Philip Eisenlohr
b337575963
polished langauge of help messages
2021-09-08 13:10:49 -04:00
Test User
0c2956e0e1
[skip ci] updated version information after successful test of v3.0.0-alpha4-414-g0851b3101
2021-09-06 10:37:28 +02:00
Test User
b152b379c9
[skip ci] updated version information after successful test of v3.0.0-alpha4-412-ge98be8b1d
2021-09-06 08:52:13 +02:00
Test User
79e17bce4a
[skip ci] updated version information after successful test of v3.0.0-alpha4-409-g235e308c9
2021-09-05 19:18:55 +02:00
Test User
976b55a440
[skip ci] updated version information after successful test of v3.0.0-alpha4-406-gfc7b16655
2021-09-05 12:12:04 +02:00
Test User
8ee1f8e9fe
[skip ci] updated version information after successful test of v3.0.0-alpha4-401-g08dffb97b
2021-09-05 10:22:54 +02:00
Test User
4c50561aa1
[skip ci] updated version information after successful test of v3.0.0-alpha4-396-gd357a6931
2021-09-05 07:44:20 +02:00
Test User
63b9286b80
[skip ci] updated version information after successful test of v3.0.0-alpha4-394-gd1a1353b0
2021-09-02 21:11:04 +02:00
Test User
d52a084585
[skip ci] updated version information after successful test of v3.0.0-alpha4-392-gaf1e27379
2021-09-02 19:08:24 +02:00
Philip Eisenlohr
af1e27379b
Merge branch 'github-actions' into 'development'
...
Using GitHub actions for additional testing
See merge request damask/DAMASK!435
2021-09-02 15:32:45 +00:00
Test User
694c5e0bcc
[skip ci] updated version information after successful test of v3.0.0-alpha4-384-g4380c21d0
2021-09-02 15:52:00 +02:00
Martin Diehl
2b9d416734
fixes for old VTK and/or old numpy
2021-09-02 08:45:20 +02:00
Martin Diehl
68ac855f45
common help formulation
2021-09-01 22:33:04 +02:00
Martin Diehl
a6842abebf
give defaults
...
ODF etc seem to use degrees as default but mostly we use radians. Should
be discussed
2021-09-01 19:33:46 +02:00
Martin Diehl
a038c4bbac
shorter and 'standard'
2021-08-31 22:51:49 +02:00
Test User
3048a30b71
[skip ci] updated version information after successful test of v3.0.0-alpha4-373-g5764319c3
2021-08-31 19:57:17 +02:00
Philip Eisenlohr
5764319c34
Merge branch 'remove-test-class' into 'development'
...
Remove test class
See merge request damask/DAMASK!433
2021-08-31 16:22:36 +00:00
Martin Diehl
a809650a07
wrapper to subprocess.run
2021-08-31 07:12:53 +02:00
Test User
027b4f5261
[skip ci] updated version information after successful test of v3.0.0-alpha4-366-gaea93e802
2021-08-29 22:19:09 +02:00
Test User
5ceb47f9bc
[skip ci] updated version information after successful test of v3.0.0-alpha4-364-g0f6275ecc
2021-08-29 00:16:07 +02:00
Martin Diehl
e7530e0897
not needed anymore
2021-08-28 23:05:27 +02:00
Martin Diehl
a1bd633a9f
no need to reinvent the wheel
2021-08-28 17:49:44 +02:00
Test User
b96f1baf4e
[skip ci] updated version information after successful test of v3.0.0-alpha4-361-g3f9ee140f
2021-08-27 19:55:22 +02:00
Franz Roters
3f9ee140fd
Merge branch 'misc-improvements' into 'development'
...
a number of small changes
See merge request damask/DAMASK!428
2021-08-27 16:22:53 +00:00
Test User
3ba2ee6b41
[skip ci] updated version information after successful test of v3.0.0-alpha4-331-g69bafea02
2021-08-26 10:32:13 +02:00
Franz Roters
69bafea023
Merge remote-tracking branch 'origin/marc-solver-polish' into development
2021-08-26 08:59:02 +02:00
Philip Eisenlohr
ad707f543b
[skip ci] added quotes around second list value ("l")
2021-08-25 14:57:38 +00:00
Franz Roters
3be2fd81e9
added help on optimization levels
2021-08-25 16:10:39 +02:00
Philip Eisenlohr
f61296f5c5
added help to submit_job
2021-08-25 08:56:28 -04:00
Test User
e0c44d43b9
[skip ci] updated version information after successful test of v3.0.0-alpha4-326-g40a1d8fd0
2021-08-25 11:26:56 +02:00
Philip Eisenlohr
4055bf9199
shortened string and path assembly
2021-08-24 15:14:39 -04:00
Martin Diehl
129ff28692
Merge remote-tracking branch 'origin/master' into misc-improvements
2021-08-24 16:04:32 +02:00
Test User
03622c5d9d
[skip ci] updated version information after successful test of v3.0.0-alpha4-323-gcf8e9c262
2021-08-20 19:33:05 +02:00
Test User
d11c5ad9ad
[skip ci] updated version information after successful test of v3.0.0-alpha4-320-g13159caf4
2021-08-19 06:10:48 +02:00
Test User
f53747f8df
[skip ci] updated version information after successful test of v3.0.0-alpha4-315-gc4cdb046b
2021-08-19 06:10:08 +02:00
Test User
e0851abafe
[skip ci] updated version information after successful test of v3.0.0-alpha4-308-gb79fc5c09
2021-08-19 06:10:08 +02:00
Philip Eisenlohr
5dbb60d338
add_pole now has option "with_symmetry"
2021-08-19 06:10:08 +02:00
Philip Eisenlohr
728e50f79e
capture special case early instead of failing
2021-08-19 06:10:08 +02:00
Philip Eisenlohr
b754617c76
to_pole now blends; corrected help texts
2021-08-19 06:10:08 +02:00
Philip Eisenlohr
af6a99921f
removed incorrect parts of help
2021-08-19 06:10:08 +02:00
Martin Diehl
ab5f0d1bcd
no need for type conversion
2021-08-18 22:20:30 +02:00
Test User
7d506b5d99
[skip ci] updated version information after successful test of v3.0.0-alpha4-320-g13159caf4
2021-08-18 15:59:45 +02:00
Test User
64ba6da5fa
[skip ci] updated version information after successful test of v3.0.0-alpha4-315-gc4cdb046b
2021-08-18 11:02:01 +02:00
Martin Diehl
c5f284cd8d
increased test coverage
2021-08-18 10:44:04 +02:00
Martin Diehl
f76d64d355
already handled in NiceDumper class
2021-08-18 08:50:28 +02:00
Philip Eisenlohr
c4cdb046b8
Merge branch 'development' into harmonize-orientation
2021-08-16 17:48:07 -04:00
Martin Diehl
b13e7e174b
avoid invalid DADF5
2021-08-16 21:31:17 +02:00
Philip Eisenlohr
9b695fd3fe
add_pole now has option "with_symmetry"
2021-08-16 13:31:33 -04:00
Philip Eisenlohr
d2bd6e16ca
capture special case early instead of failing
2021-08-16 13:24:34 -04:00
Test User
5b63dc1e5e
[skip ci] updated version information after successful test of v3.0.0-alpha4-308-gb79fc5c09
2021-08-16 19:23:46 +02:00
Philip Eisenlohr
8759d82e87
to_pole now blends; corrected help texts
2021-08-16 13:23:31 -04:00
Philip Eisenlohr
077da6ca2a
removed incorrect parts of help
2021-08-16 13:19:10 -04:00
Martin Diehl
30d9f57db0
also compress string datasets
...
results in different type (numpy string instead of numpy object), tests need to be adjusted
2021-08-14 16:28:51 +02:00
Martin Diehl
595cc4e59e
always chunk data
...
for small datasets:
- only one chunk
- no compression
2021-08-14 15:48:07 +02:00
Test User
1d402a3d0c
[skip ci] updated version information after successful test of v3.0.0-alpha4-298-g01d545861
2021-08-11 16:04:17 +02:00
Test User
0651e242cf
[skip ci] updated version information after successful test of v3.0.0-alpha4-295-g4a0a7f3c0
2021-08-10 12:21:07 +02:00
Vitesh Shah
b29b0ecd71
Merge branch 'development' into report-systems
2021-08-10 09:16:13 +02:00
Test User
7f67ca243c
[skip ci] updated version information after successful test of v3.0.0-alpha4-276-gf75235f6a
2021-08-10 00:59:25 +02:00
Test User
f1aa4e9d2c
[skip ci] updated version information after successful test of v3.0.0-alpha4-268-g37ffd91f7
2021-08-09 16:27:11 +02:00
Philip Eisenlohr
5292f9b414
added crystal repr(); fixed typos; extended help
2021-08-08 17:56:54 -04:00
Martin Diehl
b1dab5f398
tests working now
2021-08-08 10:44:38 +02:00
Martin Diehl
4e0b3abeec
Merge branch 'orientation-polish' into restructure-Orientation-2
2021-08-08 10:19:53 +02:00
Martin Diehl
4e6663d258
Merge remote-tracking branch 'origin/development' into restructure-Orientation-2
2021-08-08 10:18:34 +02:00
Test User
be8e0dc86a
[skip ci] updated version information after successful test of v3.0.0-alpha4-235-g2635bb012
2021-08-05 23:39:34 +02:00
Martin Diehl
00a053c4c8
Merge remote-tracking branch 'origin/development' into initial-eigenstrain
2021-08-05 16:25:27 +02:00
Martin Diehl
5503592790
needs to be in constituents
2021-08-05 16:24:59 +02:00
Martin Diehl
b5be4c3fa5
compatible with material.yaml
2021-08-04 17:45:25 +02:00
Martin Diehl
bb5db3e79c
structured according to family
2021-08-04 16:17:29 +02:00
Martin Diehl
68eb930bf0
Merge remote-tracking branch 'origin/development' into report-systems
2021-08-03 21:57:50 +02:00
Test User
d8c03ad0d5
[skip ci] updated version information after successful test of v3.0.0-alpha4-221-g4a8c83611
2021-08-03 18:19:37 +02:00
Vitesh
4a8c836117
Merge branch 'store-sim-setup' into 'development'
...
store information on slip and twin systems
See merge request damask/DAMASK!422
2021-08-03 13:16:59 +00:00
Martin Diehl
e8312a49ed
polishing
2021-08-02 10:38:59 +02:00
Martin Diehl
83183408ea
can only decode strings, not arrays of strings
2021-07-31 10:20:48 +02:00
Test User
29155e325f
[skip ci] updated version information after successful test of v3.0.0-alpha4-205-g5d0c0f428
2021-07-29 12:58:11 +02:00
Martin Diehl
26ae352a4c
make setup data easily accessible to the user
2021-07-27 09:38:47 +02:00
Test User
04ab83a11f
[skip ci] updated version information after successful test of v3.0.0-alpha4-182-gac6d31b1f
2021-07-26 18:16:19 +02:00
Test User
ce4052a49d
[skip ci] updated version information after successful test of v3.0.0-alpha4-141-g18dbda784
2021-07-26 13:30:08 +02:00
Martin Diehl
29f3fcb4d8
Merge remote-tracking branch 'origin/development' into restructure-Orientation-2
2021-07-25 21:30:14 +02:00
Martin Diehl
e95157f039
unified behavior
...
extra dimensions (here: slip systems) are added to the left, inline with
.equivalent and .related
2021-07-25 20:32:24 +02:00
Martin Diehl
d1c3d767cc
documenting
2021-07-25 19:59:26 +02:00
Martin Diehl
aa215ff81e
generalization, now used for F_i
2021-07-24 19:30:15 +02:00
Test User
6c53615d11
[skip ci] updated version information after successful test of v3.0.0-alpha4-137-gb69b85754
2021-07-23 17:48:05 +02:00
Test User
2fff191421
[skip ci] updated version information after successful test of v3.0.0-alpha4-117-g9f2c37761
2021-07-21 14:56:53 +02:00
Test User
575c84ad86
[skip ci] updated version information after successful test of v3.0.0-alpha4-114-gb98819a36
2021-07-20 20:01:14 +02:00
Test User
fe3bc1f8ee
[skip ci] updated version information after successful test of v3.0.0-alpha4-112-gb36da7378
2021-07-19 20:13:53 +02:00
Martin Diehl
de428efca5
add_pole is working again
2021-07-18 18:58:05 +02:00
Martin Diehl
19ca99e033
matching name
2021-07-18 16:39:52 +02:00
Martin Diehl
86a60283c3
keep data close to where it is used
2021-07-18 16:34:42 +02:00
Martin Diehl
212a4ed63c
don't test implementation details
2021-07-18 15:57:51 +02:00
Martin Diehl
2217c3d143
unified help
2021-07-18 15:42:36 +02:00
Martin Diehl
e54f032f1e
Merge remote-tracking branch 'origin/development' into restructure-Orientation-2
2021-07-18 15:09:40 +02:00
Test User
e2b8145dc6
[skip ci] updated version information after successful test of v3.0.0-alpha4-94-g63fee141b
2021-07-16 16:52:41 +02:00
Martin Diehl
63fee141b9
rubbish
...
neper offers advanced seeding/meshing methods
2021-07-16 10:37:09 +02:00
Martin Diehl
f11e7742e5
better document
...
make damask.mpie.de colorful ;)
2021-07-16 10:30:33 +02:00
Test User
41fd7c9768
[skip ci] updated version information after successful test of v3.0.0-alpha4-89-gcc857c111
2021-07-15 17:08:49 +02:00
Test User
0f6fbe60b0
[skip ci] updated version information after successful test of v3.0.0-alpha4-87-gac4dcd195
2021-07-15 15:16:49 +02:00
Franz Roters
ac4dcd1952
Merge branch 'marc2021.2' into 'development'
...
support for MSC.Marc 2021.1 via patches
See merge request damask/DAMASK!411
2021-07-15 11:43:57 +00:00
Test User
899727138a
[skip ci] updated version information after successful test of v3.0.0-alpha4-72-g11fa1160e
2021-07-15 12:19:42 +02:00
Martin Diehl
766db0524f
Merge remote-tracking branch 'origin/Marc-start-material-at-0' into marc2021.2
2021-07-14 18:06:57 +02:00
Test User
10b75968f0
[skip ci] updated version information after successful test of v3.0.0-alpha4-65-gae3d844e4
2021-07-14 01:05:25 +02:00
Test User
3f8753ff6a
[skip ci] updated version information after successful test of v3.0.0-alpha4-59-g442759a09
2021-07-13 20:12:33 +02:00
Franz Roters
741f81455b
use newest Marc release (2021.2)
2021-07-13 16:43:23 +02:00
Martin Diehl
2826e61ea1
no need to split code over two files
2021-07-13 07:09:19 +02:00
Martin Diehl
abf7c8e9f1
limit search space to actual RVE
...
periodic copies of the seeds are sufficient, no need to copy the grid
2021-07-09 12:13:18 +02:00
Martin Diehl
3c22dd81ac
correct update frequency
2021-07-09 11:29:52 +02:00
Martin Diehl
92ca010b7c
Philip's corrections
2021-07-04 23:25:00 +02:00
Martin Diehl
58ec949941
Merge remote-tracking branch 'origin/development' into polishing-for-beta
2021-07-03 22:20:33 +02:00
Test User
75f76a9221
[skip ci] updated version information after successful test of v3.0.0-alpha4-10-g0ad4fd00b
2021-07-03 21:35:58 +02:00
Martin Diehl
9f7e2bdc0b
simplified
2021-07-02 07:48:01 +02:00
Martin Diehl
30fb257c40
help the user
2021-07-02 06:16:12 +02:00
Martin Diehl
b2b93f2780
not needed anymore
2021-07-01 19:36:00 +02:00
Test User
b46ac273c0
[skip ci] updated version information after successful test of v3.0.0-alpha4-1-gb567194fe
2021-07-01 15:53:44 +02:00
Martin Diehl
3f9d2c6c99
Merge remote-tracking branch 'origin/development' into preparing-alpha4-2
2021-06-30 17:55:51 +02:00
Martin Diehl
b9944bfc4e
preparing fourth 3.0 series alpha release
2021-06-30 12:44:24 +02:00
Test User
1050428e27
[skip ci] updated version information after successful test of v3.0.0-alpha3-302-gb69bae272
2021-06-29 17:44:24 +02:00
Martin Diehl
9dca7d8055
not needed
2021-06-29 10:44:13 +02:00
Test User
b9f273099d
[skip ci] updated version information after successful test of v3.0.0-alpha3-278-g23b9361bf
2021-06-24 08:24:27 +02:00
Martin Diehl
172b4fb5d1
Merge remote-tracking branch 'origin/development' into pyproject.toml
...
annoying conflicts to to change of type (symlink switch)
2021-06-22 22:48:50 +02:00
Martin Diehl
78b54517db
pip has problem with symlinked VERSION
...
https://github.com/pypa/pip/issues/3500
Not the nicest solution, but works and keeps single source of truth
2021-06-22 11:11:23 +02:00
Martin Diehl
abd660e62d
Merge remote-tracking branch 'origin/development' into polishing
2021-06-19 13:28:56 +02:00
Martin Diehl
56b011aa54
better have tests
2021-06-18 21:11:01 +02:00
Martin Diehl
32b5e4dece
update time estimate for long running processes
2021-06-18 18:14:52 +02:00
Philip Eisenlohr
0805445ea8
exchanged x/z dimension in XDMF writing
2021-06-18 10:17:39 -04:00
Martin Diehl
db1882e4de
polishing
2021-06-17 18:26:37 +02:00
Martin Diehl
f19dc27246
transition compatibility
2021-06-16 14:35:54 +02:00
Martin Diehl
01a32ea236
import from Neper
2021-06-15 22:29:28 +02:00
Martin Diehl
1bfbd30ae2
polishing
2021-06-15 19:53:05 +02:00
Martin Diehl
218e6a79a8
VTK image data is the appropriate type, not VTK rectilinear grid
...
FFTs require constant spacing in all three directions, this is
guaranteed by the vtkImageData but not by vtkRectilinearGrid
2021-06-15 19:02:26 +02:00
Martin Diehl
5202da13ea
better not have a "Lattice" object with "lattice" parameter
2021-06-07 21:49:04 +02:00
Martin Diehl
41e5f0c06c
re-introduced multiple inheritance
2021-06-06 22:25:42 +02:00
Martin Diehl
0722f4f754
disable if not possible
2021-06-03 11:22:28 +02:00
Martin Diehl
3c8d06b6f1
encapsulating all lattice(-family) related data
2021-06-03 11:18:00 +02:00
Martin Diehl
4701eea10f
decoupling Orientation and Lattice/LatticeFamily
2021-06-03 10:02:49 +02:00
Martin Diehl
03d3f362e6
equality checks
...
note: doing this type of comparison means:
- LatticeFamily('cubic') == Lattice('cF')
- Lattice('cF') != LatticeFamily('cubic')
we have the same behavior for comparison between Orientation and
Rotation
2021-06-03 09:38:43 +02:00
Martin Diehl
3b150ddbea
simplified/separated
2021-06-03 09:22:54 +02:00
Martin Diehl
87e94b6cf4
sorting
...
most functions require only lattice family, functions that require full
lattice details are at the end
2021-06-03 08:43:56 +02:00
Martin Diehl
302da1f76a
separating functionality
2021-06-02 17:11:37 +02:00
Martin Diehl
b55d51491d
separating functionality
2021-06-02 08:48:45 +02:00
Martin Diehl
e281d8384f
distinguish 'family' and 'lattice'
...
this requires the user to specify a keyword ('*' notation in __init__).
Since all 'from_xxx' methods anyway require a keyword, it does not
causes much more work (one explicit keyword in case of cube orientation
when using __init__ directly).
2021-06-01 21:51:28 +02:00
Martin Diehl
684016f3e3
utility function without connection to an object
2021-06-01 21:29:35 +02:00
Martin Diehl
6f9e521cdb
Merge branch 'HDFgeometryupdate' into 'development'
...
HDF geometry update
See merge request damask/DAMASK!395
2021-06-01 08:01:53 +00:00
Martin Diehl
bd10ee033e
dealing with user errors/incomplete files
2021-06-01 06:51:44 +02:00
Philip Eisenlohr
02256be8dc
Merge branch 'rotation-couple-kinematics' into 'development'
...
avoid static methods
See merge request damask/DAMASK!393
2021-05-31 15:55:36 +00:00
Francisco Jose Gallardo Basile
0ef5825d35
Merge branch 'Results.add_grid_filters' into 'development'
...
Result.add_xxx for functions on regular grids
See merge request damask/DAMASK!394
2021-05-31 05:46:06 +00:00
Martin Diehl
94b6be4e83
preferred way to say that something needs to be implemented
2021-05-29 10:54:34 +02:00
Martin Diehl
f435a1bea4
include in documentation
2021-05-28 21:06:02 +02:00
Martin Diehl
46dc6b4dab
functionality to add field data on regular grids
...
allows to add curl, divergence, and gradient to results from the grid
solver
2021-05-28 15:38:00 +02:00
Martin Diehl
e431d89957
polishing
2021-05-28 13:20:56 +02:00
Martin Diehl
dd4612dd9b
support singular names
...
e.g. self.iterate('phase')
2021-05-28 08:06:58 +02:00
Martin Diehl
89fc2f05cf
no need to attach static data
...
if needed, a 'kinematics' function that provides slip direction and
plane normal rotated according to the orientation would be helpful
2021-05-27 20:23:22 +02:00
Martin Diehl
bfc3fe410f
no direct connection to Orientation object
2021-05-27 19:10:23 +02:00
Martin Diehl
f7e1aad147
single source of truth
2021-05-27 18:44:20 +02:00
Martin Diehl
545a085c93
no need to hide, just add suffix to avoid clash with string argument
2021-05-27 18:41:42 +02:00
Martin Diehl
adb1e51e24
support for 2D tensor in load case
...
currently optional, but should become mandatory after a transition
period
2021-05-26 08:04:14 +02:00
Martin Diehl
0b80252d97
Merge remote-tracking branch 'origin/123_bccSlipSystem' into development
2021-05-22 22:40:33 +02:00
Sharan Roongta
fa3b077b72
Merge remote-tracking branch 'origin/development' into internal-restructure
2021-05-21 12:32:59 +02:00
f.basile
10c6070873
added {123} slips systems of bcc
2021-05-20 18:45:15 +02:00
Sharan Roongta
edb7834404
typo
2021-05-20 10:30:00 +02:00
Martin Diehl
2648464525
relax tolerances for quaternion initialization
...
we read in ASCII/YAML files, 1e-8 must be enough
2021-05-19 09:46:02 +02:00
Philip Eisenlohr
d6e69d5d4b
[skip ci] polishing of doc string
2021-05-10 14:44:58 -04:00
Martin Diehl
bc8a03b392
Merge branch 'python-polishing' into lattice-into-orientation
2021-05-07 22:04:25 +02:00
Martin Diehl
9c9286a4be
no connection to the class
2021-05-07 21:51:11 +02:00
Martin Diehl
cb8dbf6eda
simplified
2021-05-07 21:33:48 +02:00
Martin Diehl
a48fa5d797
better readable and documented
2021-05-07 20:07:59 +02:00
Martin Diehl
8626f6c047
hide imported modules in autocompletion
2021-05-06 15:00:03 +02:00
Martin Diehl
b1ad8197f2
object oriented approach
...
Orientation (of special lattice) should not have generic attributes
Also, import at the beginning of the file
2021-04-29 20:59:54 +02:00
Martin Diehl
b061b4911d
compatible with older scipy versions
2021-04-29 08:58:32 +02:00
Martin Diehl
3c41cd609f
Merge branch 'development' into env-reporting
2021-04-29 08:40:29 +02:00
Martin Diehl
00bc6a9031
4 threads as default. Reasonable for modern computers
...
hardcoded + and as shell variable
2021-04-28 20:26:25 +02:00
Martin Diehl
ff8ce3840b
handle infinite loop
2021-04-28 08:03:22 +02:00
Philip Eisenlohr
e9cfb2f968
Merge branch 'drop-old-DADF5-support' into 'development'
...
Improvements to damask.Result
See merge request damask/DAMASK!373
2021-04-27 00:33:41 +00:00
Philip Eisenlohr
ba938f1746
need to check for isinstance(int)
2021-04-26 17:56:15 -04:00
Philip Eisenlohr
5567512f73
removed unnecessary f-strings; added any -x to increments view
2021-04-26 14:26:16 -04:00
Philip Eisenlohr
b1bbe5528b
[skip ci] fixed mistake (R --> Q) in example
2021-04-26 17:09:11 +00:00
Franz Roters
55333f7e3e
Merge branch 'no-shell-variables' into 'development'
...
KISS: no shell variables
See merge request damask/DAMASK!370
2021-04-26 15:48:58 +00:00
Martin Diehl
de79d2d897
test handling of Marc results
2021-04-26 00:28:39 +02:00
Martin Diehl
62c987badf
add tracer to vtk files
2021-04-25 23:54:33 +02:00
Martin Diehl
68a839ed97
typo + improved help
2021-04-25 22:14:13 +02:00
Martin Diehl
d4a46b9be8
Merge remote-tracking branch 'origin/development' into drop-old-DADF5-support
2021-04-25 17:34:14 +02:00
Martin Diehl
0459f17f58
improved usability
2021-04-25 07:58:15 +02:00
Martin Diehl
18aa6f7f12
support for string arrays
...
allows to add phase label from mapping. Only scalar string arrays are
allowed (no real restriction)
2021-04-24 22:50:59 +02:00
Martin Diehl
6e1fe712c7
Merge branch 'python-documentation' into drop-old-DADF5-support
2021-04-24 19:39:28 +02:00
Philip Eisenlohr
690b478013
[skip ci] language polishing
2021-04-24 13:12:44 -04:00
Martin Diehl
24046ef683
support the user
2021-04-24 18:00:57 +02:00
Martin Diehl
95831e53f6
using improved documentation
2021-04-24 16:23:34 +02:00
Martin Diehl
3977e230b3
documenting and ensuring consistent argument names
...
'name' for a dataset matches the analogy to a file name
2021-04-24 14:47:45 +02:00
Martin Diehl
4d67c85a33
clarify out-of-place behavior and document return values
2021-04-23 23:32:09 +02:00
Martin Diehl
26f37d822d
state return value
...
not for Rotation as its docstring is extended by Orientation
2021-04-23 19:15:11 +02:00
Martin Diehl
6699f2ee5f
don't use shell variables
...
Marc solver can be controlled in python, installation can be tuned with
CLI arguments
2021-04-22 12:02:53 +02:00
Martin Diehl
3f8bd645d8
handle the case that MSC-related variables are not set
2021-04-22 07:55:41 +02:00
Martin Diehl
190ddafa44
don't support old file formats
2021-04-14 23:23:32 +02:00
Martin Diehl
0e6cb127df
damage can be defined in parts of the domain ...
2021-04-14 19:24:45 +02:00
Sharan Roongta
1be1a72a09
Merge branch 'Fortran-cleaning' into 'development'
...
Clarifying structure
See merge request damask/DAMASK!368
2021-04-13 11:08:18 +00:00
Martin Diehl
cfbb2d416f
better example
2021-04-10 23:58:53 +02:00
Martin Diehl
1133090b6c
logfile does not contain much valuable information
...
Marc automatically creates .out
2021-04-10 23:50:20 +02:00
Martin Diehl
37df78a8e0
don't show progress bar for empty iterations
2021-04-10 15:01:50 +02:00
Martin Diehl
d304654972
allow easy detection of empty view/get/place
2021-04-10 09:33:45 +02:00
Martin Diehl
07d573a56d
more helpful dataset descriptors
...
phase label for single phase material not helpful
2021-04-10 09:32:21 +02:00
Martin Diehl
44331c504b
__class__ is unknown (says prospector)
2021-04-10 08:29:42 +02:00
Martin Diehl
63b343ad87
Merge branch 'development' into allclose-rotation-orientation
2021-04-10 08:05:25 +02:00
Martin Diehl
e89236b14d
bugfix:
...
don't overwrite data when doing a 'place-like' operation to merge
datasets
2021-04-08 17:36:33 +02:00
Martin Diehl
2d8658822d
report return value
2021-04-08 14:58:22 +02:00
Martin Diehl
bc1454970c
mandatory symmetry
...
if symmetry is not of interest, damask.Rotation should be used
2021-04-06 22:49:08 +02:00
Philip Eisenlohr
bf2515c4c1
removed `Grid.diff` in lieu of `__eq__`
2021-04-06 12:10:35 -04:00
Philip Eisenlohr
bf4c88a39e
renamed result.read to get; polishing
2021-04-06 11:39:44 -04:00
Martin Diehl
02277fb820
consistently return masked array
2021-04-05 22:18:18 +02:00
Martin Diehl
d5806075d4
distinguish isclose/allclose and __eq__
2021-04-05 22:15:03 +02:00
Martin Diehl
115e3dd4c7
simplified
2021-04-05 17:18:12 +02:00
Martin Diehl
faa9e6aa6a
open file only once
2021-04-05 15:58:10 +02:00
Martin Diehl
c3a7a85f7a
avoid repetition
2021-04-05 15:41:28 +02:00
Martin Diehl
9db1ef9ed7
polishing
2021-04-05 13:41:49 +02:00
Martin Diehl
65b03aeb2d
Merge remote-tracking branch 'origin/development' into Results.read-.place
2021-04-05 10:22:49 +02:00
Martin Diehl
62c85db745
out of place behavior
2021-04-05 08:03:00 +02:00
Martin Diehl
fc409fcf08
'join' is always linear in time, '+' not
2021-04-04 22:12:28 +02:00
Martin Diehl
1d6b56346a
use 'view' and standardized calling signature
2021-04-04 20:56:30 +02:00
Martin Diehl
0e5f693fea
untangling
2021-04-04 19:44:06 +02:00
Martin Diehl
e1d57f176d
simplifying
...
[] has a special meaning for glob, use () to indicate direction for IPF
color. It is anyways the sample direction, not a crystallographic
direction
2021-04-04 19:05:58 +02:00
Martin Diehl
d78e0085fc
simplified
2021-04-04 18:32:17 +02:00
Martin Diehl
a962777d24
avoid code duplication
2021-04-04 13:38:40 +02:00
Martin Diehl
6fef46539e
standard names
2021-04-04 13:16:14 +02:00
Martin Diehl
6f3dc80079
simplified/using new functionality
2021-04-03 16:32:48 +02:00
Martin Diehl
27f2e3b26e
avoid random order when using sets
2021-04-03 12:21:06 +02:00
Martin Diehl
885aeb62e5
geometry0 itself is useful
...
can be combined with 'place' if in-memory VTK is required for spatial
operations
2021-04-03 08:58:22 +02:00
Martin Diehl
39c0bc9de6
polishing
2021-04-03 08:19:16 +02:00
Martin Diehl
20d0242d59
using new logic
2021-04-02 12:21:27 +02:00
Martin Diehl
e8ff509502
output all datasets per default
...
respect 'field' selection
2021-04-02 11:29:58 +02:00
Martin Diehl
18afa217fe
easier to understand
...
limit to same fields for homogenization and fields results in a little
less flexibility (requires two views) but should be acceptable for such
a little used feature
2021-04-02 08:24:49 +02:00
Martin Diehl
cf1ce6a1fe
support for masked array
...
masked arrays are the outcome of Result.place
2021-04-02 08:07:22 +02:00
Martin Diehl
58ac99831c
polishing
2021-04-02 07:47:03 +02:00
Martin Diehl
9459fea929
support for pandas not planned any more
...
damask.Table supports multidimensional data, numpy.ma supports masked
arrays
2021-04-02 07:42:54 +02:00
Philip Eisenlohr
f6d6aefe1d
function renaming; rewording of help messages
2021-04-01 18:41:28 -04:00
Martin Diehl
84e117c6b3
polished and added tests
2021-04-01 17:26:51 +02:00
Martin Diehl
71d1a341e4
simplified
2021-04-01 15:08:48 +02:00
Martin Diehl
2397df88f9
documenting
2021-04-01 07:21:34 +02:00
Martin Diehl
c1f7ea750b
legacy access not needed anymore
2021-04-01 06:55:47 +02:00
Martin Diehl
8a3af87e3e
Merge remote-tracking branch 'origin/development' into spring-cleaning
2021-04-01 00:09:51 +02:00
Philip Eisenlohr
07c9cf5f1a
- improved reporting and slicing of table.
...
- implemented numpy-like `allclose` and `isclose`
2021-03-31 18:30:07 +00:00
Martin Diehl
8a8a28adc4
support multi-constituents
2021-03-31 20:02:25 +02:00
Martin Diehl
be444b69ca
include homogenization
2021-03-31 15:44:27 +02:00
Martin Diehl
97e6c397d9
cleaned
2021-03-31 15:10:39 +02:00
Martin Diehl
7b678af1b4
float and int are different
2021-03-31 12:40:53 +02:00
Martin Diehl
8c7ee5e796
simplified
2021-03-31 12:05:51 +02:00
Martin Diehl
e9c65dee73
documenting and testing
2021-03-31 10:59:21 +02:00
Martin Diehl
7b846efe4a
arguments can be int, bool, str
2021-03-31 08:12:57 +02:00
Martin Diehl
eebb050a64
simplified
...
place seems to work
2021-03-31 07:56:42 +02:00
Martin Diehl
60119c1300
return minimal unique dictionaries per default
2021-03-30 21:39:14 +02:00
Martin Diehl
989992004d
cleaning dicts
2021-03-30 19:41:36 +02:00
Martin Diehl
7865092b82
not needed
2021-03-30 17:24:19 +02:00
Martin Diehl
b9b66fac45
simplified
2021-03-30 17:15:02 +02:00
Martin Diehl
b19ec4f8ae
first ideas for more user friendly usage
2021-03-30 07:24:47 +02:00
Martin Diehl
3fe1accf18
not used anymore
2021-03-28 19:48:44 +02:00
Martin Diehl
5ea2fa97a0
untested and unused code
2021-03-28 12:46:26 +02:00
Martin Diehl
a587e70704
split into small sections and test damage
2021-03-28 12:08:08 +02:00
Martin Diehl
a3ab890315
bugfix for ConfigMaterial
...
don't use mutable variables in python initializers, they get updated
2021-03-28 11:35:40 +02:00
Martin Diehl
480b8315a7
cleaning + testing
2021-03-27 15:54:29 +01:00
Martin Diehl
8a99306aed
old table not needed anymore
2021-03-27 14:34:18 +01:00
Martin Diehl
c742f7c9d0
need to cope with _asciitable.py and _test.py
2021-03-27 12:47:58 +01:00
Martin Diehl
be9e00347b
cleaning
...
dropped support for legacy table
2021-03-27 10:11:31 +01:00
Martin Diehl
111a1a76c6
cleaning
2021-03-27 07:35:49 +01:00
Martin Diehl
9fd244d8a0
cleaning
2021-03-26 20:59:49 +01:00
Martin Diehl
3e8bcd3225
cleaning examples, using consistent names
...
- examples in repository should only show the most basic steps
- MSC.Marc, marc => Marc
2021-03-26 09:27:49 +01:00
Martin Diehl
a72e2db678
Merge branch 'development' into output-rename
2021-03-25 21:03:20 +01:00
Philip Eisenlohr
3d4590a522
Merge branch 'citation-style' into development
2021-03-25 14:39:44 -04:00
Philip Eisenlohr
0e57135239
[skip ci] dx.doi.org --> doi.org
2021-03-25 14:33:08 -04:00
Martin Diehl
3b392281e4
consistent naming in HDF5 output
2021-03-25 19:22:59 +01:00
Martin Diehl
fe0cd8e5e2
transparently handle orientations/rotations
2021-03-25 15:30:31 +01:00
Martin Diehl
1ff6a09746
tests/specifications
2021-03-23 18:51:21 +01:00
Martin Diehl
572c3204d0
let the computer do the work
2021-03-23 14:28:56 +01:00
Martin Diehl
e0e088eaa8
EBSD dataset for testing
...
use only non-segmented data. Automatically fall back to numeric phase
names if cell_ensemble_data is not found
2021-03-23 13:42:04 +01:00
Martin Diehl
549b849730
better readable
2021-03-23 12:05:08 +01:00
Martin Diehl
926b5c657d
material_add can do expansion
2021-03-23 12:01:35 +01:00
Vitesh Shah
005fde2504
homogenization in material was missing
2021-03-23 11:48:35 +01:00
Martin Diehl
7012099d0c
substituted broken link
2021-03-20 14:34:14 +01:00
Martin Diehl
1c3d1ee0f2
documented
2021-03-20 13:37:06 +01:00
Martin Diehl
394fda5f37
improving import from DREAM.3D
...
- no duplicated entries even for non-segmented data
- using phase labels from file
- material.yaml: Dummy homogenization and phase
- tests to ensure correct order and match between Grid and
ConfigMaterial
2021-03-20 12:56:18 +01:00
Martin Diehl
cdcedd0d44
autodetect base group
2021-03-20 07:26:07 +01:00
Sharan Roongta
fc172921fb
unified citation style continued
2021-03-19 10:41:47 +01:00
Martin Diehl
07d79ef4ba
unifying style
2021-03-17 11:25:21 +01:00
Martin Diehl
ec28fd8a73
polishing
2021-03-12 09:23:05 +01:00
Martin Diehl
3b27c64709
Merge remote-tracking branch 'origin/development' into config_from_dream3D
2021-03-12 08:11:54 +01:00
Philip Eisenlohr
e2d4ab427e
explicit path joining with "/" in _result; updated cpTi CRSS
2021-03-09 22:02:49 -05:00
Philip Eisenlohr
a26e586b14
More general 'delete' (accepts iterables) and backports of '|' and '|=' for union/add.
...
'|=' would work for python 3.9 without extra code, but '|' unfortunately casts 'damask.Config' (subclass of 'dict') to a 'dict'.
2021-03-09 19:15:15 +00:00
Philip Eisenlohr
4208c4e713
adapted to Table.add being out-of-place
2021-03-08 11:04:49 -05:00
Philip Eisenlohr
7cbc69a4ca
added "Returns" to help
2021-03-08 11:02:27 -05:00
Philip Eisenlohr
109ad378c2
corrected help text of as_Rodrigues_vector
2021-03-02 16:26:18 +01:00
Franz Roters
7b89cb41f9
Merge branch 'dislotwin-correction' into 'development'
...
dislotwin-correction
See merge request damask/DAMASK!347
2021-02-28 19:45:34 +00:00
Philip Eisenlohr
464c62e7e7
abandoned integer aliases for projection directions
2021-02-28 12:47:13 +01:00
Philip Eisenlohr
175d724ded
added keepdims=False option to project_stereographic
2021-02-27 18:38:40 -05:00
Philip Eisenlohr
ea763fd941
generalized stereographic projection to cope with all three directions (x,y,Z)
2021-02-27 11:15:01 -05:00
Martin Diehl
bf223e8e00
helpful reporting in case of errors
2021-02-26 06:35:42 +01:00
Philip Eisenlohr
1d62341811
Fixed missing second-to-last entry in representation list. Polished help texts.
2021-02-26 03:20:28 +01:00
Philip Eisenlohr
2dea705fa9
polishing/shortening
2021-02-23 19:01:10 -05:00
Philip Eisenlohr
0b08b3d233
expanded help texts
2021-02-23 18:54:55 -05:00
Philip Eisenlohr
dcc42204ec
expanded help on material_add
2021-02-23 18:40:32 -05:00
Philip Eisenlohr
69316f186b
fixed ConfigMaterial.from_table; 2D grid.from_table now acceptable
2021-02-23 11:50:13 -05:00
Philip Eisenlohr
4a00254dba
shortened material_add and allow for multi-constituent; broken from_table...
2021-02-22 22:47:08 -05:00
Martin Diehl
0461c404f7
numpy uses __array__ for casting
...
avoids infinite loop of __init__, __getitem__, and shape. Found on
8cf07f6113
2021-02-22 18:52:06 +01:00
Martin Diehl
5517be5078
warn the caller of deprecated functions
2021-02-22 08:49:44 +01:00
Martin Diehl
67f0ab2ce8
silence deprecation warning
2021-02-22 08:46:28 +01:00
Martin Diehl
b00b4bb0ad
more general handling of precision
...
Anaconda on windows does not have np.float128 defined, but aliases
should work
https://numpy.org/devdocs/user/basics.types.html
2021-02-19 17:03:41 +01:00
Martin Diehl
f5f993435b
make intention clear
2021-02-19 16:34:28 +01:00
Martin Diehl
ab9661d951
don't see how ':=' should help here
2021-02-19 07:04:34 +01:00
Philip Eisenlohr
002cfbd085
Merge branch 'account-for-floating-point-precision-in-orientation' into 'development'
...
ensures that at least one orientation in the FZ is found
See merge request damask/DAMASK!337
2021-02-15 20:53:37 +00:00
Philip Eisenlohr
89e8ca4535
renamed and shortened _separate_arguments()
2021-02-15 11:22:42 -05:00
Sharan Roongta
099cd90890
Merge remote-tracking branch 'origin/development' into python-improvements
2021-02-13 16:51:29 +01:00
Martin Diehl
fe63adcca4
mimic python error message and ensure that error is raised
2021-02-12 18:20:39 +01:00
Sharan Roongta
9e8a243d6f
avoid name conflict with lattice parameter 'c'
2021-02-12 12:15:08 +01:00
Sharan Roongta
f1b8978e21
accept variables that will be used
...
**kwargs allowed the use of extraneous arguments
2021-02-12 11:24:12 +01:00
Martin Diehl
958936c449
Merge branch 'development' into polishing-for-release
2021-02-11 21:59:59 +01:00
Martin Diehl
e8fae6b2a7
simplified
2021-02-11 21:56:53 +01:00
Martin Diehl
4e31862f0f
avoid repetition
2021-02-10 18:35:13 +01:00
Martin Diehl
6895ef6b18
always write LF line endings
...
small pitfall: I windows users use a filehandle that results from a call
to open() without the newline option, they get still CRLF line endings
2021-02-10 10:03:35 +01:00
Martin Diehl
4bcbcb34d0
ensures that at least one orientation in the FZ is found
2021-02-09 23:58:00 +01:00
Martin Diehl
869307c5ec
temperature not needed for pure mechanics
...
would also require to define thermal homogenization
2021-02-08 22:56:37 +01:00
Sharan Roongta
14ce127dc4
fraction --> v
2021-02-04 13:46:01 +01:00
Martin Diehl
051e3ed0ae
not needed anymore
2021-02-02 12:26:08 +01:00
Martin Diehl
0f6094890a
simplified
...
damask.environment does not offer any advantage over os.environ for
variables. After 'root_dir' was removed, the whole module became
obsolete
2021-01-15 12:14:05 +01:00
Martin Diehl
37de561938
shell variables are more robust
...
they will also work if Fortran and python code are installed in
different locations.
2021-01-13 18:53:16 +01:00
Martin Diehl
d76543f759
better name
2021-01-13 14:57:58 +01:00
Martin Diehl
a7d998dd48
standard name
2021-01-13 14:53:50 +01:00
Martin Diehl
4c35da8627
simplified
2021-01-13 11:33:28 +01:00
Martin Diehl
196902948f
simplified
2021-01-13 09:54:04 +01:00
Martin Diehl
f4247e0f35
simpler (and scipy compatible)
2021-01-13 09:35:42 +01:00
Philip Eisenlohr
2d6e6a2370
Rotation composition uses "*"; application of Rotation to object uses "@"; "apply()" works on both
2021-01-12 18:57:33 -05:00
Vitesh Shah
c3c4b05c01
handling point based data enabled
2021-01-12 13:01:11 +01:00
Vitesh Shah
6bffb91951
Added example
2021-01-11 15:16:46 +01:00
Vitesh Shah
6c367ec010
conform to docstring conventions
2021-01-11 15:05:48 +01:00
Vitesh Shah
2951617e28
able to take phaseID into account
2021-01-11 15:02:15 +01:00
Vitesh Shah
dbab3c3a83
dream3D has an extra row at start for grain based data
2021-01-11 14:21:56 +01:00
Vitesh Shah
028d47034d
conversion from dream3D for single phase materials
2021-01-11 13:31:08 +01:00
Philip Eisenlohr
bde66d85fc
Merge branch 'development' into python-improvements
2021-01-07 10:58:33 -05:00
Philip Eisenlohr
94cfe28128
polishing help; Rotation.apply(Rotation) now acceptable.
2021-01-06 18:03:10 -05:00
Martin Diehl
acbb564afc
restored functionalitity for adding list.
...
got accidently lost
2021-01-04 07:23:14 +01:00
Martin Diehl
d8b4b7e0f5
!= and == work componentwise
2021-01-03 21:52:19 +01:00
Martin Diehl
f48a446353
compatible with scipy.spatial.transform.Rotation
...
also introduced inplace variants and '/' as multiplicative inverse of
'*'
2021-01-03 16:08:22 +01:00
Martin Diehl
98723cb0ed
need to handle special case of Re() = 0
...
ensuring that the real part is positive seems to be a good idea on first
sight, but it would be easier to simply acknowledge that qu = -qu
2021-01-03 15:50:15 +01:00
Martin Diehl
80b8693a66
avoid adding to existing data, i.e. when reading a file
2021-01-03 12:10:39 +01:00
Martin Diehl
5f1399acc3
consistent behavior with other classes
...
python dictionary operates in-place, so wrappers for out-of-place
behavior let it use like the other DAMASK classes
2021-01-03 12:09:21 +01:00
Martin Diehl
9a278daa3f
copy not needed
...
YAML writer does not write out references anymore
2021-01-03 12:07:02 +01:00
Martin Diehl
35ca1ffb0a
consistent copy functionality
2021-01-03 12:03:40 +01:00
Martin Diehl
6fe1ff8e39
fixed test for rodrigues parametrization
...
for angle close to 180deg, the sign of the axis does not matter
2021-01-03 11:50:45 +01:00
Philip Eisenlohr
da62daf15d
added test for appending rotation lists; better check for type==list
2020-12-28 12:26:09 -05:00
Philip Eisenlohr
4796afdd92
fix for broken representation of no-rotation orientations and averaging weights
2020-12-28 12:10:21 -05:00
Philip Eisenlohr
d8b57680ec
raise NotImplemented when using R*b instead of R@b
2020-12-21 15:47:18 -05:00
Sharan Roongta
6cc78cb41e
Merge branch 'misc-improvements' into 'development'
...
Misc improvements
See merge request damask/DAMASK!302
2020-12-18 15:19:04 +01:00
Martin Diehl
35f9861818
Fortran standard is 2018
...
will not work for older compilers
2020-12-18 15:19:04 +01:00
Martin Diehl
5fb0e4908b
Examples reflect actual behavior
2020-12-18 07:09:05 +01:00
Philip Eisenlohr
403ac693da
need to pass init argument to dict superclass
2020-12-17 18:08:55 -05:00
Philip Eisenlohr
e11be7e600
preinitialize a ConfigMaterial object with 'constituents','homogenization','phase' keys
2020-12-17 10:49:33 -05:00
Martin Diehl
2dd520b4a2
P_aim should be independent from P_av
...
P_av is not defined after restart or cutback. Restart with change of
load case is probably still an issue
2020-12-15 08:06:50 +01:00