Commit Graph

1018 Commits

Author SHA1 Message Date
Martin Diehl 9a2ac31545 explicit is better then implicit 2020-08-24 23:35:46 +02:00
Martin Diehl 0ceba2a6d3 use central functionality 2020-08-24 23:28:26 +02:00
Martin Diehl 71e08ea66a small fixes:
- numpy has multiple float variants
- start renaming microstructure -> materialpoint where it does not hurt
- no need for type check if comparing against set of valid directions
  (or I miss some corner cases)
2020-08-24 23:23:47 +02:00
Philip Eisenlohr 2560f014a3 Merge remote-tracking branch 'origin/increase-geom-test-coverage' into geom-out-of-place 2020-08-24 17:17:31 -04:00
Martin Diehl 55443a3ff5 reflect change of variable names in file layout version 2020-08-24 22:54:09 +02:00
Martin Diehl 279d43ccc6 include version info + date in comments (Table class) 2020-08-24 19:04:59 +02:00
Martin Diehl 9d505c8518 better readable
- more explicit reporting
- always relative import for DAMASK
2020-08-24 09:58:24 +02:00
Martin Diehl 0d3ef29554 more logical encapsulation
- getting data out of VTK is a functionality of the VTK class. Need to
  discuss whether the VTK class should also provide grid and size (works
  only for rectilinear grid, so hiding VTK type is not possible
  anymore), but the current situation requires the Geom class to rely on
  'internals' of the VTK class
- header is specific to *.geom format, not to Geom objects.
2020-08-24 06:46:22 +02:00
Martin Diehl 507a165733 functionality for getting data
- handy for Geom class, but could be of general interest
- add/set/get comments: follows same functions as for Geom class
2020-08-24 06:40:36 +02:00
Philip Eisenlohr 446ac03b07 All geom methods are now out-of-place, i.e. return an updated duplicate (to allow for daisy chaining).
* Added comments when methods acted.
* Added diff method
* Added flip method
* Fixed add_primitive inversion bug (again...)
* Fixed cell centering bug in add_primitive

* Added missing tests
2020-08-23 19:43:46 -04:00
Martin Diehl 44015082a3 dead code (copy and paste error) 2020-08-24 00:34:07 +02:00
Martin Diehl 9867830d68 store history of geometry modifications 2020-08-23 23:52:48 +02:00
Martin Diehl a1c78b778a WIP: track history in VTK objects 2020-08-23 23:22:53 +02:00
Martin Diehl 7b50a3b364 material.config is not used anymore 2020-08-23 15:20:11 +02:00
Martin Diehl d65371d42f removed unused and untested functionality
PEP 20: Explicit is better than implicit.
2020-08-23 12:55:55 +02:00
Martin Diehl 6f79573140 more test coverage 2020-08-23 11:05:56 +02:00
Martin Diehl 07af7b2f98 geom is written to vtr exlcusively, not to general vtk
base tests on vtr
2020-08-23 10:50:15 +02:00
Martin Diehl 64e7582e8e consistent interface to ndimage filters
Boolean 'periodic' sets mode to 'wrap' or 'nearest'
2020-08-23 10:02:22 +02:00
Martin Diehl 975db01f31 microstructure -> materialpoint
at least for new functionality
2020-08-23 09:38:08 +02:00
Martin Diehl 5fb2d30ee4 fast and for arbitrary type 2020-08-23 09:02:17 +02:00
Martin Diehl b731b1e768 Geom.to_vtk improvements
- should be integer
- should have a test
2020-08-23 08:49:49 +02:00
Philip Eisenlohr 2b09a7d31d fixed Geom.canvas bug, added Geom.from_vtk, added mode,selection options to Geom.clean 2020-08-22 21:36:11 -04:00
Philip Eisenlohr 499ce01748 added Geom.copy() method 2020-08-22 13:57:31 -04:00
Martin Diehl ff7eed4477 (unified) type hints 2020-08-08 20:56:17 +02:00
Martin Diehl 55a620b378 migrating to library 2020-08-08 20:14:30 +02:00
Martin Diehl a0e0f28e51 migrating shell scripts to library 2020-08-08 19:42:34 +02:00
Martin Diehl 5fcff876f9 replace selectively
useful for vicinity_offset and add_primitive
2020-08-08 18:41:47 +02:00
Martin Diehl 56eb57d253 homogenization will be removed soon, stop reporting it 2020-08-08 18:24:17 +02:00
Karo 7824a61f2e Merge branch 'user_defined_add_calculation' into 'development'
User defined add calculation

See merge request damask/DAMASK!195
2020-08-06 00:53:16 +02:00
Philip Eisenlohr ce00371f52 fixed rounding bug and updated reference images 2020-08-05 10:44:10 -04:00
Philip Eisenlohr e4103564a9 16bit color index; proper rounding of index values 2020-08-05 10:08:48 -04:00
Philip Eisenlohr e73ffd6da9 fixed and condensed lo,hi range assignment 2020-08-04 20:29:27 +02:00
Martin Diehl e07c00a592 polishing + simple test
autoscaling seems to be broken
2020-08-04 20:14:04 +02:00
Philip Eisenlohr 84551c9d1e integrated former imageData functionality as "shade" method 2020-08-04 13:05:30 -04:00
Martin Diehl ae20f5ffe6 attempt to fix parallel writing on MacOS
should resolve TypeError: cannot pickle
'vtkmodules.vtkIOXML.vtkXMLRectilinearGridWriter' object error
2020-08-03 18:19:38 +02:00
Martin Diehl a9f53f4822 non-vectorized formulas can be implemented in a user functionc 2020-07-31 17:04:14 +02:00
Martin Diehl 50d7842dbe more tests 2020-07-31 16:50:01 +02:00
Martin Diehl aadce1e554 Merge branch 'development' into user_defined_add_calculation 2020-07-31 16:15:31 +02:00
Martin Diehl 4860f9c9ce drop support for parallel marc versions
can still be handled by the user, but is a niche use case
2020-07-18 09:51:53 +02:00
Martin Diehl 2bbd68d964 with_suffix strips .1 from 2019.1 2020-07-16 09:33:17 +02:00
Martin Diehl 199ec51bf8 typo 2020-07-15 21:59:43 +02:00
Martin Diehl 9225d439ab object oriented path handling 2020-07-15 21:58:24 +02:00
Martin Diehl fa7f7e6fa4 don't complain if ssh without -X/-Y 2020-07-15 21:19:09 +02:00
Martin Diehl 333e840b09 standard behavior
most modules have an __version__ attribute
2020-07-15 20:57:56 +02:00
Martin Diehl 6259984e93 simplified
complicated, but allows to use functions as properties
2020-07-15 20:54:37 +02:00
Martin Diehl b0e06f180a reading numpy manual ...
https://numpy.org/doc/stable/reference/generated/numpy.isclose.html
rtol=1.e-8, b=1 gives atol+btol=1.e-8+1e-9, simplified to 1e-8
2020-07-13 22:48:29 +02:00
Francisco Jose Gallardo Basile e1bbaac0d7 Merge branch 'Vectorize-Orientation' into 'development'
Vectorize orientation

See merge request damask/DAMASK!186
2020-07-03 12:22:04 +02:00
Martin Diehl 7b3d1204fa easier to use 2020-07-03 07:29:31 +02:00
Philip Eisenlohr d4f97f8346 Merge branch 'misc-improvements' into 'development'
Misc improvements

See merge request damask/DAMASK!184
2020-07-02 21:52:47 +02:00
Philip Eisenlohr 7b899f1ff1 fixed output number format width for single increment0 2020-07-02 11:33:09 -04:00
Philip Eisenlohr 5a96708f41 added __iadd__ method 2020-07-02 10:26:04 -04:00
Philip Eisenlohr f3ff2e7412 added __iadd__ method 2020-07-02 10:25:04 -04:00
Philip Eisenlohr 3b72d0ec72 added __invert__ method to reverse colormap 2020-07-02 10:13:47 -04:00
Martin Diehl b88becb9d0 don't go out of focus during initialization 2020-07-02 08:25:35 +02:00
Martin Diehl 208d5109d4 still needed ... 2020-07-02 08:14:13 +02:00
Martin Diehl 86dc7054a4 still needed 2020-07-01 22:11:16 +02:00
Martin Diehl 4abd77fccf more test coverage 2020-07-01 17:31:16 +02:00
Martin Diehl be1eb996e0 more tests and cleaning 2020-07-01 15:12:34 +02:00
Martin Diehl a7e3dd5a56 Merge branch 'development' into Vectorize-Orientation 2020-07-01 13:30:39 +02:00
Martin Diehl e18a5b8a1b simplifications + more tests 2020-07-01 08:57:28 +02:00
Martin Diehl de8e9b5fc1 fast reduced operation 2020-07-01 00:37:02 +02:00
Martin Diehl 23365660d8 polishing 2020-06-30 23:18:32 +02:00
Martin Diehl ef0c78745a fix for vectorized in_SST + test 2020-06-30 23:05:41 +02:00
Martin Diehl 49d448dced vectorized and cleaned 2020-06-30 21:43:57 +02:00
Martin Diehl be21d1289d using slicing method 2020-06-30 16:33:04 +02:00
Martin Diehl c86e3e292c WIP: cleaning namespace 2020-06-30 14:07:10 +02:00
Martin Diehl 9d94b521ad polishing 2020-06-30 13:31:58 +02:00
Martin Diehl ce7018164f WIP: more reasonable naming 2020-06-30 13:05:06 +02:00
Martin Diehl b8b34080fe enable array like slicing/iteration 2020-06-30 12:16:47 +02:00
Martin Diehl c8adfae0fa bugfix: wrong variables used 2020-06-30 07:16:49 +02:00
Philip Eisenlohr decbe8074a not using unassigned variable 2020-06-29 22:22:21 -04:00
Philip Eisenlohr d3b3d628b2 PEP conformity... 2020-06-29 22:07:14 -04:00
Philip Eisenlohr 39aac76859 __add__, from_range, fixed missing np.array(colors), show peppered... 2020-06-29 22:04:03 -04:00
Philip Eisenlohr 97ca1b1a9b try wxPython before tkinter, recent macOS otherwise fails 2020-06-29 22:02:12 -04:00
f.basile d06daec4cb reducec vectorized is improved 2020-06-29 18:25:45 +02:00
Martin Diehl 2d0c680daf useful information 2020-06-29 07:30:42 +02:00
f.basile 4875191ffd change if statement so github doesnt complain 2020-06-28 19:32:22 +02:00
f.basile a99f016438 problem with if value is true / if value == True 2020-06-28 19:29:52 +02:00
Martin Diehl 37f7362cbe Merge branch 'development' into misc-improvements 2020-06-28 19:23:17 +02:00
Martin Diehl 323f828606 Merge branch 'development' into modernize_colormap 2020-06-28 19:09:52 +02:00
f.basile 8484d2e6cc fix github stuff 2020-06-28 19:05:10 +02:00
f.basile 352c4e95f1 more vectorized 2020-06-28 19:03:06 +02:00
Martin Diehl b3f5ee022a unified style 2020-06-28 11:40:19 +02:00
Martin Diehl 6a748d2edf do not expand single strings into characters 2020-06-28 11:19:18 +02:00
Martin Diehl ae4146f1c6 report version, write out 'modern' ASCII table style 2020-06-28 11:18:22 +02:00
Martin Diehl e81b67e964 polishing 2020-06-28 10:32:59 +02:00
Martin Diehl 1c03bd157f more testing 2020-06-28 10:25:28 +02:00
Martin Diehl b78c809375 real output 2020-06-28 10:25:28 +02:00
Martin Diehl 3513754647 low/high instead of left/right 2020-06-28 10:25:28 +02:00
Martin Diehl d965d66319 [skip ci] documenting 2020-06-28 09:34:10 +02:00
Martin Diehl 8a9a768a77 support pathlib.Path 2020-06-28 07:17:51 +02:00
Martin Diehl 8c8132bcd7 coordinates should not have random names 2020-06-27 23:37:09 +02:00
Martin Diehl c929af12c0 testing/polishing 2020-06-27 19:44:12 +02:00
Martin Diehl 234699bd18 reverse should return DAMASK colormap 2020-06-27 16:25:10 +02:00
Martin Diehl e779e190ea new colormap class for use in python
- based on matplotlib "ListedColormap"
- constructors
  - Array of RGB values (inherited),
  - 'from_bounds': perceptual uniform colormap within given bounds
  - 'from_predefined': from matplotlib or DAMASK templates
- export to files (WIP)
- preview on screen
2020-06-27 16:12:40 +02:00
Martin Diehl 1f9b5280cb forgotten debug statement 2020-06-26 11:47:04 +02:00
Martin Diehl a69f82e7c3 speed up vtk out
- limit to single precision
- write in background
2020-06-26 11:45:54 +02:00
Martin Diehl bfae88a364 numpy compatible 2020-06-26 11:45:30 +02:00
Martin Diehl bddb514072 more systematic reporting 2020-06-26 11:45:06 +02:00
Martin Diehl 3290e2c585 handle even obscure directions 2020-06-25 08:29:36 +02:00
Martin Diehl 5d7213b062 restore reminder to document changes
causes conflicts with outdated tests and is not urgent: postpone until
release.
2020-06-25 08:19:07 +02:00
Martin Diehl c9829f0f1f only Chuck Norris can divide by zero 2020-06-25 08:18:39 +02:00
Martin Diehl cd23937af5 Merge branch 'development' into f-strings 2020-06-25 07:46:24 +02:00
Philip Eisenlohr e64d353865 condensed scale_to_coprime; added test of scale_to_coprime 2020-06-24 18:37:33 -04:00
Philip Eisenlohr 9999560247 easier understanding of from_ang data layout interpretation 2020-06-24 18:36:43 -04:00
Philip Eisenlohr 14d3b7e66d more f-stringing 2020-06-24 16:59:55 -04:00
Philip Eisenlohr 966b6f8007 shapes init copes with integers instead of strict tuples; introduced f-strings 2020-06-24 14:18:06 -04:00
Philip Eisenlohr f8f433e826 introduced f-strings 2020-06-24 14:13:56 -04:00
Philip Eisenlohr ff858fd4c8 [skip ci] corrected help string for "srepr" 2020-06-24 20:13:09 +02:00
Philip Eisenlohr 4314ec1f37 [skip ci] started to replace .format() with f-strings 2020-06-24 11:02:37 -04:00
Anderson Wallace Paiva do Nascimento 3d93a5ff00 Merge branch 'migrate-to-pathlib' into 'development'
Migrate to pathlib

See merge request damask/DAMASK!177
2020-06-24 14:54:36 +02:00
Martin Diehl 6fa5ae6ebf literature from Karo 2020-06-22 23:14:58 +02:00
Martin Diehl e33895dd35 [skip ci] better logic 2020-06-21 10:37:09 +02:00
Martin Diehl c6a5bb8a3b is 2020 2020-06-21 10:04:45 +02:00
Martin Diehl 4c5939ef23 small polishing 2020-06-20 22:51:00 +02:00
Martin Diehl 15b43bcebf from_directions is not general, removed
polishing
2020-06-20 19:57:49 +02:00
Martin Diehl 3f63a4fdbc [skip ci] typo 2020-06-20 18:13:34 +02:00
Martin Diehl 4dae3643c9 vectorized IPF color working
results also uses the vectorized form.
Still needs careful checking
2020-06-20 17:15:13 +02:00
Martin Diehl ebdb65d31f standard broadcast_to behavior 2020-06-20 16:35:22 +02:00
Martin Diehl 262346ff5a polishing 2020-06-20 16:34:19 +02:00
Martin Diehl d93ed2bc5c several improvements:
- vectorized from_directions
- more tests (96% coverage, only random functionality is untested)
- updated documentation, folloing numpy standard
- inverse operator '~' introduced
2020-06-20 12:20:43 +02:00
Martin Diehl 055fa64f5f better readable 2020-06-19 12:25:46 +02:00
Martin Diehl 13bf7515ce WIP (broken?): vectorized calculation of IPF color 2020-06-19 10:54:13 +02:00
Martin Diehl 1648963b57 vectorized equivalent orientation calculation 2020-06-18 22:53:04 +02:00
Martin Diehl cdda556e18 small improvements
- hack for reporting multiple rotation
- bugfix for vectorized Rodrigues vector
- more general broadcasting (even more powerfull then np.broadcast_to)
2020-06-18 22:30:22 +02:00
Martin Diehl fe5e5babfe more useful for vectorized calculations 2020-06-18 22:29:28 +02:00
Samad Vakili 694b7ec3c5 mechanics done 2020-06-09 21:27:08 +02:00
f.basile cb1779ef9a fix pep257: D415 / First line should end with a period, question mark, or exclamation point (not e) 2020-06-05 13:49:30 +02:00
f.basile eae9698d22 equivalent,related and inFZ vectorized + pytest 2020-06-05 13:48:12 +02:00
f.basile ac09a2912a fix python/damask/_orientation.py contains invalid python3 code 2 2020-06-04 16:45:44 +02:00
f.basile 6a24aee171 fix python/damask/_orientation.py contains invalid python3 code 2020-06-04 16:44:57 +02:00
f.basile 3897136f85 avoid python/damask/_orientation.py exceeds line length limit (maximum line length 141 > 132) 2020-06-04 16:43:28 +02:00
f.basile 0c41e33434 orientation.equivalent takes several rotations at the same time + small test"
"

""
2020-06-04 16:39:24 +02:00
Martin Diehl a9c61ede69 bugfix: should also work if DAMASK_NUM_THREADS is not set 2020-06-03 20:24:18 +02:00
Martin Diehl bda555fd1c we are looking for a path, not for a file 2020-06-03 16:47:03 +02:00
Martin Diehl bb5485927e names like 2020.2 cannot be converted to int 2020-06-03 15:18:46 +02:00
Martin Diehl 5da1aa49bc string should be a Path object 2020-06-03 15:17:00 +02:00
Martin Diehl 9b04a45bbd bugfix (wrong variable name) 2020-06-03 13:53:00 +02:00
Martin Diehl 3be1a33820 easier to read 2020-06-03 13:32:47 +02:00
Martin Diehl c5d0c7e52e easier to read, more flexible 2020-06-03 10:44:40 +02:00
Martin Diehl ac9fddd9e9 Merge remote-tracking branch 'origin/development' into misc-improvements 2020-06-02 00:12:50 +02:00
Martin Diehl a51cc39613 proper docstring 2020-06-01 22:13:01 +02:00
Martin Diehl 72a0b1fae5 testing and polishing 2020-06-01 11:33:22 +02:00
Martin Diehl 7a193639fb also show datasets without unit
currently, this is only the orientation dataset
Also enable renames. Since this alters the history, the user need to
enable this
2020-05-31 23:50:06 +02:00
Martin Diehl bcb0ce5e5e typo 2020-05-31 18:51:12 +02:00
Martin Diehl adb92de8cc Merge branch 'development' into less-shell-scripts 2020-05-31 18:49:51 +02:00
Martin Diehl 421b8f4268 documented function interfaces 2020-05-30 17:31:50 +02:00
Martin Diehl 865a505186 fix for logarithmic strain 2020-05-27 22:32:35 +02:00
Martin Diehl 56afc03f3c only vectorized version needed
use single point/simple versions only for testing
2020-05-27 18:05:08 +02:00
Martin Diehl 0fe450a033 Merge branch 'misc-improvements' into less-shell-scripts 2020-05-27 17:40:13 +02:00
Martin Diehl 31f72aa912 handle min/mid/max eigenvalues/vectors separately
storing as matrix/vector is not favorable for paraview and in many
cases, either min or max are of interest only
2020-05-27 17:39:46 +02:00
Samad Vakili f9c33d9210 mechanics checked for an array with arbitrary dimensions 2020-05-26 16:27:27 +02:00
Martin Diehl 908788271a Merge branch 'misc-improvements' into less-shell-scripts 2020-05-26 07:24:03 +02:00
Martin Diehl 7f09c90c7d different h5py versions seem to throw different errors 2020-05-26 06:39:11 +02:00
Martin Diehl 6f7c7005b0 bugfix:
- proper overwrite
- no out of bounds error for empty time selection (just pick nothin)
2020-05-25 23:54:06 +02:00
Martin Diehl d6877da2b6 single source of truth 2020-05-25 20:15:45 +02:00
Martin Diehl d9d089c359 avoid repetition and do correct encode/decode 2020-05-25 20:13:57 +02:00
Martin Diehl 5d0a2aac8f polishing reporting 2020-05-25 20:13:57 +02:00
Martin Diehl b9e16ea951 overwriting datasets makes sense in special cases
but prevent user from accidently doing that and store the information
2020-05-25 20:13:57 +02:00
Martin Diehl 248f199a7b track creation time 2020-05-25 18:51:10 +02:00
Martin Diehl b1b8d02320 typo 2020-05-25 16:41:23 +02:00
Martin Diehl 9d7158b51a Merge branch 'misc-improvements' of magit1.mpie.de:/damask/DAMASK into misc-improvements 2020-05-25 16:40:23 +02:00
Martin Diehl f07eaf19d0 fixed broadcasting + corresponding test 2020-05-25 16:37:08 +02:00
Martin Diehl 784d6d09d9 cleaning 2020-05-25 15:55:38 +02:00
Martin Diehl dad7c7a2a0 Merge branch 'vectorize_rotation' into misc-improvements 2020-05-25 15:50:03 +02:00
Martin Diehl 3e2cbef780 Merge remote-tracking branch 'origin/development' into vectorize_rotation 2020-05-25 15:46:27 +02:00
Martin Diehl 77b68ab86f using rotation class for rotations 2020-05-25 09:39:39 +02:00
Martin Diehl 39505507f1 not needed anymore 2020-05-25 08:07:12 +02:00
Martin Diehl 17aa3c00dc more tests 2020-05-24 22:52:00 +02:00
Martin Diehl 296308e11e fix for rotation around 90 deg
more tests
2020-05-24 20:52:19 +02:00
Martin Diehl 34adefd4ca simplified 2020-05-24 18:30:45 +02:00
Samad Vakili 987c4a9e8d first commit mechanics 2020-05-24 18:30:44 +02:00
Martin Diehl 594fcb2b72 seems more appropriate 2020-05-24 15:10:53 +02:00
Martin Diehl 3231a49107 centralize functionality 2020-05-24 09:39:58 +02:00
Martin Diehl a3d9520c4b polishing 2020-05-23 15:54:28 +02:00
Martin Diehl 0549e33a00 vectorized/fast 2020-05-23 08:38:57 +02:00
Martin Diehl 7bd681a5ed very simple test 2020-05-22 19:04:02 +02:00
Martin Diehl b33de48528 testing broadcasting 2020-05-22 15:12:37 +02:00
Martin Diehl 23b1381eaf give credit 2020-05-21 11:30:25 +02:00
Martin Diehl 16f30a10d0 polishing 2020-05-20 23:50:08 +02:00
Martin Diehl 353fd3ceb6 more tests
now 95% test coverage of Rotation class
2020-05-20 19:16:31 +02:00
Martin Diehl 128a96e7f6 vectorized formula is enough 2020-05-20 18:13:51 +02:00
Martin Diehl bb419d49df polishing 2020-05-20 16:19:12 +02:00
Martin Diehl 9240dd59b2 mark as internal
all functionality (+ sanity checks) can be done with the class
functionality
2020-05-20 11:11:07 +02:00
Martin Diehl 9694767997 all seems to work now 2020-05-20 09:01:38 +02:00
Martin Diehl 1d8903bb0c transition code 2020-05-20 00:18:44 +02:00
Martin Diehl 1fa4a07bb8 for backward compatibility 2020-05-19 23:39:01 +02:00
Martin Diehl 3e00269179 again some more tests 2020-05-19 23:24:12 +02:00
Martin Diehl 1c53a37de4 more tests and adjustments to tolerances 2020-05-19 21:03:30 +02:00
Martin Diehl a6b0aaffba more tests
Hotfix needed for axis angle to matrix (not used in DAMASK, needs
further investigation)
2020-05-19 19:41:50 +02:00
Martin Diehl de79a5af43 directly test the internal conversions
some work to do ...
2020-05-19 09:55:23 +02:00
Martin Diehl 065c624f94 fix for backward compatibility 2020-05-19 09:10:14 +02:00
Martin Diehl ebf05a279e standard name 2020-05-19 08:59:03 +02:00
Martin Diehl 1a3a4a800e vectorized 2020-05-19 07:59:24 +02:00
Martin Diehl b6eebcd704 small fixes (testing P=+1) 2020-05-19 07:57:40 +02:00
Martin Diehl b200894a40 bugfix and further test 2020-05-19 07:57:40 +02:00
Martin Diehl 3dc90ddb94 use the formula from the paper, not from the reference implementation
a few multiplications should be faster than a transpose
2020-05-19 07:57:40 +02:00
Martin Diehl a25dd1c438 cleaning 2020-05-19 07:57:40 +02:00
Martin Diehl 743e91a78d cleaning 2020-05-17 08:01:34 +02:00
Martin Diehl 652ece6bb3 fix: wrong capitalization 2020-05-17 07:25:17 +02:00
Martin Diehl 2550447169 Merge branch 'development' into docstring-sphinx-adjustments 2020-05-17 00:10:58 +02:00
Martin Diehl a90865c877 non-vectorized versions not needed anymore
using them only for testing purposes
2020-05-17 00:10:18 +02:00
Martin Diehl 9ba419c2c3 Merge branch 'development' into vectorize_rotation 2020-05-16 20:58:06 +02:00
Martin Diehl 044f069437 bugfix: selected wrong data 2020-05-16 17:06:55 +02:00
Martin Diehl a279785149 Merge branch 'development' into misc-improvements 2020-05-16 17:01:48 +02:00
Martin Diehl 19638168e6 more sensible type checking and errors 2020-05-16 13:23:32 +02:00
Martin Diehl 9fa1539163 using new names 2020-05-16 11:17:12 +02:00
Martin Diehl 235f3c0df7 bugfix: copy and paste error 2020-05-16 11:16:52 +02:00
Martin Diehl e2ba294b75 bugfix: wrong variable 2020-05-16 09:40:32 +02:00
Martin Diehl 2dc46b783a simplified and tested 2020-05-16 00:58:40 +02:00
Martin Diehl dc508cdfce Merge remote-tracking branch 'origin/misc-improvements' into vectorize_rotation 2020-05-15 23:25:42 +02:00
Martin Diehl 3fd868dc45 Merge branch 'development' into vectorize_rotation 2020-05-15 23:25:36 +02:00
Martin Diehl b5b9bfaa99 need space at end of definition list 2020-05-13 11:36:16 +02:00
Martin Diehl 66b928c5af using doctest style
https://docs.python.org/3/library/doctest.html
https://numpy.org/doc/stable/docs/howto_document.html#sections (section
15)
2020-05-13 10:47:49 +02:00
Martin Diehl 6f3b526811 Merge branch 'development' into docstring-sphinx-adjustments 2020-05-13 10:38:45 +02:00
Martin Diehl b75e98ca3f forgotten debug statements
+ polishing of XDMF output
2020-05-07 19:12:05 +02:00
Martin Diehl c2b4f5516e DADF5_postResults tries to combine datasets, this does not work 2020-05-07 00:14:14 +02:00
Martin Diehl ef4a4dad4a shape property and numpy-like broadcasting
this makes it easy to apply a single rotation to a field
2020-05-05 14:44:08 +02:00
Martin Diehl eeb0df3a55 do not store absolute path 2020-05-05 10:42:54 +02:00
Martin Diehl 31c397255d equivalent (for a valid DADF5 file) but faster 2020-05-05 10:18:48 +02:00
Martin Diehl 14cdc031e0 write XDMF files
the limitation to scalar, 3-vector and 3x3-tensor comes currently from
XDMF/vtk/paraview

extension to multiple constituents and unstructured meshes might be
possible
2020-05-05 09:57:22 +02:00
Martin Diehl 6e99956b58 Merge branch 'development' into misc-improvements 2020-05-05 09:22:53 +02:00
Martin Diehl 5f3f87cd68 vectorizing cubochoric conversions 2020-05-04 17:43:38 +02:00
Martin Diehl 7d1e0850ab test + resulting bug fix 2020-05-03 17:04:03 +02:00
Martin Diehl 5d4b554b00 WIP: vectorizing 2020-05-03 07:48:13 +02:00
Martin Diehl c241eaec15 rely on correct input data 2020-05-03 07:23:46 +02:00
Martin Diehl f0bb50b97d vectorized rotation function 2020-05-02 15:22:17 +02:00
Martin Diehl c7a77ebc26 Merge branch 'development' into integrate-lambert 2020-05-02 09:21:42 +02:00
Martin Diehl 2df78e4e2f vecorized pyramid function for lambert projection 2020-05-02 09:17:31 +02:00
Martin Diehl ce9bdc50a4 common variable names 2020-04-29 14:46:58 +02:00
Martin Diehl 9e79935add Merge branch 'development' into less-shell-scripts 2020-04-28 20:43:16 +02:00
Martin Diehl 6864b9525d go back to original dir as soon as possible 2020-04-26 14:52:27 +02:00
Martin Diehl f02c77b6d0 more reasonable tolerance
still relatively high because ctf files store position with constant
number of digits and floating dot. Hence, the precision is very low
2020-04-24 20:01:57 +02:00
Martin Diehl 1610d5a5d2 Merge branch 'development' into misc-improvements 2020-04-24 20:01:40 +02:00
Martin Diehl 707324887f inform the user about planned functionality 2020-04-24 06:52:09 +02:00
Martin Diehl 042f64200c Merge branch 'development' into vectorize_rotation 2020-04-24 06:31:14 +02:00
Francisco Jose Gallardo Basile 898cf42aca Merge branch 'fix-grid-convention' into 'development'
Fix grid convention

See merge request damask/DAMASK!160
2020-04-23 19:02:23 +02:00
Martin Diehl cc3fa156cf support change of directory one object has been created 2020-04-23 16:29:20 +02:00
Martin Diehl a0b7c51bec less strict tolerances
grid position reported by EBSD has only a few decimal places, so
rounding errors occur
2020-04-22 23:32:34 +02:00
Martin Diehl 8ba547a1b5 no need for an extra file 2020-04-22 13:23:50 +02:00
Martin Diehl a39e6b7af9 hide internal variables 2020-04-22 13:12:30 +02:00
Martin Diehl a8c6fdd9ba for the sake of completeness 2020-04-22 07:40:02 +02:00
Martin Diehl 7efe14be35 Merge branch 'development' into vectorize_rotation 2020-04-21 19:29:30 +02:00
Martin Diehl 97a5880d76 ensure correct shape 2020-04-21 13:22:55 +02:00
Martin Diehl 75d7238376 vectorized as_XXX 2020-04-21 12:27:50 +02:00
Martin Diehl ae3eca5f98 fix for vectorized from_random 2020-04-21 12:08:16 +02:00
Martin Diehl ac75b9e4ca improved reporting + test 2020-04-21 11:17:15 +02:00
Martin Diehl 23fc58699f vectorize Rotation.fromXXX functions 2020-04-21 10:55:45 +02:00
Martin Diehl 4a05cdbbbb copy and paste error 2020-04-21 03:26:26 +02:00
Martin Diehl 528378eba2 polishing/bugfix
* HDF5 data has x fast, therefore reshape needs to be aware of 'F' order
* Datatype for True/False is 'bool' in python, not 'Boolean'
2020-04-20 22:51:51 +02:00