Commit Graph

813 Commits

Author SHA1 Message Date
Martin Diehl 908788271a Merge branch 'misc-improvements' into less-shell-scripts 2020-05-26 07:24:03 +02:00
Martin Diehl 5ad7fe04d0 bugfix:
used wrong type
2020-05-26 07:15:27 +02:00
Martin Diehl 670e08468b reorder
tests depend on other functionality that should be tested first
2020-05-26 06:49:29 +02:00
Martin Diehl 88c49fc4f4 also check values 2020-05-26 06:48:52 +02:00
Martin Diehl 7f09c90c7d different h5py versions seem to throw different errors 2020-05-26 06:39:11 +02:00
Martin Diehl 6f7c7005b0 bugfix:
- proper overwrite
- no out of bounds error for empty time selection (just pick nothin)
2020-05-25 23:54:06 +02:00
Martin Diehl 9855c61747 store vtk file in tmp directory 2020-05-25 23:39:19 +02:00
Martin Diehl 9076fbe525 testing overwrite functionality 2020-05-25 23:05:31 +02:00
Martin Diehl d6877da2b6 single source of truth 2020-05-25 20:15:45 +02:00
Martin Diehl d9d089c359 avoid repetition and do correct encode/decode 2020-05-25 20:13:57 +02:00
Martin Diehl 5d0a2aac8f polishing reporting 2020-05-25 20:13:57 +02:00
Martin Diehl b9e16ea951 overwriting datasets makes sense in special cases
but prevent user from accidently doing that and store the information
2020-05-25 20:13:57 +02:00
Martin Diehl 248f199a7b track creation time 2020-05-25 18:51:10 +02:00
Martin Diehl b1b8d02320 typo 2020-05-25 16:41:23 +02:00
Martin Diehl 9d7158b51a Merge branch 'misc-improvements' of magit1.mpie.de:/damask/DAMASK into misc-improvements 2020-05-25 16:40:23 +02:00
Martin Diehl f07eaf19d0 fixed broadcasting + corresponding test 2020-05-25 16:37:08 +02:00
Martin Diehl 784d6d09d9 cleaning 2020-05-25 15:55:38 +02:00
Martin Diehl dad7c7a2a0 Merge branch 'vectorize_rotation' into misc-improvements 2020-05-25 15:50:03 +02:00
Martin Diehl 3e2cbef780 Merge remote-tracking branch 'origin/development' into vectorize_rotation 2020-05-25 15:46:27 +02:00
Martin Diehl 77b68ab86f using rotation class for rotations 2020-05-25 09:39:39 +02:00
Martin Diehl 39505507f1 not needed anymore 2020-05-25 08:07:12 +02:00
Martin Diehl 17aa3c00dc more tests 2020-05-24 22:52:00 +02:00
Martin Diehl 296308e11e fix for rotation around 90 deg
more tests
2020-05-24 20:52:19 +02:00
Martin Diehl 34adefd4ca simplified 2020-05-24 18:30:45 +02:00
Martin Diehl 594fcb2b72 seems more appropriate 2020-05-24 15:10:53 +02:00
Martin Diehl 3231a49107 centralize functionality 2020-05-24 09:39:58 +02:00
Martin Diehl a26cba1457 calling a few missing statements 2020-05-24 09:06:11 +02:00
Martin Diehl a3d9520c4b polishing 2020-05-23 15:54:28 +02:00
Martin Diehl 82419f8649 testing selection 2020-05-23 10:38:25 +02:00
Martin Diehl 8a848979aa missing test for IPF color 2020-05-23 09:13:45 +02:00
Martin Diehl 0549e33a00 vectorized/fast 2020-05-23 08:38:57 +02:00
Martin Diehl e2cf527dfb add missing test 2020-05-23 08:19:08 +02:00
Martin Diehl b8e83cd263 do not overwrite 2020-05-22 20:42:13 +02:00
Martin Diehl 7bd681a5ed very simple test 2020-05-22 19:04:02 +02:00
Martin Diehl 11eda510aa testing functionality of Lattice separately 2020-05-22 18:45:27 +02:00
Martin Diehl b33de48528 testing broadcasting 2020-05-22 15:12:37 +02:00
Martin Diehl 23b1381eaf give credit 2020-05-21 11:30:25 +02:00
Martin Diehl 16f30a10d0 polishing 2020-05-20 23:50:08 +02:00
Martin Diehl 353fd3ceb6 more tests
now 95% test coverage of Rotation class
2020-05-20 19:16:31 +02:00
Martin Diehl 128a96e7f6 vectorized formula is enough 2020-05-20 18:13:51 +02:00
Martin Diehl bb419d49df polishing 2020-05-20 16:19:12 +02:00
Martin Diehl b59d773689 store all test data together 2020-05-20 15:26:49 +02:00
Martin Diehl 9240dd59b2 mark as internal
all functionality (+ sanity checks) can be done with the class
functionality
2020-05-20 11:11:07 +02:00
Martin Diehl 9694767997 all seems to work now 2020-05-20 09:01:38 +02:00
Martin Diehl 1d8903bb0c transition code 2020-05-20 00:18:44 +02:00
Martin Diehl 1fa4a07bb8 for backward compatibility 2020-05-19 23:39:01 +02:00
Martin Diehl 3e00269179 again some more tests 2020-05-19 23:24:12 +02:00
Martin Diehl 1c53a37de4 more tests and adjustments to tolerances 2020-05-19 21:03:30 +02:00
Martin Diehl a6b0aaffba more tests
Hotfix needed for axis angle to matrix (not used in DAMASK, needs
further investigation)
2020-05-19 19:41:50 +02:00
Martin Diehl de79a5af43 directly test the internal conversions
some work to do ...
2020-05-19 09:55:23 +02:00
Martin Diehl 065c624f94 fix for backward compatibility 2020-05-19 09:10:14 +02:00
Martin Diehl ebf05a279e standard name 2020-05-19 08:59:03 +02:00
Martin Diehl 1a3a4a800e vectorized 2020-05-19 07:59:24 +02:00
Martin Diehl b6eebcd704 small fixes (testing P=+1) 2020-05-19 07:57:40 +02:00
Martin Diehl b200894a40 bugfix and further test 2020-05-19 07:57:40 +02:00
Martin Diehl 3dc90ddb94 use the formula from the paper, not from the reference implementation
a few multiplications should be faster than a transpose
2020-05-19 07:57:40 +02:00
Martin Diehl a25dd1c438 cleaning 2020-05-19 07:57:40 +02:00
Martin Diehl 743e91a78d cleaning 2020-05-17 08:01:34 +02:00
Martin Diehl 652ece6bb3 fix: wrong capitalization 2020-05-17 07:25:17 +02:00
Martin Diehl 2550447169 Merge branch 'development' into docstring-sphinx-adjustments 2020-05-17 00:10:58 +02:00
Martin Diehl a90865c877 non-vectorized versions not needed anymore
using them only for testing purposes
2020-05-17 00:10:18 +02:00
Martin Diehl 9ba419c2c3 Merge branch 'development' into vectorize_rotation 2020-05-16 20:58:06 +02:00
Martin Diehl a4dfd7fc74 missing tests 2020-05-16 17:23:05 +02:00
Martin Diehl 044f069437 bugfix: selected wrong data 2020-05-16 17:06:55 +02:00
Martin Diehl a279785149 Merge branch 'development' into misc-improvements 2020-05-16 17:01:48 +02:00
Martin Diehl 61ac40c259 more tests 2020-05-16 13:54:53 +02:00
Martin Diehl 19638168e6 more sensible type checking and errors 2020-05-16 13:23:32 +02:00
Martin Diehl 9fa1539163 using new names 2020-05-16 11:17:12 +02:00
Martin Diehl 235f3c0df7 bugfix: copy and paste error 2020-05-16 11:16:52 +02:00
Martin Diehl e2ba294b75 bugfix: wrong variable 2020-05-16 09:40:32 +02:00
Martin Diehl 2dc46b783a simplified and tested 2020-05-16 00:58:40 +02:00
Martin Diehl dc508cdfce Merge remote-tracking branch 'origin/misc-improvements' into vectorize_rotation 2020-05-15 23:25:42 +02:00
Martin Diehl 3fd868dc45 Merge branch 'development' into vectorize_rotation 2020-05-15 23:25:36 +02:00
Martin Diehl b5b9bfaa99 need space at end of definition list 2020-05-13 11:36:16 +02:00
Martin Diehl 66b928c5af using doctest style
https://docs.python.org/3/library/doctest.html
https://numpy.org/doc/stable/docs/howto_document.html#sections (section
15)
2020-05-13 10:47:49 +02:00
Martin Diehl 6f3b526811 Merge branch 'development' into docstring-sphinx-adjustments 2020-05-13 10:38:45 +02:00
Karo 90f93d2399 Merge branch 'integrate-lambert' into 'development'
Integrate lambert

See merge request damask/DAMASK!166
2020-05-12 23:36:08 +02:00
Martin Diehl 6928a8290f less whitespace,
alingment only within one vector/tensor
2020-05-10 13:02:26 +02:00
Vitesh Shah c8701a4665 Cleanup/better readability 2020-05-08 12:15:10 +02:00
Martin Diehl b75e98ca3f forgotten debug statements
+ polishing of XDMF output
2020-05-07 19:12:05 +02:00
Martin Diehl c2b4f5516e DADF5_postResults tries to combine datasets, this does not work 2020-05-07 00:14:14 +02:00
f.basile fcd0028b83 avoid line length limit (maximum line length 182 > 132 2020-05-06 14:33:04 +02:00
f.basile d977f2ad25 already merged 2020-05-06 14:26:54 +02:00
f.basile 26f55781ae merge test into gridFilters 2020-05-06 14:26:15 +02:00
f.basile a122a307b9 div test done 2020-05-06 14:14:18 +02:00
f.basile d4091a21a8 grad test done 2020-05-06 13:05:53 +02:00
f.basile 8b4baecdee better looking test fields 2020-05-06 12:54:24 +02:00
f.basile bd518b2806 test_curl done 2020-05-06 12:44:56 +02:00
Martin Diehl 9626833339 Merge branch 'development' into pytest-curl-div-grad-2 2020-05-05 22:45:30 +02:00
Martin Diehl ef4a4dad4a shape property and numpy-like broadcasting
this makes it easy to apply a single rotation to a field
2020-05-05 14:44:08 +02:00
Martin Diehl eeb0df3a55 do not store absolute path 2020-05-05 10:42:54 +02:00
Vitesh Shah 307debebd4 Correct shapes for gradient calculations 2020-05-05 10:22:23 +02:00
Martin Diehl 31c397255d equivalent (for a valid DADF5 file) but faster 2020-05-05 10:18:48 +02:00
Vitesh Shah 0650f46ab1 Tests for gradient 2020-05-05 10:13:30 +02:00
Martin Diehl 14cdc031e0 write XDMF files
the limitation to scalar, 3-vector and 3x3-tensor comes currently from
XDMF/vtk/paraview

extension to multiple constituents and unstructured meshes might be
possible
2020-05-05 09:57:22 +02:00
Martin Diehl 6e99956b58 Merge branch 'development' into misc-improvements 2020-05-05 09:22:53 +02:00
Martin Diehl 5f3f87cd68 vectorizing cubochoric conversions 2020-05-04 17:43:38 +02:00
Martin Diehl 7d1e0850ab test + resulting bug fix 2020-05-03 17:04:03 +02:00
Martin Diehl 5d4b554b00 WIP: vectorizing 2020-05-03 07:48:13 +02:00
Martin Diehl c241eaec15 rely on correct input data 2020-05-03 07:23:46 +02:00