Commit Graph

216 Commits

Author SHA1 Message Date
Philip Eisenlohr 76b08e10bd following stricter Python docstring standards 2019-09-18 21:43:43 -04:00
Martin Diehl 4994c86e67 bugfix: hard-wired keyword resulted in missing materialpoint results 2019-09-16 13:31:49 -07:00
Martin Diehl ee1327c519 [skip ci] typo 2019-09-16 11:21:06 -07:00
Martin Diehl 28bb92021d avoid code duplication 2019-09-16 11:04:05 -07:00
Martin Diehl 980c02b0c3 selected increments by simulation time 2019-09-15 20:19:14 -07:00
Martin Diehl 86fb0a7942 time info needed for filtering of increments 2019-09-15 20:04:52 -07:00
Martin Diehl b3b710c848 polishing 2019-09-15 19:56:07 -07:00
Martin Diehl 4cedcee0b4 handling of increments follows handling of other 'visible'-items 2019-09-15 17:08:03 -07:00
Martin Diehl f6ac8c995f simplified and selected better names 2019-09-15 16:00:19 -07:00
Martin Diehl c76d4d3f87 avoid unneeded arguments 2019-09-15 15:24:23 -07:00
Martin Diehl 88eba27cec avoid name duplication + polishing 2019-09-15 15:10:32 -07:00
Martin Diehl 04aefa84bc more appropriate names 2019-09-15 15:02:16 -07:00
Martin Diehl d413aef7c3 functionality for general calculations on datasets
currently limited to vectorized expressions.
2019-09-14 12:00:23 -07:00
Martin Diehl 8251725bce WIP: different norm types 2019-09-14 10:53:33 -07:00
Martin Diehl e4e9c5f558 support glob matching
more flexibility in selecting active datasets and groups
2019-09-14 09:55:42 -07:00
Martin Diehl b85ac11c49 implemented ideas from discussion with Philip
group matching unified and with wildcard support
time step handling should become more convenient (WIP)
add_norm can not compute abs of scalar, added function for that
general polishing here and there
2019-09-14 09:07:23 -07:00
Martin Diehl c13db4b3ca renaming
on_air/active are not clear. visible seems to be the most appropriate
name
2019-09-13 21:49:22 -07:00
Martin Diehl 898f53295d iter functions for groups
restore original selection after iterating (i.e. temp setting of active)

polishing: correct names and more details for HDF5 meta data
2019-09-13 21:14:52 -07:00
Martin Diehl 69462f8190 polished
strain calculation agrees up to 1e-4 with results from addStrainTensors.
Not too exciting, but ok
2019-09-13 19:37:25 -07:00
Martin Diehl 38f6609ad7 high level functions for selecting output
tested Cauchy stress calculation (comparison with addCauchy.py)
2019-09-13 18:36:06 -07:00
Martin Diehl c5006e264b handling prospector complaints 2019-09-13 16:07:39 -07:00
Martin Diehl 002383afc2 solved problem with postprocessing
- to not 'try' with h5py library, it might have another 'try'. Check
explicitly for empty argument

also some polishing
2019-09-13 16:01:30 -07:00
Martin Diehl b2b625af3e notes from discussion with Philip 2019-09-13 15:17:46 -07:00
Martin Diehl f83a167414 file mode for high level funtion not useful 2019-09-13 09:49:30 -07:00
Martin Diehl 6f008c5d5f rewrite pointwise add function
- all vectorized: Much faster
- passing in all relevant information allows to do sanity checks and add
useful meta data in HDF5
- improved readability
2019-09-13 06:02:42 -07:00
Martin Diehl 3db3e9e762 preparing for use of optional arguments to function 2019-09-11 21:20:14 -07:00
Martin Diehl de313269d9 bugfix 2019-09-11 18:54:54 -07:00
Martin Diehl 953ba53211 adjusting for strict prospector checking 2019-09-11 18:22:33 -07:00
Martin Diehl a6c69a744b do operations vectorized 2019-09-11 17:57:24 -07:00
Martin Diehl 462bb07efd Merge branch 'development' into even-more-HDF5-postprocessing 2019-09-11 16:29:44 -07:00
Martin Diehl bc893762ec no need to inverse a rotation, transpose is faster 2019-09-11 07:29:34 -07:00
Martin Diehl fa2c100d6a need to update microstructure to get grid update 2019-09-04 20:20:55 -07:00
Martin Diehl f415a8cad2 Merge branch 'PythonProspectorRules' into even-more-HDF5-postprocessing 2019-09-04 14:23:07 -07:00
Martin Diehl 28c11cc373 bugfix
-update function was resetting size if not given
-dim does not work an all terminals, therefore also emph new values in
addition to dim old ones
2019-09-04 11:14:44 -07:00
Martin Diehl ef285b482f more references + citation style correction 2019-09-04 08:55:05 -07:00
Martin Diehl 6f07a20919 not sure what this code was intended to do 2019-09-03 17:23:26 -07:00
Martin Diehl 3657f81c59 documenting (in accordance with new prospector rules) 2019-09-03 17:18:06 -07:00
Martin Diehl a428a924eb DAMASK default citation style 2019-09-03 16:34:02 -07:00
Martin Diehl 97fc8a4029 following python3 recommendations 2019-09-03 15:44:28 -07:00
Martin Diehl 234019bb4d dummy stuff not needed 2019-09-03 15:41:16 -07:00
Martin Diehl b0d3615d67 more detailed documentation 2019-09-03 15:32:01 -07:00
Martin Diehl 7d48764999 added documentation and references 2019-09-03 15:25:25 -07:00
Martin Diehl a073f36471 update for solver wrappers 2019-09-03 09:48:42 -07:00
Martin Diehl fea16327ac now properly escaped 2019-09-02 23:42:34 -07:00
Martin Diehl d84cef4fab pep8: W605 / invalid escape sequence '\ ' seems to be a false positive 2019-09-02 23:37:52 -07:00
Martin Diehl 9cf4f9537e documenting 2019-09-02 23:23:46 -07:00
Martin Diehl ba395977db adjusting to new prospector 2019-09-02 11:09:03 -07:00
Martin Diehl 34b3beda27 DefaultMap needed for newer paraview 2019-09-02 10:51:32 -07:00
Martin Diehl c51cf8d506 transferring post processing capabilities 2019-07-15 13:55:14 -07:00
Martin Diehl b6bb8a4650 simple strain calculation for DADF5
further enhancement requires to give optional arguments to
add_genericpontwise
2019-07-06 21:41:29 -07:00
Martin Diehl b6830b3ac1 Merge branch 'development' into even-more-HDF5-postprocessing 2019-06-14 10:28:22 +02:00
Martin Diehl cede188e76 enable to explicitly set the environment
required for running MPI processes when mpi4py is imported
2019-06-07 17:51:27 +02:00
Martin Diehl 1186bd16f5 Merge branch 'development' into even-more-HDF5-postprocessing 2019-06-04 22:39:10 +02:00
Philip Eisenlohr dff690611e fixed origin bug in VTK; VTK can be float; size defaults to 1 as longest dimension 2019-06-03 13:29:30 -04:00
Martin Diehl bf27505faa Merge branch 'development' into geometry-class 2019-05-31 16:21:50 +02:00
Martin Diehl 37de73535d following PEP style guide 2019-05-30 20:08:39 +02:00
Martin Diehl 4cb0ba3803 not needed anymore 2019-05-30 19:26:41 +02:00
Martin Diehl 46f0ad052e direct support for vtk output
- geom_check can now handle multiple files
- microstructure index is stored as integer in vtk file
2019-05-30 15:35:45 +02:00
Martin Diehl b00581f1be less picky on allowed datatypes 2019-05-30 13:29:29 +02:00
Martin Diehl 931fa9d36a standardized and cleaned
-write to file if given
-type casting is done in the geom class
2019-05-30 10:20:07 +02:00
Martin Diehl f30eda0267 no need to loop over files
will procude the same file over and over again
2019-05-30 09:32:37 +02:00
Philip Eisenlohr 17168525b6 use srepr in __repr__ 2019-05-29 18:14:30 -06:00
Martin Diehl 6e790e845a correct rescaling 2019-05-29 19:36:02 +02:00
Martin Diehl 669ca82ce1 formatted return message also on interactive shells 2019-05-28 09:05:10 +02:00
Philip Eisenlohr 1f56ac6a4a streamlining and bugfixing of geom-class 2019-05-27 22:45:34 -06:00
Martin Diehl b69f0efbbc improved and simplified reporting 2019-05-27 22:00:26 +02:00
Martin Diehl 615a4ab40f keep float datatype
based on the assumption, that no mixed float/int data is stored
2019-05-27 09:56:15 +02:00
Martin Diehl 6e06764e2d using (enhanced) central functionality 2019-05-27 08:38:02 +02:00
Martin Diehl b5cec797c0 cleaned 2019-05-26 23:03:31 +02:00
Martin Diehl c8dfba89e5 using class
still a very complex script
2019-05-26 22:49:05 +02:00
Martin Diehl 0da39b0c69 copy and paste error 2019-05-26 22:08:42 +02:00
Martin Diehl 0039ac9551 always add comment at beginning
usually, comments are related to the file history
2019-05-26 21:32:48 +02:00
Martin Diehl 7a500e77b1 not needed (DADF5 is the modern alternative) 2019-05-26 20:53:59 +02:00
Martin Diehl 07c9b8b8f0 avoiding unwanted changes 2019-05-26 20:28:19 +02:00
Martin Diehl feb2340935 self-reporting functionality for updating 2019-05-26 17:58:54 +02:00
Martin Diehl dcb79afc84 more user friendly errors 2019-05-26 12:03:21 +02:00
Martin Diehl be3513d1e0 polishing.
python imports follow PEP8
2019-05-26 09:49:56 +02:00
Martin Diehl 9f63d768de do not keep whitespaces 2019-05-25 13:48:38 +02:00
Martin Diehl 875643c363 same style 2019-05-25 10:24:45 +02:00
Martin Diehl 4788fc6046 making use of new class
@philip: 1D arrangement needed?
2019-05-25 08:37:02 +02:00
Martin Diehl cf374a04dc using new class 2019-05-25 08:21:00 +02:00
Martin Diehl 7b6003fb32 no need for numpy.loadtxt (not compatible with 'to' and 'of' compression 2019-05-25 08:17:51 +02:00
Martin Diehl 420abfa162 use new class 2019-05-24 22:34:27 +02:00
Martin Diehl f20c8fcffd easier generation and modificaton of grid geometries
fits better than the general ASCII table class
2019-05-24 22:30:25 +02:00
Martin Diehl a280f9a4a2 polishing 2019-05-23 17:26:38 +02:00
Martin Diehl f6dda99bfb more post processing functionality 2019-05-23 08:54:20 +02:00
Martin Diehl e7ca371b14 routines to do pointwise operations 2019-05-20 19:56:45 +02:00
Martin Diehl 118c74a268 enable materialpoint output again
accidently lost during a former commit
2019-05-16 22:01:12 +02:00
Martin Diehl 339b86f784 bugfix + more verbose reporting 2019-05-16 11:44:03 +02:00
Martin Diehl 9f7fa5393a fix for scalar datasets 2019-05-16 09:31:13 +02:00
Martin Diehl 3c0c0a2cd1 more flexible in selecting data 2019-05-16 00:27:06 +02:00
Martin Diehl c6863a6124 also consider homogenization/materialpoint results 2019-05-15 23:38:24 +02:00
Philip Eisenlohr 4c7af713f1 added explicit method Rotation.fromBasis, which can treat real and reciprocal basis sets 2019-05-14 12:59:21 -04:00
Martin Diehl f3c77cde87 Merge branch 'development' into MiscImprovements 2019-05-06 16:16:39 +02:00
Martin Diehl 9b0d3def1d small changes suggested by Franz 2019-05-05 22:38:06 +02:00
Martin Diehl 39cc9e35ae Merge branch 'development' into orientation_with_averaging 2019-05-05 22:12:09 +02:00
Martin Diehl ebf01dee4f store grid/size at geometry group
as outlined in the DAMASK results paper
2019-05-03 06:46:22 +02:00
Martin Diehl b8bf329a74 Merge branch 'development' into MiscImprovements 2019-04-30 00:02:35 +02:00
Martin Diehl c72518e52b reflects current temp files 2019-04-28 07:22:12 +02:00
Martin Diehl a5c620379b tools to build a python wheel distribution 2019-04-26 20:54:58 +02:00