Commit Graph

699 Commits

Author SHA1 Message Date
Martin Diehl 17aa3c00dc more tests 2020-05-24 22:52:00 +02:00
Martin Diehl 296308e11e fix for rotation around 90 deg
more tests
2020-05-24 20:52:19 +02:00
Martin Diehl 34adefd4ca simplified 2020-05-24 18:30:45 +02:00
Martin Diehl 594fcb2b72 seems more appropriate 2020-05-24 15:10:53 +02:00
Martin Diehl 3231a49107 centralize functionality 2020-05-24 09:39:58 +02:00
Martin Diehl a3d9520c4b polishing 2020-05-23 15:54:28 +02:00
Martin Diehl 0549e33a00 vectorized/fast 2020-05-23 08:38:57 +02:00
Martin Diehl 7bd681a5ed very simple test 2020-05-22 19:04:02 +02:00
Martin Diehl b33de48528 testing broadcasting 2020-05-22 15:12:37 +02:00
Martin Diehl 23b1381eaf give credit 2020-05-21 11:30:25 +02:00
Martin Diehl 16f30a10d0 polishing 2020-05-20 23:50:08 +02:00
Martin Diehl 353fd3ceb6 more tests
now 95% test coverage of Rotation class
2020-05-20 19:16:31 +02:00
Martin Diehl 128a96e7f6 vectorized formula is enough 2020-05-20 18:13:51 +02:00
Martin Diehl bb419d49df polishing 2020-05-20 16:19:12 +02:00
Martin Diehl 9240dd59b2 mark as internal
all functionality (+ sanity checks) can be done with the class
functionality
2020-05-20 11:11:07 +02:00
Martin Diehl 9694767997 all seems to work now 2020-05-20 09:01:38 +02:00
Martin Diehl 1d8903bb0c transition code 2020-05-20 00:18:44 +02:00
Martin Diehl 1fa4a07bb8 for backward compatibility 2020-05-19 23:39:01 +02:00
Martin Diehl 3e00269179 again some more tests 2020-05-19 23:24:12 +02:00
Martin Diehl 1c53a37de4 more tests and adjustments to tolerances 2020-05-19 21:03:30 +02:00
Martin Diehl a6b0aaffba more tests
Hotfix needed for axis angle to matrix (not used in DAMASK, needs
further investigation)
2020-05-19 19:41:50 +02:00
Martin Diehl de79a5af43 directly test the internal conversions
some work to do ...
2020-05-19 09:55:23 +02:00
Martin Diehl 065c624f94 fix for backward compatibility 2020-05-19 09:10:14 +02:00
Martin Diehl ebf05a279e standard name 2020-05-19 08:59:03 +02:00
Martin Diehl 1a3a4a800e vectorized 2020-05-19 07:59:24 +02:00
Martin Diehl b6eebcd704 small fixes (testing P=+1) 2020-05-19 07:57:40 +02:00
Martin Diehl b200894a40 bugfix and further test 2020-05-19 07:57:40 +02:00
Martin Diehl 3dc90ddb94 use the formula from the paper, not from the reference implementation
a few multiplications should be faster than a transpose
2020-05-19 07:57:40 +02:00
Martin Diehl a25dd1c438 cleaning 2020-05-19 07:57:40 +02:00
Martin Diehl 743e91a78d cleaning 2020-05-17 08:01:34 +02:00
Martin Diehl 652ece6bb3 fix: wrong capitalization 2020-05-17 07:25:17 +02:00
Martin Diehl 2550447169 Merge branch 'development' into docstring-sphinx-adjustments 2020-05-17 00:10:58 +02:00
Martin Diehl a90865c877 non-vectorized versions not needed anymore
using them only for testing purposes
2020-05-17 00:10:18 +02:00
Martin Diehl 9ba419c2c3 Merge branch 'development' into vectorize_rotation 2020-05-16 20:58:06 +02:00
Martin Diehl 044f069437 bugfix: selected wrong data 2020-05-16 17:06:55 +02:00
Martin Diehl a279785149 Merge branch 'development' into misc-improvements 2020-05-16 17:01:48 +02:00
Martin Diehl 19638168e6 more sensible type checking and errors 2020-05-16 13:23:32 +02:00
Martin Diehl 9fa1539163 using new names 2020-05-16 11:17:12 +02:00
Martin Diehl 235f3c0df7 bugfix: copy and paste error 2020-05-16 11:16:52 +02:00
Martin Diehl e2ba294b75 bugfix: wrong variable 2020-05-16 09:40:32 +02:00
Martin Diehl 2dc46b783a simplified and tested 2020-05-16 00:58:40 +02:00
Martin Diehl dc508cdfce Merge remote-tracking branch 'origin/misc-improvements' into vectorize_rotation 2020-05-15 23:25:42 +02:00
Martin Diehl 3fd868dc45 Merge branch 'development' into vectorize_rotation 2020-05-15 23:25:36 +02:00
Martin Diehl b5b9bfaa99 need space at end of definition list 2020-05-13 11:36:16 +02:00
Martin Diehl 66b928c5af using doctest style
https://docs.python.org/3/library/doctest.html
https://numpy.org/doc/stable/docs/howto_document.html#sections (section
15)
2020-05-13 10:47:49 +02:00
Martin Diehl 6f3b526811 Merge branch 'development' into docstring-sphinx-adjustments 2020-05-13 10:38:45 +02:00
Martin Diehl b75e98ca3f forgotten debug statements
+ polishing of XDMF output
2020-05-07 19:12:05 +02:00
Martin Diehl c2b4f5516e DADF5_postResults tries to combine datasets, this does not work 2020-05-07 00:14:14 +02:00
Martin Diehl ef4a4dad4a shape property and numpy-like broadcasting
this makes it easy to apply a single rotation to a field
2020-05-05 14:44:08 +02:00
Martin Diehl eeb0df3a55 do not store absolute path 2020-05-05 10:42:54 +02:00
Martin Diehl 31c397255d equivalent (for a valid DADF5 file) but faster 2020-05-05 10:18:48 +02:00
Martin Diehl 14cdc031e0 write XDMF files
the limitation to scalar, 3-vector and 3x3-tensor comes currently from
XDMF/vtk/paraview

extension to multiple constituents and unstructured meshes might be
possible
2020-05-05 09:57:22 +02:00
Martin Diehl 6e99956b58 Merge branch 'development' into misc-improvements 2020-05-05 09:22:53 +02:00
Martin Diehl 5f3f87cd68 vectorizing cubochoric conversions 2020-05-04 17:43:38 +02:00
Martin Diehl 7d1e0850ab test + resulting bug fix 2020-05-03 17:04:03 +02:00
Martin Diehl 5d4b554b00 WIP: vectorizing 2020-05-03 07:48:13 +02:00
Martin Diehl c241eaec15 rely on correct input data 2020-05-03 07:23:46 +02:00
Martin Diehl f0bb50b97d vectorized rotation function 2020-05-02 15:22:17 +02:00
Martin Diehl c7a77ebc26 Merge branch 'development' into integrate-lambert 2020-05-02 09:21:42 +02:00
Martin Diehl 2df78e4e2f vecorized pyramid function for lambert projection 2020-05-02 09:17:31 +02:00
Martin Diehl ce9bdc50a4 common variable names 2020-04-29 14:46:58 +02:00
Martin Diehl 9e79935add Merge branch 'development' into less-shell-scripts 2020-04-28 20:43:16 +02:00
Martin Diehl 6864b9525d go back to original dir as soon as possible 2020-04-26 14:52:27 +02:00
Martin Diehl f02c77b6d0 more reasonable tolerance
still relatively high because ctf files store position with constant
number of digits and floating dot. Hence, the precision is very low
2020-04-24 20:01:57 +02:00
Martin Diehl 1610d5a5d2 Merge branch 'development' into misc-improvements 2020-04-24 20:01:40 +02:00
Martin Diehl 707324887f inform the user about planned functionality 2020-04-24 06:52:09 +02:00
Martin Diehl 042f64200c Merge branch 'development' into vectorize_rotation 2020-04-24 06:31:14 +02:00
Francisco Jose Gallardo Basile 898cf42aca Merge branch 'fix-grid-convention' into 'development'
Fix grid convention

See merge request damask/DAMASK!160
2020-04-23 19:02:23 +02:00
Martin Diehl cc3fa156cf support change of directory one object has been created 2020-04-23 16:29:20 +02:00
Martin Diehl a0b7c51bec less strict tolerances
grid position reported by EBSD has only a few decimal places, so
rounding errors occur
2020-04-22 23:32:34 +02:00
Martin Diehl 8ba547a1b5 no need for an extra file 2020-04-22 13:23:50 +02:00
Martin Diehl a39e6b7af9 hide internal variables 2020-04-22 13:12:30 +02:00
Martin Diehl a8c6fdd9ba for the sake of completeness 2020-04-22 07:40:02 +02:00
Martin Diehl 7efe14be35 Merge branch 'development' into vectorize_rotation 2020-04-21 19:29:30 +02:00
Martin Diehl 97a5880d76 ensure correct shape 2020-04-21 13:22:55 +02:00
Martin Diehl 75d7238376 vectorized as_XXX 2020-04-21 12:27:50 +02:00
Martin Diehl ae3eca5f98 fix for vectorized from_random 2020-04-21 12:08:16 +02:00
Martin Diehl ac75b9e4ca improved reporting + test 2020-04-21 11:17:15 +02:00
Martin Diehl 23fc58699f vectorize Rotation.fromXXX functions 2020-04-21 10:55:45 +02:00
Martin Diehl 4a05cdbbbb copy and paste error 2020-04-21 03:26:26 +02:00
Martin Diehl 528378eba2 polishing/bugfix
* HDF5 data has x fast, therefore reshape needs to be aware of 'F' order
* Datatype for True/False is 'bool' in python, not 'Boolean'
2020-04-20 22:51:51 +02:00
Martin Diehl 00cb17ccfa commenting 2020-04-20 22:47:55 +02:00
Martin Diehl 93db1b37ca some useful information 2020-04-20 22:32:13 +02:00
Martin Diehl 25d29bf438 no need for Fortran order forward/backward 2020-04-20 20:24:55 +02:00
Martin Diehl 1ccda22ae3 nothing to flatten here 2020-04-20 20:16:25 +02:00
Martin Diehl 4db91fff03 simplified 2020-04-20 20:14:27 +02:00
Martin Diehl f519e62cd5 testing data layout checks 2020-04-20 13:56:33 +02:00
Martin Diehl 9979eb58f4 consistent layout for grid data
has now always the shape ([x,y,z,...]) with x fastest. For conversion from or
to linear layout ([x*y*z,...]), e.g. storage in ASCII table, reshape needs
to have the 'F' option.
Credits to Vitesh and Fran for pointing this out.
2020-04-20 13:09:59 +02:00
Martin Diehl bce5ed62d5 polishing 2020-04-20 10:13:15 +02:00
Martin Diehl e3958263e3 Merge branch 'development' into misc-improvements 2020-04-15 21:03:51 +02:00
Karo Sedighiani 03aa6f9c80 Merge branch 'vectorize_rotation' into development 2020-04-14 19:34:11 +02:00
Philip Eisenlohr d3eba41519 [skip ci] fixed bug of double execution of np.degrees in asAxisAngle 2020-04-14 12:22:41 -04:00
Martin Diehl 69857176b2 search and replace error 2020-04-14 15:33:20 +02:00
Martin Diehl 93c75cada3 numpydoc style 2020-04-12 15:38:38 +02:00
Martin Diehl aaeec16c66 proper indentation for sphinx 2020-04-12 15:34:29 +02:00
Martin Diehl b6b98bd14f more meaningful 2020-04-12 15:20:09 +02:00
Martin Diehl c6c1878b13 asterisk is the emphasize sign for restructured text
not really needed here
2020-04-12 15:19:32 +02:00
Martin Diehl 3d10266fbc similar style as for other conversions 2020-04-12 01:29:11 +02:00
Martin Diehl 04fbc38a4b keep namespace clean and avoid overwriting in fromXXX functions 2020-04-12 01:19:11 +02:00
Martin Diehl f41a47ce8b polishing and slightly stricter tolerances 2020-04-11 23:27:25 +02:00