:09:24 -04:00
Martin Diehl
3f823ca717
testing general case
2020-09-15 14:39:05 +02:00
Martin Diehl
18c38f1284
polishing
2020-09-15 13:49:44 +02:00
Martin Diehl
2a082b7983
methods for texture component calculations
2020-09-15 12:11:46 +02:00
Martin Diehl
82e41d92ce
new style for numpy random numbers
...
https://numpy.org/doc/stable/reference/random/index.html?highlight=random#quick-start
https://albertcthomas.github.io/good-practices-random-number-generators/
2020-09-15 08:12:02 +02:00
Philip Eisenlohr
2114c51098
revert mistakenly made header length change in array-comparison
2020-09-15 01:47:26 -04:00
Philip Eisenlohr
96ad358f83
modified file reading/writing methods to load_X, save_X formalism
2020-09-15 01:14:05 -04:00
Martin Diehl
b298962101
Merge branch 'development' into table-out-of-place-only
2020-09-14 08:06:44 +02:00
Martin Diehl
f6758ecc28
table class operates out of place
2020-09-14 07:04:01 +02:00
Martin Diehl
a5d5638e4a
allow uncompressed files
2020-09-12 13:46:55 +02:00
Philip Eisenlohr
865c90d00b
first check data type, then determine length of data...
2020-09-09 19:10:03 -04:00
Philip Eisenlohr
7d9a4c08ce
Do not strictly require np.ndarrays for grid, size, or origin when not essential for functionality.
2020-09-10 00:59:40 +02:00
Philip Eisenlohr
9fb3fef4b0
changed British "normalise" to US "normalize" as we (should) follow US English everywhere else.
2020-09-08 10:39:31 -04:00
Philip Eisenlohr
a4785ba562
modified file writing of geom and table to a general to_file() that takes a "format=" argument
2020-09-03 10:53:16 -04:00
Philip Eisenlohr
d645849baf
fixed remnant occurrences of .write() --> .to_file()
2020-09-02 11:32:40 -04:00
Philip Eisenlohr
6785062a10
Merge branch 'development' into 'vtk-to-file-method'
...
# Conflicts:
# python/tests/test_VTK.py
2020-08-31 21:10:29 +02:00
Franz Roters
6986d20b32
Merge branch 'geom-out-of-place' into 'development'
...
Geom methods are now out-of-place, i.e. return an updated duplicate
See merge request damask/DAMASK!203
2020-08-31 12:39:01 +02:00
Martin Diehl
03b02ad641
typos/sentence
2020-08-29 16:06:10 +02:00
Martin Diehl
c58693328e
don't try to access folders that don't exist
...
this happened in the case when different types of output exist in
different phases, e.g.
Aluminum: generic, plastic, sources
Steel: generic, plastic
We are a little bit inconsistent because 'generic' and 'plastic' are
always created (even if empty) but 'sources' will only exist if it
contains output. In future, we should have only folders that actually
contain data
2020-08-28 12:45:41 +02:00
Franz Roters
9457435612
Merge branch 'polishing-for-release' into 'development'
...
Polishing for release
See merge request damask/DAMASK!206
2020-08-27 17:01:43 +02:00
Martin Diehl
0d5279863d
avoid rounding errors related to rotation
2020-08-27 09:33:09 +02:00
Martin Diehl
94797f8325
ignore all kinds of FPE
2020-08-27 09:32:49 +02:00
Martin Diehl
c5761831e2
more meaningful message
...
if add_xxx (Results) does not find matching datasets, inform the user
about this fact instead of saying
TypeError: object of type 'IMapUnorderedIterator' has no len()
2020-08-27 00:14:37 +02:00
Philip Eisenlohr
c2191fd930
Make logic to mask (outside of) primitive more apparent (hopefully).
2020-08-27 00:06:52 +02:00
Martin Diehl
248ef8ef97
more tests
...
- invalid files
- scalar/array size,center,exponent for add_primitive
- rotation invariance for add primitive
2020-08-26 23:56:20 +02:00
Martin Diehl
229f6139c8
better user experience
...
- no meaningless warnings regarding floating point precision
- meaningful error message for invalid header
2020-08-26 23:54:56 +02:00
Philip Eisenlohr
b9f1421c6b
[skip ci] removed unnecessary line continuations "\"
2020-08-26 17:27:08 -04:00
Philip Eisenlohr
3f24d16603
renamed VTK.write() to VTK.to_file()
2020-08-26 16:15:15 -04:00
Philip Eisenlohr
da46e5ea9a
cannot use np.linalg.norm when dealing with exponent triple
2020-08-26 15:49:25 -04:00
Philip Eisenlohr
06b524d13e
added 'iso' as possible lattice (with no symmetry)
2020-08-26 21:39:20 +02:00
Sharan Roongta
68c2908ba8
Merge branch 'rename-hdf5-output' into development
2020-08-26 12:34:56 +02:00
Martin Diehl
fee21cbd9c
more sensible tests
2020-08-25 17:17:49 +02:00
Martin Diehl
bf401e56cf
avoid name clash with damask.Geom
2020-08-25 09:56:24 +02:00
Martin Diehl
800dac5d01
correct type handling
...
no reason to calculate fill twice
2020-08-25 08:47:24 +02:00
Martin Diehl
96d4975fc4
using numpy functionality
2020-08-25 08:34:04 +02:00
Martin Diehl
51da632108
aiming at testing each individual statement
2020-08-25 07:49:56 +02:00
Martin Diehl
2d98325fa4
increasing test coverage
2020-08-25 01:21:17 +02:00
Martin Diehl
453f5a14c5
duplicated test (w/o wait for parallel out)
2020-08-25 00:53:05 +02:00
Martin Diehl
2751cdb6af
support comments also in vtr
2020-08-25 00:40:14 +02:00
Martin Diehl
9a2ac31545
explicit is better then implicit
2020-08-24 23:35:46 +02:00
Martin Diehl
0ceba2a6d3
use central functionality
2020-08-24 23:28:26 +02:00
Martin Diehl
71e08ea66a
small fixes:
...
- numpy has multiple float variants
- start renaming microstructure -> materialpoint where it does not hurt
- no need for type check if comparing against set of valid directions
(or I miss some corner cases)
2020-08-24 23:23:47 +02:00
Philip Eisenlohr
2560f014a3
Merge remote-tracking branch 'origin/increase-geom-test-coverage' into geom-out-of-place
2020-08-24 17:17:31 -04:00
Martin Diehl
55443a3ff5
reflect change of variable names in file layout version
2020-08-24 22:54:09 +02:00
Martin Diehl
279d43ccc6
include version info + date in comments (Table class)
2020-08-24 19:04:59 +02:00
Martin Diehl
9d505c8518
better readable
...
- more explicit reporting
- always relative import for DAMASK
2020-08-24 09:58:24 +02:00
Martin Diehl
b393da4955
relative imports
...
... it's all about damask.XXX
2020-08-24 07:28:10 +02:00
Martin Diehl
0d3ef29554
more logical encapsulation
...
- getting data out of VTK is a functionality of the VTK class. Need to
discuss whether the VTK class should also provide grid and size (works
only for rectilinear grid, so hiding VTK type is not possible
anymore), but the current situation requires the Geom class to rely on
'internals' of the VTK class
- header is specific to *.geom format, not to Geom objects.
2020-08-24 06:46:22 +02:00
Martin Diehl
507a165733
functionality for getting data
...
- handy for Geom class, but could be of general interest
- add/set/get comments: follows same functions as for Geom class
2020-08-24 06:40:36 +02:00
Philip Eisenlohr
3738002e4a
forgot the new reference files...
2020-08-23 22:27:53 -04:00
Philip Eisenlohr
446ac03b07
All geom methods are now out-of-place, i.e. return an updated duplicate (to allow for daisy chaining).
...
* Added comments when methods acted.
* Added diff method
* Added flip method
* Fixed add_primitive inversion bug (again...)
* Fixed cell centering bug in add_primitive
* Added missing tests
2020-08-23 19:43:46 -04:00
Martin Diehl
22da3af92e
cleaning (prospector complaint)
2020-08-24 00:44:18 +02:00
Martin Diehl
44015082a3
dead code (copy and paste error)
2020-08-24 00:34:07 +02:00
Martin Diehl
c7cbd961a1
more systematic monkeypatching
...
allows comparison of reference files (log/history does not contain
information about damask.version and datetime.datetime.now)
2020-08-24 00:31:38 +02:00
Martin Diehl
9867830d68
store history of geometry modifications
2020-08-23 23:52:48 +02:00
Martin Diehl
a1c78b778a
WIP: track history in VTK objects
2020-08-23 23:22:53 +02:00
Martin Diehl
7b50a3b364
material.config is not used anymore
2020-08-23 15:20:11 +02:00
Martin Diehl
d65371d42f
removed unused and untested functionality
...
PEP 20: Explicit is better than implicit.
2020-08-23 12:55:55 +02:00
Martin Diehl
6f79573140
more test coverage
2020-08-23 11:05:56 +02:00
Martin Diehl
07af7b2f98
geom is written to vtr exlcusively, not to general vtk
...
base tests on vtr
2020-08-23 10:50:15 +02:00
Martin Diehl
64e7582e8e
consistent interface to ndimage filters
...
Boolean 'periodic' sets mode to 'wrap' or 'nearest'
2020-08-23 10:02:22 +02:00
Martin Diehl
975db01f31
microstructure -> materialpoint
...
at least for new functionality
2020-08-23 09:38:08 +02:00
Martin Diehl
5fb2d30ee4
fast and for arbitrary type
2020-08-23 09:02:17 +02:00
Martin Diehl
b731b1e768
Geom.to_vtk improvements
...
- should be integer
- should have a test
2020-08-23 08:49:49 +02:00
Philip Eisenlohr
2b09a7d31d
fixed Geom.canvas bug, added Geom.from_vtk, added mode,selection options to Geom.clean
2020-08-22 21:36:11 -04:00
Martin Diehl
bd4fb562bc
make use of inhereted dependencies
2020-08-22 20:57:42 +02:00
Philip Eisenlohr
499ce01748
added Geom.copy() method
2020-08-22 13:57:31 -04:00
Martin Diehl
34a08bd8b8
pip package is pillow, not PIL
2020-08-22 17:04:21 +02:00
Philip Eisenlohr
752d6f773b
corrected add_primitive test
2020-08-09 23:14:32 +02:00
Martin Diehl
ff7eed4477
(unified) type hints
2020-08-08 20:56:17 +02:00
Martin Diehl
0c6ce390b5
simple IO tests
...
can be improved ...
2020-08-08 20:35:50 +02:00
Martin Diehl
6a5471d243
have microstructure with 'to' and 'of'
2020-08-08 20:24:36 +02:00
Martin Diehl
55a620b378
migrating to library
2020-08-08 20:14:30 +02:00
Martin Diehl
a0e0f28e51
migrating shell scripts to library
2020-08-08 19:42:34 +02:00
Martin Diehl
5fcff876f9
replace selectively
...
useful for vicinity_offset and add_primitive
2020-08-08 18:41:47 +02:00
Martin Diehl
56eb57d253
homogenization will be removed soon, stop reporting it
2020-08-08 18:24:17 +02:00
Karo
7824a61f2e
Merge branch 'user_defined_add_calculation' into 'development'
...
User defined add calculation
See merge request damask/DAMASK!195
2020-08-06 00:53:16 +02:00
Philip Eisenlohr
ce00371f52
fixed rounding bug and updated reference images
2020-08-05 10:44:10 -04:00
Philip Eisenlohr
e4103564a9
16bit color index; proper rounding of index values
2020-08-05 10:08:48 -04:00
Martin Diehl
0aaba487d7
required packages
2020-08-05 06:20:05 +02:00
Martin Diehl
856dc22eab
Merge branch 'imageData-as-colormap.apply' of magit1.mpie.de:/damask/DAMASK into imageData-as-colormap.apply
2020-08-04 20:38:02 +02:00
Martin Diehl
7d49606597
restored correct bound calculation
...
test different bounds options
2020-08-04 20:34:40 +02:00
Philip Eisenlohr
e73ffd6da9
fixed and condensed lo,hi range assignment
2020-08-04 20:29:27 +02:00
Martin Diehl
e07c00a592
polishing + simple test
...
autoscaling seems to be broken
2020-08-04 20:14:04 +02:00
Philip Eisenlohr
84551c9d1e
integrated former imageData functionality as "shade" method
2020-08-04 13:05:30 -04:00
Martin Diehl
ae20f5ffe6
attempt to fix parallel writing on MacOS
...
should resolve TypeError: cannot pickle
'vtkmodules.vtkIOXML.vtkXMLRectilinearGridWriter' object error
2020-08-03 18:19:38 +02:00
Martin Diehl
3f2e63977d
not needed anymore
2020-07-31 19:46:44 +02:00
Martin Diehl
72ea9a5cec
non-vectorized formulas can be implemented in a user function
2020-07-31 19:42:44 +02:00
Martin Diehl
a9f53f4822
non-vectorized formulas can be implemented in a user functionc
2020-07-31 17:04:14 +02:00
Martin Diehl
50d7842dbe
more tests
2020-07-31 16:50:01 +02:00
Martin Diehl
aadce1e554
Merge branch 'development' into user_defined_add_calculation
2020-07-31 16:15:31 +02:00
Martin Diehl
daab5a8952
polishing
2020-07-24 22:42:16 +02:00
Martin Diehl
326b82b3aa
symmetric scatter around nominal value
2020-07-24 22:41:41 +02:00
Martin Diehl
4860f9c9ce
drop support for parallel marc versions
...
can still be handled by the user, but is a niche use case
2020-07-18 09:51:53 +02:00
Martin Diehl
2bbd68d964
with_suffix strips .1 from 2019.1
2020-07-16 09:33:17 +02:00
Martin Diehl
199ec51bf8
typo
2020-07-15 21:59:43 +02:00
Martin Diehl
9225d439ab
object oriented path handling
2020-07-15 21:58:24 +02:00
Martin Diehl
fa7f7e6fa4
don't complain if ssh without -X/-Y
2020-07-15 21:19:09 +02:00
Martin Diehl
333e840b09
standard behavior
...
most modules have an __version__ attribute
2020-07-15 20:57:56 +02:00
Martin Diehl
6259984e93
simplified
...
complicated, but allows to use functions as properties
2020-07-15 20:54:37 +02:00
Martin Diehl
b0e06f180a
reading numpy manual ...
...
https://numpy.org/doc/stable/reference/generated/numpy.isclose.html
rtol=1.e-8, b=1 gives atol+btol=1.e-8+1e-9, simplified to 1e-8
2020-07-13 22:48:29 +02:00
Francisco Jose Gallardo Basile
e1bbaac0d7
Merge branch 'Vectorize-Orientation' into 'development'
...
Vectorize orientation
See merge request damask/DAMASK!186
2020-07-03 12:22:04 +02:00
Martin Diehl
7b3d1204fa
easier to use
2020-07-03 07:29:31 +02:00
Philip Eisenlohr
d4f97f8346
Merge branch 'misc-improvements' into 'development'
...
Misc improvements
See merge request damask/DAMASK!184
2020-07-02 21:52:47 +02:00
Philip Eisenlohr
7b899f1ff1
fixed output number format width for single increment0
2020-07-02 11:33:09 -04:00
Philip Eisenlohr
81b3c10305
removed ambiguous variable "l"
2020-07-02 10:37:57 -04:00
Philip Eisenlohr
368a241931
added testing of __iadd__ and __invert__
2020-07-02 10:27:52 -04:00
Philip Eisenlohr
5a96708f41
added __iadd__ method
2020-07-02 10:26:04 -04:00
Philip Eisenlohr
f3ff2e7412
added __iadd__ method
2020-07-02 10:25:04 -04:00
Philip Eisenlohr
3b72d0ec72
added __invert__ method to reverse colormap
2020-07-02 10:13:47 -04:00
Martin Diehl
b88becb9d0
don't go out of focus during initialization
2020-07-02 08:25:35 +02:00
Martin Diehl
208d5109d4
still needed ...
2020-07-02 08:14:13 +02:00
Martin Diehl
86dc7054a4
still needed
2020-07-01 22:11:16 +02:00
Martin Diehl
4abd77fccf
more test coverage
2020-07-01 17:31:16 +02:00
Martin Diehl
be1eb996e0
more tests and cleaning
2020-07-01 15:12:34 +02:00
Martin Diehl
a7e3dd5a56
Merge branch 'development' into Vectorize-Orientation
2020-07-01 13:30:39 +02:00
Martin Diehl
e18a5b8a1b
simplifications + more tests
2020-07-01 08:57:28 +02:00
Martin Diehl
de8e9b5fc1
fast reduced operation
2020-07-01 00:37:02 +02:00
Martin Diehl
23365660d8
polishing
2020-06-30 23:18:32 +02:00
Martin Diehl
ef0c78745a
fix for vectorized in_SST + test
2020-06-30 23:05:41 +02:00
Martin Diehl
49d448dced
vectorized and cleaned
2020-06-30 21:43:57 +02:00
Martin Diehl
9a83b11a99
testing IPF color (vectorization)
2020-06-30 18:41:59 +02:00
Martin Diehl
bdb461a553
more flexible and independent
2020-06-30 18:12:39 +02:00
Martin Diehl
6e27a140f6
better split
2020-06-30 17:35:52 +02:00
Martin Diehl
3d6afff27a
clearer name
2020-06-30 17:30:29 +02:00
Martin Diehl
be21d1289d
using slicing method
2020-06-30 16:33:04 +02:00
Martin Diehl
c86e3e292c
WIP: cleaning namespace
2020-06-30 14:07:10 +02:00
Martin Diehl
9d94b521ad
polishing
2020-06-30 13:31:58 +02:00
Martin Diehl
ce7018164f
WIP: more reasonable naming
2020-06-30 13:05:06 +02:00
Martin Diehl
b8b34080fe
enable array like slicing/iteration
2020-06-30 12:16:47 +02:00
Martin Diehl
c8adfae0fa
bugfix: wrong variables used
2020-06-30 07:16:49 +02:00
Philip Eisenlohr
8dc87023d1
test from_range; update ASCII colormap labels (i_RGBA)
2020-06-29 22:23:24 -04:00
Philip Eisenlohr
decbe8074a
not using unassigned variable
2020-06-29 22:22:21 -04:00
Philip Eisenlohr
d3b3d628b2
PEP conformity...
2020-06-29 22:07:14 -04:00
Philip Eisenlohr
39aac76859
__add__, from_range, fixed missing np.array(colors), show peppered...
2020-06-29 22:04:03 -04:00
Philip Eisenlohr
97ca1b1a9b
try wxPython before tkinter, recent macOS otherwise fails
2020-06-29 22:02:12 -04:00
f.basile
d06daec4cb
reducec vectorized is improved
2020-06-29 18:25:45 +02:00
Martin Diehl
2d0c680daf
useful information
2020-06-29 07:30:42 +02:00
f.basile
4875191ffd
change if statement so github doesnt complain
2020-06-28 19:32:22 +02:00
Martin Diehl
a657125840
standard version string
2020-06-28 19:30:23 +02:00
f.basile
a99f016438
problem with if value is true / if value == True
2020-06-28 19:29:52 +02:00
Martin Diehl
c7eb56a63d
single precision reference files
2020-06-28 19:25:58 +02:00
Martin Diehl
37f7362cbe
Merge branch 'development' into misc-improvements
2020-06-28 19:23:17 +02:00
Martin Diehl
323f828606
Merge branch 'development' into modernize_colormap
2020-06-28 19:09:52 +02:00
f.basile
8484d2e6cc
fix github stuff
2020-06-28 19:05:10 +02:00
f.basile
352c4e95f1
more vectorized
2020-06-28 19:03:06 +02:00
Martin Diehl
1cfa6d44d9
dummy version could be useful for other tests
...
note that monkey patching requires direct access to damask.version in
the respective modules.
'from xx import yy' creates a copy (at least for the version string).
2020-06-28 11:51:30 +02:00
Martin Diehl
b3f5ee022a
unified style
2020-06-28 11:40:19 +02:00
Martin Diehl
e6a87da37c
compare to reference results
...
need to patch damask.version to be independent of version strings (in
json and ASCII table)
2020-06-28 11:20:09 +02:00
Martin Diehl
6a748d2edf
do not expand single strings into characters
2020-06-28 11:19:18 +02:00
Martin Diehl
ae4146f1c6
report version, write out 'modern' ASCII table style
2020-06-28 11:18:22 +02:00
Martin Diehl
e81b67e964
polishing
2020-06-28 10:32:59 +02:00
Martin Diehl
1c03bd157f
more testing
2020-06-28 10:25:28 +02:00
Martin Diehl
b78c809375
real output
2020-06-28 10:25:28 +02:00
Martin Diehl
3513754647
low/high instead of left/right
2020-06-28 10:25:28 +02:00
Martin Diehl
f4d13bc810
binary representation depends on vtk lib version
2020-06-28 10:07:31 +02:00
Martin Diehl
d965d66319
[skip ci] documenting
2020-06-28 09:34:10 +02:00
Martin Diehl
8a9a768a77
support pathlib.Path
2020-06-28 07:17:51 +02:00
Martin Diehl
8d5a72e936
more test, swich to pathlib
2020-06-27 23:38:58 +02:00
Martin Diehl
8c8132bcd7
coordinates should not have random names
2020-06-27 23:37:09 +02:00
Martin Diehl
c929af12c0
testing/polishing
2020-06-27 19:44:12 +02:00
Martin Diehl
cf63226721
testing all conversions
2020-06-27 18:55:27 +02:00
Martin Diehl
234699bd18
reverse should return DAMASK colormap
2020-06-27 16:25:10 +02:00
Martin Diehl
e779e190ea
new colormap class for use in python
...
- based on matplotlib "ListedColormap"
- constructors
- Array of RGB values (inherited),
- 'from_bounds': perceptual uniform colormap within given bounds
- 'from_predefined': from matplotlib or DAMASK templates
- export to files (WIP)
- preview on screen
2020-06-27 16:12:40 +02:00
Martin Diehl
1f9b5280cb
forgotten debug statement
2020-06-26 11:47:04 +02:00
Martin Diehl
a69f82e7c3
speed up vtk out
...
- limit to single precision
- write in background
2020-06-26 11:45:54 +02:00
Martin Diehl
bfae88a364
numpy compatible
2020-06-26 11:45:30 +02:00
Martin Diehl
bddb514072
more systematic reporting
2020-06-26 11:45:06 +02:00
Martin Diehl
27220a03bc
not invalid anymore
2020-06-25 09:23:43 +02:00
Martin Diehl
3290e2c585
handle even obscure directions
2020-06-25 08:29:36 +02:00
Martin Diehl
5d7213b062
restore reminder to document changes
...
causes conflicts with outdated tests and is not urgent: postpone until
release.
2020-06-25 08:19:07 +02:00
Martin Diehl
c9829f0f1f
only Chuck Norris can divide by zero
2020-06-25 08:18:39 +02:00
Martin Diehl
cd23937af5
Merge branch 'development' into f-strings
2020-06-25 07:46:24 +02:00
Philip Eisenlohr
e64d353865
condensed scale_to_coprime; added test of scale_to_coprime
2020-06-24 18:37:33 -04:00
Philip Eisenlohr
9999560247
easier understanding of from_ang data layout interpretation
2020-06-24 18:36:43 -04:00
Philip Eisenlohr
14d3b7e66d
more f-stringing
2020-06-24 16:59:55 -04:00
Philip Eisenlohr
966b6f8007
shapes init copes with integers instead of strict tuples; introduced f-strings
2020-06-24 14:18:06 -04:00
Philip Eisenlohr
f8f433e826
introduced f-strings
2020-06-24 14:13:56 -04:00
Philip Eisenlohr
ff858fd4c8
[skip ci] corrected help string for "srepr"
2020-06-24 20:13:09 +02:00
Philip Eisenlohr
4314ec1f37
[skip ci] started to replace .format() with f-strings
2020-06-24 11:02:37 -04:00
Anderson Wallace Paiva do Nascimento
3d93a5ff00
Merge branch 'migrate-to-pathlib' into 'development'
...
Migrate to pathlib
See merge request damask/DAMASK!177
2020-06-24 14:54:36 +02:00
Martin Diehl
6fa5ae6ebf
literature from Karo
2020-06-22 23:14:58 +02:00
Martin Diehl
e33895dd35
[skip ci] better logic
2020-06-21 10:37:09 +02:00
Martin Diehl
c6a5bb8a3b
is 2020
2020-06-21 10:04:45 +02:00
Martin Diehl
4c5939ef23
small polishing
2020-06-20 22:51:00 +02:00
Martin Diehl
15b43bcebf
from_directions is not general, removed
...
polishing
2020-06-20 19:57:49 +02:00
Martin Diehl
3f63a4fdbc
[skip ci] typo
2020-06-20 18:13:34 +02:00
Martin Diehl
4dae3643c9
vectorized IPF color working
...
results also uses the vectorized form.
Still needs careful checking
2020-06-20 17:15:13 +02:00
Martin Diehl
ebdb65d31f
standard broadcast_to behavior
2020-06-20 16:35:22 +02:00
Martin Diehl
262346ff5a
polishing
2020-06-20 16:34:19 +02:00
Martin Diehl
d93ed2bc5c
several improvements:
...
- vectorized from_directions
- more tests (96% coverage, only random functionality is untested)
- updated documentation, folloing numpy standard
- inverse operator '~' introduced
2020-06-20 12:20:43 +02:00
Martin Diehl
055fa64f5f
better readable
2020-06-19 12:25:46 +02:00
Martin Diehl
13bf7515ce
WIP (broken?): vectorized calculation of IPF color
2020-06-19 10:54:13 +02:00
Martin Diehl
1648963b57
vectorized equivalent orientation calculation
2020-06-18 22:53:04 +02:00
Martin Diehl
cdda556e18
small improvements
...
- hack for reporting multiple rotation
- bugfix for vectorized Rodrigues vector
- more general broadcasting (even more powerfull then np.broadcast_to)
2020-06-18 22:30:22 +02:00
Martin Diehl
fe5e5babfe
more useful for vectorized calculations
2020-06-18 22:29:28 +02:00
Martin Diehl
d0d9245707
clearer intention
2020-06-16 23:35:50 +02:00
Samad Vakili
0f42ff6b5d
reshaped F transpose error3
2020-06-10 14:02:52 +02:00
Samad Vakili
4f4d8d8c92
reshaped F transpose error2
2020-06-10 13:27:36 +02:00
Samad Vakili
7d7927e821
reshaped F transpose error
2020-06-10 13:22:57 +02:00
Samad Vakili
f3d59ddfe5
F reshaped error
2020-06-10 12:00:33 +02:00
Samad Vakili
36f04309b4
issue in test_mechanics
2020-06-09 21:33:13 +02:00
Samad Vakili
694b7ec3c5
mechanics done
2020-06-09 21:27:08 +02:00
Samad Vakili
d365cc9e12
typo
2020-06-09 14:39:17 +02:00
Samad Vakili
2978cf72f7
check for test_mechanics
2020-06-09 14:31:20 +02:00
Samad Vakili
824682d236
checked for typo
2020-06-09 14:26:22 +02:00
Samad Vakili
627e62439b
the single case is included in test file
2020-06-09 14:17:31 +02:00
f.basile
a76b5233be
fix pyflakes imported but unused in pytest 2
2020-06-05 13:54:38 +02:00
f.basile
54c20cdd3c
fix pyflakes imported but unused in pytest
2020-06-05 13:53:47 +02:00
f.basile
cb1779ef9a
fix pep257: D415 / First line should end with a period, question mark, or exclamation point (not e)
2020-06-05 13:49:30 +02:00
f.basile
eae9698d22
equivalent,related and inFZ vectorized + pytest
2020-06-05 13:48:12 +02:00
f.basile
ac09a2912a
fix python/damask/_orientation.py contains invalid python3 code 2
2020-06-04 16:45:44 +02:00
f.basile
6a24aee171
fix python/damask/_orientation.py contains invalid python3 code
2020-06-04 16:44:57 +02:00
f.basile
3897136f85
avoid python/damask/_orientation.py exceeds line length limit (maximum line length 141 > 132)
2020-06-04 16:43:28 +02:00
f.basile
0c41e33434
orientation.equivalent takes several rotations at the same time + small test"
...
"
""
2020-06-04 16:39:24 +02:00
Martin Diehl
a9c61ede69
bugfix: should also work if DAMASK_NUM_THREADS is not set
2020-06-03 20:24:18 +02:00
Martin Diehl
bda555fd1c
we are looking for a path, not for a file
2020-06-03 16:47:03 +02:00
Martin Diehl
bb5485927e
names like 2020.2 cannot be converted to int
2020-06-03 15:18:46 +02:00
Martin Diehl
5da1aa49bc
string should be a Path object
2020-06-03 15:17:00 +02:00
Martin Diehl
9b04a45bbd
bugfix (wrong variable name)
2020-06-03 13:53:00 +02:00
Martin Diehl
3be1a33820
easier to read
2020-06-03 13:32:47 +02:00
Martin Diehl
c67fbacfc7
higher test coverage
...
- invalid operations
- legacy output
2020-06-03 11:03:31 +02:00
Martin Diehl
c5d0c7e52e
easier to read, more flexible
2020-06-03 10:44:40 +02:00
Martin Diehl
ac9fddd9e9
Merge remote-tracking branch 'origin/development' into misc-improvements
2020-06-02 00:12:50 +02:00
Martin Diehl
a51cc39613
proper docstring
2020-06-01 22:13:01 +02:00
Martin Diehl
72a0b1fae5
testing and polishing
2020-06-01 11:33:22 +02:00
Martin Diehl
7a193639fb
also show datasets without unit
...
currently, this is only the orientation dataset
Also enable renames. Since this alters the history, the user need to
enable this
2020-05-31 23:50:06 +02:00
Martin Diehl
bcb0ce5e5e
typo
2020-05-31 18:51:12 +02:00
Martin Diehl
adb92de8cc
Merge branch 'development' into less-shell-scripts
2020-05-31 18:49:51 +02:00
Martin Diehl
421b8f4268
documented function interfaces
2020-05-30 17:31:50 +02:00
Martin Diehl
1afa00a19c
testing systematically all possibilities
2020-05-28 08:05:16 +02:00
Martin Diehl
865a505186
fix for logarithmic strain
2020-05-27 22:32:35 +02:00
Martin Diehl
00168a5939
testing 2-dim array of tensors
2020-05-27 21:07:48 +02:00
Martin Diehl
56afc03f3c
only vectorized version needed
...
use single point/simple versions only for testing
2020-05-27 18:05:08 +02:00
Martin Diehl
0fe450a033
Merge branch 'misc-improvements' into less-shell-scripts
2020-05-27 17:40:13 +02:00
Martin Diehl
31f72aa912
handle min/mid/max eigenvalues/vectors separately
...
storing as matrix/vector is not favorable for paraview and in many
cases, either min or max are of interest only
2020-05-27 17:39:46 +02:00
Samad Vakili
f9c33d9210
mechanics checked for an array with arbitrary dimensions
2020-05-26 16:27:27 +02:00
Martin Diehl
addc4c36d1
test for XDMF writer
...
just ensure that it does not throw an exception
2020-05-26 08:06:39 +02:00
Martin Diehl
520dfe216a
cleaning
2020-05-26 07:57:32 +02:00
Martin Diehl
908788271a
Merge branch 'misc-improvements' into less-shell-scripts
2020-05-26 07:24:03 +02:00
Martin Diehl
5ad7fe04d0
bugfix:
...
used wrong type
2020-05-26 07:15:27 +02:00
Martin Diehl
670e08468b
reorder
...
tests depend on other functionality that should be tested first
2020-05-26 06:49:29 +02:00
Martin Diehl
88c49fc4f4
also check values
2020-05-26 06:48:52 +02:00
Martin Diehl
7f09c90c7d
different h5py versions seem to throw different errors
2020-05-26 06:39:11 +02:00
Martin Diehl
6f7c7005b0
bugfix:
...
- proper overwrite
- no out of bounds error for empty time selection (just pick nothin)
2020-05-25 23:54:06 +02:00
Martin Diehl
9855c61747
store vtk file in tmp directory
2020-05-25 23:39:19 +02:00
Martin Diehl
9076fbe525
testing overwrite functionality
2020-05-25 23:05:31 +02:00
Martin Diehl
d6877da2b6
single source of truth
2020-05-25 20:15:45 +02:00
Martin Diehl
d9d089c359
avoid repetition and do correct encode/decode
2020-05-25 20:13:57 +02:00
Martin Diehl
5d0a2aac8f
polishing reporting
2020-05-25 20:13:57 +02:00
Martin Diehl
b9e16ea951
overwriting datasets makes sense in special cases
...
but prevent user from accidently doing that and store the information
2020-05-25 20:13:57 +02:00
Martin Diehl
248f199a7b
track creation time
2020-05-25 18:51:10 +02:00
Martin Diehl
b1b8d02320
typo
2020-05-25 16:41:23 +02:00
Martin Diehl
9d7158b51a
Merge branch 'misc-improvements' of magit1.mpie.de:/damask/DAMASK into misc-improvements
2020-05-25 16:40:23 +02:00
Martin Diehl
f07eaf19d0
fixed broadcasting + corresponding test
2020-05-25 16:37:08 +02:00
Martin Diehl
784d6d09d9
cleaning
2020-05-25 15:55:38 +02:00
Martin Diehl
dad7c7a2a0
Merge branch 'vectorize_rotation' into misc-improvements
2020-05-25 15:50:03 +02:00
Martin Diehl
3e2cbef780
Merge remote-tracking branch 'origin/development' into vectorize_rotation
2020-05-25 15:46:27 +02:00
Martin Diehl
77b68ab86f
using rotation class for rotations
2020-05-25 09:39:39 +02:00
Martin Diehl
39505507f1
not needed anymore
2020-05-25 08:07:12 +02:00
Martin Diehl
17aa3c00dc
more tests
2020-05-24 22:52:00 +02:00
Martin Diehl
296308e11e
fix for rotation around 90 deg
...
more tests
2020-05-24 20:52:19 +02:00
Martin Diehl
34adefd4ca
simplified
2020-05-24 18:30:45 +02:00
Samad Vakili
987c4a9e8d
first commit mechanics
2020-05-24 18:30:44 +02:00
Martin Diehl
594fcb2b72
seems more appropriate
2020-05-24 15:10:53 +02:00
Martin Diehl
3231a49107
centralize functionality
2020-05-24 09:39:58 +02:00
Martin Diehl
a26cba1457
calling a few missing statements
2020-05-24 09:06:11 +02:00
Martin Diehl
a3d9520c4b
polishing
2020-05-23 15:54:28 +02:00
Martin Diehl
82419f8649
testing selection
2020-05-23 10:38:25 +02:00
Martin Diehl
8a848979aa
missing test for IPF color
2020-05-23 09:13:45 +02:00
Martin Diehl
0549e33a00
vectorized/fast
2020-05-23 08:38:57 +02:00
Martin Diehl
e2cf527dfb
add missing test
2020-05-23 08:19:08 +02:00
Martin Diehl
b8e83cd263
do not overwrite
2020-05-22 20:42:13 +02:00
Martin Diehl
7bd681a5ed
very simple test
2020-05-22 19:04:02 +02:00
Martin Diehl
11eda510aa
testing functionality of Lattice separately
2020-05-22 18:45:27 +02:00
Martin Diehl
b33de48528
testing broadcasting
2020-05-22 15:12:37 +02:00
Martin Diehl
23b1381eaf
give credit
2020-05-21 11:30:25 +02:00
Martin Diehl
16f30a10d0
polishing
2020-05-20 23:50:08 +02:00
Martin Diehl
353fd3ceb6
more tests
...
now 95% test coverage of Rotation class
2020-05-20 19:16:31 +02:00