Christoph Kords
8c849d62ee
small corrections for how to treat the new deltaState in FPI and euler integration; all integrators successfully tested with j2
2012-05-18 13:00:15 +00:00
Christoph Kords
abbae76c51
instantaneous jumps in the state by constitutive_deltaState are now incorporated for all state integrators. still they (should) not influence the result, since all constitutive laws simply return zero for the deltaState
2012-05-17 15:25:21 +00:00
Christoph Kords
351c2c6e65
deltaState depends on the current state, no the state at the beginning of the timestep
2012-05-17 12:18:30 +00:00
Christoph Kords
f6d5efeed3
removed arguments Fe and Fp from collectDeltaState function call
2012-05-17 11:04:22 +00:00
Christoph Kords
a54439e3b5
dotState does not have to be reset to zero. this is a remnant from older versions when the dotState for the nonlocal model used to be updated by the neighboring integration point
2012-05-16 15:35:14 +00:00
Christoph Kords
84d4652a07
all constitutive modules now contain a new function "deltaState", which in the future allows to have an instantaneous and incremental change of the state (additional to the rate based evolution with dotState).
2012-05-16 14:43:26 +00:00
Franz Roters
df2d520630
stripping abaqus comments is now aware of damask comments
2012-05-15 14:59:26 +00:00
Franz Roters
701cf2e71b
replaced duplicated math entry by missing mesh entry
2012-05-15 14:58:47 +00:00
Martin Diehl
0d745adfa0
corrected NaN in prec_single.f90 (was already silent but with typo), polished output and added switch in order to check range on all files except of prec.f90 (in which NaN is defined)
2012-05-11 12:46:17 +00:00
Franz Roters
7ee368f324
check whether there is any constitutive output
2012-05-11 07:38:20 +00:00
Franz Roters
f8f9c089d6
check for NaN in math_QuaternionInSST
2012-05-11 07:37:32 +00:00
Franz Roters
babf2647fb
use non signaling version of NaN
2012-05-11 07:35:52 +00:00
Martin Diehl
ce83026965
corrected bug in fft based geometry reconstruction causing mirrored geometries
2012-05-09 14:56:25 +00:00
Taymor El Achkar
d11aa15a67
changed indices counting (fortran to python style, easier division to get rid of periodic copies)
...
corrected f2py pyf file
2012-05-09 10:09:56 +00:00
Krishna Komerla
fbd075dc6e
corrected automatic determination of resolution
2012-05-08 15:12:43 +00:00
Krishna Komerla
c752dd5474
regridding is now working, changed the subroutine into a function
...
changed order of arrays in nearest neighbor search to make it fortran fast
constitutive.f90 and homogenization.f90 write state size out during initialization
setup/setup_processing.py is using byterecl to be compatible with binary files written out by solver
2012-05-08 14:57:06 +00:00
Taymor El Achkar
a9a72cee97
fixed bug in nearest neighbor search, corrected error message for kdtree2.f90
2012-05-08 13:16:59 +00:00
Franz Roters
eb8265b914
fixed potential division by zero error discovered by our American friends
2012-05-08 07:16:00 +00:00
Pratheek Shanthraj
bdc46a8828
using better measure (norm) of phase contrast for preconditioning
2012-05-07 08:12:13 +00:00
Krishna Komerla
4b18278781
reworked neares neigbor search subroutine, now also works for voronoi tesselation (general nn search in periodic cell)
2012-05-04 13:07:37 +00:00
Martin Diehl
863f0c766e
removed line continuation causing trouble
2012-05-04 08:19:12 +00:00
Martin Diehl
b4775249e8
corrected standard check to make f2py working with gfortran
2012-05-03 17:12:36 +00:00
Martin Diehl
26c6063a2c
utf8 encoding output to screen now for all solvers using intel ifort>10 or any gfortran (old versions might not support it, but we don't use them anyway)
2012-04-28 10:46:41 +00:00
Philip Eisenlohr
dbeac18df6
no more dropping of comments in Abaqus input file assembly
2012-04-27 14:33:39 +00:00
Krishna Komerla
83e89fba3c
improved regridding, especially interfacing to python (also for nearest neighbor search)
2012-04-24 17:02:27 +00:00
Krishna Komerla
e33c34d86b
corrected wrong integer arithmetics in calculation of coordinates in DAMASK_spectral.f90
2012-04-24 16:59:38 +00:00
Philip Eisenlohr
83e22c00a2
added missing allocation of slopeLnRate array.
...
changed parsing to lowercase name.
2012-04-20 12:18:38 +00:00
Martin Diehl
d2c4874db3
several small corrections/polishing
2012-04-20 11:58:41 +00:00
Pratheek Shanthraj
c889d20ba0
added simple preconditioning to improve convergence for high phase contrast materials in standard algorithm
2012-04-20 09:42:57 +00:00
Philip Eisenlohr
caff3124fd
changed multiplier keyword from "times" to "copies of" to prevent ambiguity.
2012-04-17 10:05:49 +00:00
Philip Eisenlohr
dbc5a3a3ce
subnodeparent check is now running only over actual number (not max) of parent nodes...
2012-04-17 09:19:44 +00:00
Martin Diehl
f905a97cdf
fixed bug (causing sigsev) concerning new functions mesh_spectral_get***
2012-04-12 08:03:08 +00:00
Martin Diehl
8c559cbdc9
fixed bug concerning file handling.
2012-04-11 18:46:36 +00:00
Martin Diehl
37fa6c2e14
merged code for python and spectral solver interfacing (shared most of it anyway).
...
put functionality for getting header information (dimension, homogenization, resolution) in functions in mesh.f90
2012-04-11 17:28:08 +00:00
Martin Diehl
a18e5e48dc
added 'times' keyword in function for continuous int values: "4 times 1 => 1 1 1 1", mainly for geom files of spectral solver.
...
corrected name for contin"U"ousIntValues functions
2012-04-11 17:24:50 +00:00
Martin Diehl
91cfd21c88
corrected some copy and paste errors
2012-04-11 14:12:30 +00:00
Martin Diehl
9a92d343dc
added Onurs modified description for tausat in j2 law.
...
Polishing phenopowerlaw
2012-04-11 14:01:02 +00:00
Martin Diehl
f2da887899
added missing ":" in mesh.f90, introduced absolute stress tolerance for spectral solver in numerics.config/numerics.f90
2012-04-11 12:57:25 +00:00
Krishna Komerla
f20cecd421
integrated subroutine for regridding into mesh.f90 and made it available for python
2012-04-10 15:15:46 +00:00
Krishna Komerla
d638c563af
reworked python - fortran interfacing
2012-04-10 13:30:34 +00:00
Martin Diehl
b17740c9c3
corrected misplaced line for linear guessing
2012-04-06 14:23:06 +00:00
Christoph Kords
79592d2f0f
get debug info for spectral solver as well
2012-04-05 09:17:09 +00:00
Martin Diehl
990f547091
improved AL solver, now using guesses for P(x) to improve performance. Changes (and whole solver) still experimental
2012-03-31 12:41:46 +00:00
Christoph Kords
91a70b0fb3
before turning terminally ill report at which g,i,e crystallite did not converge
2012-03-30 13:16:45 +00:00
Martin Diehl
c29ae95af7
new version of AL spectral solver (seems to work, but still experimental)
...
new concept of DAMASK for Python: Now using also IO.f90, debug.f90 etc. instead of mimicing their necessary function. This needs DAMASK_python.f90 and DAMASK_python_interface.f90 (At the moment more or less copies of respective spectral files).
polished and renamed the scripts for converging ang files
renamed voronoi_randomSeeding.py to spectral_randomSeeding.py
2012-03-29 19:54:31 +00:00
Martin Diehl
17826d7c98
now initializing planner flag for fftw with useful value even if init wasn't executed
2012-03-26 10:03:39 +00:00
Franz Roters
7947ae36b3
changed default value of err_div_tol
2012-03-22 10:33:54 +00:00
Franz Roters
00de182873
corrected if statement to check assembly of input files
2012-03-22 07:44:46 +00:00
Martin Diehl
44d8282863
corrected reading in of ABAQUS debug modes and made numbering scheme for debugging depending on variables hoping to prevent these errors in debug.f90
...
Put all (now public) logicals in FEsolving.f90 again into one specification statement
2012-03-21 18:04:52 +00:00
Martin Diehl
15dd860de9
new switch "SOLVER", set it to SOLVER=AL to compile the Augmented Lagrange version of the spectral solver
2012-03-21 18:01:25 +00:00
Pratheek Shanthraj
131c9ac93e
dPdF calculations made consistent with constitutive_TandItsTangent
2012-03-21 15:00:36 +00:00
Franz Roters
8a2f2c5a95
stress iteration loop now uses generalized elasticity by calling TandItsTangent
...
the anlalytical tangent calculation should now be adopted to also use TandItsTangent
2012-03-21 10:57:27 +00:00
Franz Roters
8d8a8103eb
lastIncConverged, outdatedByNewInc, and cutBack need to be public as well!
...
please keep in mind the FEM interfaces which also need to work!!!
2012-03-21 07:51:07 +00:00
Martin Diehl
dbdc7ddfa2
debug.config, debug.f90, DAMASK_abaqus_exp.f, DAMASK_abaqus_std.f: changed to new debug scheme (wasn't working)
...
lattice.f90, FEsolving.f90: explicitly defined public functions and variables, all others are now private
numerics.f90: changed output format of real numbers, now instead of 0.1eX 1.0e(X-1) is printed to screen
Makefile: now using correct Optimization flags for OPTIMIZATION=AGGRESSIVE
DAMASK_spectral_AL.f90: improved, but still testing. Stress BCs now seem to be handled correctly
2012-03-20 18:01:31 +00:00
Martin Diehl
04d83ec9cd
added "-assume byterecl" in Makefile for ifortran to specify with "recl=" the size of the file in bytes instead of 4byte chunk when opening files. (same as in gfortran per default).
...
no important changes in other files
2012-03-20 12:26:21 +00:00
Philip Eisenlohr
012d568cf8
slightly restructured divergence debug output
2012-03-19 16:41:55 +00:00
Martin Diehl
632d57cc31
corrected div calculation regarding dimension and resolution
2012-03-19 13:19:15 +00:00
Christoph Kords
5263366615
adding switch in material.config for short range stress correction
2012-03-15 14:58:12 +00:00
Christoph Kords
7330031579
corrected special treatment of periodic images in calculation of stress correction
2012-03-15 10:08:08 +00:00
Philip Eisenlohr
d4463fe56a
shifted location of elasticity part closer to plasticity... (constitutive has been shaken back and forth quite a bit today ;-] )
2012-03-15 09:51:33 +00:00
Christoph Kords
ea634d978a
adapted comments to recent change
2012-03-15 09:47:32 +00:00
Franz Roters
b7fc4fe6e4
fixed one last typo, now it finally compiles, sorry for this!
2012-03-15 09:42:33 +00:00
Franz Roters
4d90d90886
last comment also holds for this one
2012-03-15 09:25:15 +00:00
Franz Roters
70a44fbbdd
constitutive models need to skip new keyword elasticity when reading their arameters
2012-03-15 09:22:24 +00:00
Christoph Kords
503f6ed040
i think it's elasticity not elaticity, right?
2012-03-15 08:46:51 +00:00
Franz Roters
36edb4dd9f
introduced keyword elasticity in material.config
...
added constitutive_TandItsTangent and special version constitutive_hooke_TandItsTangent
those are however not yet used and need to be tested
2012-03-14 16:16:11 +00:00
Christoph Kords
9cbbb7cab5
Dead dislocations are treated the same as mobile dislocations for the flux part though they do not contribute to slip. By that the pileup of dead dislocations is able to diminish with time (kinetics are the same as for the glide part; this is not correct but gives valuable results). Also remobilization of dead dislocations at neighbor is taken into account for flux.
2012-03-14 15:32:50 +00:00
Christoph Kords
6bca2150f2
local stress correction of gradient in dead dislocations and neighboring excess density is additive
2012-03-14 15:24:19 +00:00
Christoph Kords
06c93435f2
viscosity term in kinetics law proportional to resolvedstress minus forest term
2012-03-14 15:18:36 +00:00
Pratheek Shanthraj
c2f5cebacb
simplified analytic jacobian calculation. removed Lpfrac, time_sensitive. introduced rate_sensitivity flag when calling crystallite_stressAndItsTangent that is currently set to .false. and is to be set according to which dPdF the FE solver is asking for
2012-03-14 13:56:50 +00:00
Christoph Kords
2b5ed4ab93
corrected name of makefile (first letter upper case)
2012-03-14 11:58:05 +00:00
Christoph Kords
d2652cae47
multiplication only controlled by screws
2012-03-13 14:19:36 +00:00
Franz Roters
433d8a338c
missed several occurences of constitution
2012-03-12 14:43:19 +00:00
Franz Roters
c9ed989dad
replaced keyword constitution with plasticity in preparation of upcomming generalized elasticity
2012-03-12 14:09:37 +00:00
Martin Diehl
efd653fb00
removed old *.output* and *.spectralOut as they are not updated anyway from reference.
...
introduced a numbering scheme for variants
calculated new reference results due to slight changes
2012-03-09 16:30:42 +00:00
Martin Diehl
ac5dd14c5f
removed some small bugs in IO.f90 (related to initialization of variables)
...
DAMASK_spectral.f90 adopted to new debug scheme, substituted print with write statements
2012-03-09 15:22:52 +00:00
Martin Diehl
bd9667bd4b
added new, flexible debugging scheme.
...
now all modules have their own debug specification.
compiles and runs, I hope nothing is broken
did a lot of polishing
2012-03-08 20:25:28 +00:00
Martin Diehl
dec9451b1e
first draft of the Augmented Lagrangian based algorithm, still experimental
2012-03-07 17:37:40 +00:00
Martin Diehl
2a7888c7e1
removed (in IO.f90) a dangerous initialization statement.
...
Please read http://www.cs.rpi.edu/~szymansk/OOF90/bugs.html#4
for more details.
Other files are just a little bit polished
2012-03-07 10:07:29 +00:00
Martin Diehl
d00c3c9e19
added error for to IO to substitute stop statement in kdtree2
...
explicitly defined all functions in as either public or private in the modules to have a quick overview on all functions and parameters that are available
2012-03-06 14:52:48 +00:00
Pratheek Shanthraj
17e9698659
added time_sensitive flag to ignore or add time sensitive component to analytic jacobian (should be close to perturbed jacobian when ignored)
...
now uses sub_dt for analytic jacobian calculations
bug fixes
2012-03-01 19:42:43 +00:00
Martin Diehl
df03dee91c
improved readability, removed archive statements. With new option FASTBUILD=YES build without any warnings etc
2012-03-01 19:34:42 +00:00
Nan Jia
211f66a728
added elastic stiffness matrix as crystallite output
2012-03-01 13:06:09 +00:00
Pratheek Shanthraj
040e244993
Added stress-order terms to analytic stiffness
2012-02-27 17:40:28 +00:00
Pratheek Shanthraj
99d6dcecb5
fixed bug in calculation of analytic jacobian (should work much better now). parallelized analytic jacobian calculation loop
2012-02-24 14:07:46 +00:00
Martin Diehl
f2ee67d03d
disabled multi file optimization when setting OPTIMIZATION=OFF and improved comments on compiler switches
2012-02-24 13:38:15 +00:00
Franz Roters
1042ac018f
output values used for Lp_frac and analyticJaco
...
improved comment for Lp_frac on numerics.config
2012-02-24 08:21:18 +00:00
Martin Diehl
478a6d110c
mixed things up, did not want to commit constitutive_nonlocal.f90 but rather DAMASK_spectral.f90!!!!
...
did a lot of polishing on constitutive_nonlocal.f90 (mostly checked in at last commit), for changes on DAMASK_spectral.f90 see previous message
2012-02-23 17:20:57 +00:00
Martin Diehl
a98832100f
introduced itmin parameter for spectral code for defining minimum number of cycles
...
removed simplified_algorthim flag because the basic scheme using the polarization field will not be implemented
introduced divergence_correction flag for making divergence criterion resolution-independent (still experimental and not set by default)
corrected output and restart frequency (now modulo on incs of current load case)
2012-02-23 16:43:17 +00:00
Franz Roters
989a2b2d39
added default entries for Lp_frac and analyticJaco
2012-02-23 10:53:15 +00:00
Pratheek Shanthraj
28d654d61e
forgot to remove some print statements in previous commit
2012-02-22 20:22:54 +00:00
Pratheek Shanthraj
b9a82156c9
crystallite.f90: can now calculate analytic jacobian by setting analyticJaco = 1 in numerics.config
...
math.f90: added math_mul3333xx3333…
numerics.f90: to read in analyticJaco and Lp_frac
2012-02-22 20:11:09 +00:00
Christoph Kords
9bf5b9dc86
dotState=NaN enforces cutback, if evolution rates lead to negative densities
2012-02-22 16:08:22 +00:00
Martin Diehl
21db79ce25
automated copyright information seems to be very complicated, not working yet
2012-02-22 14:06:28 +00:00
Martin Diehl
e25f605838
still trying to add copyright information by keyword via svn
2012-02-22 13:56:03 +00:00
Martin Diehl
20fdd302d7
trying to add copyright information by keyword via svn
2012-02-22 13:47:39 +00:00
Martin Diehl
ca401292e7
2012-02-22 13:46:33 +00:00
Martin Diehl
ca59c9936f
trying to add copyright information by keyword via svn
2012-02-22 13:43:35 +00:00
Martin Diehl
b0e2707a94
trying to add copyright information by keyword via svn
2012-02-22 13:40:03 +00:00
Martin Diehl
d68a3d1869
added LF=UNIX to a bunch of files
2012-02-22 13:30:00 +00:00
Martin Diehl
d8ffc29236
again: adding pInt, removing redundant use statments, chang in dble to real(,pReal)
2012-02-21 16:31:37 +00:00
Martin Diehl
9dc730dea4
now getting path separator by counting slashes and backslashes in $PATH environment variable
2012-02-21 16:04:16 +00:00
Martin Diehl
79663a7f76
polishing: adding pInt, removing unused use-statements etc
2012-02-21 16:00:00 +00:00
Martin Diehl
23cda48709
cleaning up, removing includes not needed
2012-02-21 15:42:47 +00:00
Martin Diehl
87a83d82b7
changed assumed arrays (:) to properly defined ones (gfortran 4.7 was complaining) and remove use statements that are not needed
2012-02-21 15:39:36 +00:00
Christoph Kords
8dc6e256c0
choose textures and phases of example materials according to what the labels suggest
2012-02-21 13:16:59 +00:00
Christoph Kords
97b2240fe9
take absolute dislocation velocities when testing Courant-Friedrichs-Lewy condition
2012-02-21 13:11:47 +00:00
Martin Diehl
6c0f9d163b
polishing: removed variable names like 'unit' and 'data' that are keywords of fortran and ensured that integer and real precision matches independent of machine standard.
...
removed cut_off parameter for damask_spectral
removed outpot of derived divergence measures and added RMS output in brackets
added comments and options to the makefile
2012-02-15 18:58:38 +00:00
Nan Jia
db06c797cd
store number of outputs for each instance of the constitution in constitutive_[j2/titanmod/...]_Nouput and use this value to loop over all valid outputs when determining the size of the outputs array
2012-02-14 15:19:59 +00:00
Martin Diehl
49a964aeda
removed public statement in derived data type causing trouble on older compilers
2012-02-14 13:56:35 +00:00
Martin Diehl
8f22d5a324
corrected geometry reconstruction (fluctuations were scaled wrong) and translated some comments from german to english
2012-02-14 13:43:36 +00:00
Martin Diehl
d9522bf588
minor changes, substituting implicit type conversions with explicit ones
2012-02-14 12:17:47 +00:00
Christoph Kords
30c55c3142
added check for unknown keywords again (in agreement with Philip ;-)
...
indeed 'constitution' and '/nonlocal/' are the only keywords which have to be ignored, since they are parsed elsewhere
2012-02-14 09:22:37 +00:00
Philip Eisenlohr
9b73cb3c65
removed parameter check complaining about unknown keyword as default case. there are just too many keywords that do not trigger a variable assignment to cope with them (e.g. /nonlocal/, constitution, etc.)
...
I suggest to kill similar logic from other files if present somewhere...
2012-02-13 23:30:59 +00:00
Christoph Kords
c786336af3
reordered (and partly redistributed) error message identifiers, deleted those which are not in use anymore.
...
all constitutive as well numerics now raises an error, if an unknown keyword is found in the respective config file
2012-02-13 17:41:27 +00:00
Martin Diehl
dd51e1da81
changed calculation of gamma_hat back to (working, but theoretically wrong) order
2012-02-13 17:15:02 +00:00
Krishna Komerla
94100e8d8e
missing line break
2012-02-13 15:21:03 +00:00
Martin Diehl
156ec4582a
polishing, adding _pInt etc. where applicable
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post_results now handels zero increment different (like FEM, it is always there even if it is not counted)
2012-02-13 14:18:07 +00:00
Martin Diehl
f03e7c459c
small polishing, exchanged stops in math.f90 with calls to IO_error
2012-02-13 14:08:07 +00:00
Martin Diehl
a6864bf599
added missing 'dotF'
2012-02-13 12:41:44 +00:00
Martin Diehl
df07299f78
fixed bug concerning calculation of gamma operator and improved output to screen
2012-02-13 12:38:46 +00:00
Philip Eisenlohr
fa32a00d56
changed symmetryID initialization to integer (instead of float) value
2012-02-10 17:46:43 +00:00
Philip Eisenlohr
b211c13487
added "dotF" synonym to load case parsing.
2012-02-10 17:45:45 +00:00
Martin Diehl
1cc2315954
restructured algorithm, initialization now not longer within increments, lot of small improvements/polishing
...
makefile now calls compiler with lot of warning flags
2012-02-10 11:59:59 +00:00
Martin Diehl
37ac7bf1b4
fixing inconsistencies in variable assignments
2012-02-10 11:56:05 +00:00
Martin Diehl
cff66b5cc3
removed implicit type castings
2012-02-10 11:24:53 +00:00
Christoph Kords
26b4f886ba
whoops, accidentally removed _pInt in the IO_error calls which where previously added by Martin
2012-02-10 07:58:33 +00:00
Christoph Kords
ff53b9754b
somewhat better readable format without as much linebreaks
2012-02-10 07:50:29 +00:00
Martin Diehl
7a23833a39
removed line>132 characters, added _pInt when calling IO_error
2012-02-09 17:28:55 +00:00
Martin Diehl
0e2894f2b1
corrected handling of highest frequencies, polished and checked for standard compliance
2012-02-09 15:58:15 +00:00
Martin Diehl
724ec040a2
added pInts and pReals
2012-02-09 15:55:04 +00:00
Philip Eisenlohr
dced3f9430
changed FFT reporting of dimension and resolution to one line each.
2012-02-09 13:18:59 +00:00
Martin Diehl
195491aaaa
added missing pInts
2012-02-09 12:35:55 +00:00
Martin Diehl
a26456f9c0
now handling capitals in restart argument correctly
2012-02-09 12:20:14 +00:00
Christoph Kords
e7d407c2f6
crystallite_Fp has to be initialized in crystallite_init, cause it is used by constitutive_microstructure
2012-02-03 14:52:09 +00:00
Christoph Kords
5ddade27fc
changed Peierls stress to more realistic values for fcc
2012-02-03 13:12:45 +00:00
Christoph Kords
d62eddc0cd
corrected kinetics law and changed parameters. For solid solution hardening there are 3 parameters: the activation energy, the concentration of obstacles that determines the activation length and meanfreepath, and the obstacle size that determines the activation volume. For the Peierls mechanism there is: the width of doublekinks that determines the activation volume and the Peierls stress for edge and screw.
...
Still testing needed to check whether the current formulation makes sense or not.
2012-02-03 12:50:54 +00:00
Christoph Kords
bbf4f25898
renamed subroutine "mesh_marc_get_mpieOptions" to "mesh_get_damaskOptions" which is now also used for abaqus and spectral input files. The only available option so far is "periodic", which allows for periodic fluxes in the specified direction. Examples for usage (add the following lines to the respective input file, in case of spectral file this goes into the header):
...
- periodicity in x and z direction for marc:
$damask periodic x z
- periodicity in y direction for abaqus:
**damask periodic y
- periodicity in x and y direction for spectral:
periodic y x
2012-02-03 12:37:52 +00:00
Krishna Komerla
7e23f84d2c
new subroutine find_nearest_neigbor, basically a wrapper function for our purpose to kdtree2
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split up kdtree2.f90 again from math.f90 to make the files better accessible
2012-02-02 15:57:22 +00:00
Martin Diehl
72aeb2113a
minor improvement on the still not working long (polarization field based) algorithm
2012-02-02 13:20:09 +00:00
Martin Diehl
faed4ec232
added deallocation of arrays (fftw_free)
2012-02-02 13:19:35 +00:00
Martin Diehl
2e4f2f3d9c
added _pInt where appropriate
2012-02-02 13:19:02 +00:00
Martin Diehl
683384681a
doing average correction now in Fourier space, now sure that the constant term is correct.
...
changed order of stress BC calculation/spectral method to avoid average calculation of stress in real space
2012-02-01 20:30:27 +00:00
Martin Diehl
c6fb2122be
added some comments for further debuggin/compliance with standard checking
2012-02-01 20:28:58 +00:00
Martin Diehl
c5128e94eb
some f2008 standard related correction i didn't check in last time
2012-02-01 20:20:05 +00:00
Martin Diehl
800e291240
made code standard conform to Fortran 2008 (ignoring warning concerning comments beyond character 132). Basically, changing "x" format specifier to "Nx" ("1x") plus removing $ format specifier
...
added compiler switches for gfortran and ifort to check for standard conformity
old gnu compilers <4.4 are not longer supported because they don't provide the c binding for fftw
2012-01-31 19:18:55 +00:00
Martin Diehl
80583fefb5
added compilation_info.f90, to store compilation date,time and compiler info in each file
...
added #include statement at each init() routine
2012-01-31 14:54:49 +00:00
Martin Diehl
8cf67e1be6
corrected weighting of difference divergence measures, added some additional output and introduced exit code 0 for successful termination.
2012-01-30 20:25:04 +00:00
Martin Diehl
9464937db7
merge declaration and initialization with standard values
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corrected handling of $DAMASK_NUM_THREADS
2012-01-30 20:16:19 +00:00
Martin Diehl
eeda357710
N^2 initialization loop (former spectralPictureMode) rewritten in material.f90
...
additional output in DAMASK_spectral_interface.f90
132 character cut off in constitutive_nonlocal.f90
rounding error in math.f90 complex number initialization (1.0_pReal)*2.0_pReal*pi
new $DAMASK_NUM_THREADS warning in numerics.f90 / IO.f90
polishing in DAMASK_spectral.f90
2012-01-30 13:52:41 +00:00
Christoph Kords
4edd824d8c
forgot homogenization.f90 in last commit
2012-01-26 13:51:01 +00:00
Christoph Kords
1330576a01
added new math function "math_deviatoric33" which returns the deviatoric part of a 3x3 tensor
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renamed some math functions, so that we have a universal naming scheme: for matrix multiplications use an "x" (e.g. math_mul33x3); don't use the "x" to describe the shape of the tensor that the function is applied to (e.g. math_invert33 instead of math_invert3x3)
2012-01-26 13:50:00 +00:00
Christoph Kords
df931890e0
corrected typos
2012-01-26 12:50:04 +00:00
Christoph Kords
6fec57bbd7
replaced variable fraction by "timefraction"
2012-01-26 12:48:59 +00:00
Christoph Kords
5a658d1b82
dislocation velocity output for each dislocation type (edge+,edge-,screw+,screw-)
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for fcc constitutive_nonlocal_kinetics is called only once and the result is used for each dislocation type, for all other lattice structures we have one call for each dislocation type
2012-01-26 07:43:36 +00:00
Christoph Kords
e5407894b5
Reworked kinetics. Now there is a universal law which can be used for both fcc and bcc (and probably even hcp). It mainly consists of an athermal forest cutting part , solid solution and peierls as thermally activated processes, and viscous glide. Therefore, lots of new parameters in the material.config. Not sure yet if the values make sense though.
...
Also renamed some of the old parameters.
Unknown constitutive output raises error.
2012-01-25 17:04:37 +00:00
Martin Diehl
e6495c986b
corrected order of arguments for calling functions from python, small polishing in math.f90 (substituting manual summation by sum() )
2012-01-25 14:31:21 +00:00
Martin Diehl
fa372523a8
added and restructured comments
...
debugGeneral = .true. now enables the additional output
restructured the debug options
started to implement the long algorithm (with fluctuation field), not working at the moment, can be enabled via simplified_algorithm <1 in numerics.config
corrected calculation of RMS of divergence, now measures in real and fourier space match
2012-01-25 14:27:26 +00:00
Martin Diehl
884249aba8
removed hint how to patch fftw, added flag for gfortran to check if maximum length of source files do not exceed 132 characters
2012-01-25 14:24:08 +00:00
Martin Diehl
bd48620de2
improved Curl_fft, corrected Divergence_fft and added math_skew3x3
2012-01-25 10:30:39 +00:00
Martin Diehl
e7ac99eeca
for spectral solver, --restart XX sets restartReadInc to XX-1, meaning restartReadInc is the step to read and XX the step at which the calculation begins
2012-01-25 09:05:38 +00:00
Martin Diehl
656d7a68d2
one new error message for spectral solver
2012-01-25 09:00:40 +00:00
Martin Diehl
3e521e32a6
indroduced 3 more flags for fine control of spectral algorithm
2012-01-25 08:56:46 +00:00
Martin Diehl
52a43c3b32
improved help output and corrected triggering (-h, --help) of help
2012-01-25 08:54:37 +00:00
Philip Eisenlohr
0cb90d4926
corrected debug_verbosity glitch (missed ">0" in logical expression)
2012-01-23 13:32:37 +00:00
Christoph Kords
4980f57fd5
added total Green-Lagrange strain to crystallite outputs
2012-01-20 10:25:35 +00:00
Philip Eisenlohr
43bd667f78
switched array indices of curl_fft in accordance with math.f90
2012-01-19 20:39:33 +00:00
Philip Eisenlohr
a13aeb045f
corrected curl_fft subroutine
2012-01-19 20:38:52 +00:00
Christoph Kords
1032ff3d47
corrected definition of element base node, which was still flawed
2012-01-19 14:15:26 +00:00
Christoph Kords
6c2a61e489
corrected node coordinates and sorting for spectral method
2012-01-17 16:53:56 +00:00
Christoph Kords
8739b9522e
dislocation stress does not add to stress field anymore, but is only available as constitutive output for purposes of postprocessing. instead, we now use a backstress term (which is added to the resolved shear stress) that depends on the gradient of excess density on the same slip system.
2012-01-17 10:26:57 +00:00
Philip Eisenlohr
ab7b9247c7
final merge with edits dropped intermediately from rev 1190.
2012-01-16 15:10:16 +00:00
Martin Diehl
3a22bf7e27
changed fftw from legacy fortran to new (2003) fortran (calling c routines directly)
...
renamed "steps" consequently to "incs"
moved kdtree2 to math.f90, put original source to private folder
2012-01-13 16:18:16 +00:00
Martin Diehl
c644b2c24d
corrected rectifyPath function (did not work in case of more than one /../..)
2012-01-13 15:22:42 +00:00
Martin Diehl
2259f44cb1
added parameter for debugging of FFTW in spectral method
2012-01-13 15:21:24 +00:00
Martin Diehl
07186e0751
added output of precision to init
2012-01-13 15:20:29 +00:00
Philip Eisenlohr
f3bb2271c9
parsing of spectral geom file now accepts two-dimensional microstructure definition (plus range indications by 'x to y')
...
For instance:
1 2 3 4
5 6 7 8
9 10 11 12
...
2012-01-12 17:01:24 +00:00
Pratheek Shanthraj
11c71aae86
bugfix release
2012-01-12 16:31:23 +00:00
Philip Eisenlohr
83ff05c8e8
fixed bugs (sorry...)
2012-01-12 15:08:44 +00:00
Pratheek Shanthraj
2ea3c68d3f
removed spectralPicturemode
2012-01-12 10:36:17 +00:00
Philip Eisenlohr
7103a44d45
renamed debug variables, plus additional "beautification".
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renamed "logscale" header info to "log scales" in accordance with plural versions of similar variables.
2012-01-12 10:23:05 +00:00
Philip Eisenlohr
a7d9d711f6
edited lines exceeding 132 chars (before any comment started)
2012-01-11 16:56:35 +00:00
Martin Diehl
c54600fd1f
added kdtree2 source and changed makefile to compile it.
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started to implement the nearest neighbor search for regridding
corrected calculation of divergence in real space.
corrected handling of maximum stress deviation (removed mask)
2012-01-04 17:43:26 +00:00
Martin Diehl
ee401520d7
corrected divergence calculation. Still some open questions, but improved understanding a lot
2011-12-23 12:30:35 +00:00
Martin Diehl
6dee2616f5
added help info how to use the executable
2011-12-23 12:29:04 +00:00
Martin Diehl
99fa0e0be8
corrected calculation of curl (last version was more a dummy function)
2011-12-23 12:23:13 +00:00
Philip Eisenlohr
e62d083f7a
removed (virtually) dead single-precision branch of the spectral solver.
2011-12-22 13:19:27 +00:00
Philip Eisenlohr
35bd460e39
added "core" package capability to processing
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(renamed former f2py modules)
reverted pathinfo...
2011-12-22 10:36:59 +00:00
Krishna Komerla
f463c2da70
added addCurl.py, not sure if it works correctly. still in old (eq. to addDivergence.py) style
2011-12-21 17:25:31 +00:00
Philip Eisenlohr
b0ba5f7ba3
code setup now takes BLAS in order of precedence from IKML, ACML, and LAPACK.
...
Leave pathinfo blank for BLAS-options that are not available (like IKML typically)
2011-12-20 10:58:51 +00:00
Franz Roters
c4a4c5cdca
corrected error in apply_DAMASK_modifications
...
added support for Marc/Mentat2011 (classic)
2011-12-19 16:06:03 +00:00
Philip Eisenlohr
739c524848
makefile substitution now based on regexp match.
...
condensed makefile syntax.
can now use a system-defined LAPACK instead of ACML (required for OS X...).
fixed bug that 'ULTRA' was not using -O3 for most of the compiling...
2011-12-16 09:11:03 +00:00
Philip Eisenlohr
a8dece8694
adopted use of general damask package ("import damask" instead of "damask_tools")
2011-12-15 08:52:41 +00:00
Christoph Kords
b2547e0117
Math inversion used to return zero (math_inv3x3) or error (math_invert3x3) for negative determinant. Now checking whether the absolute(!) value of the determinant is close to zero to avoid singularities, negative determinants are very well allowed.
2011-12-14 08:55:24 +00:00
Martin Diehl
031a00237f
improved makefile, no directly linking to files of acml
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corrected default pathinfo
improved test for intel compiler
2011-12-09 16:34:53 +00:00
Martin Diehl
7d1d2b6229
corrected small mistake in setup_code and makefile
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test no. 1500, spectral compile test with intel compiler is now working. adjusted run_test and tamask_test
2011-12-09 15:13:27 +00:00
Philip Eisenlohr
2ceb78c337
introduced new damask_tools method "relPath" and adopted it in setup_processing.py and setup_code.py
2011-12-06 18:38:03 +00:00
Martin Diehl
ea0fe7b406
corrected 3D visualize (math.f90 part was not working)
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small polishing of voronoi_tessellation.f90
2011-12-06 17:46:33 +00:00
Martin Diehl
5ebeb96e85
made DAMASK to work with gfortran:
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-removed to long lines
-restructured f2py modules and merged make_DAMASK2Python into setup processing
-setup_code.py now sets library path in makefile and asks for compile switches for spectral code
-substituted \ in format strings with $
restructured DAMASK_spectral:
-more logical output and structure of code
-better input for spectral debug parameters
2011-12-06 16:58:17 +00:00
Philip Eisenlohr
efadf9f728
mainly fixed error in output of spectral results (1:N,…) instead of (N,…)
...
rearranged some logic here and there.
(hopefully) improved readability of debug/standard output.
restarting logic would need some discussion with Martin/Krishna still…
2011-12-04 10:01:32 +00:00
Martin Diehl
ace6851389
moved all routines from postprocessingMath to math.90, renamed the module to DAMASK, changed scripts and interfaces accordingly.
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polished math.f90 (mainly added _pInt/_pReal and intent(in/out))
curl_fft is still a dummy function
2011-12-01 12:01:13 +00:00
Franz Roters
e738bee1e3
moved todolist to private tree
2011-11-28 08:18:07 +00:00
Franz Roters
515986c4d6
renamed w0 and w0_slip to a and a_slip
2011-11-23 14:48:39 +00:00
Philip Eisenlohr
f685bbba0e
exchanged location of "graincount" in user block.
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now matches wiki entry:
1. homogenization block
2. grain block
(grain count
sub-block[s] of crystallite and constitutive)
2011-11-23 09:09:00 +00:00
Martin Diehl
5a1e73b53d
added set_timelimit functionality to fortran-wrapper of FFTW and introcudec it to DAMASK_spectral.f90
2011-11-21 18:48:38 +00:00
Martin Diehl
566f16b6e9
implemented calculation of divergence in real space, polished spectral debugging
2011-11-21 18:12:40 +00:00
Martin Diehl
dc6c29a910
important bugfix for reading in results in case of restart
2011-11-17 22:11:05 +00:00
Martin Diehl
5ef73e164a
restructured algorithm: moved into loop to reallocate fields and replan FFTW in case resolution changes during runtime ==> regridding
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introduced parameters for selective debugging of spectral code and partly introduced the advanced divergence calculation again which is controlled by debug.config
added switch in numerics to control divergence behavior (uncorrected and corrected by phenomenological factor)
added precision directive to all values I found
2011-11-15 17:54:18 +00:00
Krishna Komerla
60c9293baf
restarting seems to work, spectral solver writes own defgrad to disk.
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step counting rectified
added additional output of deformation gradient volume min and max
2011-11-11 14:17:43 +00:00
Christoph Kords
860594d9a4
forgot to multiply shearrate with timestep in order to get accumulated shear
2011-11-09 10:26:00 +00:00
Christoph Kords
6dc8a4d530
check for LFC only if there is any slip activity at all; also increased safety factor from 1.2 to 1.5
2011-11-09 09:55:39 +00:00
Christoph Kords
7033e84fc7
new outputs "accumulatedshear", "velocity_edge", and "velocity_screw" (the latter two replace the output "dislocationvelocity")
2011-11-09 09:22:52 +00:00
Martin Diehl
de96e99bca
corrected determination of restartRead from commandline (now done by FEsolving instead of DAMASK_spectral_interface)
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recompiled fftw libraries with --enable-shared to make them work with f2py
added draft for compilation test of spectral solver
2011-11-07 18:25:10 +00:00
Christoph Kords
8bc39fcd48
immobile density output keeps its sign
2011-11-07 15:46:40 +00:00
Christoph Kords
34adec74e8
corrected wrong indices into state array for velocity
2011-11-07 15:17:58 +00:00
Krishna Komerla
49c0b8a3fd
restructured restarting capabilities
2011-11-07 11:04:57 +00:00
Christoph Kords
7dfb96a3da
constitutive_nonlocal:
...
dislocation velocities are stored in the state, so we actually now have three "parts" of the state, the basic states that are updated by "constitutive_dotState" come first, then the dependent states that are calculated by "constitutive_microstructure" follow, and finally we have a last part reserved for other variables that just use the memory reserved by the state array and are updated somewhere else.
constitutive:
LpAndItsTangent does not need the full state, but only the local state, so changed that at least for the nonlocal constitutive law
2011-11-04 13:12:17 +00:00
Christoph Kords
9d1bc584d0
corrected stress integration scheme: now use norm(Lpresiduum) as a target function for Armijo's rule instead of whole tensor Lp; also corrected the guess for the improvement in Lp
2011-11-04 12:57:12 +00:00
Christoph Kords
ca3d21a3b6
Depending on which state integrator one uses for the stiffness calculation, the initial state has to be chosen accordingly: e.g. for FPI choose last converged state, but for explicit RK choose converged state from start of increment (in case of explicit euler no state integration at all, but only stress integration). For this purpose we also need to remember "Fe" which now follows the cutbacking procedure as it is used for "Fp".
2011-11-04 12:44:50 +00:00
Martin Diehl
ee7022d8cf
correctet random seed generation to work with gfortran.
2011-11-04 10:29:35 +00:00
Martin Diehl
c2eac36b48
started to implement restart facilities for spectral solver.
...
restart write is on per default
restart read is switched on by using --restart or -r INT where INT gives step at which the calculation should restart
setting INT to a value <1 will turn restart write off
2011-11-03 19:32:11 +00:00
Philip Eisenlohr
b9647b2584
moved parts into new "lib" folder
2011-11-03 13:21:11 +00:00
Martin Diehl
680ba9082f
removed deadlock when calling IO_warning(33)
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polished IO_error and IO_warning
checked OpenMP critical statements in DAMASK_spectral.f90
corrected writing of headed in DAMASK_spectral.f90
2011-11-02 14:38:42 +00:00
Claudio Zambaldi
447e69019c
Introduced environment variable DAMASK_ROOT.
...
It is set in the DAMASK root folder by running damask_env.sh
Much needed in the testing routines so far (try ./testing/run_tests.py)
damask_env.sh could also trigger other scripts to get to a working setup after fresh checkout. For example it could run
./processing/setup/setup_processing.py
./code/setup/setup_code.py
if it finds that we have a fresh checkout.
2011-10-27 17:55:42 +00:00
Martin Diehl
15c356c3a7
some small improvements regarding the rotation of the loadcase frame
2011-10-25 13:38:24 +00:00
Martin Diehl
c13aa2a829
first try of implementing a rotation of the loadcase coordinate system. Seems to work so far for one loadcase and homogeneous materials.
2011-10-24 18:26:34 +00:00
Martin Diehl
0f34d14bee
again edited the makefile, no there is more flexibility in defining the libraries (FFTW and ACML)
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added the source of fftw-3.3.tar.gz to fulfill the GPL
set_python_env.py was forgotten during last commit (for testing)
2011-10-24 16:57:51 +00:00
Martin Diehl
8ac1891b3c
moved DAMASK_NaN to prec.f90 respectively prec_single.f90 as it is precision dependent
2011-10-20 16:46:11 +00:00
Martin Diehl
ac342ad682
worked on the updating on increments, does not work properly until now
2011-10-19 09:05:02 +00:00
Krishna Komerla
0a46741a77
changing header to correct number of increments
2011-10-18 16:42:06 +00:00
Martin Diehl
9d3f74ce5f
polishing
2011-10-18 14:46:07 +00:00
Martin Diehl
7746390688
using keywords to indicate geometry and loadcase
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enabled finetuning of FFTW
added some debugging options
reading in rotation of boundary conditions
using header in geometry file
corrected error in calculating tolerance for stress BC
polishing of output, variable declaration, and variable names
2011-10-18 14:45:32 +00:00
Martin Diehl
9a6977b024
changed commandline parameters into a keyword driven form
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use "-l, --load, --loadcase" to specify loadcase file and
"-g, --geom, --geometry" to specify geometry file
!incremental update, wait for commit of damask_spectral.f90 before checking out
2011-10-18 09:25:17 +00:00
Martin Diehl
ea2ba1573c
polishing
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!incremental update, wait for commit of damask_spectral.f90 before checking out
2011-10-18 09:22:33 +00:00
Martin Diehl
7604a8aeb4
corrected calculation of NaN, renamed variable to 'DAMASK_NaN'
...
!incremental update, wait for commit of damask_spectral.f90 before checking out
2011-10-18 09:21:38 +00:00
Martin Diehl
6cf464b8a9
added 'spectralPictureMode' for reading in geometries with 1to1 mapping (e.g. EBSD pattern)
...
polishing
!incremental update, wait for commit of damask_spectral.f90 before checking out
2011-10-18 09:20:29 +00:00
Martin Diehl
6ed27a2a13
added 'spectralPictureMode' for reading in geometries with 1to1 mapping (e.g. EBSD pattern)
...
!incremental update, wait for commit of damask_spectral.f90 before checking out
2011-10-18 09:18:05 +00:00
Martin Diehl
a8a53ee525
added two parameters to control behavior of FFTW, timelimit is not working at the moment
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remove fftw3.f as it is not needed anymore
!incremental update, wait for commit of damask_spectral.f90 before checking out
2011-10-18 09:16:18 +00:00
Martin Diehl
4989535500
new version 3.3 of FFTW. Compiled with gfortran but only for multicore support (single core library is still the old version 3.2.2). Now either POSIX threads or OMP can be used by choosing the corresponding library file
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Some further polishing (besides of new description for FFTW) of the makefile
2011-10-13 12:41:01 +00:00
Franz Roters
8edb59d50c
removed some unused variables
2011-09-26 09:55:38 +00:00
Franz Roters
58917b5abe
corrected error messages
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you can now switch of shear banding by seting sb_velocity to zero
stacking fault energy parameters are now read from material.config
2011-09-26 09:55:08 +00:00
Franz Roters
2e263dee90
merged in the shear band code, it compiles but is not otherwise tested yet
2011-09-16 15:55:18 +00:00
Franz Roters
9d091bdc3f
added parameters for shear band model
2011-09-14 13:35:28 +00:00
Franz Roters
ee83904548
added math_spectralDecompositionSym3x3 used by shear band model
2011-09-14 13:26:00 +00:00
Martin Diehl
483b483816
dummy update because those messages got lost:
...
Date: Tue, 13 Sep 2011 17:46:44 +0200
From: m.diehl@mpie.de
To: wangleyu@msu.edu , lebenso@lanl.gov , denny.tjahjanto@imdea.org ,
o.guevenc@mpie.de , n.jia@mpie.de , m.diehl@mpie.de , c.kords@mpie.de ,
c.zambaldi@mpie.de , p.eisenlohr@mpie.de , f.roters@mpie.de
Subject: update: /home/svn/repos/DAMASK to 1000
Message-ID: <4e6f7ae4.Xjnd/szYAh8QCXTo%m.diehl@mpie.de>
User-Agent: Heirloom mailx 12.2 01/07/07
MIME-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit
A processing/pre/FromEBSD/
A processing/pre/FromEBSD/Hex2Cub.cpp
A processing/pre/FromEBSD/SpectralMethodFromEBDS
A processing/pre/FromEBSD/patchFromReconstructedBoundaries
D processing/pre/patchFromReconstructedBoundaries
added two small (quick and dirty) tools to convert data from EBSD to input files for spectral method, put them together with patchFromReconstructedBoundaries into new folder.
Date: Tue, 13 Sep 2011 17:54:06 +0200
From: m.diehl@mpie.de
To: wangleyu@msu.edu , lebenso@lanl.gov , denny.tjahjanto@imdea.org ,
o.guevenc@mpie.de , n.jia@mpie.de , m.diehl@mpie.de , c.kords@mpie.de ,
c.zambaldi@mpie.de , p.eisenlohr@mpie.de , f.roters@mpie.de
Subject: update: /home/svn/repos/DAMASK to 1001
Message-ID: <4e6f7c9e.v9E4JVN2a6bg5tL8%m.diehl@mpie.de>
User-Agent: Heirloom mailx 12.2 01/07/07
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U code/DAMASK_spectral.f90
U code/DAMASK_spectral_interface.f90
U code/IO.f90
U code/crystallite.f90
U code/homogenization_RGC.f90
U code/lattice.f90
U code/makefile
U code/material.f90
U code/mesh.f90
did a lot of polishing:
- removed unnecessary "return" before end of subroutine or function:
- changed undetermined array length (:) to (1:3)
To prevent problems with some code analysing tools:
- "3D oneliner loops" (with ";) only for "do" and "enddo" at the same time
- removed line continuation in OMP statements
made the makefile more flexible, removed heap-arrays switch
Date: Tue, 13 Sep 2011 17:57:07 +0200
From: m.diehl@mpie.de
To: wangleyu@msu.edu , lebenso@lanl.gov , denny.tjahjanto@imdea.org ,
o.guevenc@mpie.de , n.jia@mpie.de , m.diehl@mpie.de , c.kords@mpie.de ,
c.zambaldi@mpie.de , p.eisenlohr@mpie.de , f.roters@mpie.de
Subject: update: /home/svn/repos/DAMASK to 1002
Message-ID: <4e6f7d53.IEDDzo+JSzDWNSBr%m.diehl@mpie.de>
User-Agent: Heirloom mailx 12.2 01/07/07
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A documentation/Compiling/
A documentation/Compiling/Stack+usage.pdf
A documentation/ParallelizationAndTuning/
A documentation/ParallelizationAndTuning/BSC_tools_Overview.pdf
A documentation/ParallelizationAndTuning/Intro_Perf.pdf
A documentation/ParallelizationAndTuning/Kcachegrind.pdf
A documentation/ParallelizationAndTuning/LRZ210703_1.pdf
A documentation/ParallelizationAndTuning/LRZ210703_2.pdf
A documentation/ParallelizationAndTuning/MUST_Overview.pdf
A documentation/ParallelizationAndTuning/NPB-MZ-MPI-BT_Exercise.pdf
A documentation/ParallelizationAndTuning/PAPI.pdf
A documentation/ParallelizationAndTuning/PSC_Exercise_BT-MPI.pdf
A documentation/ParallelizationAndTuning/Paraver_Exercise.pdf
A documentation/ParallelizationAndTuning/Periscope_Overview.pdf
A documentation/ParallelizationAndTuning/SIONlib.pdf
A documentation/ParallelizationAndTuning/Scalasca_Examples.pdf
A documentation/ParallelizationAndTuning/Scalasca_Exercise_BTMZ.pdf
A documentation/ParallelizationAndTuning/Scalasca_Overview.pdf
A documentation/ParallelizationAndTuning/Scalasca_Patterns.pdf
A documentation/ParallelizationAndTuning/TAU.pdf
A documentation/ParallelizationAndTuning/VIHPS-TW8.pdf
A documentation/ParallelizationAndTuning/Vampir_Exercise.pdf
A documentation/ParallelizationAndTuning/Vampir_Overview.pdf
A documentation/ParallelizationAndTuning/instructions_periscope.pdf
A documentation/ParallelizationAndTuning/manualf06.pdf
added some information from Tuning workshop in Aachen regarding tuning/parallelization
added slides with information how to prevent segmentation fauld
2011-09-14 08:16:42 +00:00
Philip Eisenlohr
c7c541f393
corrected typos and such
2011-09-13 15:57:58 +00:00
Martin Diehl
c35ea33f8e
did a lot of polishing:
...
- removed unnecessary "return" before end of subroutine or function:
- changed undetermined array length (:) to (1:3)
To prevent problems with some code analysing tools:
- "3D oneliner loops" (with ";) only for "do" and "enddo" at the same time
- removed line continuation in OMP statements
made the makefile more flexible, removed heap-arrays switch
2011-09-13 15:54:06 +00:00
Franz Roters
cbbc3e84fe
solved argument mismatch
2011-09-13 14:15:17 +00:00
Franz Roters
1dd2591982
corrected wrong check of twin systems
2011-09-13 08:18:43 +00:00
Christoph Kords
7be2701989
* new output variable "internalstress", which gives the internal stress tensor
...
* use "math_invert3x3" instead of "math_inv3x3" for inversion of Fe
* for dislocation stress calculation: first regular case, then special case of dead dislocations in central ip
* "dv_dtau" now given for each dislocation type, so is a (ns,4) array
* deleted unused variables in "_LpAndItsTangent"
* corrected contribution of deads in "_LpAndItsTangent"
* the NaN variables defined in math did not give a proper NaN value, so use 0.0/0.0 again
* neighbors with nonlocal constitution but local properties (i.e. /nonlocal/ flag not set) are also considered for incoming fluxes
2011-09-07 11:30:28 +00:00
Martin Diehl
e8628996ff
added IO error in case mixed BC that allow rotation are given
2011-09-02 13:50:05 +00:00
Martin Diehl
fe9754a41c
previous commit was wrong file
2011-09-02 10:46:37 +00:00
Martin Diehl
43e2684cfb
added new glide system for hex lattice
2011-09-02 10:43:49 +00:00
Martin Diehl
0469d37fc3
cleaned and restructured output on screen, changed L_inf norm to L_2 for calculation of error in Fourier space.
...
removed unnecessary function from math.f90
added some documents/manuals regarding spectral method
2011-08-31 14:37:01 +00:00
Martin Diehl
f527bdcc78
changed standard values according to numerics.f90
2011-08-30 11:21:39 +00:00
Martin Diehl
8f90f1f1f9
corrected description of algorithm to invert matrix
2011-08-30 07:29:13 +00:00
Martin Diehl
4fb1cb8f87
merged calcmodes, i.e. equilibrium and fulfilling of stress BC is done in one step,
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made convergence independent of size and resolution,
polishing output in DAMASK_spectral.f90
added function to compute eigenvalues without eigenvectors and function to convert a 3x3 logical to a 9 vector in math.f90
removed obsolete variable in numerics.f90
2011-08-26 14:06:37 +00:00
Martin Diehl
380a536b45
homogenization_*, constitutive_*, DAMASK_spectral_interface: did some polishing regarding init output
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makefile: corrected spelling mistake
2011-08-26 13:57:29 +00:00
Christoph Kords
b300cc7faa
ip volume is now based on the determinant of F. "mesh_ipVolume" represents the initial volume and is multiplied with det(F) wherever the current volume is needed. Since this works for all solver types, the "volume" output in crystallite is now also correct for spectral method and abaqus.
2011-08-19 11:18:56 +00:00
Martin Diehl
f99bf63397
removed functions added for debugging of divergence calculation to math.f90
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corrected calculation of stress BC condition. Depending on given BC, the stiffness matrix is reduced and than inversed. Then it is filled with zeros and used for the calculation of the correct change of deformation gradient. All calculation is done using dP/dF
2011-08-10 17:45:37 +00:00
Christoph Kords
1ffb59a96a
Calculation of current ip volumes now working. Crystallite output also reflects current grain volume, not reference volume. However, this is only available for Marc. Abaqus and spectral method still return the reference ip volume. The ip coordinates though are correctly updated for all solver types.
2011-08-10 16:37:17 +00:00
Martin Diehl
34de2e301b
DEBUGGING VERSION for calculation of Divergence (various methods implemented). DO NOT USE. Wait for next update coming in a few minutes
2011-08-10 16:02:13 +00:00
Martin Diehl
bb1ca2330b
added option to enable use of AMD math core library, added comments on the various parameters
2011-08-10 16:00:02 +00:00
Onur Guevenc
31b60b8814
changed debug intensity so that the artificially high stress and stiffness values in collection cycles do not get printed out anymore...
2011-08-03 17:59:31 +00:00
Onur Guevenc
4f1cb3a8af
exchanged forall with nested do loops... Bye, bye smatrix warning, will miss you!!
2011-08-03 17:58:16 +00:00
Onur Guevenc
907965272b
added option to build DAMASK_spectral without openMP (make OPENMP=OFF)
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fixed bug in bc_temperature assignment that was hitting memory.
Temperature is taken from the first loadcase and evolves from there in an adiabatic fashion for the moment. I.e. T-specifications from later loadcases are ignored...
2011-08-03 17:57:28 +00:00
Martin Diehl
b5abd6f203
adding new option OPTIMIZATION with values OFF, DEFENSIVE and AGGRESSIVE to makefile. Polishing of makefile and DAMASK_spectral.f90
2011-08-03 07:54:32 +00:00
Onur Guevenc
64435b8a97
loadcase takes 'temperature' (or 'temp') as input. Previously it was hard-wired.
2011-08-02 13:58:28 +00:00
Christoph Kords
422d6d9c6c
slight correction of debugging output
2011-08-02 12:36:08 +00:00
Christoph Kords
ef7405fe21
Stress integration now uses Armijo rule to find an appropriate correction of Lp: decreases step in case that residuum does not improve significantly, accelerates as usual in case of good convergence. This turned out to improve convergence behavior.
2011-08-02 11:29:08 +00:00
Christoph Kords
6f859e99de
* internal stress calculation now considers dead dislocations always at the interface, not at the center of the IP volume; used to merge them together with "normal" dislocations for stress calculation.
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* dislocation flux is blocked if we encounter a sign change in the resolved shear stress from the central ip to the neighbor
* do not set density to zero if below certain threshold; this creates an artificial sink term
2011-08-02 11:17:45 +00:00
Christoph Kords
0373fa64e4
have to initialize constitutive_state during constitutive_init, since the first call to constitutive_microstructure (where we already need the state) is done before the cutback scheme starts.
2011-08-02 11:10:41 +00:00
Martin Diehl
75c67f53f7
introduced alternative location for material configuration.
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If present, the >>>JOB.materialConfig<<< file takes precedence over the standard >>>material.config<<<
2011-08-02 10:14:16 +00:00
Martin Diehl
564eb5009f
shape mismatch in crystallite, invalid names for variables(pos, size) in homogenization corrected. polishing of DAMASK_spectral_interface and makefile
2011-08-01 18:10:55 +00:00
Martin Diehl
3adb7ab382
corrected makefile, now working again without giving standard values explicitly.
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did some small modification in order to make it possible to compile with gfortran. Changed NaN=0.0/0.0 to bitwise representation (3 different ways)
2011-08-01 10:11:32 +00:00
Philip Eisenlohr
06a4ac2565
fixed bug (segmentation fault) occurring for non-renumbered meshes: ipNeighborhood building did use FE IDs of twin nodes to address memory -- dangerous..!
2011-07-31 15:42:59 +00:00
Christoph Kords
fb121b1435
* boundary condition masking changed
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* damper initialized with one
* inversion of Mandelized stiffness tensor does not work, have to use plain tensor
* new functions in math that allow for conversion between Mandel and Plain tensors
2011-07-29 15:57:39 +00:00
Franz Roters
aa714a3d84
some textconstants were wider than specified in the format string, this might have caused Abaqus to crash due to an illegal memory reference (signal 11)
2011-07-29 14:54:26 +00:00
Martin Diehl
72d20875de
added some switches and variables to the makefile to make it more flexible
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DAMASK_spectral.f90 is a "debug version" with a number of different criteria to determine divergence. will be removed later on.
2011-07-25 16:30:21 +00:00
Philip Eisenlohr
2e9c605571
somehow forgot to move the numerics.config into the config subdir...
2011-07-21 08:40:45 +00:00
Franz Roters
e92e5cae53
restarting now works with Abaqus (standard, cannot test explicit due to lack of license)
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you have to specify the job you are restarting from in the job description (cae), if you prepare your input file by hand this is the first line after *Heading
example: if the first job was using Oldjob.inp the first entry in the job description needs to be Oldjob (without the .inp)
as for Marc restart works only from last converged increment, i.e. ther restart writing should be specified like this:
*retsart, write, frequency=1, overlay
Overlay is not essential but saves a lot of disk space and as stated before you can only restart from the last converged increment anyway
2011-07-18 09:15:20 +00:00
Philip Eisenlohr
8c65cb9ea6
small output polishing
2011-07-15 12:25:38 +00:00
Martin Diehl
09ba92c26e
added and rearranged error messages, polished output and simplified calculation of f depending on fdot or L
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guessing along former trajectory is now on per default, 'guessreset' and 'dropguessing' switch it off.
2011-07-14 09:37:31 +00:00
Martin Diehl
56340fd487
changed input of loadcase. Now fdot (time derivative) can be used instead of velocity gradient. Velocity gradient needs to have each line fully or not at all defined, as for other loadcases the stress BCs are not known in advance. Also added the possibility to keep guessing along trajectory of former loadcase.
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changed back to use the compliance of initial linear material behavior.
added counter of non-converged steps
renamed compiler flags in makefile
2011-07-13 16:33:12 +00:00
Martin Diehl
8153cd50b4
added spectral numeric parameters to numerics.config, changed values for spectral numeric parameters in numerics.f90 to more suitable values for new method for determination of divergence in Fourier space
2011-07-11 14:28:56 +00:00
Martin Diehl
a08eaecf4e
polishing (names of variables, spaces, comments etc.)
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renamed mpie to DAMASK in IO.f90 error message
2011-07-07 15:27:35 +00:00
Martin Diehl
a561ef1cf5
corrected calculation of divergence in Fourier space, removed normalization of normdyad (was useless), now using correct compliance for calculation of stress BC.
2011-07-07 10:03:55 +00:00
Franz Roters
18a5841bc5
keyword freq for frequency of output writing was not evaluated when reading loadcase file
2011-07-07 09:18:05 +00:00
Onur Guevenc
e889b69bec
Ability to define loglinear time increments by using 'logincs' or 'logsteps' instead of 'incs' in loadcase file is added.
2011-07-06 13:10:18 +00:00
Philip Eisenlohr
314adae1bb
spectral solver can now write result at reduced output frequencies: use 'f', 'freq', or 'frequency' keyword in loadcase definition.
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example: ... time 1 incs 100 freq 10 will write output at times 0.0, 0.1, 0.2, ... , i.e., every ten increments only.
2011-06-15 17:48:14 +00:00
Philip Eisenlohr
3985a98da7
changed default to "no clean". if clean-up required, use '--clean' option!
2011-06-15 16:40:34 +00:00
Philip Eisenlohr
480021e788
added '--noclean' option
2011-06-14 14:56:10 +00:00
Philip Eisenlohr
1877026d86
sorry, dangling "endif"...
2011-06-14 14:35:55 +00:00
Philip Eisenlohr
cc925cadee
changed output/debug-level relation for two statements
2011-06-14 14:08:13 +00:00
Philip Eisenlohr
a26d9c844b
max size of crystallite result is now based on actual use within the mesh, not just picking the largest chunk from the material.config file...
2011-06-08 09:16:48 +00:00
Philip Eisenlohr
8041587a72
changed internal debug verbosity in accord with debug.config listing.
2011-06-06 15:27:35 +00:00
Philip Eisenlohr
4a694fa7fd
changed wildcard letter from '#' to '*' now consistent with new IO comment parsing.
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fixed memory bug with bc_maskvector.
some brushing up here and there...
2011-06-06 15:20:28 +00:00
Christoph Kords
ae4c8fa2d8
renaming of "mpieNumThreadsInt" to "DAMAKS_NumThreadsInt" was forgotten here
2011-06-06 08:51:07 +00:00
Christoph Kords
9a64f3dd85
* comments are now recognized by IO even when they do not appear at the beginning of the line
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* no need for the zero entries in the material.config anymore
2011-05-30 09:09:19 +00:00
Christoph Kords
bbf75f3fb5
cannot omit entries for second to fourth slip system family, though they are zero
2011-05-30 07:53:41 +00:00
Franz Roters
08d39342e4
reworked restarting for compatibility with abaqus (not yet fully working)
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added new orientation feature for direct simulation:
component type (random) asigns random orientation to an entire grain
2011-05-28 09:44:43 +00:00
Franz Roters
2418dfe96d
changed MPIE_NUM_THREADS to DAMASK_NUM_THREADS
2011-05-28 09:42:25 +00:00
Christoph Kords
e39445ee7a
dead dislocations now exert a backstress on their "home" MP
2011-05-26 09:35:42 +00:00
Christoph Kords
78f74e8991
forgot to use "mesh_ipCenterOfGravity"
2011-05-26 09:23:13 +00:00
Christoph Kords
cac45cff96
ip coordinates are now updated every cycle; this is needed for the nonlocal internal stress fields
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* Marc: node displacements are added to initial node coordinates (mesh_node0) to get current node positions (mesh_node), then ip coordinates are deduced
* Abaqus: ip coordinates are directly updated, no update of node coordinates!
* Spectral: for the moment no update of either ip or node coordinates! passing only dummy values with initial ip coordinates
2011-05-24 15:57:59 +00:00
Christoph Kords
a910c469df
update of nonlocal material parameters
2011-05-20 08:11:22 +00:00
Philip Eisenlohr
808a6d6ad6
+ error box + now tells error number (useful for Abaqus)
2011-05-13 16:55:13 +00:00
Philip Eisenlohr
1baae024cb
added two more <crystallite> examples
2011-05-13 16:54:08 +00:00
Philip Eisenlohr
d366a53f4e
probably installation is a better place for the abq.env file
2011-05-11 17:10:45 +00:00
Philip Eisenlohr
fa98133f8e
renamed interface from "mpie_interface" to "DAMASK_interface"
2011-05-11 17:01:03 +00:00
Philip Eisenlohr
75192789e8
added making of DAMASK_spectral.exe
2011-05-11 16:45:37 +00:00
Philip Eisenlohr
43cc68555b
observe new include subdirectory
2011-05-11 16:40:51 +00:00
Philip Eisenlohr
e5a2d829b0
new substructure with 'include' and 'config' directories
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renaming of mpie_... to DAMASK for main usersubroutines
extension of element outputs from 5 to 8 digits (FFT!!!)
2011-05-11 16:38:45 +00:00
Christoph Kords
a0bec65c7b
Last version didn't compile, because of missing keyword "call" in front of subroutine call to IO_error
2011-05-09 08:49:03 +00:00
Philip Eisenlohr
660c9212f8
introduced error 667 for out of bounds user result requesting
2011-05-04 16:02:18 +00:00
Philip Eisenlohr
affd383ef8
simplified disorientation calculation. performed FEM check that "grainrotation" reflects the *active* rotation from the starting orientation to the current one with respect to the lab coord system (as expected).
2011-04-14 19:09:44 +00:00
Christoph Kords
5814262f55
moved some write statements within stateIntegrationEuler
2011-04-14 09:35:56 +00:00
Philip Eisenlohr
349f022100
reinstantiated calculation of grainrotation (still needs check for correctness, i.e. active or passive rotation output)
2011-04-13 16:08:52 +00:00
Franz Roters
7d84a0911e
removed unused variables
2011-04-13 14:16:22 +00:00
Christoph Kords
b4678112cd
sorry, last version did not compile. now with correct encoding.
2011-04-13 11:51:46 +00:00
Christoph Kords
dd2057bac5
changed header to unicode utf-8 encoding
2011-04-13 11:24:36 +00:00
Philip Eisenlohr
ef4fc9d0ee
added <crystallite> output "texture" to list of examples
2011-04-12 15:33:29 +00:00
Franz Roters
c1b8391110
changed enconding of all source files to UTF-8 without BOM (signature) Codepage 65001
2011-04-07 07:20:28 +00:00
Christoph Kords
4d0fefd231
security factor of 1.2 for CFL condition in constitutive_nonlocal_dotState
2011-04-06 11:47:24 +00:00
Philip Eisenlohr
51763ed93e
corrected number of incs reported in spectralOut-file
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inc 0 contains undeformed results
plus lots of typographic polishing
2011-04-06 09:58:17 +00:00
Franz Roters
7c7c929455
added comments on origin of files
2011-04-06 09:40:39 +00:00
Christoph Kords
4ea1fe436b
added check for CFL condition in constitutive_nonlocal_dotState
2011-04-06 09:07:36 +00:00
Philip Eisenlohr
e00d073ee3
added new 2D triangle elements
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added some sourcecode commenting on internal database formats
corrected database to allow for ipVol and Area calc in 2D element cases
2011-04-06 08:35:37 +00:00
Franz Roters
fcdb805225
added copyright text to all f90 (free) format files
2011-04-04 14:09:54 +00:00
Christoph Kords
6ca8942f62
choose correct output format for debug_verbosity: integer instead of logical
2011-04-04 08:38:55 +00:00
Christoph Kords
790dbed1e4
* removed last remnants of old debugger
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* replaced "dble" intrinsic function by "real" with pReal kind in constitutive_nonlocal.f90
* removed useless line breaks in output of state in CPFEM.f90
2011-04-04 08:34:52 +00:00
Alankar Alankar
06fc83ac14
Final version of titanmod
2011-03-31 09:21:43 +00:00
Franz Roters
fc471d73f3
added Arun to list of authors
2011-03-30 14:39:28 +00:00
Christoph Kords
c36968fc68
distance for periodic images in internal stress calculation was incorrect
2011-03-30 11:57:41 +00:00
Franz Roters
08da2b5e4d
added minimum abaqus_v6.env file containing all changes necessary for the use of the MPIE subroutine
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changed comments in interface routines to refelect this
2011-03-29 13:49:50 +00:00
Franz Roters
e9e6abbdaf
introduced variables for compiler options
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added -fpp switch to invoke precompiler
2011-03-29 07:55:38 +00:00
Christoph Kords
314ca3fe7f
Internal stress calculation in nonlocal model: instead of integration of excess gradients (->Bayley) we now sum up contributions from adjacent superdislocations within a certain radius R. When periodicity is used, also periodic images are considered in stress evaluation.
2011-03-29 07:34:33 +00:00
Christoph Kords
3d51dd36fa
* Introduced preprocessor directives in order to suppress compilation of most write statements when using openmp. This tremendously improves efficiency of parallelization.
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* Also added some more openmp directives to increase percentage of parallelized code.
* "implicit none" was missing in two subroutines of homogenization and constitutive.
2011-03-29 07:27:19 +00:00
Philip Eisenlohr
5c05c5d068
corrected mixed up array size for hardeningMatrices (twin/slip)
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added explicit array range 1:lattice_maxNslip/twinFamily
2011-03-24 17:20:35 +00:00
Franz Roters
fa323f3f0b
removed division by zero from debug_reset(), uses huge() now
2011-03-24 07:38:56 +00:00
Franz Roters
78d4e7d1dc
mpie_cpfem_abaqus_std.f: first call is with kinc==1
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mesh: allow multiple element sets with identical material
2011-03-23 16:20:12 +00:00
Franz Roters
8467c91dab
moved setup scripts back to subdirs where they are needed
2011-03-22 15:42:53 +00:00
Christoph Kords
31a570768b
new error 237: singularity in internal stress calculation
2011-03-22 13:58:42 +00:00
Nan Jia
7be2edb10e
added "texture
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" as possible crystallite output => reports ID for later discrimination...
2011-03-22 13:40:27 +00:00
Christoph Kords
b8b75edd7d
no changes to previous version, just wanted to add some comment to the previous commit:
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subroutine "constitutive_nonlocal_dotState" only affects the current dotState, so no need to pass the whole array as argument
2011-03-21 15:23:36 +00:00
Christoph Kords
9b1e1e35ea
dotState
2011-03-21 15:18:09 +00:00
Christoph Kords
462eda6736
split parallel region in integrateStateFPI into two
2011-03-21 14:30:10 +00:00
Christoph Kords
5ee73dee72
age dotState before resetting it to zero, otherwise the statedamping does not work.
2011-03-21 13:06:11 +00:00
Christoph Kords
fc6f2ae68f
No need to call constitutive_microstructure at the beginning of each crystallite step, since it's already been done at the end of the previous step. Just do it once after initialization to start with correct values for the dependent state variables.
2011-03-21 10:35:42 +00:00
Christoph Kords
11138e3ee2
debugging output is now controlled by the "verbosity" parameter in the debug.config ranging from 0 (=almost no output) to 8 (=very detailed output)
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0 : only version infos and all from "hypela2"/"umat"
1 : basic outputs from "CPFEM.f90", basic output from initialization routines, debug_info
2 : extensive outputs from "CPFEM.f90", extensive output from initialization routines
3 : basic outputs from "homogenization.f90"
4 : extensive outputs from "homogenization.f90"
5 : basic outputs from "crystallite.f90"
6 : extensive outputs from "crystallite.f90"
7 : basic outputs from the constitutive files
8 : extensive outputs from the constitutive files
If verbosity is equal to zero, all counters in debug are not set during calculation (e.g. debug_StressLoopDistribution or debug_cumDotStateTicks). This might speed up parallel calculation, because all these need critical statements which extremely slow down parallel computation.
2011-03-21 10:31:17 +00:00
Christoph Kords
9d7ede7e03
extreme values of stress and jacobian now recorded in CPFEM_general. variable declaration and generation of output moved to debug module.
2011-03-17 13:13:13 +00:00
Christoph Kords
235266b169
openmp parallelization working again (at least for j2 and nonlocal constitutive model).
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In order to keep it like that, please follow these simple rules:
DON'T use implicit array subscripts:
example: real, dimension(3,3) :: A,B
A(:,2) = B(:,1) <--- DON'T USE
A(1:3,2) = B(1:3,1) <--- BETTER USE
In many cases the use of explicit array subscripts is inevitable for parallelization. Additionally, it is an easy means to prevent memory leaks.
Enclose all write statements with the following:
!$OMP CRITICAL (write2out)
<your write statement>
!$OMP END CRITICAL (write2out)
Whenever you change something in the code and are not sure if it affects parallelization and leads to nonconforming behavior, please ask me and/or Franz to check this.
2011-03-17 10:46:17 +00:00
Franz Roters
97a0146672
deactivated one debug statement at the end of crystallite_updateState(g,i,e) as it leads to division by zero if constitutive_state(g,i,e)%p(1:mySize) contains zero values
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statement should be changed to check for zero values
2011-03-11 10:05:30 +00:00
Philip Eisenlohr
1f0569230b
new installation/setup dir to hold all top-level make_*-scripts
2011-03-11 09:20:37 +00:00
Franz Roters
bdc17f7d72
extended comment on modification of abaqus_v6.env
2011-03-11 09:05:09 +00:00
Franz Roters
6475235fb4
included "-heap-arrays 500000000" in remark on how to change compile command
2011-03-08 08:18:04 +00:00
Franz Roters
18e668340f
Abaqus interfaces dapted to newest version of the rest of the code
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does not yet check for restart, have to check out first how restarts work in Abaqus
explicit code not checked as we do not have a license
2011-03-07 12:49:27 +00:00
Franz Roters
654b5ea987
set type for acos_arg
2011-03-04 14:57:22 +00:00
Franz Roters
2975c99144
now the maybe not perfect quartenions caused trouble in math_QuaternionToEuler
2011-03-03 14:23:39 +00:00
Franz Roters
e7c7ccdcdd
improper rotation matrix from pdecomposition could cause negative arguments in squareroot
2011-03-03 10:47:07 +00:00
Franz Roters
6667e94238
abaqus routines VGETOUTDIR and GETOUTDIR do not return the trailing slash, which we assume to be there, so it has to be appended
2011-03-03 10:29:59 +00:00
Martin Diehl
138e9c43eb
some comments (talking to Ricardo)
2011-02-25 16:24:23 +00:00
Martin Diehl
a6d1e5c911
now deleted old _single files
2011-02-25 12:49:18 +00:00
Martin Diehl
8cae4d609a
some polishing for single precision version.
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Now only prec and mpie_spectral are needed in different versions
2011-02-25 12:41:46 +00:00
Christoph Kords
ad4706673b
* removed calculations for dipole formation/dissociation by stress change, since it is not used anyways; also removed associated constitutive outputs from material.config
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* removed input variables in constitutive_collectDotState and constitutive_postResults that are not needed anymore (because of recent changes in constitutive_nonlocal)
2011-02-25 09:53:20 +00:00
Martin Diehl
cd5407b08b
removed all math functions only for double precision by the more flexible counterpart, e.g. "dsqrt --> sqrt", "dsin --> sin". Should not cause any harm, as long as "implicit none" is used.
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Now it is possible to compile a single precision spectral solver/crystal plasticity by replacing mesh.f90 and prec.f90 with mesh_single.f90 and prec_single.f90.
For the spectral method, just call "make precision=single" instead of "make". Use "make clean" evertime you switch precision
2011-02-25 09:25:53 +00:00
Christoph Kords
2f503f5cdb
added "Lp" as crystallite output
2011-02-25 08:15:26 +00:00
Christoph Kords
e022810e66
fixed problem in internal stress calculation for periodic neighborhood
2011-02-25 08:10:11 +00:00
Martin Diehl
f525c02ded
added single precision libraries for FFTW
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First try of implement single precision crystal plasticity, not working yet.
polishing text about geometry construction.
polishing postResults, still having problems concerning machines without MSC installation
2011-02-24 18:39:57 +00:00
Christoph Kords
e49e5e13af
* in flux calculation: take care of special case for single element model
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* do not overwrite "constitutive_nonlocal_rhoDotFlux" when doing a state perturbation, so we can use it for output
2011-02-24 10:01:41 +00:00
Christoph Kords
8aef9b1c13
check for twin nodes only in direction of the surface normal. this solves a problem with models of single element thickness and periodic fluxes.
2011-02-24 09:26:30 +00:00
Christoph Kords
fed53a7e60
in subroutine "mesh_marc_get_mpieOptions": need at least one additional string after keywords "$mpie" and "periodic", not two as it used to be
2011-02-23 12:33:51 +00:00
Christoph Kords
430966eb20
sorry, forgot to commit the numerics.f90, too
2011-02-23 12:30:52 +00:00
Christoph Kords
96d3682d5e
* new global integer variable "numerics_integrationMode" (1 indicating integration of central solution, 2 indicating integration of perturbed state)
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* combined "integrator" and "integratorStiffness" in new global variable "numerics_integrator"
2011-02-23 08:29:51 +00:00
Christoph Kords
d835380bc0
* "constitutive_nonlocal_flux" is set to zero in "constitutive_nonlocal_dotState", not in "constitutive_nonlocal_microstructure"
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* dislocation flux and internal stress calculation now consistent with new definition of slip system lattice according to paper (polarity of screws inverted)
2011-02-23 08:08:06 +00:00
Martin Diehl
8dd1a694a3
extended IO to cope with different name for solverJob and Model
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polishing, added error codes
added FFTW library files
2011-02-21 14:37:38 +00:00
Christoph Kords
b21c153761
restructured constitutive_nonlocal_compatibility and incorporated the "surfaceTransmissivity" in the compatibility calculation
2011-02-16 16:38:18 +00:00
Christoph Kords
24d33bf2ff
* added a new material parameter "surfaceTransmissivity" (default value 1.0) which allows to change the transmissivity of the material surface between 0 and 1
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* now complaining when encountering an unknown nonlocal parameter in material.config
* use same error ID for all material parameters out of bounds
* symmetric flux calculation in side dotState can now be omitted (because of new treatment of periodicity)
* switching back to "local flux balance" (add leaving and entering fluxes at central MP, don't touch neighbor) instead of "flux distribution" (subtract leaving fluxes from central MP and add them at neighboring MP). This has the advantage that there is almost no need for CRITICAL statements in parallelization, so hopefully this results in some speed up.
2011-02-16 16:35:38 +00:00
Christoph Kords
8f626c8989
Now able to have real periodicity for fluxes (fluxes leaving the model on one side enter on the other side).
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To enable this feature one has to add the following somewhere in the marc input file:
$mpie periodic x y z
for having periodicity in all directions
$mpie periodic z x
for having periodicity in x and z direction
etc.
Note that this only works for regular meshes!!!
2011-02-16 16:23:08 +00:00
Alankar Alankar
89ed6f5f66
Did not compile. Fixed missing ,
2011-02-15 12:29:01 +00:00
Alankar Alankar
c39e04644b
Sorting of hex slip-systems done in update 659 was missing. Included again.
2011-02-15 12:21:54 +00:00
Martin Diehl
438bf95105
added ft-based reconstruction of deformed configuration to postprocessingMath.f90 and postprocessingMath.pyf
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also added function to calculate average of tensor
some polishing in mpie_spectral.f90, added sanity check to see im resolution is power of 2
2011-02-14 17:21:31 +00:00
Philip Eisenlohr
171f5375f1
shearrate output now with sign (no |abs| as before)
2011-02-11 10:19:41 +00:00
Martin Diehl
3d7fad6ba9
mpie_spectral.f90: changed fourier transormation, now using the advanced interface to do the tranformation both ways with just one call. now also using the same variable for pk-stress in both domains and the change of deformation gradient in both domains.
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postprocessing: renamed name of python/f2py modul from "reconstruct" to "postprocessingMath", added some numerical operations to use for postprocessing.
2011-02-09 17:47:28 +00:00
Christoph Kords
803e1a8c05
In order to help preventing further memory leaks all array sections now have an explicit instead of assumed shape, e.g. Fe(1:3,1:3) instead of Fe(:,:).
2011-02-09 13:12:46 +00:00
Christoph Kords
466ced911e
* check convergence for nonlocals also in stiffness calculation mode
2011-02-09 08:39:07 +00:00
Christoph Kords
921967c2ba
* found memory leak in nonlocal model! "constitutive_nonlocal_rhoDotFlux" has to have upper index bound of 10 for second dimension, not 8.
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* need to recalculate dislocation velocity in postResults, otherwise we take values of last perturbed state! So the following outputs were up to now showing the perturbed state: shearrate, dislocation velocity, all density rates!
2011-02-09 08:28:47 +00:00
Christoph Kords
17a6c0e59b
enhanced comment on dislocation kinetics
2011-02-08 12:48:50 +00:00
Christoph Kords
6731659aa4
added hint that extreme values of stress and tangent belong to previous cycle
2011-02-08 12:43:30 +00:00
Christoph Kords
0a30fb739a
now reporting extreme values of stress and tangent, that were returned to marc, in output file
2011-02-08 10:25:51 +00:00
Martin Diehl
7a7ca1aab7
mpie_spectral and mpie_interface: changed workingdir from pathToLoadFile to pathToGeomFile
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mpie_spectral and numerics: added switch to prevent pre calculation of gamma_hat. slower, but saves memory
3Dvisualize: started to add support for gmsh (not fully working yet)
reconstruct: new version of f2py/Fortran subroutines for output of results from spectral method
2011-02-07 14:35:42 +00:00
Christoph Kords
faba13f7fd
* now able to introduce some scatter in the initial single dislocation density (only for nonlocal model!) ; setting the parameter "rhoSglScatter" to a positive value generates a gauss distribution for the dislocation density with standard deviation equal to "rhoSglScatter"
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* dislocation stress calculation is only done for nonlocal constitution ("/nonlocal/" keyword is present in material.config)
2011-02-04 15:41:32 +00:00
Alankar Alankar
b362755457
grain orientation shuffling was skipped for /elemhomo/. no clue why, now dropped...
2011-02-03 17:25:58 +00:00
Martin Diehl
fec2c14a4e
removed hard-coded tolerances from mpie_spectral and put them to numerics/IO
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removed storage of full cauchy stres field from mpie_spectral.f90, only average is stored now
added cauchy stress and von mises equivalent calculation to spectral post.
2011-01-31 17:07:42 +00:00
Christoph Kords
b72d75ed05
corrected indices in flux density output
2011-01-28 12:49:58 +00:00
Philip Eisenlohr
c00a42a9a4
fixed last remaining tensor outputs to their transposed versions
2011-01-27 14:29:06 +00:00
Martin Diehl
aa7d5afd94
changed ifort options back to previous ones as -fast is not working
2011-01-26 13:33:44 +00:00
Christoph Kords
05d4d5fef2
* kinetics now according to Mohles; enables solid solution hardening
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* changed example in material.config accordingly
2011-01-26 10:17:42 +00:00
Philip Eisenlohr
6ac06af517
sorry, forgot to alter the most important part: post_results..! eventually, the t16 has defgrads and friends in correct format: du_i/dx_j is listed as linear array (1,1),(1,2),(1,3),(2,1),...
2011-01-24 16:23:37 +00:00
Philip Eisenlohr
4ee40df5ba
transposed writing into t16 file (and screen/debug) did not work with just stating array(1:3,:)...
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fixed by using math_transpose3x3 (and similar) instead.
2011-01-24 15:02:19 +00:00
Philip Eisenlohr
794aeb253b
crystallite and CPFEM now print/output tensors in ij notation (used to be, particularly in the t16, ji, i.e. transposed...)
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math reports random seed used for rnd() generation
2011-01-20 19:25:45 +00:00
Martin Diehl
b546d3bb91
some corrections regarding Multicore-support on mpie_spectral.f90 and makefile
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slight changes on mpie_spectral.f90 regarding file output
2011-01-12 17:02:42 +00:00
Christoph Kords
062c6b3d54
* allow zero cutoff radius
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* added missing error codes
2011-01-12 12:36:48 +00:00
Christoph Kords
d92f992eb7
if nonlocal ip has local neighbor assume perfect transparency of the (perhaps virtual) phase boundary. this is only a quick fix! need to rethink the way constitutive and real boundaries are treated!
2011-01-11 18:00:29 +00:00
Christoph Kords
6a3dd78259
fluxes are disabled when keyword "/nonlocal/" is omitted in the material.config (this is a way to use the constitutive_nonlocal model as a local dislocation based model)
2011-01-11 14:55:36 +00:00
Martin Diehl
ccc6aac10b
did not delete mpie_spectral2.f90 properly
2011-01-07 13:11:32 +00:00
Martin Diehl
71fb5eedf2
changed makefile: material subroutines are now compiled using openmp, enabled linux threads for fftw3 (also did some slight changes to enable that in the fortran source code)
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renamed mpie_spectral2.f90 to mpie_spectral2d.f90 (testing file, not properly working at the moment)
changed file extension and variable names in mpie_spectral.f90 and mpie_spectral_interface.f90 from "mesh" to "geom". Removed direct output from mpie_spectral.f90, all output is now base on materialpoint_results(:,1,:)
2011-01-07 12:56:45 +00:00
Franz Roters
9447330ab0
ATTENTION repository has been moved to new server!
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Now at musvn1:/home/svn/repos/cpfem
2011-01-05 16:11:51 +00:00
Franz Roters
096a4803b0
some polishing concerning openMP initialization
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number of threads is now written to *.out file
2010-12-02 11:04:29 +00:00
Denny Tjahjanto
36f27edd75
1. Adding more comments
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2. Changing 'subroutine' into 'function' for optimizing the computation time
2010-11-26 11:50:20 +00:00
Christoph Kords
6b199e7830
allow 2digit values to be read in for MPIE_NUM_THREADS
2010-11-25 10:34:55 +00:00
Christoph Kords
ea6a6c9503
* environment variable MPIE_NUM_THREADS now determines number of threads used in parallel regions
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* default value of the OMP_NUM_THREADS variable has to be restored at the end of mpie subroutine, since marc also seems to use and change(!) this
* usage: "export MPIE_NUM_THREADS=<number of threads>" to set variable in shell, then restart mentat and compile with option 3 (at the moment this does only work on ws 6, since all other workstations use compiler option "-save"; this puts all local variables by default in static memory, which is a killer for parallelization!)
2010-11-19 17:45:27 +00:00
Christoph Kords
b9b226548c
* enclose wall time measurement for LpAndItsTangent and count of leapfrogbreaks by CRITICAL construct
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* better use SINGLE (having an implicit barrier at the end) instead of MASTER construct
* deleted all explicit BARRIERs after do loops since parallel loop construct implies barrier at the end
2010-11-19 17:29:29 +00:00
Christoph Kords
15728d3305
enclose wall time measurement for dotState and dotTemperature function by CRITICAL construct
2010-11-19 17:19:03 +00:00
Christoph Kords
4f267f4375
parallelization now works properly (not yet tested extensively though):
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* had to add some BARRIER constructs
* only the master thread is allowed to increase the state counter
yet parallelization seems not to give a significant decrease in calculation time with nonlocal model (because of too many CRITICAL statements?)
2010-11-11 16:16:05 +00:00
Christoph Kords
14594dc9e2
* OpenMP does not like unbounded array subscripts in function calls
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* some write statements were still not enclosed by CRITICAL construct, some needed a MASTER construct
2010-11-11 13:14:53 +00:00
Christoph Kords
bca951325d
* cpfem will now produce a warning if all components of the stiffness tensor are close to zero
2010-11-04 18:18:01 +00:00
Philip Eisenlohr
54748bb6a5
cycleCounter reset was 0 now -1 ==> occurence of jacobian calculation is now correct, i.e. always calc at start of new increment
2010-11-04 18:15:50 +00:00
Christoph Kords
405d5529e7
* checked and corrected parallelization of code. compiles now successfully, but simply aborts computation with first parallel directive without any comment :-(((
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* also put a call to constitutive_microstructure at the start of each crystallite_integration subroutine like it was before. need that for nonlocal model in case of crystallite cutback
2010-11-03 17:22:48 +00:00
Philip Eisenlohr
0dd99cb965
lattice: (re)introduced _symmetryType function to replace unsafe lookup array
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numerics: polishing
mpie_cpfem_marc: polishing
..powerlaw: aware of symmetryType function
crystallite: aware of symmetryType function, smaller leapfrog acceleration
IO: new warning 101
CPFEM: range of odd stress is now -1e15...+1e15, H_sym is used for stiffness
2010-11-03 14:58:11 +00:00
Denny Tjahjanto
763c20b302
Introducing the capability to restart jobs that crashed in the middle of sims. At the moment, this feature is exclusive for Marc.
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Major changes:
CPFEM.f90 =>
1. Moving the initialization out of CPFEM_general into a separate subroutine, which is directly called by the hypela2 (Beware, the Abaqus version must also be modified in order to adapt with this change).
2. Restore primary state variables in CPFEM_init from binary files when requested (Marc flag: restart read).
3. Writing primary state variables into binary files (Marc flag: restart write).
FEsolving.f90 =>
1. Adding functions to recognize Marc restart flags: read and write and the corresponding restart file (parent job).
2. Change the initial value of cycleCounter = -1 in conjuction with the change made the ping-pong scheme
homogenization_RGC.f90 =>
1. Just syntax polishing.
IO.f90 =>
1. Adding functions/subroutines to open binary files for writing the primary state variables for restart purpose.
mpie_cpfem_marc.f90
1. Modification of the general scheme for collection and calculation in order to accommodate the newly added restart feature.
2010-11-03 14:39:18 +00:00
Christoph Kords
4c20daa00d
state loop count was wrong for adaptive euler integration
2010-10-28 12:22:17 +00:00
Martin Diehl
17812c1f9e
added raw output, gmsh output is still included
2010-10-27 17:15:49 +00:00
Christoph Kords
9320d48305
in RKCK45 state integration: dotState was not saved in last Runge-Kutta step
2010-10-27 08:48:04 +00:00
Christoph Kords
f5f3ef5ecc
* have to reset dotState to zero before call to collectDotState (only important for nonlocal calculation)
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* in Fixed Point Iteration: update dependent states after state preguess was missing; on the other hand, the first call to constitutive_microstructure was obsolete
2010-10-26 14:04:33 +00:00
Christoph Kords
4439282239
no change to previous version, just forget to mention one important change of the last revision:
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* fluxes are now again calculated and distributed only! by the originating material point. this means that the central MP might change the dotState of its neighbor. have to see whether locks slow down parallel computation
2010-10-26 13:49:58 +00:00
Christoph Kords
62d06001ea
* corrected compatibility for screws (always positive)
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* detection of grain boundary in constitutive_nonlocal_microstructure with the help of transmissivity
* enforce positive densities in constitutive_nonlocal_microstructure (needed because dotState does not create cutbacks for negative densities anymore)
* reset single mobile densities below certain threshold to zero (also done in constitutive_nonlocal_microstructure)
* constitutive_nonlocal_kinetics only gets local state variable as input, no need for the entire array here
* dv_dtau is always positive
* multiplication is only active when there is already some initial density of the respective type
2010-10-26 13:42:18 +00:00
Christoph Kords
366d52bd71
* former "relevantRho" and "relevantResistance" is renamed to "atol_rho" and "atol_resistance" and now used as an absolute tolerance for the state residuum. before it was used rather as significant state, so whenever the state dropped below that value it was considered converged. (In dislotwin and titanmod constitutive law there is only one value atol_rho which is used for all the states, though the state array consists not only of densities. We need further parameters here!)
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* somewhat simplified convergence check for adaptive euler and runge-kutta
2010-10-26 13:16:37 +00:00
Martin Diehl
26cb618b6d
changed calculation to small strain/cauchy stress
2010-10-20 11:27:10 +00:00
Martin Diehl
da35eaa8a1
changed spectral algorithm to version proposed by Ricardo 2001 (using tau_field instead of stress_field).
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Still using largestrain-formulation
2010-10-20 09:27:47 +00:00
Martin Diehl
3837dad51e
fixed bug in mpie_spectral.f90 concerning spectral method (now deltaF hat get the right value)
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added mpie_spectral2.f90, a version that should get the new algorithm proposed in 2010. until now, it is the same as mpie_spectral.f90 (large strain formulation by suquet et al) but with c2c, c2c FFT
2010-10-20 08:59:00 +00:00
Christoph Kords
e49de75fe3
stiffness calculation now only needs a single function call to the respective integrator method instead of one call per grain (which seems to heavily slow down the computation). also no special treatment for non-local material points anymore.
2010-10-15 14:57:13 +00:00
Christoph Kords
fffe731447
* had to correct nonlocal slip system compatibility and flux calculation. last update gave wrong results.
2010-10-15 13:19:26 +00:00
Philip Eisenlohr
61f8a5fcbe
corrected UpperCase "SolidSolutionStrength" in config file parsing.
2010-10-15 12:59:00 +00:00
Martin Diehl
3c502561ee
added matrix multiplication 3333x33 to math.f90
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added some parameters for spectral method to numerics.f90 (tolerance)
changed error message concerning spectral method in IO.f90
corrected calculation of stress BC in mpie_spectral.f90
2010-10-13 16:04:44 +00:00
Christoph Kords
724960686f
* in nonlocal model: dislocation flux now with valid description also for large angle grain boundaries; transfer of dislocations from one slip system to the other according to new variable "constitutive_nonlocal_compatibility" which depends on the angle between slip plane normals and slip directions and is updated once per cycle in function "crystallite_orientations"
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* reactivated debugging functionality for "non-standard" integration methods
2010-10-12 13:08:54 +00:00
Christoph Kords
efd92d9b51
allocation of special state variables for "non-standard integration" was erroneous. used to produce segmentation fault for integration method 4 and 5.
2010-10-12 12:11:24 +00:00
Christoph Kords
fce7590c17
* now able to choose method for state integration (integrator and integratorStiffness in numerics.config); standard is "Fixed Point Iteration", which is basically the same as before; others available are "Explicit Euler", "AdaptiveEuler", "Classical Runge-Kutta" and "Runge-Kutta Cash-Karp"
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* now remembering stiffness similar to how we do it for Lp etc.; avoids undefined stiffness values for nonconverged stiffness calculation
* non-local stuff:
* changed non-local kinetics (Gilman2002)
* enforce zero shearrate for overall carrrier density below relevant density
* enforce zero density for those states that become negative and were below relevant density before
* dislocation velocity is not limited by V^(1/3) / dt anymore
2010-10-01 12:18:49 +00:00
Martin Diehl
9927cd7adb
changed format of resolution. instead of reading exponent of two, now the number given equals directly to the number of FPs. Allows us to use arbitrary number of FPs.
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example:
OLD: reading 5 results in 2^5=32 FPs
NEW: reading 33 results in 33 FPs
2010-10-01 10:42:15 +00:00
Alankar Alankar
2cc7bc38d7
Fixed a missing ','. Assigned plane and direction names.
2010-10-01 06:32:44 +00:00
Philip Eisenlohr
1ae252c1ce
altered hexagonal slip systems
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(needs comparison to former set, which is potentially wrong)
2010-09-30 17:31:19 +00:00
Claudio Zambaldi
b85f9b0770
material.config: changed texture of microstructure 1 from 1 to 3, because 1 needs a ODF file which is not in the repository and makes the one_element_model.proc complain.
2010-09-30 12:55:38 +00:00
Philip Eisenlohr
a8dfdc6487
added _mul33xx33 double contraction: A_ij * B_ij = scalar
2010-09-30 09:32:49 +00:00
Christoph Kords
cb4b4afc88
corrected header for math_qRot
2010-09-30 08:46:58 +00:00
Philip Eisenlohr
b259fbd9c6
1) added distribution of leapfrog breaks
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2) lattice_symmetryType is now a function (former lookup array was buggy)
3) stricter check of state var values (>0!) and memory deallocation done
2010-09-30 07:31:53 +00:00
Alankar Alankar
e562df35a9
Added more state dependent variables in post results.
2010-09-29 06:35:08 +00:00
Martin Diehl
5a51082977
polishing, changed calculation of stress BC.
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prevent updating of gamma hat in case of perfect plasticity
2010-09-24 13:27:53 +00:00
Alankar Alankar
d94236b2d6
Declaration of filename etc. was missing. Fixed now.
2010-09-23 09:13:46 +00:00
Philip Eisenlohr
83a921eec2
crystallite: polishing
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rest: added "$ID" and line ending settings...
2010-09-23 08:05:50 +00:00
Philip Eisenlohr
a467fb4ae3
forgot "$ID" and setting line endings...
2010-09-23 08:03:00 +00:00