first working draft of automated code testing, run_tests.py assumes DAMASK is located under ~/DAMASK/

processing/msc_tools.py

@@ -0,0 +1,53 @@
+class MSC_TOOLS():
+    import string
+    
+    
+    def submit_job(self,
+                 run_marc_path='/msc/marc2010/tools/',
+                 subroutine_dir='../../../code/',
+                 subroutine_name='DAMASK_marc2010',
+                 compile='yes',
+                 compiled_dir='../../../code/',
+                 modelname='one_element_model',
+                 jobname='job1',
+                 #IOdir='',
+                 host=[]
+                 ):
+      import subprocess, shlex   
+      import shutil      
+      # Define all options [see Marc Installation and Operation Guide, pp 23]
+      run_marc=run_marc_path+'run_marc'
+      jid=' -jid '+modelname+'_'+jobname
+      compilation=' -u '+subroutine_dir+subroutine_name+'.f90'+' -save y'
+      options=' -nprocd 1  -autorst 0 -ci n  -cr n  -dcoup 0 -b no -v no'
+      cmd=run_marc+jid+options
+            
+      if compile=='yes' or compile=='y':
+        cmd=cmd+compilation
+        print 'Job submission with compilation.'
+      else:
+        shutil.copy2(subroutine_dir+subroutine_name+'.f90','./'+subroutine_name+'.f90')
+        shutil.copy2(compiled_dir+subroutine_name+'.marc','./'+subroutine_name+'.marc')
+        prog=' -prog '+subroutine_name
+        cmd=cmd+prog
+        print 'Job submission without compilation, using %s'%prog
+      out=open('out.log','w')
+      print(cmd)
+      print shlex.split(cmd)
+      self.p=subprocess.Popen(shlex.split(cmd),stdout=out,stderr=subprocess.STDOUT)
+      self.p.wait()
+      out.close()
+      
+    def exit_number_from_outFile(self,outFile=None):
+        import string
+        fid_out=open(outFile,'r')
+        for ln in fid_out:
+          if (string.find(ln,'tress iteration') is not -1):
+            print ln
+          elif (string.find(ln,'Exit number') is not -1):
+            substr=ln[string.find(ln,'Exit number'):len(ln)]
+            exitnumber=substr[12:16]
+            fid_out.close()
+            return int(exitnumber)
+        fid_out.close()            
+        return -1    

processing/post/msc_tools.py

@@ -1,14 +0,0 @@
-class MSC_TOOLS():
-
-  def exit_number_from_outFile(outFile=None)
-     fid_out=open(outFile,'r')
-     for ln in fid_out:
-       if (string.find(ln,'tress iteration') is not -1):
-         print ln
-         fid_out.close()
-       elif (string.find(ln,'Exit number') is not -1):
-         substr=ln[string.find(ln,'Exit number'):len(ln)]
-         exitnumber=substr[12:16]
-         fid_out.close()
-         return exitnumber
-     return -1