f46d79ec87
simplified
2020-03-17 10:52:44 +01:00
ba8eab646b
clearer structure and faster
2020-03-17 10:39:33 +01:00
233642ed08
using library function
2020-03-17 10:16:53 +01:00
a2b21abcba
easier with zip
2020-03-17 09:52:13 +01:00
17e7b32b31
update to changes in Result class
2020-03-17 08:55:44 +01:00
1e1fb35e14
new class is easier to use
2020-03-17 08:40:03 +01:00
8e0a91f948
typo
2020-03-17 00:51:21 +01:00
0695cc1829
simplified
2020-03-16 22:50:09 +01:00
d87d13087c
unmaintained python2.7 scripts
2020-03-16 22:50:09 +01:00
a1beb80b54
double precision for vtkPoints
...
simplifies migration to new class
2020-03-16 22:50:09 +01:00
5a90982d85
do not add vertices to point cloud
2020-03-16 22:50:09 +01:00
8798dd1af3
new names consistently used
2020-03-02 23:47:29 +01:00
ed2489de9a
not needed anymore
2020-02-29 19:57:37 +01:00
f431dd2092
geom class is better suited than asciitable class
...
removing unused functionality from deprecated asciitable
2020-02-29 19:31:27 +01:00
48604292e2
Merge remote-tracking branch 'origin/development' into MiscImprovements
2020-02-25 17:33:39 +01:00
071dc6f4a5
adjusted to new signature
2020-02-21 18:50:30 +01:00
75280b9fb4
correct conversion for python3
2020-02-21 11:02:31 +01:00
f6c921e811
Merge branch 'development' into DADF5_point_calculations-2
2020-02-21 07:56:19 +01:00
bc1d356d21
fixing prospector complaints
...
'except Exception': not really nice, but shell scripts will be remove
soon anyway
2020-02-20 15:27:37 +01:00
e93f5c84ff
'buffered' has no effect any more
2020-02-20 15:05:38 +01:00
e3753e9444
use central functionality
2020-02-15 16:11:57 +01:00
ff41061759
no bare 'except'
2020-01-28 23:39:46 +01:00
ea560ee167
typo
2020-01-26 15:14:16 +01:00
757dc4e234
new style table
...
no header, comments given by '#': Very standard format, we just take
care of multidimensional columns via special label notation
2020-01-20 12:51:09 +01:00
d66b05134d
less code, faster execution
2020-01-15 14:09:26 +01:00
e2802ca640
Table replaces ASCIItable
2020-01-15 06:37:53 +01:00
ff60cf0b67
use new table class
2020-01-13 03:47:41 +01:00
f9772a3df8
more descriptive name
2020-01-13 02:51:49 +01:00
1bb94f03b8
polishing (prospector was complaining)
2020-01-12 00:21:14 +01:00
3938f34978
Merge branch 'MiscImprovements' into MoreImprovements
2020-01-11 22:37:41 +01:00
d4535dadb4
use American english
2020-01-11 20:33:29 +01:00
a3664bbde1
need to reverse F->C flip
2020-01-02 17:46:14 +01:00
a87e396b83
bugfix: need to addData to vtk
...
not really sure why 'SetScalars' was used for color. 'AddArray' seems to
work. Also, there seems to be no difference between 'data' and 'tensor'
2020-01-02 11:31:33 +01:00
05b2c80430
migrating ASCIItable to Table class
2019-12-26 14:34:22 +01:00
9e94955626
wrong coordinates for non-cubical grids
2019-12-24 15:58:37 +01:00
264afe00f9
using central functionality
2019-12-23 19:06:08 +01:00
27d6b91f18
using central funtionality
2019-12-23 10:19:38 +01:00
d26005960c
do not rely on singular value decomposition
2019-12-23 09:52:42 +01:00
93bc66d19f
same order as in mechanics
2019-12-23 09:33:14 +01:00
3c4c364107
bugfix:
...
wrong results when calculating multiple strain tensors. Introduced in cd6a4d1cfd
2019-12-23 07:01:34 +01:00
3ed9126845
also not needed
2019-12-23 06:35:22 +01:00
149e4d6d73
not needed
2019-12-23 05:51:41 +01:00
db14baec41
using central functionality
2019-12-22 22:23:48 +01:00
c3c08b5b53
using new class/unifying style
2019-12-22 16:16:04 +01:00
70cb1f0764
copy of addGridData W/O functionality for meshes
2019-12-22 16:01:39 +01:00
48c21045d7
centralized functionality for ang import
2019-12-22 14:57:57 +01:00
cde6853a20
do not repeat code
2019-12-22 07:20:23 +01:00
fe463515d0
following prospector advice
2019-12-22 07:07:34 +01:00
343da2e54d
Table class instead of ASCIItable
2019-12-21 21:45:00 +01:00
5b7139dc22
using specialized class
2019-12-21 19:09:28 +01:00
6989679d3b
using central functionality
...
- Table class for table data
- grid_filters for grid related functions
2019-12-21 19:03:36 +01:00
b293498864
fixing prospector complaints
2019-12-21 18:20:25 +01:00
da33ba17bc
using central (and tested) functionality
2019-12-21 18:17:04 +01:00
dd318c8d1d
Table class replaces ASCIItable class
2019-12-21 15:51:58 +01:00
0d1ff72c45
Merge branch 'grid-filters' into MiscImprovements
2019-12-21 06:57:38 +01:00
f0d3b29b82
Merge branch 'development' into MiscImprovements
2019-12-21 06:53:56 +01:00
2c5f7d3b5a
Merge branch 'development' into grid-filters
2019-12-20 14:32:20 +01:00
034367fa6a
Merge remote-tracking branch 'remotes/origin/noPostResults' into development
2019-12-20 11:40:57 +01:00
6114f5c325
inplace option does not exist anymore
2019-12-19 18:04:24 +01:00
7ccf836379
not needed for python-based workflow
2019-12-18 20:06:44 +01:00
4469f2f8f0
More general regex
2019-12-18 10:14:19 +01:00
186605610d
No phase name for generic datasets
2019-12-13 09:53:47 +01:00
c46c18de6f
taking care of prospector complaints
2019-12-10 16:23:06 +01:00
82c741d6bb
crystallite not needed anymore
2019-12-09 05:32:38 +01:00
1fcbc35611
untested python2.7 code
...
complicated code. Easier to re-implement from scratch if really needed
2019-12-09 05:25:22 +01:00
1955d09d3f
modernizing
2019-12-08 22:35:58 +01:00
0bf22fd03c
using central functionality
2019-12-08 22:35:39 +01:00
7dc128ad12
polishing
2019-12-08 18:33:43 +01:00
3d09a82f41
fixing prospector complaints
2019-12-08 18:22:05 +01:00
828e82605e
ensure that data is correctly ordered
2019-12-08 18:13:45 +01:00
75e93d9f0c
relying on central functionality improves readability
2019-12-08 15:56:15 +01:00
f19694f734
starting to use central functionality
2019-12-08 11:20:47 +01:00
0292e8fcc7
preparing transition to Geom and Table classes
2019-12-08 11:11:02 +01:00
871ff4c218
use geom class
2019-12-08 09:31:56 +01:00
12564557e6
using central functionality
2019-12-08 09:18:15 +01:00
b92cfbbd5b
do not use bare except
2019-12-07 20:15:50 +01:00
c6c77b64d2
following renames in grid_filter
2019-12-07 20:08:31 +01:00
e283acd606
correct way of importing for newer python versions
2019-12-07 20:07:46 +01:00
0b04f6a3bb
Merge branch 'development' into grid-filters
2019-12-07 10:52:00 +01:00
96710a238d
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into incs-no-leading-zero
2019-12-06 15:25:21 +01:00
a41871e2ac
Merge branch 'new-ASCII' into 'development'
...
New table class
See merge request damask/DAMASK!104
2019-12-06 14:58:16 +01:00
f2ac87eb2f
follow changes in Table class
2019-12-06 04:22:18 +01:00
f475d1a0d0
adjusted to changes in table class
2019-12-05 13:35:06 +01:00
0eddd8a5c2
Merge branch 'new-ASCII' into grid-filters
2019-12-05 13:28:18 +01:00
90fdb24faa
forgotten variable rename
2019-12-05 13:26:33 +01:00
274aaa7359
Merge branch 'new-ASCII' into grid-filters
2019-12-05 10:50:56 +01:00
1018b89296
nice to have..
2019-12-05 10:48:42 +01:00
53a38e3a97
polishing
2019-12-05 10:37:13 +01:00
3af696995d
did not work when piping
2019-12-05 08:36:32 +01:00
469d638afb
making table class feature complete
2019-12-05 06:57:09 +01:00
ee8e3386f4
shorter but still descriptive names
2019-12-05 06:16:29 +01:00
19c55990ab
works again and uses DADF5 intrisic features
2019-12-04 18:30:08 +01:00
999321e588
Merge branch 'new-ASCII' into grid-filters
2019-12-04 07:45:01 +01:00
58a190ede8
Merge branch 'development' into incs-no-leading-zero
2019-12-04 05:19:38 +01:00
9ad8743396
using central functionality
2019-12-03 22:00:21 +01:00
ff1778d149
Merge branch 'development' into new-ASCII
2019-12-03 15:56:49 +01:00
62ca2952fc
polishing
2019-12-03 11:27:14 +01:00
e2b13a5ca3
using de-facto standard naming
2019-11-29 19:32:18 +01:00
9b4252da68
smart handling of leading zeros
2019-11-29 16:58:11 +01:00
3e65d44e07
centralized facilities for differential operations
...
note the need to reverse the grid shape in data from the ASCII table. If x is fastest,
z is slowest we require x to be the rightmost index
2019-11-28 15:46:22 +01:00
4c4ccfe72e
not needed
2019-11-28 06:27:19 +01:00
a8016d64bb
simplified
2019-11-27 12:31:32 +01:00
cee095b58e
better use centralized code
2019-11-27 12:22:28 +01:00
7d4b982c73
make information on modifications mandatory
2019-11-27 12:08:23 +01:00
9ad74745c1
missing import detected by prospector
2019-11-27 08:48:41 +01:00
ab83dc2ebc
use central facilities
2019-11-27 08:45:01 +01:00
eb033e11b2
polishing
2019-11-27 08:44:38 +01:00
31d3958ca6
using fast new Table class
...
more a proof-of-concept since shell scripts are deprecated. The detailed
error handling of the former scripts is not implemented, i.e. the user
need to ensure that the files exist and the data has the correct shape
2019-11-26 22:59:42 +01:00
2d96136a0d
more general constructor for Table
...
reading from file is just one case (now handled by static method).
General constructor needs data and header information as dictionary.
Works only with python 3.7 where dict keeps the insertion order. Earlier
python versions/other implementations might fail.
2019-11-26 22:53:46 +01:00
845cfc34ec
similar logic as in geom class
...
- filename is not part of the object
- transparent handling of files, strings, and path-like objects for file
IO
2019-11-26 14:26:25 +01:00
81abc43920
Merge branch 'development' into new-ASCII
2019-11-26 10:29:05 +01:00
faeb5a98b4
Merge branch 'PythonImprovements' into no-crystallite
2019-11-25 21:41:38 +01:00
592878d364
need to invoke function
2019-11-25 17:29:13 +01:00
406ca39b2c
ASCII table unable to handle inhomogeneous situations
2019-11-24 21:23:43 +01:00
3e8518d861
following prospector guidelines
2019-11-24 19:30:00 +01:00
c9f9f7c681
pack causes trouble with tests ..
2019-11-24 19:02:19 +01:00
b2cdabd009
getting rid of shell scripts
2019-11-24 18:25:53 +01:00
816e86ae5f
phasing out python shell scripts
2019-11-24 15:13:26 +01:00
8186be6293
compress functionality should be part of the geom class
...
automated decision is base on heuristic whether compression is memory
efficient
2019-11-24 14:27:24 +01:00
6060abb375
cleaning
2019-11-24 09:10:47 +01:00
c9b1944493
handling of derived datatypes/structs
...
currently required for orientation
2019-11-24 08:50:27 +01:00
dfb95df689
migrating shell scripts to python class
2019-11-22 21:48:41 +01:00
fb286af354
[skip sc] first draft
2019-10-31 10:47:40 +01:00
a2e4917d3b
not needed for DADF5
2019-10-20 19:25:09 +02:00
da79949c2a
old python2 script, not needed for DADF5
2019-10-19 23:14:17 +02:00
f4a0a5cfe5
substitute error introduced when enabling MSC.Marc
2019-10-18 22:03:31 +02:00
bd7b5ad27b
old python2.7 scripts with only a loose connection to DAMASK
...
if needed, simply take them from an old release version
2019-10-18 21:46:44 +02:00
b70ad9ff54
Merge branch 'development' into DADF5-improvements
2019-10-18 20:54:54 +02:00
f8ffd7e39c
added specifics to resulting column label (sum or prod)
2019-10-18 09:30:43 -04:00
edcb8f9c4d
name change in development
2019-10-18 12:55:15 +02:00
de912c22b4
Merge branch 'development' into HDF5-spectral-displacements
2019-10-18 12:54:12 +02:00
76236a4a0c
direct initialization (float64 is anyway standard)
2019-10-17 22:41:18 +02:00
03a3edc128
added option to multiply values instead of summing them
2019-10-17 13:23:14 -04:00
91691744c6
Merge branch 'Marc-No-nonlocal' into 'development'
...
Marc no nonlocal
See merge request damask/DAMASK!98
2019-10-15 10:35:37 +02:00
d73e653f50
support for unstructured grid (FEM)
2019-10-14 14:13:03 +02:00
708bbd3cb9
mesh/grid type transparent handling of coordinates
2019-10-12 16:15:04 +02:00
513f1c6726
write out point data
...
might be possible to use a rectilinear grid for this also in the case of
grid solvers
2019-10-12 12:34:37 +02:00
b208fa6565
takeover from Vitesh's work with small adoptions to current DADF5
2019-10-12 08:02:57 +02:00
3206ee04bc
nodal displacements for grid solver
...
currently for non-MPI only
2019-09-27 20:38:02 -07:00
8793050329
fixed handling of subfolders
...
now inline with post results.
Still a little bit unclear what happens if an absolute directory is
given. Probably best to either specify absolute or relative with respect
to working directory
2019-09-19 16:10:07 -07:00
4cedcee0b4
handling of increments follows handling of other 'visible'-items
2019-09-15 17:08:03 -07:00
f6ac8c995f
simplified and selected better names
2019-09-15 16:00:19 -07:00
04aefa84bc
more appropriate names
2019-09-15 15:02:16 -07:00
de316f1afe
Merge remote-tracking branch 'origin/development' into even-more-HDF5-postprocessing
2019-09-14 12:48:42 -07:00
b85ac11c49
implemented ideas from discussion with Philip
...
group matching unified and with wildcard support
time step handling should become more convenient (WIP)
add_norm can not compute abs of scalar, added function for that
general polishing here and there
2019-09-14 09:07:23 -07:00
c13db4b3ca
renaming
...
on_air/active are not clear. visible seems to be the most appropriate
name
2019-09-13 21:49:22 -07:00
a6567e0cc6
safer to use functions
...
don't mess with attributes of the object, they might be renamed
2019-09-13 21:41:35 -07:00
002383afc2
solved problem with postprocessing
...
- to not 'try' with h5py library, it might have another 'try'. Check
explicitly for empty argument
also some polishing
2019-09-13 16:01:30 -07:00
52904a81dc
taking prospector complaints serious
2019-09-13 06:49:25 -07:00
a3c6f6682e
using eigh should ensure orthogonal eigenvectors
2019-09-13 06:42:01 -07:00
890a6cf42f
avoid floating point comparison and simply play it safe
2019-09-13 06:40:41 -07:00
0497b58629
use existing functionality
2019-09-13 06:38:22 -07:00
cd6a4d1cfd
that's all we need
2019-09-13 06:37:47 -07:00
66d8a3e601
stretch is symmetric (play it safe here)
2019-09-13 06:35:48 -07:00
79d2432c6c
R not needed
2019-09-13 06:33:00 -07:00
49b3cd2145
transpose evuivalent for rot but faster
2019-09-13 06:32:05 -07:00
462bb07efd
Merge branch 'development' into even-more-HDF5-postprocessing
2019-09-11 16:29:44 -07:00
926217fcb6
added possibility to reduce rotation to specific fundamental zone, and to output 3-dim Rodrigues vector
2019-09-10 15:09:27 -04:00
d446248d75
also ouptut materialpoint results if requested
2019-07-15 17:07:04 -07:00
b6bb8a4650
simple strain calculation for DADF5
...
further enhancement requires to give optional arguments to
add_genericpontwise
2019-07-06 21:41:29 -07:00
a8ed982706
[skip ci] better name
2019-06-15 07:31:30 +02:00
eb8be13203
missing import
2019-06-14 17:27:00 +02:00
1cf9c59850
standardizing
...
import follows PEP style guide, encoding not needed for python3
2019-06-14 13:03:30 +02:00
4ff3efb1a5
to 'stack' tables
2019-06-13 23:14:40 +02:00
bffeaa980d
restored Martin's logic, not clear why seemed to be broken with PE's former tests...
2019-06-03 14:43:23 -04:00
8d52a3d52a
polishing of geom_rescale; adopted modified testing reference
2019-06-03 14:15:23 -04:00
2870fdb25b
fixed buggy version
2019-06-03 13:39:45 -04:00
89e4bc800c
removed default size to adjust to changes in geom-class
2019-06-03 13:38:48 -04:00
60031cc806
changed periodic option to reflect to better reflect what happens
2019-06-03 13:35:37 -04:00
7ea417d585
rotated geometry maintains center of gravity
2019-06-03 13:30:14 -04:00
615ff4ed06
[skip ci] vectorized
2019-05-31 23:26:32 +02:00
bf27505faa
Merge branch 'development' into geometry-class
2019-05-31 16:21:50 +02:00
02671c5c03
bugfix
...
shoud now work for any possible combination of new and old grid and
offset
2019-05-31 15:58:47 +02:00
979145f023
vectorized
2019-05-31 10:27:26 +02:00
46f0ad052e
direct support for vtk output
...
- geom_check can now handle multiple files
- microstructure index is stored as integer in vtk file
2019-05-30 15:35:45 +02:00
08052737cf
if grid is an option, it is a tuple
...
tuples do not have the prod() function
2019-05-30 14:28:31 +02:00
c2a5f37818
round to reasonable precision
...
without symmetry, there are 36000**3 = 46656000000000 orientations
2019-05-30 14:11:54 +02:00
bf60cffab5
cleaning
2019-05-30 14:07:49 +02:00
d0c7f8b934
texture is typically the more interesting information
...
therefore, but it to the top
2019-05-30 14:05:45 +02:00
8380071564
using geom class
...
- dropped the use of the material class as it does not allow to have
empty phase and crystallite. The material.config class needs a severe
refurbishing (no crystallite, use orderedDict instead of hand written
solution, drop of texture components). Probably best solution is to
postpone this until we have a yaml/json reader for Fortran.
2019-05-30 13:30:38 +02:00
7d07a3752f
polishing
2019-05-30 13:30:18 +02:00
461611cde7
polishing
2019-05-30 11:26:47 +02:00
49c3903cc7
explicit loop for simpler code
...
- no invalid combintations any more (allow to move the original
microstructure out of the new canvas)
- handling of origin needs discussion. When we want to recover the old
behavior, the origin might be located outside of the new geometry
2019-05-30 11:26:07 +02:00
e974bb9c43
similar structure for building blocks
2019-05-30 10:45:17 +02:00
510b55df50
several improvements
...
- more error checking
- order of points can be arbitrary also for microstructure input
- grouping of same orientation/phase combinations
2019-05-30 10:33:01 +02:00
931fa9d36a
standardized and cleaned
...
-write to file if given
-type casting is done in the geom class
2019-05-30 10:20:07 +02:00
07276d511c
modern python formatting
...
- 2 digits should be precise enough for euler angles
- no need to pad grain ID with leading zeros
2019-05-30 10:03:55 +02:00
73df615ff3
numpy meshgrid can do this now
2019-05-30 09:45:30 +02:00
4e0e5a2329
new python formatting style
2019-05-30 09:41:22 +02:00
f30eda0267
no need to loop over files
...
will procude the same file over and over again
2019-05-30 09:32:37 +02:00
cdc8338347
full (not periodic) mirroring is geom_mirror default behavior
2019-05-29 20:22:29 -06:00
d79f0c6290
replace geom_canvas --blank with geom_fromScratch
2019-05-29 20:02:06 -06:00
fd9801ba09
StringIO not needed
2019-05-29 19:44:38 +02:00
d7e8a66746
polishing
2019-05-29 14:18:11 +02:00
16bd5294aa
loop order as intented
2019-05-29 14:06:39 +02:00
78f30684f8
moderized
...
needs some polishing with respect to array orders
2019-05-29 09:40:56 +02:00
6836a2eae8
better readable
2019-05-29 08:04:01 +02:00
dfc2b47abc
better readable
2019-05-29 08:01:00 +02:00
8ee23b37b2
should not be part of the repo
2019-05-29 07:52:44 +02:00
bb6f54963a
save some memory (avoid copies if not needed)
2019-05-29 07:49:43 +02:00
Martin Diehl