store grid/size at geometry group
as outlined in the DAMASK results paper
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@ -20,14 +20,14 @@ class DADF5():
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with h5py.File(filename,'r') as f:
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if f.attrs['DADF5-major'] != 0 or f.attrs['DADF5-minor'] != 1:
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if f.attrs['DADF5-major'] != 0 or f.attrs['DADF5-minor'] != 2:
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raise TypeError('Unsupported DADF5 version {} '.format(f.attrs['DADF5-version']))
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self.structured = 'grid' in f['mapping'].attrs.keys()
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self.structured = 'grid' in f['geometry'].attrs.keys()
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if self.structured:
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self.grid = f['mapping'].attrs['grid']
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self.size = f['mapping'].attrs['size']
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self.grid = f['geometry'].attrs['grid']
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self.size = f['geometry'].attrs['size']
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r=re.compile('inc[0-9]+')
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self.increments = [{'inc': int(u[3:]),
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@ -77,6 +77,7 @@ program DAMASK_spectral
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use grid_mech_FEM
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use grid_damage_spectral
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use grid_thermal_spectral
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use HDF5_utilities
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use results
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implicit none
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@ -155,8 +156,6 @@ program DAMASK_spectral
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write(6,'(/,a)') ' Shanthraj et al., Handbook of Mechanics of Materials, 2019'
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write(6,'(a)') ' https://doi.org/10.1007/978-981-10-6855-3_80'
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call results_openJobFile()
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call results_closeJobFile()
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!--------------------------------------------------------------------------------------------------
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! initialize field solver information
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nActiveFields = 1
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@ -301,7 +300,7 @@ program DAMASK_spectral
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reportAndCheck: if (worldrank == 0) then
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write (loadcase_string, '(i6)' ) currentLoadCase
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write(6,'(1x,a,i6)') 'load case: ', currentLoadCase
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write(6,'(/,1x,a,i6)') 'load case: ', currentLoadCase
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if (.not. newLoadCase%followFormerTrajectory) write(6,'(2x,a)') 'drop guessing along trajectory'
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if (newLoadCase%deformation%myType == 'l') then
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do j = 1_pInt, 3_pInt
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@ -348,10 +347,10 @@ program DAMASK_spectral
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if (newLoadCase%time < 0.0_pReal) errorID = 834_pInt ! negative time increment
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write(6,'(2x,a,f12.6)') 'time: ', newLoadCase%time
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if (newLoadCase%incs < 1_pInt) errorID = 835_pInt ! non-positive incs count
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write(6,'(2x,a,i5)') 'increments: ', newLoadCase%incs
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write(6,'(2x,a,i5)') 'increments: ', newLoadCase%incs
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if (newLoadCase%outputfrequency < 1_pInt) errorID = 836_pInt ! non-positive result frequency
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write(6,'(2x,a,i5)') 'output frequency: ', newLoadCase%outputfrequency
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write(6,'(2x,a,i5,/)') 'restart frequency: ', newLoadCase%restartfrequency
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write(6,'(2x,a,i5)') 'output frequency: ', newLoadCase%outputfrequency
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write(6,'(2x,a,i5)') 'restart frequency: ', newLoadCase%restartfrequency
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if (errorID > 0_pInt) call IO_error(error_ID = errorID, ext_msg = loadcase_string) ! exit with error message
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endif reportAndCheck
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loadCases = [loadCases,newLoadCase] ! load case is ok, append it
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@ -359,8 +358,9 @@ program DAMASK_spectral
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close(fileUnit)
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call results_openJobFile
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call results_addAttribute('grid',grid,'mapping')
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call results_addAttribute('size',geomSize,'mapping')
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call HDF5_closeGroup(results_addGroup('geometry'))
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call results_addAttribute('grid',grid,'geometry')
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call results_addAttribute('size',geomSize,'geometry')
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call results_closeJobFile
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!--------------------------------------------------------------------------------------------------
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@ -66,9 +66,9 @@ subroutine results_init
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write(6,'(a)') ' https://doi.org/10.1007/s40192-018-0118-7'
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resultsFile = HDF5_openFile(trim(getSolverJobName())//'.hdf5','w',.true.)
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call HDF5_addAttribute(resultsFile,'DADF5-version',0.1)
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call HDF5_addAttribute(resultsFile,'DADF5-version',0.2)
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call HDF5_addAttribute(resultsFile,'DADF5-major',0)
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call HDF5_addAttribute(resultsFile,'DADF5-minor',1)
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call HDF5_addAttribute(resultsFile,'DADF5-minor',2)
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call HDF5_addAttribute(resultsFile,'DAMASK',DAMASKVERSION)
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call get_command(commandLine)
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call HDF5_addAttribute(resultsFile,'call',trim(commandLine))
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