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1300 Commits

Author SHA1 Message Date
Martin Diehl 19df6f8a71 general polishing 2019-01-05 23:55:10 +01:00
Martin Diehl 77a0cfd7a2 also adjusted plastic_isotropic 2019-01-05 23:41:13 +01:00
Martin Diehl dc64841f15 mutual best practise phenopowerlaw <-> disloUCLA 2019-01-05 23:40:59 +01:00
Martin Diehl f354f04f49 Merge remote-tracking branch 'origin/development' into NewStyleKinematicHardening-3 2019-01-05 21:21:02 +01:00
Martin Diehl c2affa9974 Merge branch 'development' into 22-NewStyle_disloUCLA-2 2019-01-05 15:40:08 +01:00
Martin Diehl 2f3b518562 rename was missing 2019-01-05 10:06:37 +01:00
Martin Diehl 4d0166351e missing initialization caused segmentation fault 2018-12-31 11:35:01 +01:00
Martin Diehl c5dd8d1265 unified style 2018-12-30 18:11:03 +01:00
Martin Diehl 53d2d4e23d re-enabled debug output 2018-12-30 16:09:51 +01:00
Martin Diehl 2000eff578 re-enabled debug 2018-12-30 15:39:48 +01:00
Martin Diehl 311b8be715 simplifying 2018-12-30 15:14:43 +01:00
Martin Diehl e217ce3a25 fixed output 
and a few more changes following phenopowerlaw
 2018-12-30 15:04:04 +01:00
Martin Diehl 892ba86d26 consistent API 2018-12-30 14:37:31 +01:00
Martin Diehl b53cda6411 figuring out "instance" and "of" centrally 2018-12-30 14:01:05 +01:00
Martin Diehl 8f99f1ce61 avoid conversion 33<->6 3333<->9 2018-12-30 12:35:26 +01:00
Martin Diehl c8dc2cb137 best practises from phenopowerlaw 2018-12-30 11:33:27 +01:00
Martin Diehl ed79c7f75c all not compatible with new structure 2018-12-30 10:41:11 +01:00
Martin Diehl fa88065591 small polishing 2018-12-25 14:20:01 +01:00
Martin Diehl e5ef7edbd2 kinetics similar to phenopowerlaw 2018-12-22 15:22:41 +01:00
Martin Diehl b46a5b3135 save space 2018-12-22 14:47:02 +01:00
Martin Diehl c97a46826a simplified 2018-12-22 14:42:10 +01:00
Martin Diehl 8a27431c6d bugfix 
bracket falsely removed in last commit
 2018-12-22 13:28:16 +01:00
Martin Diehl d1e6541c14 Merge branch 'development' into 42-new-coding-style-for-homogenization-NEW 2018-12-22 12:50:13 +01:00
Martin Diehl 13f321d992 cleaning almost done 2018-12-22 09:05:46 +01:00
Martin Diehl 1520adb3fb not compatible with generalized solute flux 2018-12-22 08:37:58 +01:00
Martin Diehl 708fc9f6b3 not compatible with generalized solution handling 2018-12-22 08:32:47 +01:00
Martin Diehl 226bbad013 don't waste character space 2018-12-22 08:31:13 +01:00
Martin Diehl e083520c73 trans systems now handled centrally 
remove inactive (= untested) definitions.
 2018-12-22 07:49:52 +01:00
Martin Diehl e6d5992bb4 poviding stiffness for transformation as function 2018-12-22 00:19:51 +01:00
Martin Diehl f4cf38fa22 implementing C66 rotation for transformation 2018-12-21 23:53:21 +01:00
Martin Diehl b3d14b00b6 cleaning 2018-12-21 23:07:31 +01:00
Martin Diehl 9094bb9a64 private functions at the end 2018-12-21 22:41:39 +01:00
Martin Diehl b6cb456b27 function description as for phenopowerlaw 2018-12-21 18:15:56 +01:00
Martin Diehl d8a7fdd01d function description was wrong 2018-12-21 18:14:54 +01:00
Martin Diehl 2d47af7f56 shortened 2018-12-21 18:10:18 +01:00
Martin Diehl 939cd0e5bf cleaning/adjusting names to paper 2018-12-21 16:01:16 +01:00
Martin Diehl dcd22ccb6a put private functions at the end 
for easy separation
 2018-12-21 14:56:32 +01:00
Martin Diehl da3f105875 cleaner interface to kinetics 2018-12-21 14:28:25 +01:00
Martin Diehl 24ddd8362d cleaning and simplifying 2018-12-21 12:47:09 +01:00
Martin Diehl 2e8072b768 simplifying 2018-12-21 12:33:31 +01:00
Martin Diehl 8832c04dd0 more sanity checks 
number of arguments for values per system needs to match the number of
systems that are defined
 2018-12-21 11:52:23 +01:00
Martin Diehl d4c7e8f33b Merge branch 'development' into 22-NewStyle_disloUCLA-2 2018-12-21 06:46:35 +01:00
Martin Diehl fe1183e010 polishing 2018-12-21 06:15:01 +01:00
Philip Eisenlohr a1ff380ef4 slightly better aligned debug output 2018-12-20 17:14:55 -05:00
Martin Diehl 2476dd4d8b shearRates more similar to kinetics 2018-12-19 07:47:13 +01:00
Martin Diehl 89196b953f simplified 2018-12-19 06:57:28 +01:00
Martin Diehl f4cd4bbac5 cleaning 2018-12-18 18:17:06 +01:00
Martin Diehl 4caf93a22f Merge branch 'development' into 42-new-coding-style-for-homogenization-NEW 2018-12-18 17:57:29 +01:00
Franz Roters cd8ee4503b Merge branch '22-NewStyle_disloUCLA-2' into 'development' 
Resolve "New coding style for plastic_disloUCLA"

See merge request damask/DAMASK!51
 2018-12-18 15:02:12 +01:00
Martin Diehl 0e4dede606 slowly approaching style of phenopowerlaw 2018-12-18 09:52:13 +01:00
Martin Diehl 63c417fbe0 failed if dataset does not exists 
empty datasets are not written out
 2018-12-18 08:44:11 +01:00
Martin Diehl 27322847a4 reporting command line call 2018-12-17 21:30:30 +01:00
Martin Diehl d00154299b missing information on increment cause HDF5 error 
mistook write() statement with a left-over debug message
 2018-12-17 20:13:45 +01:00
Martin Diehl 3f3e23c2c8 polished addAttribute and use it to store meta data 2018-12-17 16:15:16 +01:00
Martin Diehl b2062f2a12 label were stored including [] and comments 2018-12-17 16:11:01 +01:00
Martin Diehl 36c7157ee9 vectorized 2018-12-17 08:33:46 +01:00
Vitesh Shah 3e38c4ef8c The attribute interface works for single processor output and single valued attribute 2018-12-15 17:21:03 +01:00
Vitesh Shah d2c7b33cf6 New files made nonexecutable 2018-12-14 11:39:08 +01:00
Vitesh Shah 669d0c6c8f made it nonexecutable 2018-12-14 11:37:44 +01:00
Vitesh Shah 7e41ae264d Made changes with the calling signature 2018-12-14 11:35:41 +01:00
Martin Diehl 4dd064a275 polishing 2018-12-14 09:23:52 +01:00
Martin Diehl 25bd6faf7c left over "if" caused wrong coordinate systems for hex 2018-12-14 06:39:49 +01:00
Martin Diehl 85f1368480 Merge branch 'development' into NewStyleKinematicHardening-2 2018-12-14 06:21:08 +01:00
Martin Diehl 8bea82c72f Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-12-14 05:49:34 +01:00
Martin Diehl 4edaab6da6 definition of cleavage systems did not work 
bct definition was overly complicated
 2018-12-13 11:11:45 +01:00
Martin Diehl 3352cbac4b segmentation fault 
expected instance but passed in phase
 2018-12-13 10:51:35 +01:00
Martin Diehl 20671b8ed3 cleaning 2018-12-13 09:51:43 +01:00
Martin Diehl 416d3411c1 leaner APIs 2018-12-13 09:34:40 +01:00
Martin Diehl 98cc79d629 ph not needed any more 2018-12-13 09:14:57 +01:00
Martin Diehl d99778dd96 further cleaning 2018-12-13 08:43:26 +01:00
Martin Diehl a7351deab0 simplified 2018-12-13 08:36:01 +01:00
Martin Diehl 6b5131e0f3 no need to have as a separate state 2018-12-13 07:06:12 +01:00
Martin Diehl dfafddec57 simplifying 2018-12-13 06:59:56 +01:00
Martin Diehl 2aa6b12126 IMPORTANT Behavior change: Slip (Lp) happens in twinned volume fraction 
aliases for associate do not have to be defined
 2018-12-12 16:13:57 +01:00
Martin Diehl 3bab08fdeb Merge branch 'development' into 56-parallel-hdf5 2018-12-12 07:46:02 +01:00
Martin Diehl fd2d4d856b cleaned + suggested structure to write data 2018-12-12 07:45:20 +01:00
Martin Diehl cb28d10d79 dummy structure to write plasticity results 2018-12-12 06:40:57 +01:00
Martin Diehl 1446e9f4ab polished 
sanity checks + documentation
 2018-12-12 00:30:20 +01:00
Martin Diehl bf2b074787 make parameters obvious 2018-12-11 23:11:59 +01:00
Martin Diehl c29240c1c8 forestprojection can be calculated centrally 2018-12-11 23:00:56 +01:00
Martin Diehl ef23095332 using function for cleavage system definition 
only internally since damage related constitutive laws will be
re-written anyway
 2018-12-11 08:03:40 +01:00
Martin Diehl 754e5a960b polishing 
sometimes gives segmentation fault/division by zero.
probably the usual problem of dislotwin when running without friction
coefficient B
 2018-12-11 07:22:48 +01:00
Martin Diehl 1bcf41100d [skip ci] WIP: cleaning 
contains a few bugs
 2018-12-11 07:05:37 +01:00
Martin Diehl ee60ce0d98 further simplifications 2018-12-11 01:35:36 +01:00
Martin Diehl 2fac481a26 polishing/sorting 2018-12-11 00:39:50 +01:00
Martin Diehl cee905443b cleaner and safer 
- use functions from lattice instead of repeating code
- sanity check for twin nucleation
 2018-12-10 08:34:24 +01:00
Martin Diehl 51d8011afe cleaned 
- only define variables that are needed
- define variables where they are needed
 2018-12-10 08:33:20 +01:00
Martin Diehl efbd50c931 parameters in bold allow easy distinction 2018-12-10 05:52:36 +01:00
Martin Diehl 0f106e77d9 cleaning 2018-12-09 22:20:18 +01:00
Martin Diehl 95826d094c not needed anymore 2018-12-09 22:00:04 +01:00
Martin Diehl 1b571d33a7 using trans-trans interactions from lattice 2018-12-09 21:10:14 +01:00
Martin Diehl 8424ba76ac never used 2018-12-09 20:54:49 +01:00
Martin Diehl 132f417dee Merge remote-tracking branch 'origin/development' into 44-column-major-access-to-interaction-matrices 2018-12-09 20:33:28 +01:00
Martin Diehl 6256de8785 re-implemented sanity checks 2018-12-09 17:53:20 +01:00
Martin Diehl aa9cacdcb0 naming as in dislotwin+phenopowerlaw 2018-12-09 17:36:01 +01:00
Martin Diehl 9e03aae3bf vectorized 2018-12-09 17:35:48 +01:00
Martin Diehl ddecacb172 ready for vectorization 2018-12-09 16:35:28 +01:00
Martin Diehl accd39b27f structuring 2018-12-09 15:58:51 +01:00
Martin Diehl e0cd88d98a preparing for vectorization 2018-12-09 15:38:02 +01:00
Martin Diehl a0b389776d same structure as for dislotwin 2018-12-09 15:00:37 +01:00
Martin Diehl 331a2b9b78 simplified 2018-12-09 14:49:08 +01:00
Martin Diehl 89b054e67b ordered 2018-12-09 14:29:19 +01:00
Martin Diehl 58862a939d initial handling of symmetry introduced 2018-12-08 15:54:59 +01:00
Martin Diehl 5d6faff4d6 moving nice initializers to orientation 2018-12-08 15:44:00 +01:00
Martin Diehl ccdf1e5e8e polishing 2018-12-08 13:49:42 +01:00
Martin Diehl c1e5f66d77 make quaternion accesible 
output as usual array to completly hide the internal representation
 2018-12-08 13:03:27 +01:00
Martin Diehl 9686014ce0 polishing 2018-12-08 12:52:52 +01:00
Martin Diehl 5cdd603671 dummy orientations module 
needs to be extendend to include symmetry
 2018-12-08 11:40:27 +01:00
Martin Diehl 40d38ebf55 added rotation conversions 
modified versions from 3Drotations code (available on GitHub) by Marc De Graef
 2018-12-08 08:02:55 +01:00
Martin Diehl 5768356642 PGI compatible 2018-12-06 01:12:15 +01:00
Martin Diehl 72304638f9 PGI fails if optional argument is not present 2018-12-06 00:43:32 +01:00
Martin Diehl 0ed1bd11bd need to write out total increments 
otherwise, group/folder of the same name would exist
 2018-12-05 13:54:56 +01:00
Martin Diehl deedbc4fda standard conforming line continuation 2018-12-05 08:59:32 +01:00
Martin Diehl 49af6c70a7 PGI compiler complained about kind mismatch 2018-12-05 08:56:26 +01:00
Martin Diehl adffe41ffe writing group structure in file root 2018-12-05 00:05:43 +01:00
Martin Diehl ecb00af147 cleaning and separating functions 2018-12-04 23:09:25 +01:00
Martin Diehl 8f26fc9358 Merge remote-tracking branch 'origin/development' into 56-parallel-hdf5 2018-12-04 22:34:29 +01:00
Martin Diehl 9caa91ee14 polishing 2018-12-04 22:30:07 +01:00
Martin Diehl a34e27cfcd dependentState is more descriptive than microstructure 2018-12-04 21:53:22 +01:00
Martin Diehl 10445606ba simplified API + general polishing 2018-12-04 21:33:32 +01:00
Martin Diehl 3afb14bea1 simplified 2018-12-04 21:05:34 +01:00
Martin Diehl 0a02939138 vectorized 2018-12-04 20:50:02 +01:00
Martin Diehl 91a2748131 simplifying 2018-12-04 20:33:28 +01:00
Martin Diehl e604a3d9cc simplified 2018-12-04 00:09:11 +01:00
Martin Diehl 49b5271ca4 simplified 2018-12-03 11:25:29 +01:00
Martin Diehl fb651e24ef same structure as in phenopowerlaw 2018-12-03 10:48:37 +01:00
Martin Diehl 4b8f150731 Merge branch 'development' into 22-NewStyle_disloUCLA-2 2018-12-03 06:54:52 +01:00
Martin Diehl 17716b4fa7 Merge branch 'NOSlipFCC' into development 2018-12-03 06:35:29 +01:00
Vitesh Shah 801e472497 Made it non-executable 2018-11-30 17:34:26 +01:00
Vitesh Shah e3d8022776 Read and write works for all types of data in parallel with test module passed 2018-11-30 17:33:30 +01:00
Vitesh Shah 508d6cf9ef After merge 2018-11-30 15:25:58 +01:00
Martin Diehl bbba201362 simpler API 2018-11-30 10:38:05 +01:00
Vitesh Shah ab59274c35 Able to read the independent datasets (outside the groups) in parallel 2018-11-30 10:16:04 +01:00
Martin Diehl f02fa9b7b0 no need to parse the file 2018-11-30 08:36:56 +01:00
Martin Diehl 4e86d239de simplified 2018-11-30 08:25:23 +01:00
Martin Diehl c4df2eeac4 no need to know the phase id 2018-11-30 08:02:28 +01:00
Martin Diehl 47e32b39b9 avoid unallocated array for elasticity only 2018-11-30 07:27:23 +01:00
Martin Diehl 0ea5b58338 Merge remote-tracking branch 'origin/development' into 44-column-major-access-to-interaction-matrices 2018-11-29 11:00:36 +01:00
Martin Diehl 0387486a52 same name as in dislotwin 2018-11-29 10:37:06 +01:00
Martin Diehl 39c1df7542 further simplifications 2018-11-29 10:31:02 +01:00
Martin Diehl bbddb2558c cleaning 2018-11-29 09:22:56 +01:00
Martin Diehl 64e9c7fb77 mean free path and threshold stres don't have to be part of the state 2018-11-29 09:10:22 +01:00
Martin Diehl 28ec50a6a9 simpler reading in 2018-11-29 08:44:31 +01:00
Martin Diehl 252f1a6a75 invlabmdaslip does not need to be stored 2018-11-29 08:32:15 +01:00
Martin Diehl 228ef831f0 cleanding 
dependentState/microstructure don't need to be part of the complex state
handling
 2018-11-29 08:14:20 +01:00
Martin Diehl 9aec5f6db0 shorter notation 2018-11-29 07:27:35 +01:00
Martin Diehl c0663b9fba storing per family makes loops obsolete 2018-11-29 00:04:01 +01:00
Martin Diehl 5dc696c24e calculating Lp is simple if appropriate data structures are used 2018-11-28 22:40:29 +01:00
Martin Diehl 0649eafded simpler way of Lp calculation 2018-11-28 22:22:13 +01:00
Martin Diehl b917ae2cca function to initialize absolute tolerance for state not needed 2018-11-28 17:12:06 +01:00
Martin Diehl 5983496c35 get output from config module 2018-11-28 16:45:45 +01:00
Martin Diehl 6af633aa28 going towards the new API (ipc,ip,el not of interest) 2018-11-28 07:18:50 +01:00
Martin Diehl b923839b1d no need for conversion 33<->6 2018-11-28 06:44:32 +01:00
Martin Diehl 6e22a76a91 parameters from old 22-NewStyle branch 2018-11-28 06:24:58 +01:00
Martin Diehl e4c801d635 introducing parameter structure 2018-11-27 20:00:45 +01:00
Martin Diehl e305e99541 cleaning 2018-11-27 19:49:04 +01:00
Martin Diehl 6c23e9feb8 be lazy, use a function 2018-11-27 19:28:00 +01:00
Martin Diehl 01bc945579 avoid code duplication 2018-11-27 19:19:36 +01:00
Martin Diehl 87b7569eb5 preparing use of kinetics function 2018-11-27 19:01:55 +01:00
Martin Diehl d06dbf2e47 don't need to repeat code 2018-11-27 18:53:01 +01:00
Vitesh Shah d33df38b42 made it non-executable 2018-11-27 18:52:54 +01:00
Vitesh Shah 0265732e08 Parallel writing and reading of integer datasets working 2018-11-27 18:50:51 +01:00
Martin Diehl d89dc6cc00 preparing for the use of kinetics 2018-11-27 18:41:33 +01:00
Martin Diehl d451a3a7a0 calculation of shearrates etc in one function 2018-11-27 18:25:06 +01:00
Martin Diehl bfad81848a kinetics similar to phenopowerlaw 2018-11-26 22:36:32 +01:00
Yi-Chin Yang c13b9718f6 Merge remote-tracking branch 'origin/development' into NOSlipFCC 2018-11-26 16:10:14 +01:00
Vitesh Shah ef1e9cce0d Functionality to avoid creating datasets in HDF5 of zero dimensions 2018-11-26 15:38:31 +01:00
Martin Diehl cf4a0a69fd Intel compiler detected use of unallocated variable 
bug was in for a while
 2018-11-26 09:15:44 +01:00
Martin Diehl c63d297145 copied from phenopowerlaw 2018-11-26 07:10:43 +01:00
Martin Diehl 8f59a40f48 using new parameter structure for output 2018-11-26 01:34:38 +01:00
Martin Diehl 4c46f3daa5 adopting argument parsing to Phenopowerlaw 2018-11-26 00:14:27 +01:00
Martin Diehl 9f81fa8e9a prevent segmentation fault 
post_results better readable
 2018-11-25 21:39:59 +01:00
Martin Diehl 6f93f8de04 starting to introduce parallel structure for new style parameter reading 2018-11-25 19:37:46 +01:00
Martin Diehl 2b9a34eac4 Merge remote-tracking branch 'origin/development' into 20-NewStyleDislotwin 2018-11-25 17:12:26 +01:00
Martin Diehl 7cc2892e64 no need to calculate twinned volume fraction as state 2018-11-25 16:14:46 +01:00
Martin Diehl 8a253856f1 no need to perform the state integration 2018-11-25 15:38:14 +01:00
Martin Diehl 8ccec40e35 Merge remote-tracking branch 'origin/development' into 19-NewStylePhenopowerlaw 2018-11-25 13:39:34 +01:00
Martin Diehl 1808b37357 can be easily computed during postprocessing 2018-11-25 11:17:12 +01:00
Martin Diehl 917453d191 polishing 2018-11-25 11:14:09 +01:00
Martin Diehl c0ce95183c can be easily calculated during post processing 
and does not have to be a state
 2018-11-25 10:59:36 +01:00
Martin Diehl 1d936fc5f2 simple variable rename causes problem with GCC 7.3 
probalby a compiler bug
 2018-11-24 09:53:18 +01:00
Yi-Chin Yang efe90f86e2 missing comma 2018-11-23 19:00:37 +01:00
Yi-Chin Yang f0359d36b6 adding FCC {110}<110> family 2018-11-23 18:53:50 +01:00
Vitesh Shah e7581f06d9 Fixed error with parallel write 2018-11-23 17:54:02 +01:00
Vitesh Shah 0e55bd6140 started read parallelization but getting errors 2018-11-23 15:49:43 +01:00
Franz Roters 9760b138c2 added link lost during merge 2018-11-23 15:02:35 +01:00
Franz Roters a498e5580a Merge remote-tracking branch 'remotes/origin/54-populate-grains-deprecated' into development 2018-11-23 14:38:22 +01:00
Martin Diehl c7fb868b40 state layout was broken 2018-11-23 07:01:04 +01:00
Martin Diehl 6df68d9428 no need do constantly convert 3x3 matrix <-> 6 vector 2018-11-23 06:04:39 +01:00
Martin Diehl 8b4781cf28 no need to repeat code 2018-11-23 05:37:31 +01:00
Vitesh Shah a6bc2a16f1 Parallel works for groups and included write function for integer data 2018-11-21 19:35:37 +01:00
Vitesh Shah 5cc6d86c61 Added the parallelized functionality for integer datatypes (works for groups?) 2018-11-21 16:57:36 +01:00
Vitesh Shah d00e3105ed Made hdferr < 0 and removed the unnecessary call to h5getspace in hyperslab 2018-11-21 16:10:17 +01:00
Martin Diehl e2e045f75b using 'service function' for allocation of state 2018-11-20 19:46:55 +01:00
Martin Diehl d0be1d61db Merge branch 'development' into 20-NewStyleDislotwin 2018-11-20 19:41:30 +01:00
Martin Diehl ecde7e5953 Merge remote-tracking branch 'origin/development' into 20-NewStyleDislotwin 2018-11-20 19:38:18 +01:00
Martin Diehl baf56a0e94 respect dependencies of inclusion 2018-11-20 15:27:32 +01:00
Martin Diehl 50a1ba6287 hdferr needs to be integer type during compile time of HDF5 library 2018-11-20 15:26:49 +01:00
Vitesh Shah c0481307ee Changed the intent of input argument of dataset to inout 2018-11-20 11:54:51 +01:00
Martin Diehl be8e6cbe57 Merge branch 'development' into 19-NewStylePhenopowerlaw 2018-11-19 20:27:10 +01:00