df1f362ed3
it's useful for users to see standard docstrings in magic methods
2022-07-08 18:06:41 +02:00
7082eab366
small test to demonstrate alternative Table init
2022-07-08 18:01:36 +02:00
77fa2a1d93
adjustments to patchfile required for marc2021/2022 spack packages
2022-06-15 15:48:34 +02:00
1328235192
Merge branch 'util_module_import_style' into 'development'
...
util: module visibility
Closes #150
See merge request damask/DAMASK!603
2022-06-13 09:06:04 +00:00
1a44b6e692
white space adjustments
2022-06-10 14:03:43 +02:00
d88a139a41
pyflakes bug causes error without comment
2022-06-10 12:03:50 +02:00
afbafd1d98
util imports need prefix instead of __all__ definition to prevent namespace pollution
2022-06-10 12:00:54 +02:00
bcd3d00960
fixed test
...
this tests should ensure that each Orientation has exactly one symmetrically
equivalent representation. It was not fully correct before and works as expected
after 8fefc46f38
2022-06-10 09:26:15 +02:00
cdd3b44519
using more precise coefficients also in test
...
changes in _rotation.py are just cosmetic
2022-06-09 23:54:56 +02:00
d10516e0b6
fixed typo
2022-06-09 17:23:16 -04:00
8fefc46f38
fixed FZ conditions and tightened tolerance to accommodate higher precision "tfit"
2022-06-09 16:38:13 -04:00
49e40923e5
Merge branch 'numpy_dtype_int_to_int64' into 'development'
...
Prevent windows overflow error when using numpy dtype=int instead of int64
Closes #175
See merge request damask/DAMASK!598
2022-06-07 10:46:50 +00:00
40658a6645
fixed typo in Result.view example
2022-06-05 21:39:06 +00:00
b9214fcc6c
Prevent windows overflow error when using numpy dtype=int instead of int64
2022-06-02 19:40:18 +02:00
b7d807db01
re-added default arguments that got lost in last commit
2022-05-25 09:45:37 -04:00
4746ac890b
Merge branch 'development' into 'empty-table-init'
...
# Conflicts:
# python/damask/_table.py
2022-05-25 13:29:23 +00:00
1dc5e353c4
Merge branch 'sequence-not-iterable' into 'development'
...
Need sequence not iterable
See merge request damask/DAMASK!587
2022-05-25 13:25:25 +00:00
b9cea941cc
simplified
2022-05-23 10:37:57 +02:00
4b4b455b85
mypy does not understand the setter
2022-05-22 10:08:32 +02:00
8039e56882
Merge remote-tracking branch 'origin/development' into typehints_results
2022-05-21 17:46:59 +02:00
570ba8d626
added type: ignore to unrecognized one line if statement
2022-05-20 12:04:34 +02:00
92a4883344
consistent and correct type hinting/documentation for comments
2022-05-19 12:19:55 -04:00
6b6c2548c5
Merge branch 'development' into initial-V_e
2022-05-19 17:03:09 +02:00
556d9d840e
specifying V_e is more natural than F_i
2022-05-19 01:15:17 +02:00
b1b845cb5c
allow init of empty table
2022-05-18 18:30:18 -04:00
164c7b4bc3
clarified sequence of sequences argument type
2022-05-18 09:31:19 -04:00
254524fa38
clarified sequence and iterable argument types
2022-05-18 09:21:32 -04:00
18d862cdb0
Merge branch 'table-vtk-help' into 'development'
...
consistent interface and description
See merge request damask/DAMASK!584
2022-05-17 22:46:58 +00:00
8442f0cdd3
accumulate comments
2022-05-17 16:12:00 -04:00
6c7f2344da
Merge branch 'normalize-to_pole' into 'development'
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normalize to_pole output by default
See merge request damask/DAMASK!578
2022-05-15 21:46:27 +00:00
d83f0acf7f
Merge branch 'rotation-help-polish' into 'development'
...
Rotation help improvements
See merge request damask/DAMASK!575
2022-05-13 09:18:35 +00:00
90c3b3170d
propagate 'normalize' option
2022-05-13 09:54:32 +02:00
12cd19554f
consistent interface and description
2022-05-13 06:28:52 +02:00
c8d48d6eb9
Merge branch 'universal-VTK.set' into 'development'
...
Universal VTK.set
See merge request damask/DAMASK!577
2022-05-13 03:44:11 +00:00
6f7e8491bc
Merge branch 'Marc2022.1' into 'development'
...
Marc2022.1
See merge request damask/DAMASK!579
2022-05-12 20:38:25 +00:00
d18e36ecf0
fixed leftover .add --> .set
2022-05-11 18:54:03 -04:00
236a009e2b
Merge branch 'universal-table.set' into 'development'
...
universal Table.set
See merge request damask/DAMASK!576
2022-05-11 22:30:42 +00:00
648d17d381
renamed .add to .set to be consistent with Table.set
2022-05-11 18:19:10 -04:00
35aa8a9bc6
combine table.add and .set
2022-05-11 09:19:48 -04:00
53c345f4f1
Merge branch 'from_fiber-improvements' into 'development'
...
From fiber improvements
See merge request damask/DAMASK!573
2022-05-11 13:13:31 +00:00
b080e414ae
normalize to_pole output by default
2022-05-11 08:55:55 -04:00
302f020f63
looks better
...
at least on Linux
2022-05-11 09:22:05 +02:00
75272163cd
slight polish of help messages
2022-05-10 15:45:19 -04:00
c9f344758a
use symmetry-aware Miller brackets in Result.add_pole
2022-05-10 15:26:33 -04:00
13f4d77791
polishing
2022-05-10 19:17:59 +02:00
087302a2a4
chnage Marc default version to 2022.1
2022-05-10 09:00:55 +02:00
7e1d44cd63
Merge branch 'fast-YAML-load' into 'development'
...
use libyaml-based loader
See merge request damask/DAMASK!570
2022-05-09 10:58:31 +00:00
f27969caf9
documenting and testing
2022-05-08 23:22:03 +02:00
d7e7750400
Merge remote-tracking branch 'origin/development' into from_fiber-improvements
2022-05-08 22:21:53 +02:00
4d131ec7ba
Merge branch 'structure-improvements' into 'development'
...
Directory layout and filename improvements
See merge request damask/DAMASK!567
2022-05-06 07:33:51 +00:00
60190e8992
modified setup.cfg to automatically detect main package and subpackages
2022-05-02 18:00:21 +02:00
57177303b3
changed string using format in _add_eigenvalue to f-string
2022-05-02 16:40:51 +02:00
a0f019a0cf
result typehints revision
2022-05-02 11:18:35 +02:00
0a42dba453
modified setup.cfg to include solver dir
2022-05-02 10:25:11 +02:00
575de4b89b
mypy does not like an import that can result in two types
2022-04-30 23:15:21 +02:00
8168d43553
use libyaml-based loader
...
factor 10 faster on my laptop
2022-04-30 19:44:50 +02:00
412884ea82
Merge remote-tracking branch 'origin/development' into typehints_results
2022-04-30 00:25:58 +02:00
ec6ecc7ed4
default order
2022-04-30 00:25:49 +02:00
06cef42927
use physical/ISO convention
2022-04-28 15:57:04 +02:00
a0455cadf3
consistently have input in radians
2022-04-28 15:46:19 +02:00
482db1ac3b
[skip ci] renamed _add_generic_pointwise provided_func argument to callback
2022-04-28 09:45:10 +02:00
5c4d481155
common order is theta,phi
2022-04-28 01:33:33 +02:00
793f4e22ba
renamed func argument to _job_pointwise function to provided_func to avoid overlap with func argument of functools.partial function
2022-04-27 17:29:19 +02:00
e0d2859202
better test coverage
2022-04-27 17:25:39 +02:00
8faa5296a1
Merge remote-tracking branch 'origin/fiber_components_noalphabeta' into development
2022-04-27 17:25:13 +02:00
b06a272586
updated commits of original branch to suit current state of development
2022-04-27 16:26:33 +02:00
8f0240c67b
avoid option clash in Orientation.from_fiber_component
2022-04-27 08:59:55 -04:00
45fdd03ecd
main file at root
2022-04-27 06:05:06 +02:00
bb83d20fe9
Merge branch 'development' into structure-improvements
2022-04-27 05:55:19 +02:00
af8003525a
[skip ci] updated version information after successful test of 3.0.0-alpha6-258-gea7c8ef23
2022-04-27 01:01:01 +02:00
51996a707e
[skip ci] updated version information after successful test of 3.0.0-alpha6-252-g59668d291
2022-04-26 11:05:02 +02:00
59668d2910
removed zip_safe = false entry from setup.cfg
2022-04-26 08:32:18 +02:00
b4c6ca64fc
replaced setup.py with setup.cfg file
...
modified .gitlab-ci.yml file to strip away "v" from git describe
<commit> result
2022-04-25 12:00:54 +02:00
7a4097d52b
Marc code belongs to Marc subfolder
2022-04-24 19:03:22 +02:00
1b9c0713cb
symlink was broken
2022-04-24 17:47:26 +02:00
553e16ffa3
[skip ci] updated version information after successful test of v3.0.0-alpha6-249-gd2cf972b2
2022-04-23 20:36:11 +02:00
d2cf972b24
Merge branch 'missing-docstring' into development
2022-04-23 12:04:40 -04:00
6eb8ade40b
[skip ci] updated version information after successful test of v3.0.0-alpha6-236-g1f4ee0813
2022-04-23 08:05:31 +02:00
6ec543d086
merge development
2022-04-22 14:27:03 -04:00
61265ff994
make mypy happy...
2022-04-22 13:39:23 -04:00
1b1eb824c4
better readable
2022-04-22 18:26:52 +02:00
fb6160e7af
Merge remote-tracking branch 'origin/development' into result.incs
2022-04-22 18:24:18 +02:00
5d12ef5b9f
[skip ci] updated version information after successful test of v3.0.0-alpha6-228-g758ad6072
2022-04-22 18:07:42 +02:00
1733c121f3
allow scalar initial_conditions --> on-the-fly broadcasting
2022-04-22 11:29:47 -04:00
197e24ec0d
pass-through ICs when grid remains unaltered
2022-04-21 18:00:58 -04:00
fa58d69cbb
switched "master" property from incs to increments
2022-04-21 17:29:33 -04:00
8e668a565e
[skip ci] updated version information after successful test of v3.0.0-alpha6-223-gd916c7c6b
2022-04-21 21:58:03 +02:00
b5f9d524d7
optional start,end in times_in_range
2022-04-21 15:56:17 -04:00
730bd8ae34
globally defined prefix_inc --> "increment_"
2022-04-21 11:50:24 -04:00
d916c7c6b1
small polishing
2022-04-21 17:32:30 +02:00
d6f2b99199
[skip ci] updated version information after successful test of v3.0.0-alpha6-221-gdff78154a
2022-04-20 10:02:55 +02:00
9e2fcfc9df
[skip ci] updated version information after successful test of v3.0.0-alpha6-210-ge8c1f8453
2022-04-20 05:24:57 +02:00
5d99b152ee
[skip ci] updated version information after successful test of v3.0.0-alpha6-206-g51582b80f
2022-04-15 21:23:03 +02:00
03b9a7679f
[skip ci] updated version information after successful test of v3.0.0-alpha6-202-g87b5097ff
2022-04-13 18:17:32 +02:00
4622380134
[skip ci] updated version information after successful test of v3.0.0-alpha6-197-g39d79c23b
2022-04-12 23:19:28 +02:00
58b67007a9
fixed missing add_strain
2022-04-12 12:02:00 +02:00
8ebd234aaf
[skip ci] updated version information after successful test of v3.0.0-alpha6-194-ga4c396949
2022-04-10 15:18:41 +02:00
700f256b7c
[skip ci] updated version information after successful test of v3.0.0-alpha6-191-gf8d4e3cf5
2022-04-04 13:04:27 +02:00
3bf52d832f
[skip ci] updated version information after successful test of v3.0.0-alpha6-187-gbf7da2c71
2022-04-03 23:33:19 +02:00
84ac426606
additional property shows integer list
2022-04-01 18:04:50 -04:00
4f646f03ee
[skip ci] updated version information after successful test of v3.0.0-alpha6-184-g1f98b04d4
2022-03-27 21:30:58 +02:00
1f98b04d44
Merge branch 'util_open' into 'development'
...
centralize opening of text files
See merge request damask/DAMASK!555
2022-03-27 17:10:31 +00:00
7135b58b99
[skip ci] updated version information after successful test of v3.0.0-alpha6-180-g2dfde6997
2022-03-27 14:00:35 +02:00
0916922423
read Windows/Unix, write Unix line endings
2022-03-27 10:03:47 +02:00
f3cf67d3fa
avoid code duplication and inconsistencies
2022-03-27 09:55:20 +02:00
0d57a13c9b
run tests on Windows
...
XDMF does not work (not sure why, works locally)
2022-03-26 22:16:32 +01:00
bd56a3f2a5
tests might fail on windows
2022-03-26 22:13:54 +01:00
ff3d3afe9e
'/' is separator in h5py even on windows.
...
os.path assumes OS-dependent path separators
2022-03-26 22:09:45 +01:00
c11d38b2ec
avoid blocking pop-up
2022-03-26 22:08:09 +01:00
7f09bbeb08
int is 32 bit on Windows (cause trouble for hybrid_IA)
2022-03-26 22:06:03 +01:00
e9906864cf
ensure Unix line endings
2022-03-26 22:00:08 +01:00
7f23f7b5b6
added IC setter/getter; explicit init of returned Grids
2022-03-24 17:23:37 -04:00
46259d983d
Merge remote-tracking branch 'origin/development' into missing-docstring
2022-03-24 16:19:59 +01:00
ac49365e34
[skip ci] updated version information after successful test of v3.0.0-alpha6-170-gfab34d5c3
2022-03-24 14:46:59 +01:00
fab34d5c3a
Merge branch 'expanduser' into 'development'
...
allow to use '~' in filenames
See merge request damask/DAMASK!552
2022-03-24 11:28:08 +00:00
4b5cc2a7bc
[skip ci] updated version information after successful test of v3.0.0-alpha6-167-gae32d7398
2022-03-23 15:25:23 +01:00
9087d4305a
Merge remote-tracking branch 'origin/development' into missing-docstring
2022-03-20 14:50:43 +01:00
87608b6ed0
missing docstring
2022-03-20 11:55:15 +01:00
5b87fafcae
Merge branch 'consistent-orientation-from' into 'development'
...
consistent "shape" keyword in from_X
Closes #165
See merge request damask/DAMASK!546
2022-03-20 00:00:25 +00:00
135f2e7add
allow to use '~' in filenames
...
no idea how to test, but seems to work
2022-03-19 11:10:22 +01:00
52d595ff62
numpy-compatible shape definition
...
can be scalar or sequence.
Try to avoid to use the term 'rotation' in the documentation and also
don't specify the return type because it will be used by
'damask.Orientation'.
2022-03-19 10:55:03 +01:00
b5d6f2dc83
[skip ci] updated version information after successful test of v3.0.0-alpha6-157-gecb33641d
2022-03-18 16:09:43 +01:00
4972c43b17
return scalar for None, not one-point array
2022-03-18 09:06:48 +01:00
a0b63c029b
Merge remote-tracking branch 'origin/development' into consistent-orientation-from
2022-03-18 08:58:13 +01:00
21e076b0f9
Table.save(with_labels=False) to properly store ANG
2022-03-17 21:23:57 -04:00
1147b5b742
[skip ci] updated version information after successful test of v3.0.0-alpha6-154-g9d134b87b
2022-03-15 17:30:19 +01:00
af4e8c4975
[skip ci] updated version information after successful test of v3.0.0-alpha6-151-g92bf10cad
2022-03-15 12:20:03 +01:00
4f09bbc715
documented return type for from_fiber/spherical_component
2022-03-14 16:32:52 -04:00
378b8b2396
use consistent "shape" keyword when shape not clear from input data
2022-03-14 16:24:05 -04:00
a925a99f43
[skip ci] updated version information after successful test of v3.0.0-alpha6-146-g3618e36ab
2022-03-13 10:05:54 +01:00
cf49310df7
[skip ci] updated version information after successful test of v3.0.0-alpha6-140-g527c1c222
2022-03-12 16:13:32 +01:00
527c1c2225
Merge remote-tracking branch 'origin/vtk-add-label-data-table' into development
2022-03-12 14:10:30 +01:00
746e02db6b
[skip ci] updated version information after successful test of v3.0.0-alpha6-137-g00ef0c6b6
2022-03-12 13:21:25 +01:00
56c33b8a5c
flipped VTK.add to use (label,data) to be consistent with other functionality
2022-03-11 20:07:18 -05:00
d5a0933978
[skip ci] updated version information after successful test of v3.0.0-alpha6-134-g0d22cfb83
2022-03-12 01:45:01 +01:00
0d22cfb83d
table.__init__ now has common order of arguments (label, data)
2022-03-11 22:31:35 +01:00
c5c2763e1f
several improvements
...
- DataFrame.append is deprecated
- restored special case `None` for Grid.vicinity_offset and Grid.clean
- sorted procedures of Grid according to functionality
2022-03-11 22:22:12 +01:00
1d0d082075
[skip ci] updated version information after successful test of v3.0.0-alpha6-126-g8d9d13c15
2022-03-10 09:56:36 +01:00
d1c6434bb2
corner case: empty set
...
will be checked by extra test
2022-03-10 07:37:46 +01:00
4f6d9aa4b6
adjusted faulty test
2022-03-09 19:01:45 -05:00
f13a4c82da
grid.clean/vicinity now uses ball neighborhood; lots of polishing
2022-03-09 18:26:52 -05:00
3d9ac817bb
shorter code
2022-03-09 18:24:18 -05:00
98033e41dc
test only use modern Result.view API
2022-03-09 20:31:19 +01:00
b916712946
Merge remote-tracking branch 'origin/keyword-view' into polishing
2022-03-09 15:36:00 +01:00
4c941c608f
better names and description
2022-03-09 15:35:36 +01:00
c2453c56f1
Merge remote-tracking branch 'origin/development' into polishing
2022-03-09 15:22:22 +01:00
05541736a6
clearer message
2022-03-09 15:18:18 +01:00
2b27388c05
[skip ci] updated version information after successful test of v3.0.0-alpha6-88-g2162442e0
2022-03-09 12:08:17 +01:00
c4a7c0096a
give default directly
...
only Colormap object caused problem (tab completion triggered '__repr__'
which means showing colormap in maplotlib window
2022-03-08 22:43:54 +01:00
73f01c07d0
clarified colormap default; accept string as colormap name
2022-03-08 09:31:08 -05:00
20e056e26a
consistent interface also for internal functionality
...
allows to change multiple 'what's at the same time
2022-03-07 13:10:15 +01:00
fe8e55e470
KeyError more sensible here
2022-03-07 11:28:17 +01:00
bc020a9580
correct names
2022-03-07 10:40:28 +01:00
4e9e55f3ac
Merge remote-tracking branch 'origin/development' into separate-vtk
2022-03-07 10:33:28 +01:00
445d5ec720
propagate signals to running commands
...
otherwise, we have long running processes when GitLab terminates jobs in
a pipeline
2022-03-06 21:11:19 +01:00
425d148ea8
mypy-safe
2022-03-06 19:37:46 +01:00
01e777bc58
[skip ci] updated version information after successful test of v3.0.0-alpha6-73-g0b8adb2aa
2022-03-06 19:23:42 +01:00
f54849f495
enhance grid to store initial conditions
2022-03-06 00:54:42 +01:00
d7ba853859
use None for no selection, empty list is 'nothing'
2022-03-05 20:37:47 +01:00
a77b63718c
remove deprecated interface options
2022-03-04 20:27:32 +01:00
bafc45d259
guide users
2022-03-04 19:07:23 +01:00
161e4b6815
testing new functionality
2022-03-04 10:57:49 +01:00
03912b0a03
Merge remote-tracking branch 'origin/development' into polishing
2022-03-04 03:44:36 +01:00
48544641ca
[skip ci] updated version information after successful test of v3.0.0-alpha6-71-g3bc1a5eda
2022-03-01 21:45:28 +01:00
3bc1a5eda4
Merge branch 'python-vtk-improvements' into 'development'
...
Resolve issues in #149
See merge request damask/DAMASK!535
2022-03-01 08:10:39 +00:00
dd68aad83b
not used
2022-02-28 19:03:56 +01:00
f9e04bc4cb
unifying interface
...
same same for same functionality, allow user to specify single integer
for convenience
2022-02-28 16:14:40 +01:00
3c4faf972e
[skip ci] updated version information after successful test of v3.0.0-alpha6-40-gc4fdbf88c
2022-02-28 00:26:54 +01:00
c7b512a94e
support the user
2022-02-26 17:40:12 +01:00
a314e63ed2
homogenize: (material index, material ID) -> material ID
...
mutable describes meaning of parameter better
2022-02-26 14:22:00 +01:00
bee3f08d77
test __repr__ functionality with str()
2022-02-24 19:15:28 -05:00
fd52c18488
remove debug print statements in tests
2022-02-24 18:35:48 -05:00
6d50066a04
[skip ci] updated version information after successful test of v3.0.0-alpha6-27-gf4a15f579
2022-02-23 18:55:29 +01:00
320ab70270
Merge branch 'development' into 'python-vtk-improvements'
...
# Conflicts:
# python/damask/_vtk.py
2022-02-23 14:20:52 +00:00
08a96f64f5
make mypy happy...
2022-02-23 09:12:55 -05:00
f4a15f5796
Merge branch 'consistent-uppercase-in-exceptions' into 'development'
...
Consistent formatting of raised messages
See merge request damask/DAMASK!533
2022-02-23 13:55:14 +00:00
5882a8560c
shortened __repr__ code
2022-02-23 08:38:03 -05:00
77e57a268c
unified.
...
the default python description "Return repr(self)." is pretty useless,
so better agree on a DAMASK standard
2022-02-23 07:21:30 +01:00
ba4a99ebe6
[skip ci] updated version information after successful test of v3.0.0-alpha6-23-gf944975ac
2022-02-23 06:57:12 +01:00
59755c67ce
human-readable reporting
2022-02-23 06:49:38 +01:00
f944975ac5
Merge branch 'symops-in-crystal' into 'development'
...
symmetry_operations belong to Crystal
See merge request damask/DAMASK!534
2022-02-23 00:54:21 +00:00
a9d4e89250
Merge branch 'crystal-examples' into 'development'
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some guidance for users
See merge request damask/DAMASK!532
2022-02-22 19:23:02 +00:00
ae2aa096fb
fixed flatten order=F; cividis default.
2022-02-22 12:23:29 -05:00
661b7fb602
slight polish
2022-02-22 10:56:12 -05:00
47dcd4bd41
follow Python exception message convention of lower-case
2022-02-22 10:42:05 -05:00
6a4ad7ff75
moved symmetry_operations from Orientation to Crystal
2022-02-22 10:12:03 -05:00
aeb0e527ec
Consistent formatting of raised messages
2022-02-22 09:46:12 -05:00
3d554e40b9
clarify real/reciprocal space coordinates
2022-02-22 09:15:32 -05:00
744f5755ff
[skip ci] updated version information after successful test of v3.0.0-alpha6-14-g3657b2316
2022-02-22 14:44:56 +01:00
be11da2284
testing new functionality
2022-02-22 14:00:36 +01:00
f6de182eb6
get information about dataset labels
2022-02-22 08:08:41 +01:00
e8a4f06634
out of place behavior for VTK
2022-02-22 07:49:44 +01:00
3a078db6f1
some guidance for users
2022-02-22 06:40:17 +01:00
d1620d9268
[skip ci] updated version information after successful test of v3.0.0-alpha6-4-gca6a3e786
2022-02-21 12:46:52 +01:00
c975a5b437
needed for out of place behavior
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pickle/deepcopy does not work
2022-02-21 12:12:17 +01:00
22fa9c9772
add scalebar
2022-02-21 11:19:53 +01:00
45dc9cf7a6
show scalar data, use to show material of grid
2022-02-21 08:09:55 +01:00
9fe51686e5
allow to use '~' in path
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not sure how to test, i.e. how to create a fixture to have a fake home
2022-02-21 07:19:05 +01:00
9ba0a4bd86
[skip ci] updated version information after successful test of v3.0.0-alpha6-1-g5cc64fc95
2022-02-19 14:56:41 +01:00
fe2ab947ec
somehow "Sequence" was missing from import
2022-02-18 14:50:28 -05:00
d.mentock