Martin Diehl
72efc7b30c
renamed resolution -> grid, dimension -> size
2015-03-11 08:55:48 +00:00
Martin Diehl
0dde6539ed
renamed from 1_ip to 1_ipinitialcoord
2015-03-11 07:22:11 +00:00
Martin Diehl
eb1561b528
changed postprocessing to use 1_ip instead of ip.x etc, plus corrected test files headers
2015-03-10 21:15:05 +00:00
Martin Diehl
271c9eed8b
use 1_ip instead of ip.x
...
Old format still as fallback option to support legacy files
2015-03-09 12:52:43 +00:00
Martin Diehl
4d587b1bf9
introduced 'alias' for ip.x by first searching for 1_ip
2015-03-09 11:32:16 +00:00
Philip Eisenlohr
639b030c65
shortened code for opening input file list
2015-03-06 17:04:44 +00:00
Tias Maiti
654aacf207
removed invalid options (options.packing, options.shift)
2015-03-05 21:41:53 +00:00
Philip Eisenlohr
53b40662ec
now with executable, correct line endings, and ID tags.
2015-02-11 17:26:56 +00:00
Philip Eisenlohr
d5f9f543ca
Script to generate PNG image from given column (or 2D data in overall ASCIItable) with custom colormap and pixel sizes.
...
Supersedes “imageFromData” from “Code” repository.
2015-02-11 17:25:49 +00:00
Philip Eisenlohr
9eae665365
fixed ‘too many files open’ issue when processing a large list of input tables.
2015-02-11 17:22:47 +00:00
Tias Maiti
1b1ed3bbcf
removed unnecessary lines
2015-02-11 06:18:08 +00:00
Martin Diehl
63434c2ddb
corrected error checking for correct type
2015-02-09 08:57:14 +00:00
Martin Diehl
7edd209ce4
corrected wrong name in add..., more verbose error checking for geom_from...
2015-02-07 22:22:28 +00:00
Martin Diehl
6140285ddd
small changes (use ip.x instead of 1_ip). Probably we should modify postResults to use the 1_, 2_, 3_, standard notation for ip as well
2015-02-07 18:13:51 +00:00
Martin Diehl
e4a94aa72b
put changes on algorithm from geom_fromEuclideanDistance into addEuclideanDistance
2015-02-07 17:11:46 +00:00
Tias Maiti
2c9c04eb76
added script to replace all rows of an ASCII table by a single row containing their average
2015-01-23 00:57:10 +00:00
Martin Diehl
5be9a75cff
fixed indentation
2015-01-22 09:04:01 +00:00
Martin Diehl
c08f704dee
added Id + a little help
2015-01-07 19:29:27 +00:00
Tias Maiti
ca58216134
added missing math module import
2015-01-05 12:25:03 +00:00
Martin Diehl
3e3c13bf0b
added missing math module import
2015-01-04 21:02:17 +00:00
Martin Diehl
5e8fff13d9
worked on the vtk binary out, still some problems with multicomponent datatypes
2014-12-18 21:46:38 +00:00
Martin Diehl
6604d0f8e8
polishing
2014-12-18 19:26:52 +00:00
Philip Eisenlohr
89f8ba979e
Add x,y coordinates of stereographic projection of given direction (pole) in crystal frame.
2014-12-13 00:12:55 +00:00
Philip Eisenlohr
b17dcd7652
added options ’—origin’ and ‘—geom’. Latter interprets the geom-header to derive voxel sizes.
2014-11-18 15:26:59 +00:00
Philip Eisenlohr
461a3fa979
fixed syntax error and added ‘—render’ option to immediately see output on screen
2014-11-18 15:24:09 +00:00
Philip Eisenlohr
a3196669ea
exchanged deprecated data array read function
2014-11-18 15:22:00 +00:00
Philip Eisenlohr
7136db1fd8
fixed syntax error: ’options.error’ —> ‘parser.error’ for error handling
2014-11-18 15:20:57 +00:00
Philip Eisenlohr
99ffa554eb
added ‘1_*’ to ‘*’ as possible column label indicator
2014-11-18 15:20:10 +00:00
Philip Eisenlohr
b5ef329f34
changed default position column format from .x,.y,.z to more standard 1_,2_,3_
2014-11-18 15:18:27 +00:00
Philip Eisenlohr
f6741138e7
had badly messed up the file handling in commit 3630. STDIN did not work, files were not checked for existence…
2014-10-29 13:27:40 +00:00
Martin Diehl
bdd2d55383
small bug fix for last commit
2014-10-24 06:36:01 +00:00
Philip Eisenlohr
13ba71a314
fixed bug where option.condition was altered in processing of first file, thus preventing additional files from seeing the same user input.
...
changed file handle setup to allow for large lists of input files.
2014-10-23 21:23:10 +00:00
Martin Diehl
dc7a4bb978
using damasks extentable option + correct version string
2014-10-16 14:56:44 +00:00
Martin Diehl
ce1f17c9cb
worked on the binary vtk out needed for large datasets
2014-10-14 07:13:13 +00:00
Philip Eisenlohr
23ee538dcb
shortened syntax. fixed undefined file['croak']
2014-10-02 04:49:46 +00:00
Philip Eisenlohr
496c3d4bc8
added line breaks identifier and $Id$ flag
2014-09-25 21:54:42 +00:00
Tias Maiti
78ab14806f
fixed bug in parser option type definition
2014-09-21 17:59:06 +00:00
Martin Diehl
d07a098724
fixed wrong help introduced with last change on 3Dvisualize
2014-09-19 09:50:26 +00:00
Martin Diehl
a7d831de06
forgot to import python module
2014-09-15 10:07:52 +00:00
Martin Diehl
5657119b11
updated post processing test: rotateData is doing something, corrected addDeviator defauls
2014-09-12 14:49:26 +00:00
Martin Diehl
f2c4db0bb5
correcting help and default, some comments
2014-09-12 14:46:12 +00:00
Martin Diehl
afb9a2186b
removed explicit default setting: type='string' and action='store'
2014-09-12 14:14:55 +00:00
Martin Diehl
9ba7851c14
fixed bug in calculation of spherical part. Variables in python functions are intent(inout) in Fortran language!
2014-09-12 13:13:05 +00:00
Philip Eisenlohr
5a159dcdfa
script to add scalar data and/or RGB color tuples to rectilinear VTK file (*.vtr)
2014-09-05 20:28:39 +00:00
Martin Diehl
6cdcdecdfa
post processing scripts are working again.
...
@Philip: definining one offset for shiftData and one factor for scaleData for tensor/vector/special>1 seems to be more reasonable than per component
2014-08-25 21:13:39 +00:00
Martin Diehl
c7837e1f66
changed manual input/output close to class method
2014-08-22 16:58:53 +00:00
Philip Eisenlohr
99e3c9a397
fixed (potentially) buggy rotation of tensors. convention is:
...
with A v = b
v' = R v
A' = R A R^T
such that
A' v' = R A R^T R v = R A v (= R b = b', i.e. old result transformed into other coordinate basis)
2014-08-22 15:32:48 +00:00
Philip Eisenlohr
df27115472
extended "scalar" capabilities to "special" having arbitrary dimension (defaults to 1, i.e. former scalar case). Breaks backward compatibility since "--scalar" is now "--special". However, "-s" still works as before...
2014-08-22 15:25:51 +00:00
Philip Eisenlohr
77df55c998
extended "scalar" capabilities to "special" having arbitrary dimension (defaults to 1, i.e. former scalar case). Breaks backward compatibility since "--scalar" is now "--special". However, "-s" still works as before...
2014-08-21 17:16:43 +00:00
Philip Eisenlohr
9aa22d4a08
simplified column key generation
2014-08-21 16:17:23 +00:00
Philip Eisenlohr
96b16dd97b
reshape "matrix" input data from (currently wrong) 9x1 to 3x3 layout.
...
simplified input validity check.
2014-08-21 16:14:06 +00:00
Martin Diehl
15a6015bc2
added some more post processing tests
...
DAMASK env now reports in MiB (GiB is too big for small machines)
2014-08-07 16:51:26 +00:00
Martin Diehl
649e637561
added some more post processing tests and improved output
2014-08-06 19:06:33 +00:00
Martin Diehl
938352d43a
fixed calculation of size and dimension in case of 2D (was limited to third dim only)
...
plus polishing
2014-08-06 15:25:18 +00:00
Martin Diehl
cbafad50d0
some more work on the postprocessing scripts, decreased test tolerance because spectral decomposition has rounding errors (depending on machine/python/numpy version)
2014-08-06 13:27:09 +00:00
Martin Diehl
a0f9865133
updated to state-of-the art file handling etc
2014-08-04 20:07:20 +00:00
Martin Diehl
7df8f04f65
updated test for postprocessing and improve some of the scripts
2014-08-04 17:53:41 +00:00
Martin Diehl
0b93e7c5a5
corrected addDivergence script. Restarting still not working for new state, needs further investigations: tightend tolerances again
2014-07-27 09:43:00 +00:00
Tias Maiti
e01630e073
fixed bug in tuple assignment
2014-07-25 17:49:22 +00:00
Philip Eisenlohr
bee6e0b09b
added optional weighting column
2014-07-25 16:38:04 +00:00
Martin Diehl
d0ecc0943c
added addPK2 script to test
2014-07-24 21:42:13 +00:00
Martin Diehl
7954c9a4a3
more and improved tests for add...
2014-07-24 20:21:18 +00:00
Martin Diehl
38048a09f2
introduced use of choice for argparse where applicable
2014-07-24 18:47:09 +00:00
Martin Diehl
e5dc9e79cc
some more changes improving the post processing scripts
2014-07-22 14:21:49 +00:00
Martin Diehl
e8d2e787bc
updated first 9 post processing scripts to latest ASCII table handling style
2014-07-21 19:55:05 +00:00
Martin Diehl
2f0ecdf7e8
improved file handling etc. to follow newest style
2014-07-16 16:41:04 +00:00
Martin Diehl
e7c282a02d
some further improvements on ASCII table handling
2014-07-10 09:27:51 +00:00
Martin Diehl
f72a87f94b
polished scripts (option parser, numpy)
2014-07-09 10:07:24 +00:00
Martin Diehl
51b92f3ef9
simplified option parsing (so far, only for addCalculation and addMises)
2014-06-17 07:10:10 +00:00
Luv Sharma
596ee18da9
improved the regex for header reading
2014-06-08 14:43:32 +00:00
Philip Eisenlohr
2f249773c9
fixed missing Python module
2014-06-06 15:11:15 +00:00
Philip Eisenlohr
32b315487c
removed debug printing
2014-06-06 14:46:41 +00:00
Philip Eisenlohr
59e8cd1d7e
new script: Add data in column(s) of second ASCIItable selected from row that is given by the value in a mapping column
2014-06-06 14:35:37 +00:00
Philip Eisenlohr
63c1a0a212
updated to croaking, scriptID, IO-piping.
2014-06-06 09:43:28 +00:00
Philip Eisenlohr
9834c8466c
scripts to scale, shift, and rotate scalar, vector, or tensor quantities of ASCIItables (in-place!)
2014-05-27 08:08:10 +00:00
Philip Eisenlohr
65f1f55a87
added option to pre-rotate orientation (change lab frame)
2014-05-26 14:31:42 +00:00
Philip Eisenlohr
51e7f9eed9
added --reverse option. corrected help hint regarding sorting order
2014-05-23 14:05:58 +00:00
Philip Eisenlohr
06715dc99f
added "no data check" and updated script backbone to be consistent with other scripts (croak).
2014-05-19 13:43:26 +00:00
Tias Maiti
0885ea8023
changed variable interpolation to be useable in connection with dictionary definitions for formulas. Slightly less efficient but now much more powerful...
2014-05-02 19:56:56 +00:00
Philip Eisenlohr
a8a9c8eef5
added possibility to not sort (--sort none) output by its --separation such that the output can be used in conjunction with the VTK files produced by DAMASK.
2014-04-14 21:45:24 +00:00
Philip Eisenlohr
babde13c6a
capture missing --vtk option
2014-04-03 01:00:00 +00:00
Martin Diehl
342ca0be47
tested new scripts to update shebang, all files got same shebang (and for python files encoding)
2014-04-01 18:41:14 +00:00
Martin Diehl
782b54a430
more LF, Id, and executable status changes
2014-04-01 17:52:31 +00:00
Martin Diehl
188002f16e
more LF, Id, and executable status changes
2014-04-01 16:58:54 +00:00
Philip Eisenlohr
16743f8631
explicitly state unbuffered ASCIIoutput
2014-03-28 18:15:37 +00:00
Martin Diehl
0363b1fb04
updated reporting (according to addCauchy)
2014-03-10 14:01:39 +00:00
Christoph Kords
e10f8f1b5e
corrected typo
2014-03-04 16:43:22 +00:00
Philip Eisenlohr
6fd8407d6e
moved "predefined" to colormap init
...
cleaned interpolate to not change color model
fixed color range cropping issue
2014-02-28 16:09:01 +00:00
Philip Eisenlohr
63569b19b6
added use of "defaultdict" from collections
2014-02-28 15:56:28 +00:00
Martin Diehl
27c83f60a6
fixed typo
2014-02-26 15:05:34 +00:00
Philip Eisenlohr
7f08c976c3
skip file if mandatory column not found in ASCIItable
2014-02-26 14:56:06 +00:00
Philip Eisenlohr
98a8b47a09
can now read legacy VTK files with unstructured grid data
2014-02-24 19:23:08 +00:00
Philip Eisenlohr
a659d071a9
added '--degrees' option to indicate Euler angles unit
2014-02-10 18:01:21 +00:00
Philip Eisenlohr
85e4896478
"--degrees" option to specify Euler angles in degrees (instead of radians)
2014-02-09 20:36:42 +00:00
Philip Eisenlohr
3c2af8e7a6
fixed dropped file handle when flushing closed output...
2014-01-29 21:16:44 +00:00
Philip Eisenlohr
24d7f55f55
check whether output is already stopped (in command piping for instance)
2014-01-29 21:13:36 +00:00
Philip Eisenlohr
cd18ec2abf
removed unneccesary table.data_rewind, which breaks command piping
2014-01-29 21:03:56 +00:00
Martin Diehl
ee99216edc
polishing compile_CoreModule, bug fix for Makefile
2014-01-28 07:34:13 +00:00
Philip Eisenlohr
1bd456aa22
corrected options.error --> parser.error
2014-01-27 14:30:37 +00:00
Philip Eisenlohr
a1cfc85d74
produce VTK unstructured grid with voxels around all points given in an ASCIItable.
2014-01-27 14:10:29 +00:00
Philip Eisenlohr
13fed38a2f
add scalar and RGB tuples from ASCIItable to existing VTK voxel cloud (*.vtu)
2014-01-27 14:05:03 +00:00
Martin Diehl
0f101c8dbf
adopted to improved HDF5 format
2014-01-13 16:22:01 +00:00
Martin Diehl
a614e76968
first post processing script for HDF5 output
2014-01-07 20:42:51 +00:00
Philip Eisenlohr
e20ffb379d
changed numpy.readtxt logic from "data_asArray" returning a copy to inplace "data_readArray" now directly storing into self.data
2013-12-14 03:51:22 +00:00
Philip Eisenlohr
600389ac44
new script to sort ASCIItable according to (multiple) columns
2013-12-14 03:48:50 +00:00
Christoph Kords
0f8790c148
clarified help string
2013-12-12 08:48:57 +00:00
Philip Eisenlohr
10c8a1a3ce
corrected typo in usage hint
2013-12-12 02:35:01 +00:00
Philip Eisenlohr
894776ca67
fixed stupid bug addressing a dict by dict{key} instead of dict[key]
2013-12-11 14:30:27 +00:00
Philip Eisenlohr
44b3687e7c
added option to invert output data range (1.0 -- 0.0 instead of 0.0 -- 1.0)
2013-12-10 00:27:22 +00:00
Philip Eisenlohr
e4cea31a9d
small bug fix: options.error --> parser.error
2013-12-09 15:58:35 +00:00
Philip Eisenlohr
e2d4cc8b3d
fixed former nonsense definition of lab frame direction
2013-12-09 15:57:21 +00:00
Philip Eisenlohr
26690859bb
deal more gracefully with problematic user input.
2013-12-09 15:54:47 +00:00
Philip Eisenlohr
090fca8683
deleted left-over debug statement
2013-11-26 20:24:40 +00:00
Philip Eisenlohr
d498eca242
deleted left-over debug statement
2013-11-26 20:22:52 +00:00
Philip Eisenlohr
b63d2eafe8
new scripts for:
...
-generating vtk point cloud from x,y,z ASCIItable data
-adding scalar values and color tuples from ASCIItable to vtk point cloud
-permuting data in ASCIItable columns (used to shuffle ordered grain indices)
2013-11-26 20:19:27 +00:00
Philip Eisenlohr
a45c7dbb62
new ASCIItable scripts to add
...
- quaternion and/or Euler representation of lattice orientation (given in rotation matrix, etc.)
- RGB color code of crystal direction in laboratory frame (matching closely the TSL-OIM scheme of inverse pole figures).
2013-11-25 19:11:02 +00:00
Martin Diehl
feaccae652
set threshold for values treated as zero to 1.e-12 (was 1.e-15) to avoid flip in strain direction
2013-11-19 19:39:14 +00:00
Martin Diehl
1915215c6f
commented out not working use of vtk class
2013-09-20 11:27:11 +00:00
Martin Diehl
a17b85cba8
deleted wrong colormap script, was there twice. correct one (modified recently by Philip) is called perceptualUniformColormap
2013-09-11 08:15:05 +00:00
Martin Diehl
022696c8f3
fixed output to screen
2013-09-11 07:45:42 +00:00
Philip Eisenlohr
538a471246
updated $Id$ handling.
...
added (colored) my script's name reporting.
2013-09-09 14:12:00 +00:00
Philip Eisenlohr
ec6587e7f5
corrected help message
2013-09-09 14:11:16 +00:00
Christoph Kords
26df077c2a
translating scalar data that contain vector components to vector data
2013-07-22 08:24:04 +00:00
Martin Diehl
a39005ef1c
added possibility to specify formula with array return type
...
added support for numpy
2013-07-16 21:48:23 +00:00
Philip Eisenlohr
0fa9f7dc22
can now show data for tables lacking column labels (use option --nolabels)
2013-07-08 11:56:16 +00:00
Martin Diehl
e3a1e70542
started to use vtk class for writing results
2013-06-27 18:21:20 +00:00
Christoph Kords
13227dff0f
corrected calculation of origin
2013-06-22 14:13:29 +00:00
Christoph Kords
0740845d81
allow coordinates to not be in consecutive columns
...
keep origin of original data set
2013-06-20 07:36:35 +00:00
Christoph Kords
e6499e1a39
renamed script in order to distinguish from "add" scripts that act on ascii tables
2013-06-13 09:05:30 +00:00
Martin Diehl
becacb675a
linear reconstruction no longer needed for odd resolution
2013-06-05 14:05:11 +00:00
Martin Diehl
e635b06270
last polishing on preprocessing scripts, documentation and scripts are all up to date.
...
added addSchmidfactors to post processing scripts
2013-06-04 12:56:57 +00:00
Philip Eisenlohr
32a16f9745
wildcard matching for column headings, e.g. "[159]_p" to extract only the diagonal elements (scalars) of stress, or "[1-9]_p" to extract all nine values.
...
fixed VTK file format problem where double precision floats were incorrectly interpreted because they were announced as "float" (now "double").
2013-05-29 10:24:00 +00:00
Christoph Kords
837574278e
removed (now) unused function for reading of configFile
2013-05-28 14:47:50 +00:00
Christoph Kords
10a32dc17b
use predefined maps in damask.Colormap class; no need for a colorMap config file anymore
2013-05-28 14:18:21 +00:00
Philip Eisenlohr
8fd590d7bd
added red--blue map
2013-05-24 07:41:44 +00:00
Christoph Kords
19dc95a915
now able to choose vector that is used for warpvector filter via option.dispLabel
2013-05-22 21:23:01 +00:00
Christoph Kords
75ee54146b
deleted unused function
2013-05-22 21:20:00 +00:00
Martin Diehl
53348db000
tested the modified scripts, all scripts generating geometry now named geom_from...
2013-05-15 16:02:38 +00:00
Christoph Kords
deb2bd7dca
added option to only process ip or node based geometry/data
2013-05-13 10:06:40 +00:00
Christoph Kords
7f7cd0732d
improved visualization of script results
2013-05-13 09:36:19 +00:00
Christoph Kords
193c77f526
corrected prediction of computation time
2013-05-09 11:33:40 +00:00
Christoph Kords
ed1674ee1c
changed default value of eulerangles label
2013-05-09 11:32:34 +00:00
Christoph Kords
2d4cb6d128
first point on slice always starts at (0,0)
...
added option to visualize results
2013-05-08 15:59:51 +00:00
Christoph Kords
bd33169118
mistakenly committed table2ang in rev 2380, instead of vtk2ang. reverted changes in table2ang
2013-05-08 15:58:17 +00:00
Christoph Kords
ed9413a008
added simple output about progress
2013-05-07 14:32:38 +00:00
Christoph Kords
543cbf3a14
first point on slice always starts at (0,0)
2013-05-07 13:18:26 +00:00
Christoph Kords
c7f987a3c1
"unitlength" parameter, which determines the physical size of the mesh, now available as a global mesh variable "mesh_unitlength" and written to the .mesh file during init.
...
Hence, it is available to the marc_deformedGeometry.py script via "mesh_init_postprocessing()" and "mesh_get_unitlength()", so no need for setting the scaling of the displacement vectors explicitly through an option; now displacements and nodal positions are always consistent
2013-05-07 13:06:29 +00:00
Christoph Kords
9656d06fcc
- all length in nag file in micrometer
...
- "size" option replaced by "scale": uniform scaling of all length
- default normal in negative z-direction
- more output in verbose mode
- ang file numbering starts with 1
- positions in ang file in TSL, not lab frame
2013-05-07 12:57:34 +00:00
Christoph Kords
278198121d
only import vtk classes that were used
2013-05-06 16:55:44 +00:00
Christoph Kords
f5482ffbf4
new script that generates ang files for slices through vtk data set
2013-05-06 16:37:54 +00:00
Christoph Kords
43647fc5e6
use datatype double instead of float for ouputs
2013-04-30 14:45:29 +00:00
Christoph Kords
12ca2c1931
added scaling option for displacements
2013-04-29 16:02:30 +00:00
Christoph Kords
9afaa9f4d0
set "line breaks" and "keywords" property
2013-04-29 09:24:07 +00:00
Christoph Kords
fbb8353bba
check if data set attribute is already present
2013-04-29 09:23:16 +00:00
Christoph Kords
cc72c0b17b
added two new scripts:
...
"marc_extractData" is a simple variant of the "postResult" script that extracts all data from a macro *.t16 file (quadratic elements not yet supported) and writes it into an asciitable
"addDataToGeometry" searches for corresponding *.txt and *.vtk file in a given directory and adds the data from the *.txt file as SCALARS to the *.vtk file
first script needed an additional function in mesh that returns the corresponding node of a given ip in a specific element
2013-04-28 20:56:17 +00:00
Christoph Kords
650b7ef4ac
added python script that produces vtk files with the (node based and ip based) deformed mesh from marc output file
2013-04-23 18:30:56 +00:00
Philip Eisenlohr
b572c71db0
fixed small bug in error reporting (missing column head complaint was broken...)
2013-04-16 20:10:17 +00:00
Martin Diehl
b4f67248a5
deleted two simple scripts used for debugging but with almost no use any more
2013-04-12 13:22:15 +00:00
Martin Diehl
770712529d
one more bug fix related to scaling
2013-03-26 16:16:59 +00:00
Martin Diehl
ccef9d4f73
fixed scaling option
2013-03-26 14:18:29 +00:00
Philip Eisenlohr
5b96c1d62a
scaling of deformation gradient fluctuations now possible in x,y,z independently (give array).
2013-03-22 15:09:55 +00:00
Martin Diehl
cd86a80c2b
corrected handling of default value and cases where the deformation gradient is not f
2013-03-19 18:22:14 +00:00
Martin Diehl
43ec1d2051
added output of perceptual unfiform colormaps to GOM (DIC Aramis) format, deleted some old files in the documentation folder
2013-03-19 15:19:46 +00:00
Martin Diehl
757c3e5a04
fixed bug in averageDown and updated test
2013-03-13 16:23:02 +00:00
Philip Eisenlohr
30024af6c2
polished string concatenations
2013-02-14 21:33:11 +00:00
Philip Eisenlohr
a7e7a857c3
readjusted color values to work nicely with Msh colorspace (as in ParaView)
2013-02-02 20:17:54 +00:00
Philip Eisenlohr
ac562f4b8b
changed internal color mapping to damask.Colormap class
2013-02-02 15:12:43 +00:00
Martin Diehl
e74b5da19a
changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
...
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
Philip Eisenlohr
963ff0c3ae
added support for tetrahedron element with 4 integration points (Marc ID 127)
2013-01-28 16:25:43 +00:00
Pratheek Shanthraj
e691ff1ea1
updated setup_processing and corrected descriptions for new scripts
2013-01-22 09:56:36 +00:00
Pratheek Shanthraj
a4abebfcbb
some potentially useful postprocessing scripts
2013-01-21 23:15:23 +00:00
Mahesh Balasubramaniam
5676330e93
parsing options and file handling for perceptually linear diverging and sequential colormaps
2013-01-18 17:15:30 +00:00
Philip Eisenlohr
e51779579e
removed (unsupported) "--geom" option.
2013-01-18 13:01:43 +00:00
Mahesh Balasubramaniam
7ac7d1a657
new tool for creation of colormaps, now using proper classes
2013-01-15 18:24:10 +00:00
Mahesh Balasubramaniam
cd5197556b
sequential colormapping with options for desired color and type(increasing or decreasing) is now working
2013-01-04 19:50:39 +00:00
Mahesh Balasubramaniam
820b8eb2c1
put colormap related functions into library, renamed and added scripts for creation of colormaps
2013-01-04 13:57:36 +00:00
Mahesh Balasubramaniam
6ab79d5593
added options for parsing and the colormap. Customized colormap is written out as an xml file importable into paraview.
2013-01-04 12:04:05 +00:00
Mahesh Balasubramaniam
3242361c91
added a minor change to the string expression and the for loop.
2013-01-04 12:01:34 +00:00
Mahesh Balasubramaniam
7157e8f03c
changed some of the color-space conversion formulae.
2013-01-04 12:00:10 +00:00
Pratheek Shanthraj
a69aaa1315
Use scipy euclidean distance function instead of FMM (runs without skfmm
...
module installed)
2012-12-19 14:50:45 +00:00
Martin Diehl
260e4191a0
replaced tabs by spaces
2012-12-13 18:15:10 +00:00
Philip Eisenlohr
dfb791bcaf
only complain about missing Mentat release if needed...
2012-12-12 08:33:42 +00:00
Christoph Kords
34645a7222
write warning about missing Mentat release to stderr instead of stdout
2012-12-12 08:21:59 +00:00
Christoph Kords
93d822aaa1
symmetric colormap always with pure white in the middle
2012-12-11 16:50:34 +00:00
Pratheek Shanthraj
726d1173e5
polishing
2012-12-07 17:46:28 +00:00
Pratheek Shanthraj
c4ef2e5925
bug fixes
2012-12-07 17:41:50 +00:00
Pratheek Shanthraj
eaf7072bc1
Vectorized checking of neighbourhood for unique microstructure
...
(faster)
M addEuclideanDistance.py
2012-12-07 10:50:34 +00:00
Philip Eisenlohr
a37250eef4
script to add the Euclidean distance map from boundaries, triple lines, and quadruple points to an ASCIItable of a regular grid.
...
requires numpy, scipy, and skfmm...
2012-12-06 21:49:49 +00:00
Philip Eisenlohr
2d4cf7da74
conditions can handle string data.
...
use "#s#label#" format to indicate that column headed by "label" contains strings (not floats)...
2012-12-03 14:29:21 +00:00
Philip Eisenlohr
7d96bb7ce8
Add column(s) containing directional stiffness based on given cubic stiffness values C11, C12, and C44 (in consecutive columns)
2012-12-03 13:10:16 +00:00
Philip Eisenlohr
faa5f3c459
corrected severe bug in (non-logarithmic) strain calculations..!
2012-11-30 15:02:25 +00:00
Philip Eisenlohr
72159e867c
fixed buggy file handling for multiple input files
2012-11-30 11:03:53 +00:00
Philip Eisenlohr
74f62c891d
slightly safer file closing strategy
2012-11-30 08:38:52 +00:00
Philip Eisenlohr
9fb838fd28
changed switch from "sequential" to "column"
2012-11-30 08:29:34 +00:00
Philip Eisenlohr
1bd6bcfe3d
script to list info, labels, and/or data of an ASCIItable
2012-11-30 08:26:13 +00:00
Philip Eisenlohr
f446d4d87e
added wildcard matching ( "?", "*", "[(!)sequence_of_characters]" ) for ASCII table labels
2012-11-29 10:42:13 +00:00
Philip Eisenlohr
255af58434
post processing script to add eigenvalues and eigenvectors to tensorial data in ASCII tables.
2012-11-23 21:49:30 +00:00
Martin Diehl
78c22d8449
corrected label in case of divergence of tensor, now using correct notation for scalar: divFFT(data) instead of 1_divFFT(data)
2012-11-21 10:31:52 +00:00
Martin Diehl
b988caa6ba
added script to add deviatoric and hydrostatic part of a tensor to ASCII table
2012-11-14 10:46:51 +00:00
Martin Diehl
1fc59107fa
removed debug statement in averageDown.py, deleted obsolete spectral_iterationCount.py (new solver will report statistics anyway and most probably the current count does not work as the screen output was modified)
2012-10-31 10:06:11 +00:00
Martin Diehl
b9aa50c59a
improved performance for large packing values
2012-10-26 12:59:43 +00:00
Martin Diehl
573c4702eb
fixed bug in averageDown.py and added test to check its features
2012-10-17 15:05:26 +00:00
Martin Diehl
dcff640926
fixed handling of given resolution and dimension
2012-10-17 10:04:13 +00:00
Martin Diehl
6c7affc43f
improved performance (hopefully)
...
now each new element gets a new ID, running from 1 to N for N elements
2012-10-16 18:06:02 +00:00
Philip Eisenlohr
1004d744f2
output speed-up by *show_table/*show_model masking
2012-10-05 21:49:33 +00:00
Martin Diehl
c377dae9a6
added option to create hexagonal grid (2D slices only, according to P. Konijnenbergs experience on 3D ang)
2012-10-05 17:25:54 +00:00
Martin Diehl
6d97a92913
further improvements on the conversion, seems to work quite good for the 2D case now
2012-09-28 12:10:10 +00:00
Martin Diehl
6619717baf
improved the conversion of tables to ang files
2012-09-26 12:20:14 +00:00
Philip Eisenlohr
dc55e30cf1
added "startingIncrement" to spectralOut result interpretation
2012-09-05 15:14:36 +00:00
Martin Diehl
b7dc9f9944
renamed spectral_buildElements.py to nodesFromCentroids.py and added first simple version of an ascii table to ang converter
2012-08-30 17:01:46 +00:00
Martin Diehl
3f99d2bb65
further improved prefix handling
2012-08-27 09:39:57 +00:00
Martin Diehl
96ba5ecae4
moved some more 'mesh related' functions for post processing from math.f90 to mesh.f90
...
f2py functions remaining in math.f90 now uses assumed size arrays in order to have simpler interfaces. This is only working with python 2.7!
changed python pre- and postprocessing scripts.
If you encounter any problems whith core modules, try to remove the old core.so in the lib/damask
2012-08-27 08:04:47 +00:00
Mahesh Balasubramaniam
975c3437ac
added possibility to use comma in functions, to prevent splitting substituted by ';'. Eg. round(4.021,1) becomes round(4.021;1) in command line call
2012-08-22 17:47:34 +00:00
Christoph Kords
4cfc302cdd
put prefix in front of the filename, not the directory name
2012-08-03 13:14:51 +00:00
Mahesh Balasubramaniam
3d7bc40520
added output of defaults for mesh, points, and box to help
2012-08-02 13:22:57 +00:00
Martin Diehl
13caf2d389
made linear shape reconstruction working again, pretty similar results like corrected FFT reconstruction
2012-07-18 18:39:59 +00:00
Philip Eisenlohr
b30584b8d7
added "()" to file.close command
2012-07-03 12:33:11 +00:00
Philip Eisenlohr
925759000c
added option to select data separation character from a choice of:
...
newline
tab (default)
space
2012-06-19 16:00:59 +00:00
Philip Eisenlohr
376ec2cd94
add option to output double, triple, and quadruple scalars
2012-06-19 15:30:16 +00:00
Taymor El Achkar
98b790004a
Adding Second Piola-Kirchhoff data Coloumns (addPK2).
...
Integrating Stress-Strain table Data numerically (integrate.py).
2012-06-12 14:09:16 +00:00
Philip Eisenlohr
34ef08c762
added unique naming of output file
2012-05-07 20:36:58 +00:00
Philip Eisenlohr
a84838d3ba
removed erroneous print statements (leftover from debugging)
2012-05-07 19:28:21 +00:00
Philip Eisenlohr
c9e17319ec
now with correct ID and LF line endings... ;-)
2012-05-07 19:11:46 +00:00
Philip Eisenlohr
361b7ad398
new script to generate a twoD probability density map from ASCIItable data
2012-05-07 19:09:11 +00:00
Philip Eisenlohr
c2954a2b33
now all heading labels squeeze out whitespace from their name.
2012-05-05 18:43:48 +00:00
Philip Eisenlohr
28e9b483ad
corrected wrong byte offset when reading thru 2^31-1-8 four-byte limit
2012-05-01 22:42:45 +00:00
Martin Diehl
99f2b8603a
new script for reconstruction of elements from F/IP(spectral_buildElements.py), corrected spectral_randomSeeding.py, made post/postResults.py aware of additional header/footer for file positions larger than 2**31-1
2012-04-24 15:09:20 +00:00
Martin Diehl
335df4346f
deleted accidentally checked in file
2012-04-19 11:52:01 +00:00
Martin Diehl
31753be16f
updated setup/setup_processing.py with new files
...
added data_readLine(LINE) and data_skipLines(LINES) for ascii table
2012-04-18 11:42:57 +00:00
Martin Diehl
17f644b261
new scripts to add deformed configuration to ASCII table and for generation of layered 2D geometries (EBSD)
...
addCompatibilityMismatch.py is now using functions from ASCII table library
2012-04-18 09:58:59 +00:00
Philip Eisenlohr
33ab391c14
added total increment column
2012-03-14 15:05:49 +00:00
Christoph Kords
ac5b6233e6
initialize lastIncrement to 1
2012-03-14 14:59:20 +00:00
Philip Eisenlohr
9b17015b5a
added option for nodal quantity output (uses "linear" translation).
...
improved stability when requesting non-existing increments.
2012-03-05 15:22:10 +00:00
Christoph Kords
dc7234fd02
new option "--suffix" adds a suffix to the filename
2012-02-28 14:24:45 +00:00
Christoph Kords
10e93244c1
writing info to stdout instead of stderr
2012-02-28 13:21:59 +00:00
Philip Eisenlohr
fc40291f38
script to add a suffix to specified ASCIItable labels
2012-02-24 08:53:19 +00:00
Philip Eisenlohr
53d7076d05
remove the info part from ASCIItables
2012-02-23 13:53:50 +00:00
Philip Eisenlohr
a2b46c8a36
columns can be called by index
...
now pipe-aware...
2012-02-23 13:53:12 +00:00
Martin Diehl
d68a3d1869
added LF=UNIX to a bunch of files
2012-02-22 13:30:00 +00:00
Philip Eisenlohr
ff4c281ed2
fixed whitelist/blacklist behavior (blacking out overrides whitelisting)
...
now broken pipes stop script's outputting.
2012-02-16 18:47:07 +00:00
Philip Eisenlohr
a994b4bcc9
fixed problem when condition was empty
2012-02-16 18:00:40 +00:00
Martin Diehl
f2729255f8
changed name in install script, small corrections on regex
2012-02-16 15:15:43 +00:00
Philip Eisenlohr
1bad5bf3c7
removed --count option. introduced 'internal' column #_row_#. adopted polished column head identification developed in filterTable. wiki updated.
2012-02-16 11:56:16 +00:00
Martin Diehl
9f45cb3745
new option: -c --count: count rows in ascii table and add column "row" with row number
2012-02-16 11:16:36 +00:00
Philip Eisenlohr
edd5adafd0
now with ID and correct line endings...
2012-02-16 08:58:07 +00:00
Philip Eisenlohr
37bd65ea34
script to filter an ASCIItable by condition. each row is evaluated against the condition, columns can be black- or white-listed (white wins)...
2012-02-16 08:36:35 +00:00
Martin Diehl
11d3c7a317
new spectra_parseLog searches through spectral log file and parses all possible output to an ascii table
2012-02-15 20:08:35 +00:00
Martin Diehl
b153a762cb
now using damask.core.math
2012-02-15 19:34:43 +00:00
Christoph Kords
bd32f1bf1a
adapting to current format of spectral out file
...
now using regular expressions to match "magic" lines
2012-02-15 12:07:00 +00:00
Philip Eisenlohr
8671b8ed38
script to delete existing columns from ASCIItable
2012-02-14 12:04:37 +00:00