Commit Graph

1475 Commits

Author SHA1 Message Date
Martin Diehl 35ca1ffb0a consistent copy functionality 2021-01-03 12:03:40 +01:00
Martin Diehl 6fe1ff8e39 fixed test for rodrigues parametrization
for angle close to 180deg, the sign of the axis does not matter
2021-01-03 11:50:45 +01:00
Philip Eisenlohr da62daf15d added test for appending rotation lists; better check for type==list 2020-12-28 12:26:09 -05:00
Philip Eisenlohr 4796afdd92 fix for broken representation of no-rotation orientations and averaging weights 2020-12-28 12:10:21 -05:00
Philip Eisenlohr d8b57680ec raise NotImplemented when using R*b instead of R@b 2020-12-21 15:47:18 -05:00
Sharan Roongta 6cc78cb41e Merge branch 'misc-improvements' into 'development'
Misc improvements

See merge request damask/DAMASK!302
2020-12-18 15:19:04 +01:00
Martin Diehl 35f9861818 Fortran standard is 2018
will not work for older compilers
2020-12-18 15:19:04 +01:00
Martin Diehl 5fb0e4908b Examples reflect actual behavior 2020-12-18 07:09:05 +01:00
Philip Eisenlohr 403ac693da need to pass init argument to dict superclass 2020-12-17 18:08:55 -05:00
Philip Eisenlohr e11be7e600 preinitialize a ConfigMaterial object with 'constituents','homogenization','phase' keys 2020-12-17 10:49:33 -05:00
Martin Diehl 2dd520b4a2 P_aim should be independent from P_av
P_av is not defined after restart or cutback. Restart with change of
load case is probably still an issue
2020-12-15 08:06:50 +01:00
Martin Diehl aad123f41b Merge branch 'table-getitem' into development 2020-12-12 19:58:42 +01:00
Philip Eisenlohr 36e4042f0b removed "where" method from Table class 2020-12-11 19:31:19 -05:00
Martin Diehl 2e28bc127a better message in case that GUI is not possible 2020-12-10 23:44:54 +01:00
Martin Diehl a881e6e57a Merge remote-tracking branch 'origin/development' into misc-improvements 2020-12-10 23:41:59 +01:00
Martin Diehl 32c2de6b91 Ensuring regular spacing for grid 2020-12-10 22:47:30 +01:00
Martin Diehl 4286fc3b82 Merge branch 'development' into misc-improvements 2020-12-10 20:21:00 +01:00
Martin Diehl 9b6f5ba9c6 Merge branch 'development' into compressed-hdf5 2020-12-10 00:23:22 +01:00
Martin Diehl de1708b20a missing renames + better help 2020-12-08 00:36:41 +01:00
Martin Diehl 78192ef3fd clearer naming + better comments, thanks to @p.eisenlohr 2020-12-07 17:49:37 +01:00
Martin Diehl 429b84004d more filters
- shuffle: significanlty better compression
- Fletcher32: checksum to detect errors

computational overhead is very small
2020-12-06 19:57:00 +01:00
Martin Diehl 52e3fb50bc compress.
Datasets are chunked along first timension. Chunk size (1MB for real) is
probably not optimal
2020-12-06 11:44:52 +01:00
Martin Diehl 000de75617 write orientation as plain array, not derived type 2020-12-06 08:36:16 +01:00
Martin Diehl c80e1c5420 less confusing in the standard case, more helpful in the special case 2020-12-05 10:47:42 +01:00
Martin Diehl ed286ee09f Merge branch 'rename-grid-2' into misc-improvements 2020-12-05 09:50:46 +01:00
Martin Diehl 171d642dbd rename: Geom -> Grid 2020-12-04 07:50:47 +01:00
Martin Diehl 0fdefa5e78 renames:
after the rename of "grid" to "cell", the name cell should not be used
for the coordinates of the cell centers. In agreement with the names
x_p/u_p for point positions/displacements, now the "point" is used to
refer to the materialpoints (i.e. cell centers)

Additionally, "_node"/"_point" are now suffixes to
"coordinates"/"displacements".

Finally, "coords" is renamed to "coordinates"
2020-12-03 23:59:37 +01:00
Martin Diehl ac0a20696c rename: grid -> cells 2020-12-03 22:16:34 +01:00
Philip Eisenlohr ccf1a849fa Merge branch 'ShowGrainBoundaries' into 'development'
Show grain boundaries

See merge request damask/DAMASK!297
2020-12-03 17:13:15 +01:00
Philip Eisenlohr 4877334986 added getitem and where functionality to Table 2020-12-02 19:25:54 -05:00
Philip Eisenlohr 97df1ab9b3 reinstated write functionality 2020-12-02 13:04:56 -05:00
Martin Diehl d3a5979d25 meaningful result 2020-12-02 14:45:47 +01:00
Martin Diehl c880052250 avoid evil eval 2020-12-02 14:37:44 +01:00
Martin Diehl aa8f30d746 Merge branch 'development' into ShowGrainBoundaries 2020-12-02 12:50:04 +01:00
Martin Diehl 1c2cdbd5a1 support of all standard numpy types
+ tests
2020-11-30 12:33:21 +01:00
Martin Diehl 813ef927c4 consistent with "save_XDMF" (capitalized) 2020-11-30 09:28:46 +01:00
Martin Diehl 4d2bf37193 Merge branch 'lattice-structure-rename' into ShowGrainBoundaries 2020-11-29 20:53:58 +01:00
Martin Diehl 1d05edd7b3 fixes:
- need to get crystal structure as attribute in test (generic function
  was removed, because the crystal structure is in general not the same
  over the whole domain)
- consistent sorting of attributes
2020-11-29 09:06:47 +01:00
Martin Diehl f48f5cb0e8 bugfix/better readable 2020-11-29 08:58:48 +01:00
Martin Diehl c712332e87 using consistent names for Bravais lattice in Fortran and Python 2020-11-28 22:38:12 +01:00
Martin Diehl a8da1e5ed9 Paraview 5.9 supports datasets of arbitrary length in XDMF 2020-11-27 22:57:15 +01:00
Martin Diehl 3c1f1af009 more then one direction in file 2020-11-27 20:16:06 +01:00
f.basile c2be41b9f6 remove import vtk because unused 2020-11-25 12:53:29 +01:00
f.basile 31df4c04c8 added test 2020-11-25 12:51:52 +01:00
f.basile eb085958f8 polishing 2020-11-25 11:32:07 +01:00
f.basile cd58278a01 returns vtk object 2020-11-25 10:39:58 +01:00
f.basile 7abc32b09c alternative for if d_s== , not sure it improves the previous 2020-11-24 19:59:46 +01:00
f.basile c8b1f8d9f1 shortest possible way i found to include directions in an elegant way 2020-11-24 17:49:58 +01:00
Francisco Jose Gallardo Basile 030062d293 Merge branch 'unit-in-vtk' into 'development'
Unit in vtk

See merge request damask/DAMASK!288
2020-11-24 16:21:01 +01:00
Martin Diehl 7fa98ef084 DEcode bytes into str 2020-11-23 20:17:04 +01:00
Martin Diehl 5ab2847b36 polishing 2020-11-23 20:06:34 +01:00
Martin Diehl cbe8160e13 Merge remote-tracking branch 'origin/development' into vector-mechanics 2020-11-23 19:55:34 +01:00
Martin Diehl f85dba2835 small polishing 2020-11-23 19:43:19 +01:00
Martin Diehl 287d44c5df Merge remote-tracking branch 'origin/development' into unit-in-vtk 2020-11-23 19:19:02 +01:00
Franz Roters 7356330cf6 Merge remote-tracking branch 'origin/new_names_result' into development 2020-11-23 11:49:15 +01:00
Sharan Roongta c58f9f23a1 read old version while resolving merge conflicts 2020-11-22 14:32:32 +01:00
Sharan Roongta 24fabdec22 Merge branch 'development' into vector-mechanics 2020-11-22 12:02:29 +01:00
Martin Diehl 2de3a6a205 fits better to stretch_left/right 2020-11-19 22:46:52 +01:00
Martin Diehl a87596cefc return rotation type (ensures proper rotation) 2020-11-19 22:36:19 +01:00
Philip Eisenlohr 662a033d91 adapted to VTR geom files 2020-11-19 14:26:15 -05:00
Philip Eisenlohr a82b1adc14 Merge branch 'geom-load-ASCII-autoshift' of magit1.mpie.de:damask/DAMASK into geom-load-ASCII-autoshift 2020-11-19 12:24:09 -05:00
Martin Diehl a4b5c2a537 shorter (but still self-explanatory) name 2020-11-19 15:20:44 +01:00
Martin Diehl 6e5cb60132 general tensor functionality 2020-11-19 15:16:01 +01:00
Martin Diehl 894a8de9f9 avoid name clash: as_Rodrigues_vector(vector = ...) 2020-11-19 14:31:14 +01:00
Martin Diehl 1c07152b96 sorted alphabetically 2020-11-19 14:05:59 +01:00
Martin Diehl 20d0732b2e output unit to XDMF/vtk 2020-11-19 13:45:40 +01:00
Martin Diehl af3a87b197 adjust to new auto-convert of 1-based geom files 2020-11-19 11:34:55 +01:00
Martin Diehl 5a5dd24687 removed aliases 2020-11-19 10:50:14 +01:00
Martin Diehl 903c185ee6 distinguish 'file not found' and 'invalid file' 2020-11-19 10:39:41 +01:00
Martin Diehl c74e57f225 vtk error handling is not very helpful 2020-11-19 09:59:39 +01:00
Martin Diehl 96826dca73 Geom.load_ASCII now auto-shifts material indices 2020-11-19 09:40:19 +01:00
Philip Eisenlohr cb22c34db2 Geom.load_ASCII now auto-shifts material indices 2020-11-18 18:25:25 -05:00
Martin Diehl b9b26cb2cc output results for all constituents 2020-11-18 23:36:02 +01:00
Martin Diehl 5359e05fd3 always merge homogenization results 2020-11-18 23:17:12 +01:00
Martin Diehl b885e38b3f better readable 2020-11-18 22:12:23 +01:00
Martin Diehl 4bf802a28e fixed documentation 2020-11-18 21:51:37 +01:00
Martin Diehl 843d7d8cac Merge remote-tracking branch 'origin/development' into new_names_result 2020-11-18 21:37:52 +01:00
Martin Diehl 7352431143 vectorized 2020-11-18 20:10:04 +01:00
Martin Diehl 564ee6c96a make uvw/hkl keyword-only arguments
avoid to prefer one over the other, since they are mutually exclusive
2020-11-18 16:45:53 +01:00
Martin Diehl c60d9cde2a merge 'mechanics' datasets
was like that for 'generic'. Needs detailed discussion in future
2020-11-18 15:52:55 +01:00
Martin Diehl 838a4ea592 [skip ci] fix for scalar values 2020-11-18 14:57:32 +01:00
Martin Diehl 870c0f7aca removed aliases
required bump of DADF5 version
2020-11-18 14:53:11 +01:00
Martin Diehl 1c9028d0b1 simplified 2020-11-18 14:01:52 +01:00
Martin Diehl 89c748fdf1 Merge remote-tracking branch 'origin/development' into vector-mechanics 2020-11-18 13:55:05 +01:00
Martin Diehl 9a1e8e3c38 for the transition period 2020-11-18 13:28:53 +01:00
f.basile 7291b95055 avoid pyflake for blank line 6 final 2020-11-18 12:29:10 +01:00
f.basile ee5822b721 avoid pyflake for blank line 5 2020-11-18 12:25:08 +01:00
f.basile 4dbfad74cb avoid pyflake for blank line 4 2020-11-18 12:24:17 +01:00
f.basile eda3837874 avoid pyflake for blank line 3 2020-11-18 12:21:09 +01:00
f.basile c681101136 avoid pyflake for blank line 2 2020-11-18 12:19:47 +01:00
f.basile 33aa888fc7 avoid pyflake for blank line 2020-11-18 12:17:05 +01:00
f.basile e8f82d52cc fix bug 2020-11-18 12:16:08 +01:00
f.basile be206d28b3 vectorized and more options 2020-11-18 12:14:12 +01:00
Martin Diehl 6bedd84759 self-explanatory names 2020-11-18 08:15:04 +01:00
Martin Diehl cd8434b991 Merge remote-tracking branch 'origin/development' into python-improvements 2020-11-16 22:57:49 +01:00
Sharan Roongta c16ad845bc Merge branch 'modernize-testing' into 'development'
Modernize testing

See merge request damask/DAMASK!280
2020-11-16 20:10:38 +01:00
Martin Diehl a8fec922d5 show name in title 2020-11-16 17:25:13 +01:00
Philip Eisenlohr 5a53f8743b added to docstring 2020-11-16 10:44:33 -05:00
Philip Eisenlohr fa25a13264 fixed typo 2020-11-16 10:34:49 -05:00
Philip Eisenlohr de20e6b35d code shortening; list_predefined() --> property "predefined" 2020-11-16 10:23:26 -05:00
Martin Diehl 5ebde607a2 einsum simplifications 2020-11-16 07:43:20 +01:00
Martin Diehl 9b9d83d93c adding '_tensor' not needed 2020-11-16 01:15:39 +01:00
Martin Diehl b893967b68 more systematic names and extended docstrings 2020-11-16 01:02:36 +01:00
Martin Diehl 6f81f5278d separating general tensor math from mechanics operations 2020-11-16 00:13:34 +01:00
Martin Diehl b3955573f6 using new tests 2020-11-15 22:39:47 +01:00
Martin Diehl fd8743af5e clearly distinguish seeds for tessellation and seeds for RNG 2020-11-15 13:49:17 +01:00
Martin Diehl 1541ac0add more intuitive use 2020-11-15 12:38:54 +01:00
Martin Diehl 01d84c1477 testing also functions with graphical output 2020-11-15 11:49:52 +01:00
Martin Diehl 15af12bbb4 __ne__ is automatically set to !__eq__, __neq__ has no special meaning 2020-11-15 11:38:26 +01:00
Martin Diehl 51e5dda702 documentation + consistent string formatting 2020-11-15 10:54:20 +01:00
Martin Diehl 05c1007add documentation improvments + acceptance of lists
example code at respective function, no space in 'or' variable names
(sphinx cannot handle this)
2020-11-15 10:31:01 +01:00
Martin Diehl 1eb9d494c7 not specific to Orientation class 2020-11-14 19:51:15 +01:00
Martin Diehl 149fce0a7e increase test coverage 2020-11-14 19:42:52 +01:00
Martin Diehl 764aacf2a1 increasing test coverage 2020-11-14 17:54:47 +01:00
Martin Diehl 9eb4e2d0de corrected handling of scalar/array arguments
+ more tests
+ corrected handling of numpy types
2020-11-14 17:26:38 +01:00
Martin Diehl 6529613726 Merge remote-tracking branch 'origin/development' into vector-mechanics 2020-11-14 15:10:52 +01:00
Martin Diehl bacfe9f462 Merge branch 'fix-add_primitive-rotation' into 'development'
Avoids coordinate normalization _before_ rotation

See merge request damask/DAMASK!276
2020-11-13 14:11:54 +01:00
Martin Diehl 7b7b449877 testing fixed behavior 2020-11-13 06:50:57 +01:00
Philip Eisenlohr b3e8b85d25 normalizing coordinates _before_ rotation causes wrong primitive shape for non-cubic VEs 2020-11-12 18:34:29 -05:00
Martin Diehl e15678e7a4 consistent handling of comments 2020-11-12 21:31:09 +01:00
Martin Diehl 8429a9d695 Merge remote-tracking branch 'origin/development' into modularize-mech 2020-11-11 07:04:23 +01:00
Martin Diehl e90c20ccd6 Merge remote-tracking branch 'origin/geom-attributes-as-checked-properties' into development 2020-11-10 14:54:40 +01:00
Martin Diehl 5926f84851 WIP: refactoring Orientation=Symmetry+Rotation, Lattice=subclass of Sym, and Crystal=Lattice+Rotation 2020-11-09 21:20:56 +01:00
Philip Eisenlohr f105631015 redefined attributes material,size,origin,comments as properties; enhanced help/descriptions 2020-11-08 12:11:30 -05:00
Sharan Roongta 287d56fc3d consistent with new output names 2020-11-08 16:01:11 +01:00
Sharan Roongta 7d4163e8a9 new format of material.yaml 2020-11-08 15:57:06 +01:00
Martin Diehl 03a68248b5 polishing 2020-11-06 13:25:00 +01:00
Martin Diehl bbaeeb02da Merge remote-tracking branch 'origin/misc-improvements' into h5py3 2020-11-06 13:19:47 +01:00
Martin Diehl 58a5d2666c ensure correct Mises mode 2020-11-06 00:10:46 +01:00
Martin Diehl 4ccd068d3b catch error in case of exisiting dataset 2020-11-05 23:00:56 +01:00
Martin Diehl e649fb195f update to use variable-length strings 2020-11-05 22:34:41 +01:00
Martin Diehl 30938a8278 correct order (brackets) 2020-11-05 21:38:00 +01:00
Martin Diehl e26bb962c8 encode from str to bytes 2020-11-05 21:19:49 +01:00
Martin Diehl 68d384bbdd bugfix: missing rename 2020-11-05 21:14:02 +01:00
Martin Diehl a416f5ed5b encode/decode for h5py3 not needed anymore
attribute values with variable-length strings will be interpreted as
str, not bytes
2020-11-05 16:13:29 +01:00
Martin Diehl 708c83dcf1 polishing 2020-11-05 07:15:59 +01:00
Martin Diehl 1fcf9cb721 don't compute silently the wrong von Mises kind
and allow the user to set it explicitly
2020-11-05 05:48:12 +01:00
Martin Diehl 7341b9830a h5py v 3.x handles strings differently 2020-11-05 05:39:45 +01:00
Martin Diehl 01af348cd9 symmetric behavior load/save
default name reflects fact that material.yaml has a fixed name
2020-11-04 21:14:08 +01:00
Martin Diehl ae959b9cc2 allow '.' in filenames 2020-11-04 18:08:04 +01:00
Philip Eisenlohr eaceb16203 added +1 to nanmax(material) as auto offset, now consistent with help and intention... 2020-11-03 17:43:57 -05:00
Sharan Roongta 11f1f4f555 Merge branch 'modernize-testing' into development 2020-11-03 12:49:19 +01:00
Philip Eisenlohr 2867050397 corrected shortened test logic 2020-11-02 18:31:37 -05:00
Philip Eisenlohr 4fa44d388d shortened test for monotonous increase of material index after sorting 2020-11-02 18:21:51 -05:00
Philip Eisenlohr 4d4278e6dd shortened tainted_neighborhood logic 2020-11-02 18:20:52 -05:00
Martin Diehl cf958d32b4 Merge branch 'development' into vector-mechanics 2020-11-02 15:23:11 +01:00
Martin Diehl be47c744d8 Merge branch 'development' into geom-sort 2020-11-02 12:26:31 +01:00
Martin Diehl 212ed62b19 pytest-based tests
removed unused functionality from deprecated python library modules
2020-11-02 12:07:16 +01:00
Martin Diehl 086b215d94 Merge branch 'test-new-dir' into development 2020-11-01 19:29:52 +01:00
Martin Diehl cf18954db9 hint for future improvement 2020-11-01 19:20:52 +01:00
Martin Diehl 7059e6af6e might not be in the last line 2020-11-01 18:34:52 +01:00
Martin Diehl 946da2379b Merge remote-tracking branch 'origin/development' into modernize-testing 2020-11-01 10:06:52 +01:00
Martin Diehl 0a3598c338 Merge branch 'simplify-from_table' into development 2020-10-31 22:34:17 +01:00
Martin Diehl 0ebb9b611d functionality to sort material id
convenient for layered materials
2020-10-31 20:46:21 +01:00
Martin Diehl 67f69fc8a5 data is consecutive 2020-10-31 17:23:58 +01:00
Martin Diehl 8224122bb9 more user friendly error handling 2020-10-31 13:16:25 +01:00
Martin Diehl cf740a279e combine constant with varying data 2020-10-31 09:56:43 +01:00
Martin Diehl aecf2f539e allow one homogenization
quite useless ...
2020-10-30 22:26:02 +01:00
Martin Diehl c29e3650f3 don't squeeze into scalar 2020-10-30 22:24:27 +01:00
Franz Roters 392803e47d Merge remote-tracking branch 'origin/Marc_version_names' into development 2020-10-30 17:49:18 +01:00
Philip Eisenlohr 46e5023f8b Merge branch 'geom-improvements' into 'development'
Geom improvements

See merge request damask/DAMASK!264
2020-10-29 23:53:33 +01:00
Martin Diehl b2289e80b2 simplified 2020-10-29 20:09:13 +01:00
Martin Diehl 0e499eedf3 correct rounding/clearer logic 2020-10-29 18:35:22 +01:00
Martin Diehl 4b700d367e improved test 2020-10-29 17:59:44 +01:00
Vitesh Shah 904c338b13 Reflect version underscore of installation files 2020-10-29 15:21:40 +01:00
Martin Diehl 999cf53c07 tests+fixes 2020-10-29 07:42:41 +01:00
Martin Diehl 3be0c462a8 explicit is better then implicit:
user should sort Table according to coordinates to create geometry. This
allows to have consistent behavior for from_table in Geom and
ConfigMaterial. We always ensure to keep the order
2020-10-29 07:25:16 +01:00
Martin Diehl 1b2cd6caf6 documentation was misleading 2020-10-28 21:53:46 +01:00
Martin Diehl 4ff99a7af4 more logical layout 2020-10-28 21:51:20 +01:00
Martin Diehl 855bf124d3 faster
https://stackoverflow.com/questions/16992713
2020-10-28 16:53:16 +01:00
Sharan Roongta 21f095c9d8 Merge branch 'flexible-yaml-dump' into development 2020-10-28 16:19:17 +01:00
Martin Diehl 98e0ef3881 no loops
taken from https://stackoverflow.com/questions/3403973
2020-10-28 13:38:20 +01:00
Martin Diehl d72343c865 keep order of unique values found in table 2020-10-28 11:56:28 +01:00
Martin Diehl b38a498197 fast 2020-10-28 09:43:20 +01:00
Martin Diehl 5f03e8cf8f 0-based material indices 2020-10-28 09:31:55 +01:00
Martin Diehl a5a127b787 new tests+ updated results 2020-10-27 16:46:08 +01:00
Martin Diehl 0804e6ee74 pythonic names 2020-10-27 13:50:47 +01:00
Martin Diehl fa67a2ddf8 cell_coordinates is now a property 2020-10-27 13:35:14 +01:00
Martin Diehl 201a62d7c9 easier visualization if verts have a point-cell 2020-10-27 13:19:53 +01:00
Martin Diehl 4dd387d7f5 compatibility with old pyyaml + test for numpy 2020-10-27 06:39:58 +01:00
Martin Diehl 4159ae5f3d keep order of keys 2020-10-26 21:44:38 +01:00
Martin Diehl 5834d95012 support for more types
- allow to directly use Config and its sublasses (cast to dict)
- convert numpy arrays
2020-10-26 21:38:24 +01:00
f.basile 802e09be4f python/damask/_geom.py exceeds line length limit (maximum line length 143 > 132) 2020-10-26 15:11:06 +01:00
f.basile 2715e7b1a7 a bit more vectorized 2020-10-26 15:09:32 +01:00
f.basile 1cbfa866d2 get rid of scalar variables 2020-10-23 16:23:36 +02:00
Vitesh Shah bd67296e8d MARC_VERSION as MSCVERSION 2020-10-22 11:50:13 +02:00
f.basile 7fa31a8a1b solving imported but unused pyflake 2020-10-19 12:55:35 +02:00
f.basile 4c22efc6ce added show GB 2020-10-19 12:52:10 +02:00
Martin Diehl bac7ace413 Merge remote-tracking branch 'origin/general-N_constituents' into vtr-only 2020-10-13 17:39:19 +02:00
Martin Diehl 86d91baf90 0-offset for geom 2020-10-10 10:36:15 +02:00
Martin Diehl ffabeacbcb removing functionality related to deprecated 'geom' format 2020-10-10 09:41:11 +02:00
Martin Diehl 00e2128e03 don't test ASCII functionality
vtr writing in Geom class is alwas serial, no need to wait
2020-10-10 09:02:25 +02:00
Martin Diehl 06d11a72da better fitting name
load implies a more direct takeover.
2020-10-09 19:19:05 +02:00
Martin Diehl 57180952ec typo 2020-10-09 19:05:05 +02:00
Martin Diehl 347c88cbb6 documented 2020-10-09 14:24:29 +02:00
Martin Diehl 75401dd280 generate configuration from table 2020-10-09 07:45:20 +02:00
Martin Diehl 0c68d293b6 N_constituents is now a general homog property 2020-10-09 07:44:05 +02:00
Martin Diehl 6ecaaa31c9 fairly general function to generate material configuration 2020-10-08 22:07:26 +02:00
Martin Diehl 952ad4f8fe functionality for geom generation in python lib 2020-10-08 18:39:05 +02:00
Martin Diehl 3050471a2d avoid circular inclusion 2020-10-08 18:05:03 +02:00
Philip Eisenlohr 846cbdd2e4 Merge branch 'general-config' into 'development'
General config

See merge request damask/DAMASK!245
2020-10-08 00:48:16 +02:00
Martin Diehl 8d4adebea2 pyaml is now needed 2020-10-06 17:46:34 +02:00
Martin Diehl 3d49678e93 new names part 2 2020-10-02 17:51:33 +02:00
Martin Diehl 1b18cae46b adjusted to new names 2020-10-02 17:49:52 +02:00
Martin Diehl a04966582a Merge remote-tracking branch 'origin/development' into general-config 2020-10-02 14:54:16 +02:00
Martin Diehl 58229b8851 relaxed test conditions
even threshold between -.5 and +.5 can result in a single material.
2020-10-02 13:26:11 +02:00
Martin Diehl b29f22f513 documenting the actually available TMPS 2020-10-01 09:25:32 +02:00
Philip Eisenlohr a59e64a8e4 renamed TPMS and added more from additional references 2020-09-30 17:28:25 -04:00
Martin Diehl 33685bc493 allow user do control output style
(numerics.yaml looks strange otherwise)
2020-09-30 12:32:37 +02:00
Martin Diehl 5ad46ae021 completely tested 2020-09-30 09:05:23 +02:00
Martin Diehl fdfcb16d15 not needed 2020-09-30 08:16:12 +02:00
Martin Diehl bbed4f9c6e nice formatting
will be checked by pre-receive hook
2020-09-30 08:15:02 +02:00
Martin Diehl b383a4530e better name, subclassing for easy extension to load 2020-09-30 07:53:25 +02:00
Martin Diehl 54e4943353 get rid of shell scripts 2020-09-30 07:11:33 +02:00
Martin Diehl 76f07e4c1e tmp_path is preferred over tmpdir 2020-09-29 19:25:50 +02:00
Philip Eisenlohr 350f5eb66a improved from_ODF documentation 2020-09-29 12:55:00 -04:00
Philip Eisenlohr 31f86c28f4 [skip ci] added parameter description; shortened hybrid_IA pre-loop logic 2020-09-29 11:15:10 -04:00
Martin Diehl 8d204ea445 [skip ci] small simplification 2020-09-28 16:17:43 +02:00
Martin Diehl d2cfcdaca0 reference Data for ODF sampling (hybridIA) + skeleton of a test 2020-09-28 16:14:27 +02:00
Martin Diehl 95b85626d8 general hybridIA functionality 2020-09-28 07:40:43 +02:00
Martin Diehl 8ec1014134 Merge remote-tracking branch 'origin/development' into cleaning 2020-09-27 18:11:43 +02:00
Vitesh Shah e8e1960391 Consistency for docstrings 2020-09-26 18:02:25 +02:00
Vitesh Shah d0028b2eea Merge branch 'development' into fix-docstrings-for-sphinx 2020-09-26 17:56:42 +02:00
Martin Diehl 9e3506b8ef thorougly testing seeding functionality 2020-09-25 07:41:58 +02:00
Philip Eisenlohr e58cc4bfa0 removed substitute call for direct mapping; added seed from averaging of material ID cloud 2020-09-24 22:06:43 -04:00
Martin Diehl e8454c40c7 more tests 2020-09-24 22:59:31 +02:00
Martin Diehl 4960cf43d4 documented and tested 2020-09-24 21:43:04 +02:00
Martin Diehl e5b414419a Poisson disc for periodic situation 2020-09-24 21:26:16 +02:00
Martin Diehl ec23ab8b61 basic test for seeding 2020-09-24 21:06:26 +02:00
Martin Diehl b5ea04424b Merge remote-tracking branch 'origin/development' into seeds-module 2020-09-24 20:58:53 +02:00
Philip Eisenlohr 8c8db5b99f switched "Geom.materials" to "Geom.material" 2020-09-23 17:27:15 -04:00
Martin Diehl b995f34834 Merge branch 'development' into geom-fully-out-of-place 2020-09-23 22:50:20 +02:00
Martin Diehl 8c83566b71 suppress warning
we already handle the invalid FPE
2020-09-23 21:10:39 +02:00
Martin Diehl 9bce1ddc29 simplified 2020-09-23 20:48:34 +02:00
Franz Roters 3612b17295 corrected Sphinx warnings 2020-09-23 16:21:20 +02:00
Martin Diehl c85d27baec functionality for seed creation 2020-09-23 09:45:36 +02:00
Martin Diehl ae579d8baa allow to specify seed IDs explicitly 2020-09-23 09:28:00 +02:00
Sharan Roongta 5a64dd30e1 Merge branch 'development' into modernize-testing 2020-09-23 00:05:59 +02:00
Philip Eisenlohr 683161d479 Merge branch 'development' into geom-fully-out-of-place 2020-09-22 15:22:58 -04:00
Philip Eisenlohr 05835bacd3 removed set_X(), duplicate(), and .homogenization; renamed ".microstructure" to ".materials" 2020-09-22 14:49:28 -04:00
Martin Diehl 716a406361 Merge remote-tracking branch 'origin/master' into modernize-testing 2020-09-22 16:51:36 +02:00
Franz Roters 7801f527f2 Merge remote-tracking branch 'origin/load-save-X-no-suffix' into development 2020-09-22 14:57:39 +02:00
Martin Diehl 5ef761fb98 inform the user about missing items in material.yaml 2020-09-21 19:10:20 +02:00
Philip Eisenlohr 188905766f removed Geom.get_X() methods in favor of direct property access 2020-09-21 11:13:53 -04:00
Philip Eisenlohr ca2f3f9493 set_X and add_comments methods now default to out-of-place 2020-09-21 10:29:07 -04:00
Martin Diehl 7bdd44a3d9 consistent names:
default file operations: save/load, non-default save_xx/load_xx
2020-09-20 22:04:28 +02:00
Martin Diehl d33507866d statistically more valid test 2020-09-20 21:50:52 +02:00
Martin Diehl 6ab88aad2b default format for Table is ASCII
hence, renamed load_ASCII/save_ASCII to load/save
2020-09-20 20:45:06 +02:00
Martin Diehl 5895e74029 p is never above 1
1e-4 is quite low, usually we are far above. 1e-3 from https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.normaltest.html
is not too far away.
2020-09-20 19:13:54 +02:00
Philip Eisenlohr 5b0b0de6b4 assertion reports offense; fixed seeds for spherical and fiber 2020-09-20 12:22:41 -04:00