Commit Graph

460 Commits

Author SHA1 Message Date
Philip Eisenlohr c46e639a38 fixed bug preventing first line to be read when using readArray without labels. 2015-07-09 03:40:15 +00:00
Yannick Naunheim 5fe65bfcc3 corrected OR models and set up simple test to check them 2015-06-29 16:02:56 +00:00
Martin Diehl 50bcfe6e0d possibility to give fixed seed to random orientation 2015-06-26 06:32:25 +00:00
Martin Diehl 6aaf074651 bug fix 2015-06-25 16:16:01 +00:00
Martin Diehl f10dfa311a fixed ORs 2015-06-25 12:00:08 +00:00
Philip Eisenlohr 2d8af638b0 added optional keyword `degrees´ to q.asEulers().
added methods inFZ, equivalentQuaternions, and equivalentOrientations to Orientation class.
general polishing…
2015-06-21 12:05:17 +00:00
Philip Eisenlohr 16edd1693d now only trying to close input and output tables.
corrected buggy behavior in case no columns found in data_readArray.
2015-06-19 06:08:09 +00:00
Philip Eisenlohr 83547ce29f condensed multiple import statements into general one at module start. 2015-06-15 15:36:58 +00:00
Philip Eisenlohr 66ce1d0b33 speed up for inversePole method. Now only performing symmetry equivalence when asked for SST. 2015-06-13 11:51:10 +00:00
Philip Eisenlohr 0efbd4b11f added Colormap.color(fraction) function to interpolate a color from the colormap.
cleaned Colormap.export by now relying on new interpolation function.
2015-06-13 11:46:32 +00:00
Philip Eisenlohr 3d7dfba40a syntax polishing 2015-06-13 11:43:34 +00:00
Martin Diehl d894900c2e added support for marc 2014:X 2015-06-11 18:19:52 +00:00
Philip Eisenlohr 48f31f13a6 label_index now transparently searches for “1_”+label if label itself not found.
added label_dimension method returning the dimension of the requested object, i.e. 1, 3, or 9 as typical outcomes.
2015-06-08 05:02:11 +00:00
Philip Eisenlohr 83d5686995 added check before trying to delete/dismiss file 2015-06-06 11:18:39 +00:00
Philip Eisenlohr a8d61a29d6 added newlines at end of colormap.exports 2015-06-06 11:09:15 +00:00
Philip Eisenlohr 5adbe74b10 changed library function name table.labels_index() to table.label_index() 2015-06-05 11:44:17 +00:00
Tias Maiti 9d5ca8b631 orientation matrix shape checked in “ fromMatrix “ function 2015-05-28 21:52:05 +00:00
Philip Eisenlohr 58eb4fc301 transparent (3,3) reshape of matrix when generating orientation. 2015-05-27 18:56:18 +00:00
Harsha Phukan c8d774f456 adopted math from Martin Baker to calculate quaternion from matrix representation. 2015-05-22 20:04:05 +00:00
Philip Eisenlohr 4bd44f8e43 better robustness against scalar arguments and “None”. 2015-05-21 21:53:54 +00:00
Philip Eisenlohr 99adf42f0f improved robustness of labels_index determination.
fixed errors in data_readArray and improved functionality. Can now cope with list of columns. reads all valid columns returning list of invalid ones. updates table.labels accordingly.
2015-05-21 00:02:32 +00:00
Philip Eisenlohr 06f017effa added possibility to dismiss (delete) output file upon closing an ASCIItable.
“None” labels are disregarded in labels_index() method.
2015-05-19 21:11:49 +00:00
Philip Eisenlohr 9f569d04c6 added “.close()” method to close input and output at the same time.
accept header only if space present between number and “head” string.
2015-05-19 20:35:56 +00:00
Martin Diehl 5d19e55eb4 corrected access by number 2015-05-15 13:35:50 +00:00
Martin Diehl b30eba3919 introduced (untested) OR calculation 2015-05-15 12:44:48 +00:00
Martin Diehl fa1368204d fixed bug in asciitable when updating labels for readArray, fixed checking for euler angels presence in tessellation, improved help 2015-05-14 17:07:50 +00:00
Martin Diehl b60f868a76 renumbering asciitable when readArray for selected columns only
test no longer for deleteColumn
2015-05-10 11:29:11 +00:00
Yannick Naunheim 88e16f9344 corrected Bain model 2015-05-08 14:45:59 +00:00
Yannick Naunheim 90ae536204 introduction of orientation-relationship (OR) models: Kurdjumov-Sachs (KS), Nishiyama and Wassermann (NW), Greninger-Troiano(GT), Bain 2015-05-08 14:14:44 +00:00
Martin Diehl 4448187c1e functions have been removed in previous commit 2015-05-05 14:44:31 +00:00
Martin Diehl 9694d63874 introduced option mute output to screen 2015-04-22 18:47:45 +00:00
Chen Zhang 43b665ba48 add getAverageOrientation() to Orientation class as class method. 2015-04-02 19:15:09 +00:00
Martin Diehl 32f9e7f9d8 now giving just a 'Remark' when h5py is not found 2015-04-01 14:43:34 +00:00
Tias Maiti f5801601d8 fixed UnboundLocalError (calling variable before assignment) in “inversePole” function 2015-03-29 19:16:45 +00:00
Tias Maiti 0e7325b27d added function — “inversePole” axis rotated according to orientation (using crystal symmetry to ensure location falls into SST) 2015-03-28 07:43:49 +00:00
Martin Diehl 151d4ff75b fixed bug (crash) in case (meaningless) strings found after part or section key.
DAMASK itself is fine with it, and it can be used for commenting.
thanks to B. Bode for figuring out
2015-03-27 16:23:21 +00:00
Martin Diehl 8a30021202 cleaned up core modul 2015-03-27 14:10:18 +00:00
Martin Diehl dd5055dc19 improved warning in case the core module is not found, corrected '/echo/' handling (had problems with key 'c/a' 2015-03-15 15:24:45 +00:00
Martin Diehl 89fa31b070 avoid troubles with /echo/ tag by considering it as a comment 2015-03-13 14:46:11 +00:00
Philip Eisenlohr 4c1e9c559b removed debug printing. 2015-03-06 15:13:18 +00:00
Philip Eisenlohr 3d86c9b363 corrected conversion of quaternion to AxisAngle and Euler angles. 2015-03-06 13:54:30 +00:00
Haiming Zhang 7818a8f467 Add codes about enforcing the boundary constraints for the fitting parameters, especially for the exponent term of non-quadratic yield functions. 2015-02-05 21:25:00 +00:00
Franz Roters 6cf9907cc9 added support for Marc2014 2014-10-22 07:43:06 +00:00
Martin Diehl 84df61d4a0 made license check tolerate non-existing licenses 2014-10-21 05:40:26 +00:00
Martin Diehl b7f078971b added background threading (might be used in more than one script) 2014-10-15 08:32:53 +00:00
Martin Diehl 8985a2d7e6 fixed wrong position when comparing tables 2014-10-09 15:37:35 +00:00
Martin Diehl 033a275d82 a bunch of small changes. deleted compiled FFTW libraries 2014-10-02 21:27:03 +00:00
Philip Eisenlohr 28a7c4c727 corrected (probable) bug in disorientation calculation. 2014-08-22 15:45:03 +00:00
Philip Eisenlohr d5e2e42f21 file handle closing can now be done from within class.
methods:
.input_close()
.output_close()
2014-08-22 15:37:46 +00:00
Martin Diehl a8ced53b59 fix for the fix. now both, single column and single line files are working 2014-08-07 08:51:25 +00:00
Martin Diehl 1402527f48 fixed nasty bug cause strange behavior for voronoi tessellation 2014-08-06 19:32:26 +00:00
Martin Diehl c8cd775747 added spectral solver grid location and index function to util library 2014-07-21 17:49:45 +00:00
Martin Diehl 28f3ba6841 fixed abaqus job submission 2014-06-25 08:32:33 +00:00
Martin Diehl 930cd0f3ac improved abaqus test structure 2014-06-24 15:32:42 +00:00
Martin Diehl 1333921ed5 improved logging 2014-06-18 09:03:48 +00:00
Martin Diehl 7d8934c9f6 made some more functions case insensitive 2014-06-17 08:53:37 +00:00
Martin Diehl eac0217b78 check for valid marc version 2014-06-17 07:29:05 +00:00
Martin Diehl 51b92f3ef9 simplified option parsing (so far, only for addCalculation and addMises) 2014-06-17 07:10:10 +00:00
Martin Diehl 488927a231 worked on phenopowerlaw test, made material.config writer case insensitive, polished lattice, removed deprecated part of documentation 2014-06-16 13:11:26 +00:00
Martin Diehl 25459823ee improved on test scripts to support individual parser options 2014-06-11 17:46:26 +00:00
Martin Diehl 07765da01a fixed typo 2014-06-07 08:36:43 +00:00
Martin Diehl f928d9406d replaced print output by logging class for better control over output (level, screen/file) 2014-06-04 15:34:35 +00:00
Martin Diehl 27ffa658b6 corrected use of variants 2014-06-03 17:19:56 +00:00
Martin Diehl 41b097bbc1 simplified updating 2014-06-03 13:09:52 +00:00
Martin Diehl 5321019457 updated some test related files as a preparation for a more intuitive automator 2014-06-03 10:30:51 +00:00
Martin Diehl 8493d6b414 now correctly detecting symbolic links for different marc versions 2014-05-16 06:21:50 +00:00
Martin Diehl 3d4ef650f3 simplified test scripts using msc.marc.
changed tolerance for hex test. was successfull for rev 3058, but now needs less strict tolerance, which seems to be related to the marc run script or the library, because with rev 3058 and current marc it has a slightly higher error
2014-05-09 11:29:35 +00:00
Martin Diehl 02edadfdeb fixed typo in marc class 2014-05-08 11:02:26 +00:00
Martin Diehl 6df66c6349 updated Marc run_damask scripts, linking against BLAS is done by Marc anyway, removed. renamed extension of original files from org to more explicit original 2014-05-07 14:29:53 +00:00
Martin Diehl 86cec35799 new test for Marc 2013.1 + small changes on marc solver class to run with intermediate release (20xx.1) 2014-04-14 16:18:08 +00:00
Martin Diehl 342ca0be47 tested new scripts to update shebang, all files got same shebang (and for python files encoding) 2014-04-01 18:41:14 +00:00
Martin Diehl 188002f16e more LF, Id, and executable status changes 2014-04-01 16:58:54 +00:00
Christoph Kords 3b20f1154e added macro releases 2013 and 2013.1 2014-03-07 09:22:04 +00:00
Philip Eisenlohr 6fd8407d6e moved "predefined" to colormap init
cleaned interpolate to not change color model

fixed color range cropping issue
2014-02-28 16:09:01 +00:00
Martin Diehl 3abe4699b7 fixed typo in output 2014-02-28 12:23:46 +00:00
Martin Diehl 3dee38433d fixed formatting 2014-02-27 18:08:37 +00:00
Philip Eisenlohr 4e5803fc36 forgot to clear readBuffer upon data_rewinding... 2014-02-06 16:37:45 +00:00
Martin Diehl bc4cc20c55 slightly polished makefile and numerics, recompile fftw with icc; still not running with ifort 14.01 2014-02-06 10:41:34 +00:00
Philip Eisenlohr ccb950f3d8 checked Unix command piping conformity -- seems to now work:
seeds_fromRandom |
geom_fromVoronoiTessellation |
geom_grainGrowth |
geom_unpack |
geom_pack

However, grainGrowth functionality seems broken...
2014-02-03 23:44:29 +00:00
Martin Diehl 83e4bc3247 updated test for restart, now also checking if number of increments is the same
fixed output of test class
fixed small bug? in asciitable.py, @philip: please check
2014-02-03 19:30:28 +00:00
Tias Maiti 521a9d2d81 changed STDOUT to STDERR for complaining about missing h5py. Please report any warnings or errors to STDERR since otherwise command piping breaks... 2014-01-29 20:16:31 +00:00
Christoph Kords de01c50d79 corrected format string in order to get meaningful error message 2014-01-29 12:54:18 +00:00
Martin Diehl a6dac1eceb fixed lib to use new config file 2014-01-24 13:15:01 +00:00
Martin Diehl d66b41c686 fixed installation, will test now 2014-01-24 12:30:27 +00:00
Philip Eisenlohr 033b979471 corrected __slots__ class variable 2014-01-17 01:37:01 +00:00
Philip Eisenlohr fdd4e224ce fixed integer type clash in Get_Unit function 2014-01-16 22:02:03 +00:00
Philip Eisenlohr 4d1d4fcf4a forgot to change obsolete property "pathInfo" to new name "options"... 2014-01-16 21:40:54 +00:00
Philip Eisenlohr c402d848f7 adopted "MSC_ROOT" instead of "msc" for pathinfo 2014-01-16 21:35:51 +00:00
Philip Eisenlohr 50b682db4c syntax polishing 2014-01-16 21:29:39 +00:00
Martin Diehl 278f854e41 introduced functionality to get output results by point from the HDF5 file 2014-01-15 22:17:32 +00:00
Martin Diehl cbc6f2a3af updated library for vtk output 2014-01-15 14:58:59 +00:00
Martin Diehl 01c8c434f7 finished work on the new installation scheme (if no bugs are found ;)) 2014-01-14 19:03:41 +00:00
Philip Eisenlohr ddc88d4cd6 added (I4P) to output integer type of Get_Unit function since plain integer resulted in compiler error (with ifort 14) 2014-01-13 16:52:06 +00:00
Martin Diehl aab0208c65 more modifications, only configure needs modifications 2014-01-12 17:29:00 +00:00
Martin Diehl 80da1c529e some more work on the consistent installation scheme, fixed bug in Makefile 2014-01-11 19:13:02 +00:00
Martin Diehl 22aa934a7d restructured results class, starting to write the unified damask result class 2014-01-09 21:35:21 +00:00
Franz Roters 543639bb8f added support for Marc/Mentat2013.1 2013-12-19 13:37:35 +00:00
Martin Diehl 676e621af2 new version of Lib_VTK_IO 2013-12-17 13:24:34 +00:00
Martin Diehl 2f1db8f69a introduced delimiter option (default = tab) for ascii table output, use space for geometry files 2013-12-17 08:16:29 +00:00
Philip Eisenlohr e20ffb379d changed numpy.readtxt logic from "data_asArray" returning a copy to inplace "data_readArray" now directly storing into self.data 2013-12-14 03:51:22 +00:00
Philip Eisenlohr 0e84db8f19 improved stability of xxx_append commands when dealing with iterable content 2013-12-12 02:36:05 +00:00
Philip Eisenlohr 9c7335f799 bug fix: wrong variable name "label" --> "labels" 2013-12-11 14:38:09 +00:00
Philip Eisenlohr 0e8fdaf59e changed exponent in IPF color mapping from 1/3 to 1/2 to get closer to TSL-OIM reference. 2013-12-09 18:57:38 +00:00
Philip Eisenlohr 24a4ca8ca8 "quack-like-a-duck" check for object properties.
sum equiv Quats don't need inverse option anymore.
fixed (severe) bug in IPFcolor determination.
2013-12-09 15:49:57 +00:00
Philip Eisenlohr c1b5b802ec fixed problem of adding strings in "data_append" resulting in infinite recursion.
more gracefully check for problems.
numpy.loadtxt now correctly transposes single column of data.
2013-12-09 15:45:18 +00:00
Philip Eisenlohr d17d6636df substantial rewrite of former package. now includes dedicated orientation and (associated) symmetry class. should be easier to handle...
new or improved methods:
- disorientation (between two orientations)
- IPFcolor: TSL color of inverse pole figure for given axis
2013-11-25 19:04:39 +00:00
Philip Eisenlohr 05fa8bf580 make data_append() coping with any iterable data type (not just list) 2013-11-25 18:58:27 +00:00
Martin Diehl 9ac8846e41 compiling with hdf5 is now working for DAMASK (if HDF5=ON) and for playground example in private 2013-11-07 12:52:36 +00:00
Philip Eisenlohr c496288144 make "orientation" module part of damask python interface 2013-10-08 13:56:28 +00:00
Philip Eisenlohr ec6440f1f4 when adding labels now making sure that they get processed during output writing 2013-10-08 13:54:13 +00:00
Philip Eisenlohr a2169e338f fixed type-casting problems (mainly with Lib_VTK_IO) 2013-09-26 17:21:46 +00:00
Martin Diehl 9f39405adf fixed material.config of elastic tests to run with new error, currently to strict, needs fix
removed long spectral example test from list of daily tests
2013-09-20 16:23:52 +00:00
Martin Diehl a0f304021f fixed restarting for Polarisation and AL, updated corresponding test and polished output in python (some statements are screwed up when making them Python3 compatible) 2013-09-20 14:22:37 +00:00
Martin Diehl 415892b8e7 did some conversion needed for use with python 3 2013-09-18 19:31:27 +00:00
Martin Diehl 59ba41e9e7 forgot this in last commit
Important: Do not update only the code dir, also the lib dir
2013-09-18 14:14:39 +00:00
Martin Diehl 3eb8aa1362 checked for python3 compatibility:
use "print('foo')" instead of "print 'foo'"
and "except(error) as e" instead of "except error,e"
2013-09-14 10:52:02 +00:00
Martin Diehl 3bb5a5e7b5 line too long in DAMASK_spectral_solverPolarisation.f90, reordered curl calculation for clearer look, fixed test for Marc 2013 2013-08-08 18:10:58 +00:00
Martin Diehl 4cb6c0a706 added support for MSC.Marc>2013 to tools (execution with option for optimization (h/l/-) and OpenMP (True/False)
added test for MSC.Marc2013
removed automated test run for MSC.Marc 2010, hast to run on a different machine and is deprecated anyway
2013-08-08 09:12:44 +00:00
Martin Diehl cc6c524740 updated test for spectral solver example and example files. changed marc job submission such that the marc version number is no longer expected at the end of the subroutine file 2013-08-06 09:48:57 +00:00
Franz Roters f896b4a01e updated Marc/Mentat integration once more to minimze interference with original instal
added support for Marc2013, which is now default in apply_DAMASK_modifications
2013-07-24 08:41:58 +00:00
Philip Eisenlohr 9abc9a99fc added possibility to
* read ASCIItable not having labels
* write numpy array as data
2013-06-30 00:21:51 +00:00
Christoph Kords fab0ea8e4e interpolation method is now an attribute of the Colormap class; added classic "rainbow" colorscheme to predefined ones 2013-05-28 20:15:13 +00:00
Christoph Kords 65c5090378 added option to linearly interpolate colors to Colormap class 2013-05-28 17:33:51 +00:00
Christoph Kords 2784a96a51 do not print colormap name for format=raw 2013-05-28 14:45:53 +00:00
Christoph Kords 7c42facfe0 predefined colormaps now as class attribute of "Colormap" 2013-05-28 14:04:25 +00:00
Christoph Kords ee2595c008 added method to use predefined colormaps 2013-05-28 13:50:36 +00:00
Christoph Kords 4fda285e08 added method to invert colormap 2013-05-28 12:18:25 +00:00
Christoph Kords d01a8bdf8c renamed methods "to" and "asModel" to more (?) meaningfull "convertTo" and "expressAs" 2013-05-28 11:47:15 +00:00
Christoph Kords 8421587724 added some space here and there for more readability 2013-05-28 11:39:26 +00:00
David Mercier 190a59b707 set Lib_VTK_IO-master.zip and related files back to initial version, new version is not working with MSC.Marc 2010 2013-05-15 16:43:18 +00:00
Martin Diehl b83b557af2 updated Lib_VTK_IO again. Contains small bug fix ans support for Base64 encoding 2013-05-10 12:57:00 +00:00
Martin Diehl cfac73043d some lines in crystallite.f90 exceeded limit of 132 characters
fixed bug in Lib_VTK_IO.f90 (informed author as well)
added zip file containing source of Lib_VTK_IO.f90
2013-05-08 17:48:00 +00:00
Martin Diehl 755e0e2440 vtk files are now correctly written to current working directory.
updated Lib_VTK_IO.f90
2013-05-08 16:10:21 +00:00
Martin Diehl 3f9d642d87 corrected error message when complaining about uncompiled core module 2013-04-29 16:30:08 +00:00
Martin Diehl 8da7544978 marc doesn't need error prone setup_code any more, moved Marc includes from code/include to lib/includeMarc
DAMASK_marcXXXX.f90 now is not a copy any more but contains one definition and an include statement

setup_code of spectral solver is now replaced by the standard 1) configure 2) make 3) make install
2013-04-22 14:41:33 +00:00
Martin Diehl d751283b4a updated fftw to 3.3.3 (from 3.3.2) 2013-04-16 16:38:54 +00:00
Martin Diehl ee22a2698b added library to write out vtk file from Fortran (Lib_VTK_IO) 2013-04-16 10:20:22 +00:00
Martin Diehl aee8196b32 example test for Abaqus now takes files from examples folder, both Abaqus test take now *.env from installation/mods_abaqus 2013-03-26 12:06:19 +00:00
Mahesh Balasubramaniam 7fd1dca4f5 corrected a little mistake on line 145 that sets the maximum value of XYZ values to be 1.0 2013-03-25 20:18:30 +00:00
Martin Diehl cb8a7e7d25 new function to compare tables both located in current directory 2013-03-19 15:46:07 +00:00
Martin Diehl 43ec1d2051 added output of perceptual unfiform colormaps to GOM (DIC Aramis) format, deleted some old files in the documentation folder 2013-03-19 15:19:46 +00:00
Martin Diehl 3660b2a245 added functionality to check for available licenses to damask/environment.py, now using this functionality + a check for the correct version before starting Abaqus6.12.2_compileIfort/run_test.py and Abaqus6.12.2_example/run_test.py 2013-03-04 19:39:13 +00:00
Martin Diehl b94caae041 added missing import of os 2013-02-19 15:57:51 +00:00
Philip Eisenlohr d8da2f60d8 added core module function math_periodicNearestNeighborDistances 2013-02-19 14:56:26 +00:00
Philip Eisenlohr 0047c32411 dropped ./fftw in favor of /usr/local as FFTW default install path 2013-02-19 13:35:38 +00:00
Philip Eisenlohr 9d32e51da8 more verbose explanations 2013-02-15 08:38:58 +00:00
Philip Eisenlohr fc9ecc7ed5 fixed bugs in HSL2RGB and the two CIE conversions.
streamlined interpolation.
2013-02-02 20:17:02 +00:00
Philip Eisenlohr 95c74961dd polished syntax here and there. 2013-02-02 15:11:55 +00:00
Martin Diehl b0263a8aab added possibility to parse options for setup_code.sh and setup_processing.sh + other improvements in setup functionality 2013-02-01 12:21:56 +00:00
Philip Eisenlohr 0dabe29657 ignore problems when importing (outdated) core module during its rebuilding. 2013-02-01 11:45:20 +00:00
Philip Eisenlohr 20060b4275 added pathInfo parsing of $shellVariables. These are now interpreted as absolute path (used to be wrongly considered relative...) 2013-02-01 11:30:57 +00:00
Martin Diehl e74b5da19a changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
Martin Diehl 96577b18fb introduced error code for run_test.py 2013-01-23 18:33:46 +00:00
Mahesh Balasubramaniam a1f0ed483c export method with format and revised crop options added to the Colormap class. 2013-01-18 17:17:50 +00:00
Martin Diehl b018934b45 simplified code, added functionality to export raw list 2013-01-16 18:45:10 +00:00
Mahesh Balasubramaniam 7ac7d1a657 new tool for creation of colormaps, now using proper classes 2013-01-15 18:24:10 +00:00
Martin Diehl 0d4db957f8 started to rearrange testing folder 2013-01-14 15:20:17 +00:00
Martin Diehl fd0e096256 rewrote colormaps to use classes 2013-01-08 18:47:44 +00:00
Mahesh Balasubramaniam 820b8eb2c1 put colormap related functions into library, renamed and added scripts for creation of colormaps 2013-01-04 13:57:36 +00:00
Martin Diehl e3970ce152 added detection of Marc 2012 in postResults (lib/damask/solver/marc.py)
added test for Marc 2012 and updated old tests from 2010 to 2012
2012-12-13 17:50:00 +00:00
Martin Diehl 7848e933bb wrong file was selected during last commit 2012-12-12 17:10:04 +00:00
Philip Eisenlohr dc746119e3 introduced two more helper functions:
- labels_index
- data_asArray
2012-12-06 21:46:19 +00:00
Martin Diehl 549ea3c1e6 updated restart test to use the new table comparison facilities and check the new basic solver (part 1, there is some problem with renaming) 2012-11-23 17:21:18 +00:00
Martin Diehl 11ed7fab86 corrected bug in curl calculation causing the output of transposed tensor (according to information stored in testing/9102/proof/Curl of Tensor - Physics Forums.pdf)
addCurl test is now done against analytical solution and working, added it to list of automated tests.
small improvements on test.py
2012-11-23 15:16:51 +00:00
Martin Diehl 565713fecb improve functionality to compare ASCII tables 2012-11-22 18:01:51 +00:00
Martin Diehl a40b73dc72 for array comparison, only values are taken into consideration that are non zero in array 1 AND array 2 2012-11-21 15:37:59 +00:00
Martin Diehl 78aa010565 now just comparing substring to figure out if setup_processing was importing the core module 2012-10-25 12:40:06 +00:00
Martin Diehl 868984cb89 import of damask.core will not complain any more if done in setup_processing.py, however setup_processing.py will check if core.so exist after compilation and delete it before compilation 2012-10-25 07:55:27 +00:00
Martin Diehl 398643a3b1 made exception in case of non-working f2py code (core.so) again verbose 2012-10-10 16:38:02 +00:00
Martin Diehl 7ad3ce62e7 added hint if test don't support update 2012-10-09 07:37:48 +00:00
Claudio Zambaldi 1585fbe927 improved material.config writer class
includes example of usage
should replace material.py, after the tests 
have been confirmed to work with it

mat=damask.Material()
m=mat.example_1()
m.write(file='material.config_<descriptive-label>')
2012-09-07 18:25:25 +00:00
Martin Diehl 96ba5ecae4 moved some more 'mesh related' functions for post processing from math.f90 to mesh.f90
f2py functions remaining in math.f90 now uses assumed size arrays in order to have simpler interfaces. This is only working with python 2.7!
changed python pre- and postprocessing scripts.
If you encounter any problems whith core modules, try to remove the old core.so in the lib/damask
2012-08-27 08:04:47 +00:00
Mahesh Balasubramaniam 87bec7eafa added test to check if lab-to-load rotation is done properly, small improvement on test.py 2012-08-14 13:23:50 +00:00
Martin Diehl ee1bde0cd7 enabling regridding more than once by introducing deallocation of arrays
added J2 test (stub from Taymour)
2012-07-31 15:37:49 +00:00
Martin Diehl 8a64be7d1b added restart-test to list of automated tests, improved reporting of tests 2012-07-26 07:47:31 +00:00
Claudio Zambaldi 9078d70af0 polishing, and using numpy's deg2rad/rad2deg 2012-07-19 16:05:05 +00:00
Claudio Zambaldi b2a7f85101 __init__ of damask package not crashing in python 2.5 if core module not available
added some Matlab-like utility functions (damask.sind, cosd, tand, acosd, ...)  that take and return degree instead of radians
2012-07-18 13:46:33 +00:00
Martin Diehl 95d292b286 2012-07-18 12:31:07 +00:00
Martin Diehl 3cb1d7e31f replaced FFTW libs with new version 3.3.2 2012-07-17 13:27:51 +00:00
Martin Diehl fe3b537851 added some useful functions for copying and comparison and renamed some functions in the lib file; changed the tests accordingly 2012-07-17 13:04:57 +00:00
Martin Diehl 7847816044 changed back to previous (working) version 2012-07-05 20:27:05 +00:00
Mahesh Balasubramaniam ca83c6082a 2012-07-05 11:21:06 +00:00
Philip Eisenlohr 9490c8a3c1 corrected to consistent naming: "IMKL" finally ;-) 2012-07-03 12:59:19 +00:00
Philip Eisenlohr bf4d47266e corrected to consistent naming: "IMKL"
changed dummy entry for FFTW to usr/local
2012-07-03 12:41:29 +00:00
Martin Diehl b2fd3e1180 introduced preprocessor identifiers Marc, Abaqus, and Spectral to enable conditional compilation. This allows deleted dummy functions that are used by one solver only.
Mainly affected modules are IO and mesh. Most of the changes in mesh result from reordering the functions when grouping them depending on their solver.
Further advantage is that FE solver do not need FFTW and kdtree2 anymore. The include files for these two libraries moved to DAMASKROO/lib now as I figured out how to use a include path in the Makefile.
Put all the files I got when testing compilation with abaqus in a folder which to become the abaqus compilation test.
2012-06-15 16:10:21 +00:00
Martin Diehl e18a6f6c7f again small adjustments for the automatic testing 2012-05-29 09:59:04 +00:00
Martin Diehl 34777e3df8 some smaller improvements on the intel compilation test 2012-05-25 15:11:00 +00:00
Taymor El Achkar be355c8f40 updated reference result for compile test
added dislotwin law to hex elastic test and drastically increased loading time. still the question why Young's modulo is increasing.

added possibility to add crystallite microstructure in material.py
2012-05-24 16:00:32 +00:00
Martin Diehl 77c066d0a8 corrected error handling to work with older python versions 2012-05-10 09:38:55 +00:00
Martin Diehl 331ef7ad68 made init of python module more verbose in case core modules cannot be loaded 2012-05-03 19:00:34 +00:00
Martin Diehl 31753be16f updated setup/setup_processing.py with new files
added data_readLine(LINE) and data_skipLines(LINES) for ascii table
2012-04-18 11:42:57 +00:00
Martin Diehl efd653fb00 removed old *.output* and *.spectralOut as they are not updated anyway from reference.
introduced a numbering scheme for variants
calculated new reference results due to slight changes
2012-03-09 16:30:42 +00:00
Martin Diehl 3f1c16e079 removed headerLen completely, use len(self.info)+1 instead 2012-03-09 14:18:48 +00:00
Martin Diehl ee6b1eb22c elastic phenopowerlaw for hex crystals is working, results are close to analytic ones but there is a small "elastic hardening" and the values are a little bit higher than the ones calculated with mtex 2012-02-24 14:34:44 +00:00
Martin Diehl 7ce583405f made copy_Current2Current and copy_Current2Current in testclass more verbose, added numerics with fixed seed to compile test to get always exactly the same results 2012-02-23 17:44:09 +00:00
Philip Eisenlohr 6b8bebad49 removed unused headerLen property. added info_clear() method 2012-02-23 13:54:38 +00:00
Martin Diehl a8f4fc76b3 made results better visible 2012-02-23 09:23:37 +00:00
Philip Eisenlohr 58fdf4ebfc improved STDOUT | STDIN constructs -- no more broken pipe left-overs (I hope) 2012-02-16 18:42:04 +00:00
Philip Eisenlohr c24f258eba now works with piped STDOUT | STDIN constructs. 2012-02-16 18:03:14 +00:00
Philip Eisenlohr ae8ec80dd0 croaking about missing core module now goes to STDERR (formerly this influenced piped STDOUT detrimentally...) 2012-02-16 18:02:15 +00:00
Martin Diehl 4c59015a78 further simplified creation of tests by moving the option parsing to the general test class 2012-02-15 20:54:14 +00:00
Philip Eisenlohr d642730776 added method to set data value in given column (by name) 2012-02-15 14:50:51 +00:00
Philip Eisenlohr 8671b8ed38 script to delete existing columns from ASCIItable 2012-02-14 12:04:37 +00:00
Martin Diehl 7960600dbe improved updating of reference results 2012-02-09 14:41:18 +00:00
Philip Eisenlohr a3e47b2d65 added method to return data as list of floats.
safer check whether ASCII file has ended.
2012-02-02 17:13:51 +00:00
Claudio Zambaldi 7dd67e3ebb improved creation of material.config files, mostly done by Philip 2012-02-01 19:44:36 +00:00
Martin Diehl e87296b10a added debug output for tests, corrected bug reporting number of successful tests 2012-01-31 13:10:14 +00:00
Martin Diehl 2a89d9b81a simplified compilation testing by introducing some small helper functions for common tasks, continued to rename 2012-01-27 09:55:19 +00:00
Martin Diehl 20a775e8d1 small improvements (more output to screen) 2012-01-26 15:26:21 +00:00
Martin Diehl becb863110 added test for gfortran and gfortran vs intel, renamed intel test to new numbering scheme and changed to new div criterion
introduced "try" statement in lib/damask/test/test.py to avoid crash if a test variant fails
2012-01-25 15:14:31 +00:00
Claudio Zambaldi 2b8e0b27fc a rough version of a t16 to vtk converter
needs polishing to be used with damask python package
paraview plotting is useful if you want semi-transparent iso-surfaces
2012-01-24 14:26:13 +00:00
Philip Eisenlohr 3c87d20353 added capability to rewind to beginning of data 2012-01-19 20:37:53 +00:00
Philip Eisenlohr 4eb754b1fb added release '2011'.
added toolsPath() method.
added optional release hinting for path determinations.

streamlined submit_job method.
2012-01-18 09:41:10 +00:00
Philip Eisenlohr 0b4b154abb reworked class definition.
now follows workflow of
1. clean
2. prepare
3. run
4. postprocess
5. compare/update

added file-structural helper functions.
2012-01-18 09:34:49 +00:00
Philip Eisenlohr aba4703463 added property "headerLen" 2012-01-18 09:30:50 +00:00
Christoph Kords 7f94b3f267 subroutine path was not correct 2012-01-17 09:28:52 +00:00
Christoph Kords 684cac1206 corrected typo 2012-01-17 08:44:57 +00:00
Philip Eisenlohr 48729ff2e1 modified testing class to use generic "damask" module.
removed obsolete individual class definitions.
2012-01-16 15:18:43 +00:00
Martin Diehl dd1e968908 setup_processing.py uses damask module but builds the core part of it, therefore made the use damask.core optional by setting a try statement in __init__.py and a "from damask import xxx" 2012-01-04 11:06:24 +00:00
Philip Eisenlohr 35bd460e39 added "core" package capability to processing
(renamed former f2py modules)

reverted pathinfo...
2011-12-22 10:36:59 +00:00
Philip Eisenlohr 429af90ccb added Id flag and content
added "core" package capability
2011-12-22 10:30:25 +00:00
Krishna Komerla f463c2da70 added addCurl.py, not sure if it works correctly. still in old (eq. to addDivergence.py) style 2011-12-21 17:25:31 +00:00
Philip Eisenlohr 06cb99d156 restructured location of FFTW libs 2011-12-21 13:09:55 +00:00
Philip Eisenlohr 8be14ef72e now aware of blank and comment lines in pathinfo 2011-12-20 10:55:47 +00:00
Philip Eisenlohr c5d64df287 example for new syntax and options. 2011-12-20 10:20:42 +00:00
Christoph Kords 2bfbb97c11 import of re module was missing 2011-12-18 15:49:44 +00:00
Philip Eisenlohr d96c64373c added option to have blank pathInfo (to switch off ACML for example) 2011-12-15 22:21:44 +00:00
Claudio Zambaldi fbfb39de3f removing 2 bugs from previous commit 2011-12-15 15:29:22 +00:00
Claudio Zambaldi a27a78bab1 changed per Philips suggestion
config folder will later contain debug.py and numerics.py
2011-12-15 15:15:32 +00:00
Claudio Zambaldi 0eb51046a4 worked on integrating using damask package in test
renamed config to material/material.py to make it more consitent
2011-12-15 14:53:10 +00:00
Philip Eisenlohr 2fcbc1ff13 started solver sub package
improved guessing of DAMASK_ROOT
2011-12-15 08:51:16 +00:00
Philip Eisenlohr 4faded6297 started DAMASK Python package... 2011-12-13 20:02:26 +00:00
Martin Diehl 031a00237f improved makefile, no directly linking to files of acml
corrected default pathinfo
improved test for intel compiler
2011-12-09 16:34:53 +00:00
Martin Diehl 7d1d2b6229 corrected small mistake in setup_code and makefile
test no. 1500, spectral compile test with intel compiler is now working. adjusted run_test and tamask_test
2011-12-09 15:13:27 +00:00
Philip Eisenlohr 2ceb78c337 introduced new damask_tools method "relPath" and adopted it in setup_processing.py and setup_code.py 2011-12-06 18:38:03 +00:00
Martin Diehl b752becbea added functions in DAMASK_TOOLS to get pathInfo, root and bin directory 2011-12-05 13:05:42 +00:00
Claudio Zambaldi 81e9607316 tests which define variants in test_variants() generator can be handled 2011-11-23 18:32:22 +00:00
Claudio Zambaldi 99b7dcf7b5 polishing and changed to comply with PEP 8 style guide 2011-11-23 15:42:18 +00:00
Claudio Zambaldi 205bb49b34 now all methods use generic add_data
added change_value method
2011-11-23 15:21:16 +00:00
Philip Eisenlohr 21bcfc2986 added class ASCII_TABLE for easier processing of those... 2011-11-23 14:54:05 +00:00
Philip Eisenlohr e8f5996a96 renamed MSC_TOOLS.library_paths to libraryPath, since only single string is returned 2011-11-23 08:25:52 +00:00
Martin Diehl 5a1e73b53d added set_timelimit functionality to fortran-wrapper of FFTW and introcudec it to DAMASK_spectral.f90 2011-11-21 18:48:38 +00:00
Claudio Zambaldi b67b5f9ef9 improvements! 2011-11-21 18:01:08 +00:00
Claudio Zambaldi ddc2b04661 material_config reads and writes files, adds or changes existing parts; still needs some polishing... 2011-11-21 16:40:23 +00:00
Philip Eisenlohr 3c7ebc7a30 introduced material.config parsing and self representation, i.e. printing of class object. 2011-11-18 19:59:20 +00:00
Claudio Zambaldi cf8b60986e response to Philip's comments. Interesting, chat via SVN :) 2011-11-17 21:19:08 +00:00
Philip Eisenlohr ac8b5f0708 added short comment for discussion... 2011-11-17 18:39:09 +00:00
Claudio Zambaldi ae73172ba7 python syntax 2011-11-17 16:17:56 +00:00
Martin Diehl ddb68eee7c new module damask_test, set compile=false as default in msc_tools, added first draft of material.config generator to damask_tools 2011-11-17 14:05:39 +00:00
Claudio Zambaldi 795e3d070b polishing on test 2000_hex_elastic
postprocessing commands are refactored out into file postprocessing.cmd, one command per line
2011-11-10 10:42:59 +00:00