b5be4c3fa5
compatible with material.yaml
2021-08-04 17:45:25 +02:00
dd2d569482
ensure that vectorization works
2021-07-25 21:28:35 +02:00
de428efca5
add_pole is working again
2021-07-18 18:58:05 +02:00
212a4ed63c
don't test implementation details
2021-07-18 15:57:51 +02:00
e54f032f1e
Merge remote-tracking branch 'origin/development' into restructure-Orientation-2
2021-07-18 15:09:40 +02:00
7745640393
consistently use prefix as modifier
2021-06-28 23:41:50 +02:00
0a22916aba
not a double subscript
2021-06-19 15:13:27 +02:00
abd660e62d
Merge remote-tracking branch 'origin/development' into polishing
2021-06-19 13:28:56 +02:00
71634f6ce9
split into two tests, one will fail on Ubuntu
2021-06-19 08:12:49 +02:00
56b011aa54
better have tests
2021-06-18 21:11:01 +02:00
db1882e4de
polishing
2021-06-17 18:26:37 +02:00
9b1f5c7783
testing new functionality for Neper / vti
2021-06-15 23:19:08 +02:00
218e6a79a8
VTK image data is the appropriate type, not VTK rectilinear grid
...
FFTs require constant spacing in all three directions, this is
guaranteed by the vtkImageData but not by vtkRectilinearGrid
2021-06-15 19:02:26 +02:00
5202da13ea
better not have a "Lattice" object with "lattice" parameter
2021-06-07 21:49:04 +02:00
41e5f0c06c
re-introduced multiple inheritance
2021-06-06 22:25:42 +02:00
3c8d06b6f1
encapsulating all lattice(-family) related data
2021-06-03 11:18:00 +02:00
4701eea10f
decoupling Orientation and Lattice/LatticeFamily
2021-06-03 10:02:49 +02:00
302da1f76a
separating functionality
2021-06-02 17:11:37 +02:00
b55d51491d
separating functionality
2021-06-02 08:48:45 +02:00
e281d8384f
distinguish 'family' and 'lattice'
...
this requires the user to specify a keyword ('*' notation in __init__).
Since all 'from_xxx' methods anyway require a keyword, it does not
causes much more work (one explicit keyword in case of cube orientation
when using __init__ directly).
2021-06-01 21:51:28 +02:00
684016f3e3
utility function without connection to an object
2021-06-01 21:29:35 +02:00
02256be8dc
Merge branch 'rotation-couple-kinematics' into 'development'
...
avoid static methods
See merge request damask/DAMASK!393
2021-05-31 15:55:36 +00:00
0ef5825d35
Merge branch 'Results.add_grid_filters' into 'development'
...
Result.add_xxx for functions on regular grids
See merge request damask/DAMASK!394
2021-05-31 05:46:06 +00:00
94b6be4e83
preferred way to say that something needs to be implemented
2021-05-29 10:54:34 +02:00
46dc6b4dab
functionality to add field data on regular grids
...
allows to add curl, divergence, and gradient to results from the grid
solver
2021-05-28 15:38:00 +02:00
89fc2f05cf
no need to attach static data
...
if needed, a 'kinematics' function that provides slip direction and
plane normal rotated according to the orientation would be helpful
2021-05-27 20:23:22 +02:00
bfc3fe410f
no direct connection to Orientation object
2021-05-27 19:10:23 +02:00
545a085c93
no need to hide, just add suffix to avoid clash with string argument
2021-05-27 18:41:42 +02:00
40698740aa
fixed symmetry handling
...
- ort not tested, no examples, no documentation => removed
- aP is the opposite of isotropic => removed
isostropic materials can be easily specified as cI or cF, using C_44 =
1/2 * (C_11 - C_12). Acceptable extra effort for special use case
orthorhombic can be easily implemented if needed, but needs test,
documentation, and examples
2021-05-24 15:45:25 +02:00
10c6070873
added {123} slips systems of bcc
2021-05-20 18:45:15 +02:00
85ecb68b8f
Merge remote-tracking branch 'origin/development' into MatrixInteraction_clean
2021-05-11 06:00:16 +02:00
053c427509
adjusting to new interaction matrices
2021-05-09 14:50:55 +02:00
b1ad8197f2
object oriented approach
...
Orientation (of special lattice) should not have generic attributes
Also, import at the beginning of the file
2021-04-29 20:59:54 +02:00
ff8ce3840b
handle infinite loop
2021-04-28 08:03:22 +02:00
de79d2d897
test handling of Marc results
2021-04-26 00:28:39 +02:00
62c987badf
add tracer to vtk files
2021-04-25 23:54:33 +02:00
d4a46b9be8
Merge remote-tracking branch 'origin/development' into drop-old-DADF5-support
2021-04-25 17:34:14 +02:00
0459f17f58
improved usability
2021-04-25 07:58:15 +02:00
18aa6f7f12
support for string arrays
...
allows to add phase label from mapping. Only scalar string arrays are
allowed (no real restriction)
2021-04-24 22:50:59 +02:00
3977e230b3
documenting and ensuring consistent argument names
...
'name' for a dataset matches the analogy to a file name
2021-04-24 14:47:45 +02:00
4d67c85a33
clarify out-of-place behavior and document return values
2021-04-23 23:32:09 +02:00
37df78a8e0
don't show progress bar for empty iterations
2021-04-10 15:01:50 +02:00
07d573a56d
more helpful dataset descriptors
...
phase label for single phase material not helpful
2021-04-10 09:32:21 +02:00
63b343ad87
Merge branch 'development' into allclose-rotation-orientation
2021-04-10 08:05:25 +02:00
e89236b14d
bugfix:
...
don't overwrite data when doing a 'place-like' operation to merge
datasets
2021-04-08 17:36:33 +02:00
00aed99419
naming of tests should follow naming in class
2021-04-08 13:39:48 +02:00
bc1454970c
mandatory symmetry
...
if symmetry is not of interest, damask.Rotation should be used
2021-04-06 22:49:08 +02:00
bf2515c4c1
removed `Grid.diff` in lieu of `__eq__`
2021-04-06 12:10:35 -04:00
bf4c88a39e
renamed result.read to get; polishing
2021-04-06 11:39:44 -04:00
d5806075d4
distinguish isclose/allclose and __eq__
2021-04-05 22:15:03 +02:00
115e3dd4c7
simplified
2021-04-05 17:18:12 +02:00
9db1ef9ed7
polishing
2021-04-05 13:41:49 +02:00
65b03aeb2d
Merge remote-tracking branch 'origin/development' into Results.read-.place
2021-04-05 10:22:49 +02:00
62c85db745
out of place behavior
2021-04-05 08:03:00 +02:00
e1d57f176d
simplifying
...
[] has a special meaning for glob, use () to indicate direction for IPF
color. It is anyways the sample direction, not a crystallographic
direction
2021-04-04 19:05:58 +02:00
d78e0085fc
simplified
2021-04-04 18:32:17 +02:00
6f3dc80079
simplified/using new functionality
2021-04-03 16:32:48 +02:00
1b2d892b42
keep reference folder clean
2021-04-03 07:31:31 +02:00
20d0242d59
using new logic
2021-04-02 12:21:27 +02:00
cf1ce6a1fe
support for masked array
...
masked arrays are the outcome of Result.place
2021-04-02 08:07:22 +02:00
f6d6aefe1d
function renaming; rewording of help messages
2021-04-01 18:41:28 -04:00
84e117c6b3
polished and added tests
2021-04-01 17:26:51 +02:00
4b9fcf2f77
testing new read functionality
2021-04-01 14:55:50 +02:00
85aaaa96f3
new tests
2021-04-01 10:47:45 +02:00
8a3af87e3e
Merge remote-tracking branch 'origin/development' into spring-cleaning
2021-04-01 00:09:51 +02:00
07c9cf5f1a
- improved reporting and slicing of table.
...
- implemented numpy-like `allclose` and `isclose`
2021-03-31 18:30:07 +00:00
e9c65dee73
documenting and testing
2021-03-31 10:59:21 +02:00
be9e00347b
cleaning
...
dropped support for legacy table
2021-03-27 10:11:31 +01:00
111a1a76c6
cleaning
2021-03-27 07:35:49 +01:00
9fd244d8a0
cleaning
2021-03-26 20:59:49 +01:00
9e9eb391ba
handle floating point errors
2021-03-25 22:33:14 +01:00
3b392281e4
consistent naming in HDF5 output
2021-03-25 19:22:59 +01:00
fe0cd8e5e2
transparently handle orientations/rotations
2021-03-25 15:30:31 +01:00
1ff6a09746
tests/specifications
2021-03-23 18:51:21 +01:00
572c3204d0
let the computer do the work
2021-03-23 14:28:56 +01:00
e0e088eaa8
EBSD dataset for testing
...
use only non-segmented data. Automatically fall back to numeric phase
names if cell_ensemble_data is not found
2021-03-23 13:42:04 +01:00
394fda5f37
improving import from DREAM.3D
...
- no duplicated entries even for non-segmented data
- using phase labels from file
- material.yaml: Dummy homogenization and phase
- tests to ensure correct order and match between Grid and
ConfigMaterial
2021-03-20 12:56:18 +01:00
35c5bfcc45
reference files for DREAM.3D operations
...
will be used for the configuration of material.yaml and grid (using
symbolic links)
2021-03-19 11:45:04 +01:00
a26e586b14
More general 'delete' (accepts iterables) and backports of '|' and '|=' for union/add.
...
'|=' would work for python 3.9 without extra code, but '|' unfortunately casts 'damask.Config' (subclass of 'dict') to a 'dict'.
2021-03-09 19:15:15 +00:00
175d724ded
added keepdims=False option to project_stereographic
2021-02-27 18:38:40 -05:00
ea763fd941
generalized stereographic projection to cope with all three directions (x,y,Z)
2021-02-27 11:15:01 -05:00
2549d7a05a
[skip ci] removed debug print statement
2021-02-24 15:50:06 +01:00
69316f186b
fixed ConfigMaterial.from_table; 2D grid.from_table now acceptable
2021-02-23 11:50:13 -05:00
4a00254dba
shortened material_add and allow for multi-constituent; broken from_table...
2021-02-22 22:47:08 -05:00
0461c404f7
numpy uses __array__ for casting
...
avoids infinite loop of __init__, __getitem__, and shape. Found on
8cf07f6113
2021-02-22 18:52:06 +01:00
67f0ab2ce8
silence deprecation warning
2021-02-22 08:46:28 +01:00
f609b61157
Merge branch 'development' into account-for-floating-point-precision-in-orientation
2021-02-15 16:26:25 -05:00
6bbd55d967
exchanged c for x in from_cubochoric
2021-02-15 16:25:36 -05:00
002cfbd085
Merge branch 'account-for-floating-point-precision-in-orientation' into 'development'
...
ensures that at least one orientation in the FZ is found
See merge request damask/DAMASK!337
2021-02-15 20:53:37 +00:00
fe63adcca4
mimic python error message and ensure that error is raised
2021-02-12 18:20:39 +01:00
9e8a243d6f
avoid name conflict with lattice parameter 'c'
2021-02-12 12:15:08 +01:00
4bcbcb34d0
ensures that at least one orientation in the FZ is found
2021-02-09 23:58:00 +01:00
cab5a5cec7
homogenization 'none' name misleading.
2021-02-04 15:37:40 +01:00
14ce127dc4
fraction --> v
2021-02-04 13:46:01 +01:00
d76543f759
better name
2021-01-13 14:57:58 +01:00
f4247e0f35
simpler (and scipy compatible)
2021-01-13 09:35:42 +01:00
2d6e6a2370
Rotation composition uses "*"; application of Rotation to object uses "@"; "apply()" works on both
2021-01-12 18:57:33 -05:00
f0351e403a
removed duplicate test
2021-01-07 11:01:15 -05:00
bde66d85fc
Merge branch 'development' into python-improvements
2021-01-07 10:58:33 -05:00
94cfe28128
polishing help; Rotation.apply(Rotation) now acceptable.
2021-01-06 18:03:10 -05:00
acbb564afc
restored functionalitity for adding list.
...
got accidently lost
2021-01-04 07:23:14 +01:00
d8b4b7e0f5
!= and == work componentwise
2021-01-03 21:52:19 +01:00
f48a446353
compatible with scipy.spatial.transform.Rotation
...
also introduced inplace variants and '/' as multiplicative inverse of
'*'
2021-01-03 16:08:22 +01:00
98723cb0ed
need to handle special case of Re() = 0
...
ensuring that the real part is positive seems to be a good idea on first
sight, but it would be easier to simply acknowledge that qu = -qu
2021-01-03 15:50:15 +01:00
5f1399acc3
consistent behavior with other classes
...
python dictionary operates in-place, so wrappers for out-of-place
behavior let it use like the other DAMASK classes
2021-01-03 12:09:21 +01:00
6fe1ff8e39
fixed test for rodrigues parametrization
...
for angle close to 180deg, the sign of the axis does not matter
2021-01-03 11:50:45 +01:00
da62daf15d
added test for appending rotation lists; better check for type==list
2020-12-28 12:26:09 -05:00
6cc78cb41e
Merge branch 'misc-improvements' into 'development'
...
Misc improvements
See merge request damask/DAMASK!302
2020-12-18 15:19:04 +01:00
35f9861818
Fortran standard is 2018
...
will not work for older compilers
2020-12-18 15:19:04 +01:00
403ac693da
need to pass init argument to dict superclass
2020-12-17 18:08:55 -05:00
aad123f41b
Merge branch 'table-getitem' into development
2020-12-12 19:58:42 +01:00
36e4042f0b
removed "where" method from Table class
2020-12-11 19:31:19 -05:00
32c2de6b91
Ensuring regular spacing for grid
2020-12-10 22:47:30 +01:00
4286fc3b82
Merge branch 'development' into misc-improvements
2020-12-10 20:21:00 +01:00
78192ef3fd
clearer naming + better comments, thanks to @p.eisenlohr
2020-12-07 17:49:37 +01:00
ed286ee09f
Merge branch 'rename-grid-2' into misc-improvements
2020-12-05 09:50:46 +01:00
171d642dbd
rename: Geom -> Grid
2020-12-04 07:50:47 +01:00
0fdefa5e78
renames:
...
after the rename of "grid" to "cell", the name cell should not be used
for the coordinates of the cell centers. In agreement with the names
x_p/u_p for point positions/displacements, now the "point" is used to
refer to the materialpoints (i.e. cell centers)
Additionally, "_node"/"_point" are now suffixes to
"coordinates"/"displacements".
Finally, "coords" is renamed to "coordinates"
2020-12-03 23:59:37 +01:00
ac0a20696c
rename: grid -> cells
2020-12-03 22:16:34 +01:00
4877334986
added getitem and where functionality to Table
2020-12-02 19:25:54 -05:00
d3a5979d25
meaningful result
2020-12-02 14:45:47 +01:00
aa8f30d746
Merge branch 'development' into ShowGrainBoundaries
2020-12-02 12:50:04 +01:00
1c2cdbd5a1
support of all standard numpy types
...
+ tests
2020-11-30 12:33:21 +01:00
813ef927c4
consistent with "save_XDMF" (capitalized)
2020-11-30 09:28:46 +01:00
4d2bf37193
Merge branch 'lattice-structure-rename' into ShowGrainBoundaries
2020-11-29 20:53:58 +01:00
1d05edd7b3
fixes:
...
- need to get crystal structure as attribute in test (generic function
was removed, because the crystal structure is in general not the same
over the whole domain)
- consistent sorting of attributes
2020-11-29 09:06:47 +01:00
31df4c04c8
added test
2020-11-25 12:51:52 +01:00
5ab2847b36
polishing
2020-11-23 20:06:34 +01:00
cbe8160e13
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-23 19:55:34 +01:00
7356330cf6
Merge remote-tracking branch 'origin/new_names_result' into development
2020-11-23 11:49:15 +01:00
24fabdec22
Merge branch 'development' into vector-mechanics
2020-11-22 12:02:29 +01:00
2de3a6a205
fits better to stretch_left/right
2020-11-19 22:46:52 +01:00
a87596cefc
return rotation type (ensures proper rotation)
2020-11-19 22:36:19 +01:00
a4b5c2a537
shorter (but still self-explanatory) name
2020-11-19 15:20:44 +01:00
6e5cb60132
general tensor functionality
2020-11-19 15:16:01 +01:00
903c185ee6
distinguish 'file not found' and 'invalid file'
2020-11-19 10:39:41 +01:00
cb22c34db2
Geom.load_ASCII now auto-shifts material indices
2020-11-18 18:25:25 -05:00
843d7d8cac
Merge remote-tracking branch 'origin/development' into new_names_result
2020-11-18 21:37:52 +01:00
564ee6c96a
make uvw/hkl keyword-only arguments
...
avoid to prefer one over the other, since they are mutually exclusive
2020-11-18 16:45:53 +01:00
870c0f7aca
removed aliases
...
required bump of DADF5 version
2020-11-18 14:53:11 +01:00
89c748fdf1
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-18 13:55:05 +01:00
6bedd84759
self-explanatory names
2020-11-18 08:15:04 +01:00
fa25a13264
fixed typo
2020-11-16 10:34:49 -05:00
de20e6b35d
code shortening; list_predefined() --> property "predefined"
2020-11-16 10:23:26 -05:00
5ebde607a2
einsum simplifications
2020-11-16 07:43:20 +01:00
9b9d83d93c
adding '_tensor' not needed
2020-11-16 01:15:39 +01:00
b893967b68
more systematic names and extended docstrings
2020-11-16 01:02:36 +01:00
6f81f5278d
separating general tensor math from mechanics operations
2020-11-16 00:13:34 +01:00
fd8743af5e
clearly distinguish seeds for tessellation and seeds for RNG
2020-11-15 13:49:17 +01:00
1541ac0add
more intuitive use
2020-11-15 12:38:54 +01:00
01d84c1477
testing also functions with graphical output
2020-11-15 11:49:52 +01:00
15af12bbb4
__ne__ is automatically set to !__eq__, __neq__ has no special meaning
2020-11-15 11:38:26 +01:00
51e5dda702
documentation + consistent string formatting
2020-11-15 10:54:20 +01:00
149fce0a7e
increase test coverage
2020-11-14 19:42:52 +01:00
764aacf2a1
increasing test coverage
2020-11-14 17:54:47 +01:00
9eb4e2d0de
corrected handling of scalar/array arguments
...
+ more tests
+ corrected handling of numpy types
2020-11-14 17:26:38 +01:00
6529613726
Merge remote-tracking branch 'origin/development' into vector-mechanics
2020-11-14 15:10:52 +01:00
bacfe9f462
Merge branch 'fix-add_primitive-rotation' into 'development'
...
Avoids coordinate normalization _before_ rotation
See merge request damask/DAMASK!276
2020-11-13 14:11:54 +01:00
7b7b449877
testing fixed behavior
2020-11-13 06:50:57 +01:00
8429a9d695
Merge remote-tracking branch 'origin/development' into modularize-mech
2020-11-11 07:04:23 +01:00
5926f84851
WIP: refactoring Orientation=Symmetry+Rotation, Lattice=subclass of Sym, and Crystal=Lattice+Rotation
2020-11-09 21:20:56 +01:00
287d56fc3d
consistent with new output names
2020-11-08 16:01:11 +01:00
7d4163e8a9
new format of material.yaml
2020-11-08 15:57:06 +01:00
03a68248b5
polishing
2020-11-06 13:25:00 +01:00
bbaeeb02da
Merge remote-tracking branch 'origin/misc-improvements' into h5py3
2020-11-06 13:19:47 +01:00
58a5d2666c
ensure correct Mises mode
2020-11-06 00:10:46 +01:00
4ccd068d3b
catch error in case of exisiting dataset
2020-11-05 23:00:56 +01:00
e649fb195f
update to use variable-length strings
2020-11-05 22:34:41 +01:00
30938a8278
correct order (brackets)
2020-11-05 21:38:00 +01:00
a416f5ed5b
encode/decode for h5py3 not needed anymore
...
attribute values with variable-length strings will be interpreted as
str, not bytes
2020-11-05 16:13:29 +01:00
ae959b9cc2
allow '.' in filenames
2020-11-04 18:08:04 +01:00
2867050397
corrected shortened test logic
2020-11-02 18:31:37 -05:00
4fa44d388d
shortened test for monotonous increase of material index after sorting
2020-11-02 18:21:51 -05:00
cf958d32b4
Merge branch 'development' into vector-mechanics
2020-11-02 15:23:11 +01:00
0ebb9b611d
functionality to sort material id
...
convenient for layered materials
2020-10-31 20:46:21 +01:00
cf740a279e
combine constant with varying data
2020-10-31 09:56:43 +01:00
46e5023f8b
Merge branch 'geom-improvements' into 'development'
...
Geom improvements
See merge request damask/DAMASK!264
2020-10-29 23:53:33 +01:00
0e499eedf3
correct rounding/clearer logic
2020-10-29 18:35:22 +01:00
4b700d367e
improved test
2020-10-29 17:59:44 +01:00
999cf53c07
tests+fixes
2020-10-29 07:42:41 +01:00
855bf124d3
faster
...
https://stackoverflow.com/questions/16992713
2020-10-28 16:53:16 +01:00
21f095c9d8
Merge branch 'flexible-yaml-dump' into development
2020-10-28 16:19:17 +01:00
5f03e8cf8f
0-based material indices
2020-10-28 09:31:55 +01:00
a5a127b787
new tests+ updated results
2020-10-27 16:46:08 +01:00
0804e6ee74
pythonic names
2020-10-27 13:50:47 +01:00
201a62d7c9
easier visualization if verts have a point-cell
2020-10-27 13:19:53 +01:00
4dd387d7f5
compatibility with old pyyaml + test for numpy
2020-10-27 06:39:58 +01:00
bac7ace413
Merge remote-tracking branch 'origin/general-N_constituents' into vtr-only
2020-10-13 17:39:19 +02:00
86d91baf90
0-offset for geom
2020-10-10 10:36:15 +02:00
ffabeacbcb
removing functionality related to deprecated 'geom' format
2020-10-10 09:41:11 +02:00
00e2128e03
don't test ASCII functionality
...
vtr writing in Geom class is alwas serial, no need to wait
2020-10-10 09:02:25 +02:00
0c68d293b6
N_constituents is now a general homog property
2020-10-09 07:44:05 +02:00
1b18cae46b
adjusted to new names
2020-10-02 17:49:52 +02:00
a04966582a
Merge remote-tracking branch 'origin/development' into general-config
2020-10-02 14:54:16 +02:00
58229b8851
relaxed test conditions
...
even threshold between -.5 and +.5 can result in a single material.
2020-10-02 13:26:11 +02:00
a59e64a8e4
renamed TPMS and added more from additional references
2020-09-30 17:28:25 -04:00
33685bc493
allow user do control output style
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(numerics.yaml looks strange otherwise)
2020-09-30 12:32:37 +02:00
5ad46ae021
completely tested
2020-09-30 09:05:23 +02:00
bbed4f9c6e
nice formatting
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will be checked by pre-receive hook
2020-09-30 08:15:02 +02:00
b383a4530e
better name, subclassing for easy extension to load
2020-09-30 07:53:25 +02:00
Martin Diehl