it's useful for users to see standard docstrings in magic methods
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@ -48,7 +48,12 @@ class Colormap(mpl.colors.ListedColormap):
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def __eq__(self,
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other: object) -> bool:
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"""Test equality of colormaps."""
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"""
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Return self==other.
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Test equality of colormaps.
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"""
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if not isinstance(other, Colormap):
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return NotImplemented
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return len(self.colors) == len(other.colors) \
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@ -56,31 +61,61 @@ class Colormap(mpl.colors.ListedColormap):
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def __add__(self,
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other: 'Colormap') -> 'Colormap':
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"""Concatenate."""
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"""
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Return self+other.
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Concatenate.
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"""
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return Colormap(np.vstack((self.colors,other.colors)),
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f'{self.name}+{other.name}')
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def __iadd__(self,
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other: 'Colormap') -> 'Colormap':
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"""Concatenate (in-place)."""
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"""
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Return self+=other.
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Concatenate (in-place).
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"""
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return self.__add__(other)
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def __mul__(self,
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factor: int) -> 'Colormap':
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"""Repeat."""
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"""
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Return self*other.
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Repeat.
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"""
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return Colormap(np.vstack([self.colors]*factor),f'{self.name}*{factor}')
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def __imul__(self,
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factor: int) -> 'Colormap':
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"""Repeat (in-place)."""
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"""
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Return self*=other.
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Repeat (in-place).
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"""
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return self.__mul__(factor)
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def __invert__(self) -> 'Colormap':
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"""Reverse."""
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"""
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Return ~self.
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Return reverse of self
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"""
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return self.reversed()
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def __repr__(self) -> str:
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"""Show as matplotlib figure."""
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"""
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Return repr(self).
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Show as matplotlib figure.
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"""
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fig = plt.figure(self.name,figsize=(5,.5))
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ax1 = fig.add_axes([0, 0, 1, 1])
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ax1.set_axis_off()
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@ -64,7 +64,12 @@ class Config(dict):
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super().__init__(**kwargs)
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def __repr__(self) -> str:
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"""Show as in file."""
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"""
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Return repr(self).
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Show as in file.
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"""
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output = StringIO()
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self.save(output)
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output.seek(0)
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@ -72,7 +77,12 @@ class Config(dict):
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def __copy__(self: MyType) -> MyType:
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"""Create deep copy."""
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"""
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Return deepcopy(self).
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Create deep copy.
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"""
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return copy.deepcopy(self)
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copy = __copy__
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@ -81,6 +91,8 @@ class Config(dict):
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def __or__(self: MyType,
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other) -> MyType:
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"""
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Return self|other.
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Update configuration with contents of other.
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Parameters
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@ -105,7 +117,12 @@ class Config(dict):
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def __ior__(self: MyType,
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other) -> MyType:
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"""Update configuration with contents of other."""
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"""
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Return self|=other.
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Update configuration with contents of other.
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"""
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return self.__or__(other)
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@ -403,7 +403,12 @@ class Crystal():
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def __repr__(self):
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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family = f'Crystal family: {self.family}'
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return family if self.lattice is None else \
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util.srepr([family,
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@ -415,6 +420,8 @@ class Crystal():
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def __eq__(self,
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other: object) -> bool:
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"""
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Return self==other.
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Equal to other.
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Parameters
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@ -62,7 +62,12 @@ class Grid:
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self.comments = [] if comments_ is None else [str(c) for c in comments_]
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def __repr__(self) -> str:
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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mat_min = np.nanmin(self.material)
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mat_max = np.nanmax(self.material)
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mat_N = self.N_materials
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@ -76,7 +81,12 @@ class Grid:
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def __copy__(self) -> 'Grid':
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"""Create deep copy."""
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"""
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Return deepcopy(self).
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Create deep copy.
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"""
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return copy.deepcopy(self)
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copy = __copy__
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@ -85,6 +95,8 @@ class Grid:
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def __eq__(self,
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other: object) -> bool:
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"""
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Return self==other.
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Test equality of other.
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Parameters
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@ -120,14 +120,24 @@ class Orientation(Rotation,Crystal):
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def __repr__(self) -> str:
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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return util.srepr([Crystal.__repr__(self),
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Rotation.__repr__(self)])
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def __copy__(self: MyType,
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rotation: Union[FloatSequence, Rotation] = None) -> MyType:
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"""Create deep copy."""
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"""
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Return deepcopy(self).
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Create deep copy.
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"""
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dup = copy.deepcopy(self)
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if rotation is not None:
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dup.quaternion = Rotation(rotation).quaternion
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@ -140,6 +150,8 @@ class Orientation(Rotation,Crystal):
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def __eq__(self,
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other: object) -> bool:
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"""
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Return self==other.
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Equal to other.
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Parameters
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@ -158,6 +170,8 @@ class Orientation(Rotation,Crystal):
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def __ne__(self,
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other: object) -> bool:
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"""
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Return self!=other.
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Not equal to other.
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Parameters
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@ -152,14 +152,24 @@ class Result:
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def __copy__(self) -> "Result":
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"""Create deep copy."""
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"""
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Return deepcopy(self).
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Create deep copy.
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"""
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return copy.deepcopy(self)
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copy = __copy__
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def __repr__(self) -> str:
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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with h5py.File(self.fname,'r') as f:
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header = [f'Created by {f.attrs["creator"]}',
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f' on {f.attrs["created"]}',
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@ -88,14 +88,24 @@ class Rotation:
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def __repr__(self) -> str:
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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return f'Quaternion{" " if self.quaternion.shape == (4,) else "s of shape "+str(self.quaternion.shape[:-1])+chr(10)}'\
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+ str(self.quaternion)
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def __copy__(self: MyType,
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rotation: Union[FloatSequence, 'Rotation'] = None) -> MyType:
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"""Create deep copy."""
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"""
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Return deepcopy(self).
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Create deep copy.
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"""
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dup = copy.deepcopy(self)
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if rotation is not None:
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dup.quaternion = Rotation(rotation).quaternion
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def __getitem__(self,
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item: Union[Tuple[int], int, bool, np.bool_, np.ndarray]):
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"""Return slice according to item."""
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"""
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Return x[y].
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Return slice according to item.
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"""
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return self.copy() if self.shape == () else \
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self.copy(self.quaternion[item+(slice(None),)] if isinstance(item,tuple) else self.quaternion[item])
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def __eq__(self,
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other: object) -> bool:
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"""
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Return self==other.
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Equal to other.
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Parameters
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@ -130,6 +147,8 @@ class Rotation:
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def __ne__(self,
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other: object) -> bool:
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"""
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Return self!=other.
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Not equal to other.
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Parameters
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def __len__(self) -> int:
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"""Length of leading/leftmost dimension of array."""
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"""
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Return len(self).
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Length of leading/leftmost dimension of array.
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"""
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return 0 if self.shape == () else self.shape[0]
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def __invert__(self: MyType) -> MyType:
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"""Inverse rotation (backward rotation)."""
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"""
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Return ~self.
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Inverse rotation (backward rotation).
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"""
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dup = self.copy()
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dup.quaternion[...,1:] *= -1
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return dup
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@ -228,6 +257,8 @@ class Rotation:
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def __pow__(self: MyType,
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exp: Union[float, int]) -> MyType:
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"""
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Return self**exp.
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Perform the rotation 'exp' times.
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Parameters
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@ -243,6 +274,8 @@ class Rotation:
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def __ipow__(self: MyType,
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exp: Union[float, int]) -> MyType:
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"""
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Return self**=exp.
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Perform the rotation 'exp' times (in-place).
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Parameters
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@ -257,6 +290,8 @@ class Rotation:
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def __mul__(self: MyType,
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other: MyType) -> MyType:
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"""
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Return self*other.
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Compose with other.
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Parameters
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@ -284,6 +319,8 @@ class Rotation:
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def __imul__(self: MyType,
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other: MyType) -> MyType:
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"""
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Return self*=other.
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Compose with other (in-place).
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Parameters
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@ -298,6 +335,8 @@ class Rotation:
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def __truediv__(self: MyType,
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other: MyType) -> MyType:
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"""
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Return self/other.
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Compose with inverse of other.
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Parameters
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@ -319,6 +358,8 @@ class Rotation:
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def __itruediv__(self: MyType,
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other: MyType) -> MyType:
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"""
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Return self/=other.
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Compose with inverse of other (in-place).
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Parameters
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@ -333,6 +374,8 @@ class Rotation:
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def __matmul__(self,
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other: np.ndarray) -> np.ndarray:
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"""
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Return self@other.
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Rotate vector, second order tensor, or fourth order tensor.
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Parameters
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@ -37,7 +37,12 @@ class Table:
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def __repr__(self) -> str:
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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self._relabel('shapes')
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data_repr = self.data.__repr__()
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self._relabel('uniform')
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@ -46,7 +51,12 @@ class Table:
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def __eq__(self,
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other: object) -> bool:
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"""Compare to other Table."""
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"""
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Return self==other.
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Compare to other Table.
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"""
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return NotImplemented if not isinstance(other,Table) else \
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self.shapes == other.shapes and self.data.equals(other.data)
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def __getitem__(self,
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item: Union[slice, Tuple[slice, ...]]) -> 'Table':
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"""
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Return x[y].
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Slice the Table according to item.
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Parameters
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@ -102,12 +114,22 @@ class Table:
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def __len__(self) -> int:
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"""Number of rows."""
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"""
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Return len(self).
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Number of rows.
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"""
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return len(self.data)
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def __copy__(self) -> 'Table':
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"""Create deep copy."""
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"""
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Return deepcopy(self).
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Create deep copy.
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"""
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return copy.deepcopy(self)
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copy = __copy__
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@ -39,7 +39,12 @@ class VTK:
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def __repr__(self) -> str:
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"""Give short human-readable summary."""
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"""
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Return repr(self).
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Give short human-readable summary.
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"""
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info = [self.vtk_data.__vtkname__]
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for data in ['Cell Data', 'Point Data']:
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@ -54,6 +59,8 @@ class VTK:
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def __eq__(self,
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other: object) -> bool:
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"""
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Return self==other.
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Equal to other.
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Parameters
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