Philip Eisenlohr
a84838d3ba
removed erroneous print statements (leftover from debugging)
2012-05-07 19:28:21 +00:00
Philip Eisenlohr
c9e17319ec
now with correct ID and LF line endings... ;-)
2012-05-07 19:11:46 +00:00
Philip Eisenlohr
361b7ad398
new script to generate a twoD probability density map from ASCIItable data
2012-05-07 19:09:11 +00:00
Philip Eisenlohr
c2954a2b33
now all heading labels squeeze out whitespace from their name.
2012-05-05 18:43:48 +00:00
Philip Eisenlohr
28e9b483ad
corrected wrong byte offset when reading thru 2^31-1-8 four-byte limit
2012-05-01 22:42:45 +00:00
Martin Diehl
99f2b8603a
new script for reconstruction of elements from F/IP(spectral_buildElements.py), corrected spectral_randomSeeding.py, made post/postResults.py aware of additional header/footer for file positions larger than 2**31-1
2012-04-24 15:09:20 +00:00
Martin Diehl
335df4346f
deleted accidentally checked in file
2012-04-19 11:52:01 +00:00
Martin Diehl
31753be16f
updated setup/setup_processing.py with new files
...
added data_readLine(LINE) and data_skipLines(LINES) for ascii table
2012-04-18 11:42:57 +00:00
Martin Diehl
17f644b261
new scripts to add deformed configuration to ASCII table and for generation of layered 2D geometries (EBSD)
...
addCompatibilityMismatch.py is now using functions from ASCII table library
2012-04-18 09:58:59 +00:00
Philip Eisenlohr
33ab391c14
added total increment column
2012-03-14 15:05:49 +00:00
Christoph Kords
ac5b6233e6
initialize lastIncrement to 1
2012-03-14 14:59:20 +00:00
Philip Eisenlohr
9b17015b5a
added option for nodal quantity output (uses "linear" translation).
...
improved stability when requesting non-existing increments.
2012-03-05 15:22:10 +00:00
Christoph Kords
dc7234fd02
new option "--suffix" adds a suffix to the filename
2012-02-28 14:24:45 +00:00
Christoph Kords
10e93244c1
writing info to stdout instead of stderr
2012-02-28 13:21:59 +00:00
Philip Eisenlohr
fc40291f38
script to add a suffix to specified ASCIItable labels
2012-02-24 08:53:19 +00:00
Philip Eisenlohr
53d7076d05
remove the info part from ASCIItables
2012-02-23 13:53:50 +00:00
Philip Eisenlohr
a2b46c8a36
columns can be called by index
...
now pipe-aware...
2012-02-23 13:53:12 +00:00
Martin Diehl
d68a3d1869
added LF=UNIX to a bunch of files
2012-02-22 13:30:00 +00:00
Philip Eisenlohr
ff4c281ed2
fixed whitelist/blacklist behavior (blacking out overrides whitelisting)
...
now broken pipes stop script's outputting.
2012-02-16 18:47:07 +00:00
Philip Eisenlohr
a994b4bcc9
fixed problem when condition was empty
2012-02-16 18:00:40 +00:00
Martin Diehl
f2729255f8
changed name in install script, small corrections on regex
2012-02-16 15:15:43 +00:00
Philip Eisenlohr
1bad5bf3c7
removed --count option. introduced 'internal' column #_row_#. adopted polished column head identification developed in filterTable. wiki updated.
2012-02-16 11:56:16 +00:00
Martin Diehl
9f45cb3745
new option: -c --count: count rows in ascii table and add column "row" with row number
2012-02-16 11:16:36 +00:00
Philip Eisenlohr
edd5adafd0
now with ID and correct line endings...
2012-02-16 08:58:07 +00:00
Philip Eisenlohr
37bd65ea34
script to filter an ASCIItable by condition. each row is evaluated against the condition, columns can be black- or white-listed (white wins)...
2012-02-16 08:36:35 +00:00
Martin Diehl
11d3c7a317
new spectra_parseLog searches through spectral log file and parses all possible output to an ascii table
2012-02-15 20:08:35 +00:00
Martin Diehl
b153a762cb
now using damask.core.math
2012-02-15 19:34:43 +00:00
Christoph Kords
bd32f1bf1a
adapting to current format of spectral out file
...
now using regular expressions to match "magic" lines
2012-02-15 12:07:00 +00:00
Philip Eisenlohr
8671b8ed38
script to delete existing columns from ASCIItable
2012-02-14 12:04:37 +00:00
Martin Diehl
156ec4582a
polishing, adding _pInt etc. where applicable
...
post_results now handels zero increment different (like FEM, it is always there even if it is not counted)
2012-02-13 14:18:07 +00:00
Philip Eisenlohr
3228cf563c
fixed bug when column was referenced multiple time in a formula.
...
changed column tagging character to '#' ('$' gave some trouble on the shell...)
2012-02-09 15:46:25 +00:00
Philip Eisenlohr
0f7c74e02d
set ID flag and line endings
2012-02-09 13:06:22 +00:00
Philip Eisenlohr
5a6cd1fc8f
slightly prettified handling of finite difference accuracy requesting
2012-02-08 12:01:38 +00:00
Philip Eisenlohr
56ce779f57
generalized slip system idea of Christoph to field data of "special" dimension (i.e. not 3 or 9).
...
dropped "norm"-suffix from input names of norms.
ASCIItable output is now called "normType" with type being Abs, Frobenius, or Max...
2012-02-08 12:00:31 +00:00
Philip Eisenlohr
282e4a0360
scripts now figure out dimension and resolution on their own...
2012-02-08 11:18:15 +00:00
Philip Eisenlohr
9c35e4e148
small polishing of help output.
2012-02-08 09:12:08 +00:00
Christoph Kords
51e8981ba3
not specifying the location of python executable directly, but rather getting it from $path, otherwise the scripts won't work on every machine
2012-02-07 13:09:10 +00:00
Christoph Kords
2f07faa0e2
norm capable of using different p-norms (abs norm, frobenius norm, and max norm). also able to handle "slipsystem" outputs (use option -s). number of slip systems can be set by option -i, if not 12 is default.
2012-02-07 13:02:56 +00:00
Philip Eisenlohr
bffc22fbe1
major restructuring. packing stencil can be shifted to allow for element or nodal value averaging.
2012-02-02 17:12:48 +00:00
Christoph Kords
9b679c3c0b
switched to damask include instead of outdated damask_tools
2012-01-31 13:08:25 +00:00
Martin Diehl
27a976c04f
changed to new structure (using damask module)
2012-01-26 12:46:38 +00:00
Martin Diehl
becb863110
added test for gfortran and gfortran vs intel, renamed intel test to new numbering scheme and changed to new div criterion
...
introduced "try" statement in lib/damask/test/test.py to avoid crash if a test variant fails
2012-01-25 15:14:31 +00:00
Philip Eisenlohr
7869379d38
output directory (--dir) can now cope with absolute path...
2012-01-20 19:53:56 +00:00
Philip Eisenlohr
076fef3323
now fully supports output of vector fields (needs POINT data for useful visualization!!)
2012-01-19 20:42:50 +00:00
Philip Eisenlohr
b134ec7a39
adopted ASCIItable class and checked correctness of results.
2012-01-19 20:41:56 +00:00
Philip Eisenlohr
7ed2c19d0f
switched importing from "msc_tools" to "damask"
...
patchFrom... now skips blank lines, has more commenting, treats (artificial) bi-crystal (somewhat) gracefully.
2012-01-16 09:32:36 +00:00
Philip Eisenlohr
55639f3362
added log time scale capability for spectral results
2012-01-12 08:06:25 +00:00
Martin Diehl
9abf5a110d
changed from old DAMASK (f2py) module to new integrated damask tools
2012-01-06 10:41:23 +00:00
Philip Eisenlohr
fbe908ccd2
now uses damask.core.math package
2011-12-22 10:42:24 +00:00
Krishna Komerla
f463c2da70
added addCurl.py, not sure if it works correctly. still in old (eq. to addDivergence.py) style
2011-12-21 17:25:31 +00:00
Martin Diehl
3706bcbc3e
fixed bug
2011-12-20 14:19:01 +00:00
Philip Eisenlohr
1194deff54
corrected leftover mistake (items --> table.data)
2011-12-15 10:53:20 +00:00
Philip Eisenlohr
fb7adf7b89
adopted use of general damask package
2011-12-15 08:53:18 +00:00
Christoph Kords
609175318e
added option for output of colormap palette also as float values 0.0-1.0
2011-12-08 10:02:48 +00:00
Martin Diehl
ea0fe7b406
corrected 3D visualize (math.f90 part was not working)
...
small polishing of voronoi_tessellation.f90
2011-12-06 17:46:33 +00:00
Martin Diehl
5ebeb96e85
made DAMASK to work with gfortran:
...
-removed to long lines
-restructured f2py modules and merged make_DAMASK2Python into setup processing
-setup_code.py now sets library path in makefile and asks for compile switches for spectral code
-substituted \ in format strings with $
restructured DAMASK_spectral:
-more logical output and structure of code
-better input for spectral debug parameters
2011-12-06 16:58:17 +00:00
Philip Eisenlohr
9d3f7b8d3d
adopted ASCII_TABLE class
2011-12-04 09:57:13 +00:00
Christoph Kords
42c3074821
mini calculator for column-column arithmetic
2011-12-02 15:15:36 +00:00
Martin Diehl
ace6851389
moved all routines from postprocessingMath to math.90, renamed the module to DAMASK, changed scripts and interfaces accordingly.
...
polished math.f90 (mainly added _pInt/_pReal and intent(in/out))
curl_fft is still a dummy function
2011-12-01 12:01:13 +00:00
Philip Eisenlohr
e98590d850
adopted ASCII_TABLE class
2011-11-24 17:10:50 +00:00
Philip Eisenlohr
18a09d7cff
corrected handling of STDIN|STDOUT
...
adopted ASCII_TABLE class
2011-11-24 14:48:02 +00:00
Martin Diehl
267b8ac30c
started to add curl calculation to postprocessingMath.f90
...
restructured colormap calculation. Algorithm is working now, but input/output still has to be done
2011-11-23 20:08:48 +00:00
Philip Eisenlohr
48f8d4ccb5
exchanged logic now using ASCII_TABLE class...
2011-11-23 14:54:53 +00:00
Philip Eisenlohr
f685bbba0e
exchanged location of "graincount" in user block.
...
now matches wiki entry:
1. homogenization block
2. grain block
(grain count
sub-block[s] of crystallite and constitutive)
2011-11-23 09:09:00 +00:00
Philip Eisenlohr
e8f5996a96
renamed MSC_TOOLS.library_paths to libraryPath, since only single string is returned
2011-11-23 08:25:52 +00:00
Philip Eisenlohr
21fcd0357e
now subsumed into general postResults functionality
2011-11-22 19:43:37 +00:00
Martin Diehl
75e20dffb7
corrected version conflict
2011-11-17 21:36:56 +00:00
Martin Diehl
09799b5b58
compile test is now at least compiling. still comparison to reference results has to be done
2011-11-11 15:06:33 +00:00
Claudio Zambaldi
06176873e4
after a somewhat lengthy discussion with Philip about usability and developability and general file-naming philosophy we think that we found a compromise on the "to-dot-py or not-to-dot-py" issue:
...
symlinks in DAMASK_ROOT/bin do not carry the extension, but the source files do.
Hope that results in the maximum number of happy developers and users.
2011-11-09 15:37:45 +00:00
Martin Diehl
98513a4e0d
2011-11-07 18:27:33 +00:00
Martin Diehl
de96e99bca
corrected determination of restartRead from commandline (now done by FEsolving instead of DAMASK_spectral_interface)
...
recompiled fftw libraries with --enable-shared to make them work with f2py
added draft for compilation test of spectral solver
2011-11-07 18:25:10 +00:00
Christoph Kords
ba63d3231f
fixed string include
2011-11-04 10:27:41 +00:00
Philip Eisenlohr
9e3d7d7d6c
made $DAMASK_ROOT definition optional
2011-11-03 13:51:54 +00:00
Philip Eisenlohr
b9647b2584
moved parts into new "lib" folder
2011-11-03 13:21:11 +00:00
Philip Eisenlohr
aba7937845
now uses msc_tools method to figure out Mentat path
2011-11-03 13:16:00 +00:00
Philip Eisenlohr
4e8f36a133
remove $ID$ from first line (I am wondering how this could work...)
2011-11-02 18:49:53 +00:00
Martin Diehl
7642509a47
first working draft of automated code testing, run_tests.py assumes DAMASK is located under ~/DAMASK/
2011-10-24 16:24:15 +00:00
Claudio Zambaldi
e7a60988a1
modified exit number extraction
2011-10-24 13:02:08 +00:00
Claudio Zambaldi
93b2160c2f
extract exit number from MSC out-file. Other MSC utility functions can also go into MSC_TOOLS class.
2011-10-24 12:59:46 +00:00
Philip Eisenlohr
414bacb096
deleted unused vars. changed linking library info/path
2011-10-20 12:47:57 +00:00
Philip Eisenlohr
ed08dfc2be
added option to select between cell-centered (as before) or vertex-centered data
2011-10-20 12:29:59 +00:00
Philip Eisenlohr
c78227cec1
added option to skip data points along x,y,z in case they are periodic images. relevant for vertex-centered data for which outer surface data is doubled, i.e. data(0,0,0) == data(Nx,Ny,Nz)
2011-10-20 12:28:39 +00:00
Philip Eisenlohr
3a0911ca89
added option to output RGB palette on terminal
...
number of colors is now variable (default 32)
warning issued if MSC path not valid
new "redblue" sym colormap
2011-10-20 11:59:15 +00:00
Philip Eisenlohr
c7c541f393
corrected typos and such
2011-09-13 15:57:58 +00:00
Philip Eisenlohr
b412239d9f
reflects new output format of DAMASK_spectral to find
...
*** Loadcase...
lines.
2011-09-05 13:39:44 +00:00
Philip Eisenlohr
f3c2547fba
name change to better reflect what happens: comparison between local deformation field and a (necessarily compatbile) geometry reconstructed from the whole deformation field.
2011-08-26 07:17:35 +00:00
Martin Diehl
eb0ce3992b
debugging of addDebugInformation (now working, but not tested in detail)
...
Added Id to postprocessingMath
2011-08-25 18:18:38 +00:00
Philip Eisenlohr
7aba05ed9f
reworked to match former script layouts and logics. (not yet tested, use at your own risk)
2011-08-25 17:55:36 +00:00
Martin Diehl
282d2d7b97
corrected wrong Id tag
2011-08-25 16:47:12 +00:00
Martin Diehl
bbee6c4658
forget to check in addDebugInformation
2011-08-25 16:44:36 +00:00
Martin Diehl
a5f176cf18
put divergence calculation using FDM to postprocessingMath, added divergence calculation using differentation in Fourier space to postprocessingMath
...
added functions to calculate the shape and volume mismatch of compatible and non-compatible geometry reconstruction to postprocessingMath. They can be accessed using addDebugInformation
2011-08-25 15:31:05 +00:00
Martin Diehl
cc3bc4a216
made handling of unknown dimension (i.e. resolution ==1) the same as for preprocessing (last commit)
2011-08-25 15:28:33 +00:00
Philip Eisenlohr
2dd8a353bb
now also works for single stepped loadcases, too
2011-08-19 10:03:42 +00:00
Martin Diehl
878ea443d6
added options to control written output (mesh(default), box, points) and to control reconstruction. --undeformed does not calculate average deformation of ve, --scaling controls the scaling of the fluctuation. Default is 1.0, with 0.0 no fluctuations are shown
2011-08-19 07:33:22 +00:00
Philip Eisenlohr
def056f30f
added $Id$ escaping
2011-08-18 08:00:19 +00:00
Philip Eisenlohr
e851c934ee
interrogate output from DAMASK_spectral for "error divergence:" evolution.
...
results in an ASCII datafile containing the increment counter with corresponding divergence value. the evolution within an increment i is stretched between i and i+1 (and likely jumps then for the next increment i+1 at the value i+1)
2011-08-14 10:44:15 +00:00
Philip Eisenlohr
a58158fc7c
bug fix related to hash key error when requesting --increments range
2011-07-25 12:53:54 +00:00
Onur Guevenc
8cb8637d41
fixed running with default --range & using --separation options.
2011-07-22 11:59:03 +00:00
Onur Guevenc
105a09f3df
only consider increments actually present in (spectral) result
...
added switch to change from range of positions to range of increments
polished help output
2011-07-21 15:45:41 +00:00
Christoph Kords
cb96559d99
mappings should rather be called "sumabs" and "avgabs" than "abssum" and "absavg"
2011-07-15 11:27:47 +00:00
Christoph Kords
63451f6edf
added "absavg" (=average of the absolute values) to the predefined mappings
2011-07-15 08:07:33 +00:00
Philip Eisenlohr
b252b467e8
moved useful ASCII post processing scripts from my Code repository into the DAMASK post-proc.
2011-06-21 16:25:48 +00:00
Onur Guevenc
daa45306f2
fixed a nasty bug in reading the header of spectral files
...
file type is guessed from extension
script tries to gracefully continue when data is missing but not crucial
ASCII file splitting now has correct increment (not position) in its name: poop_inc123.txt refers to true increment 123 not to position 123 in the result file anymore...
2011-06-21 12:38:58 +00:00
Philip Eisenlohr
b6b02f6cf9
now reports over all loadcases present in the output file, not just a selected one...
2011-06-15 18:14:05 +00:00
Philip Eisenlohr
dd11ef3072
added capability to deal with (Marc, spectral) output files that have less than every increment stored.
2011-06-15 17:49:59 +00:00
Onur Guevenc
d52fb1666e
"step" header is modified to "inc" to be consistent with postResults outputs.
2011-06-09 12:39:08 +00:00
Philip Eisenlohr
a72a97f0ba
added nodalScalar capability.
...
--ns 'elements' reports the nodal connectivity (list of elements touching a node)
--prefix allows to prefix the output filename
2011-06-08 16:54:46 +00:00
Christoph Kords
5740e13485
added new predefined mapping "abssum", which returns the sum of all absolute values
2011-06-08 14:07:15 +00:00
Christoph Kords
2cbfb69235
user defined mapping didn't work because of misspelled variable in "mapIncremental"
2011-06-08 13:56:21 +00:00
Philip Eisenlohr
4a2078e965
produces two-column data of step | iteration at which convergence was reached (or aborted). Source file is the redirected STDOUT of DAMASK_spectral
2011-05-31 12:31:35 +00:00
Philip Eisenlohr
5e6de13962
removed useless grain selection option (--grain)
...
escaped MPIE\n.... in $ID$
fixed problem when writing output files into subdirectories
2011-05-26 09:44:10 +00:00
Philip Eisenlohr
96a4d83b9b
fixed bug in user mapping function.
...
corrected examples and added incremental mapping explanation to usage hint.
2011-05-26 09:41:53 +00:00
Nan Jia
3ae8b0f732
dropped grain index from output header (did not work anyhow)
...
introduced string escape for the likes of MPIE\n.jia to prevent newline literal
2011-05-24 17:23:22 +00:00
Nan Jia
73b1dbc5f7
corrected printing bug
2011-05-23 15:11:01 +00:00
Philip Eisenlohr
6daa8b710b
shortened output header to contain only one description line that includes the command line switches passed to postResults
2011-05-23 07:13:28 +00:00
Philip Eisenlohr
2a8dc1bff1
Fixed a bug introduced in the last revision. Datatype keywords (SCALARS, VECTORS, ...) were not written in plural form into VTK file, thus had not been recognized by ParaView.
2011-05-22 14:01:18 +00:00
Philip Eisenlohr
8879e03a60
better reporting and fixed a bug when requesting non-existing data
2011-05-21 21:43:40 +00:00
Philip Eisenlohr
25e3c4baf8
nicer STDOUTput and can now properly deal with resolutions of 1
2011-05-13 16:53:27 +00:00
Philip Eisenlohr
4658190951
now reports command line switches used in generating output files
2011-05-12 09:53:44 +00:00
Philip Eisenlohr
25bf6bf7dd
reports command line switches used in generating output files
2011-05-12 08:25:34 +00:00
Christoph Kords
1928fa816c
output now contains both node and ip number
...
relation between node and ip numbering is given in new function ipIDs
2011-05-06 10:00:27 +00:00
Christoph Kords
56b2b3e572
* quick fix in order to make it work for elements of type 57 (quadratic with reduced integration)
...
* length for results of type "elemental tensor" is exactly 7
2011-05-05 09:16:29 +00:00
Philip Eisenlohr
2fa4a344b9
added sloppy option to circumvent increment range check. that is useful to reach the last inc in former FFT sim results, which have a wrong inc count in their header
2011-05-02 16:10:18 +00:00
Philip Eisenlohr
97185fb30b
removed debug printing...
2011-04-14 14:03:06 +00:00
Philip Eisenlohr
f598e3b6ed
corrected mixup of Fortran (1,2,3,...) indexing to Python (0,1,2,...) style.
...
fixed erroneous array indexing in neighborhood calculation.
2011-04-14 10:11:23 +00:00
Philip Eisenlohr
2a04bfdbba
fixed error concerning mixed-up index starts (0 vs 1)
...
"illegal" mapping functions are not checked anymore, i.e., if you want to average Euler angles you get it..!
sorting is now "natural", i.e., separating or sorting for "x,y,z" returns x varying fast and z slow. "--sort" overrides "--separate" in terms of output sorting (as expected...)
2011-04-13 16:31:44 +00:00
Philip Eisenlohr
482be626e0
major recoding.
...
now with tiny memory footprint and better guessing of remaining time.
2011-04-12 17:46:35 +00:00
Nan Jia
e4cbdc5743
now also works for 2D quadratic triangular element type 125
2011-04-06 13:11:25 +00:00
Philip Eisenlohr
a989aa979e
corrected increment offsetting for spectral file type. should now be consistent with new (0+N) mpie_spectral output scheme
2011-04-06 10:00:19 +00:00
Franz Roters
8467c91dab
moved setup scripts back to subdirs where they are needed
2011-03-22 15:42:53 +00:00
Philip Eisenlohr
6ac2b4cf88
deleted useless storage of data resulting in partial speed-up.
...
large datasets (>1 mio elements) cannot be processed at the moment---investigation required, why each element eats about 20kB of memory?
2011-03-11 16:32:01 +00:00
Philip Eisenlohr
1f0569230b
new installation/setup dir to hold all top-level make_*-scripts
2011-03-11 09:20:37 +00:00
Philip Eisenlohr
621c1198a4
Marc/Mentat related things are only executed for filetype marc. this has been too lax before, causing trouble.
...
filetype is now lowercased right from the start, keeping effort low downstream...
2011-03-10 09:45:57 +00:00
Christoph Kords
6b63d488cb
need py_post, not py_mentat
2011-02-28 10:00:08 +00:00
Philip Eisenlohr
9312aed545
set executable bit
2011-02-27 21:51:56 +00:00
Martin Diehl
8cae4d609a
some polishing for single precision version.
...
Now only prec and mpie_spectral are needed in different versions
2011-02-25 12:41:46 +00:00
Martin Diehl
cd5407b08b
removed all math functions only for double precision by the more flexible counterpart, e.g. "dsqrt --> sqrt", "dsin --> sin". Should not cause any harm, as long as "implicit none" is used.
...
Now it is possible to compile a single precision spectral solver/crystal plasticity by replacing mesh.f90 and prec.f90 with mesh_single.f90 and prec_single.f90.
For the spectral method, just call "make precision=single" instead of "make". Use "make clean" evertime you switch precision
2011-02-25 09:25:53 +00:00
Martin Diehl
f525c02ded
added single precision libraries for FFTW
...
First try of implement single precision crystal plasticity, not working yet.
polishing text about geometry construction.
polishing postResults, still having problems concerning machines without MSC installation
2011-02-24 18:39:57 +00:00
Martin Diehl
3c944e79fa
did some things Philip told me to do (postResults for spectral files is now working without MSC installation)
2011-02-22 16:18:47 +00:00
Philip Eisenlohr
003b0def46
fixed a stupido error
2011-02-22 16:06:24 +00:00
Martin Diehl
333445be8b
changed meshing routine from python to fortran (f2py)
2011-02-22 16:00:22 +00:00
Philip Eisenlohr
2dc3b35725
no need anymore for msc python interface when dealing with spectralOut files
2011-02-22 15:57:27 +00:00
Martin Diehl
8a5e28d5a6
now using fft reconstruction in 3Dvisualize, linear python code for reconstruction is removed
2011-02-21 21:03:21 +00:00
Martin Diehl
c399a06c97
tried to implement an inverse reconstruction, meaning to calculate an average deformation gradient from the 8 cornes of a node in reference and current configuration. Not working yet.
...
polishing, mainly in fft reconstruction.
added fftw library file and fortran file for type specification
added folder references with literature for visualization/geometry reconstruction
2011-02-21 16:30:18 +00:00
Philip Eisenlohr
34336bc659
fixed bug when no argument was supplied
2011-02-18 09:02:29 +00:00
Martin Diehl
438bf95105
added ft-based reconstruction of deformed configuration to postprocessingMath.f90 and postprocessingMath.pyf
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also added function to calculate average of tensor
some polishing in mpie_spectral.f90, added sanity check to see im resolution is power of 2
2011-02-14 17:21:31 +00:00
Martin Diehl
3d7fad6ba9
mpie_spectral.f90: changed fourier transormation, now using the advanced interface to do the tranformation both ways with just one call. now also using the same variable for pk-stress in both domains and the change of deformation gradient in both domains.
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postprocessing: renamed name of python/f2py modul from "reconstruct" to "postprocessingMath", added some numerical operations to use for postprocessing.
2011-02-09 17:47:28 +00:00
Philip Eisenlohr
65ae7de42b
fixed bug for missing file name
2011-02-09 09:18:21 +00:00
Martin Diehl
7a7ca1aab7
mpie_spectral and mpie_interface: changed workingdir from pathToLoadFile to pathToGeomFile
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mpie_spectral and numerics: added switch to prevent pre calculation of gamma_hat. slower, but saves memory
3Dvisualize: started to add support for gmsh (not fully working yet)
reconstruct: new version of f2py/Fortran subroutines for output of results from spectral method
2011-02-07 14:35:42 +00:00
Philip Eisenlohr
6511b4b5a2
added possibility to select predefined colorscheme from config file
2011-02-04 09:36:26 +00:00
Philip Eisenlohr
05350d573e
fixed a bug in new --sort
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--separation option now keeps data point location as intact as meaningful after applying averaging
2011-02-01 18:32:20 +00:00
Martin Diehl
669893b397
binary \n will not longer cause problems
2011-02-01 18:25:40 +00:00
Philip Eisenlohr
14d3d0ba99
less output but can now handle 'n/a' in data files without crashing
2011-02-01 16:43:00 +00:00
Philip Eisenlohr
ebf201e89c
sorry---wrong file version uploaded before.
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now correct: added "--sort" option extending the existing sorting according due to "--separation". This is, for instance, useful for separating /elementhomogeneous/ results by element and later listing the results along x,y,z...
slight improvement in file-error reporting
2011-02-01 13:24:19 +00:00
Philip Eisenlohr
958c51fc26
added "--sort" option extending the existing sorting according due to "--separation". This is, for instance, useful for separating /elementhomogeneous/ results by element and later listing the results along x,y,z...
2011-02-01 13:13:05 +00:00
Philip Eisenlohr
d6edb64929
produce VTK visualizations from postResults files
2011-02-01 10:48:44 +00:00
Martin Diehl
fec2c14a4e
removed hard-coded tolerances from mpie_spectral and put them to numerics/IO
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removed storage of full cauchy stres field from mpie_spectral.f90, only average is stored now
added cauchy stress and von mises equivalent calculation to spectral post.
2011-01-31 17:07:42 +00:00
Martin Diehl
17b8205e3f
reconstruction of geometry is now working. It is directly implemented in python (file spectral_post.py).
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reconstruction in fortran is not working (file reconstruct.f90) due to some problems with f2py
2011-01-26 12:56:52 +00:00
Christoph Kords
581955f68d
parsePostFile screwed up the position of outputs for a grain number larger than 1
2011-01-14 13:15:19 +00:00
Martin Diehl
a662a28a97
added support for spectral method result files
2011-01-12 16:55:56 +00:00
Martin Diehl
322cbd2597
changed tools for voronoi tessellation to match new specification (file extension and resolution). Also renamed the files, because the space characters cause trouble
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improved reconstruct.f90 and spectral_post.py, both files work now under linux
added make_reconstruct.py, small shell script for using f2py
2011-01-07 14:37:05 +00:00
Martin Diehl
20c00288b8
---had some problems with svn, hope everything is ok now---
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added new tools to generate colormaps for paraview and gmsh, written in python
removed old fortran colormap generator.
removed test.py (not longer needed) and the python module reconstruct.pyd (not running under linux)
2011-01-05 14:53:31 +00:00
Martin Diehl
3b0eeb9956
added files for geometry reconstruction from given deformation gradient.
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reconstruct.f90 is a fortran source file with comments to use with f2py
reconstruct.pyd is the compiled python module
test.py is a test file to check if the reconstruction works (unfortunately i does not at the moment, probably because there are type conflicts between fortran and python)
2010-12-22 10:59:54 +00:00
Martin Diehl
8d6ddcf28b
restructured (or structured at all) reading of header, first try of reading in deformation gradient
2010-12-09 15:53:52 +00:00
Martin Diehl
ac676623ca
reading of header is now working
2010-12-03 14:57:28 +00:00
Martin Diehl
2f47d4b09b
added conversion of 'resolution' in result file to integer array
2010-12-02 14:53:17 +00:00
Martin Diehl
ab82dbc99c
continued working on reading header of output file
2010-11-30 14:26:30 +00:00
Martin Diehl
9d32bc7ae6
added output of complete mesh to voronoi fast.f90
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first version of post processing for spectral method: spectral_post.py
2010-11-29 10:08:53 +00:00
Philip Eisenlohr
b2cc34349f
corrected mistake in nodeCoordinate assignment, bug-fix for option " --filter 'x,y,z' "
2010-11-12 08:56:04 +00:00
Philip Eisenlohr
be265aef37
slight improvement of remaining time estimate...
2010-11-02 16:55:56 +00:00
Philip Eisenlohr
796bffee2e
1) speed-up of elementTensor output
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2) added estimate of remaining time
2010-11-02 15:45:23 +00:00
Martin Diehl
e80e055c75
added three small programs useful for spectral method (fortran sourececode)
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voronoi fast.f90 and voronoi small memory.f90 are two variants to do a voronoi tessellation and write the result to a mesh file that can be interpreted by mpie_spectral.f90. Difference is the memory management resulting in one faster and one memory saving version. voronoi fast.f90 has also the ability to write out a file for Ricardo Lebensohns spectral code.
colormap.f90 is a simple code that can be used to generate colormaps for gmsh.
2010-10-31 16:06:10 +00:00
Philip Eisenlohr
487466dd88
scripts are now aware of symbolic links to themselves...
2010-10-26 16:26:55 +00:00
Philip Eisenlohr
d8a4cd1739
added optional argument --baseindex to specify what colorset should be influenced. identify colors, for instance, start at idx 214...
2010-09-13 07:31:27 +00:00
Alankar Alankar
006dce7d8a
printing euler angles (and defgrads and orientations) for individual ips now works
2010-09-08 11:55:57 +00:00
Philip Eisenlohr
4a31b175da
1) introduced default colors
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2) complaints are more verbose
2010-09-06 16:51:11 +00:00
Philip Eisenlohr
3b671faae7
added some flexibility (and bug-fixing) to the pre/post processing. the file 'MSCpath' contains the LOCAL path to the MSC installation (/msc in our case)
2010-08-17 18:21:22 +00:00
Philip Eisenlohr
94efd57663
started to put Marc/Mentat related scripts to corresponding post/pre processing folders. We should move development from my Code folder to here (sorry, lost history then...)
2010-08-16 20:47:27 +00:00