Commit Graph

2462 Commits

Author SHA1 Message Date
Martin Diehl b0bb904c89 no multiprocessing for adding datasets
multiprocessing was not reliable on different platform and caused all
kinds of weird behavior
2023-09-22 08:36:34 +02:00
Philip Eisenlohr 23c6270d4a added examples 2023-09-21 17:27:38 -04:00
Philip Eisenlohr 108ef2a954 reflect updated shape blending 2023-09-19 18:05:12 -04:00
Philip Eisenlohr 4c4c1fbcc8 small polish 2023-09-19 18:03:55 -04:00
Philip Eisenlohr 0704f1122e result (and object interpretation) "flows" from rotation and data shapes 2023-09-19 17:50:28 -04:00
Philip Eisenlohr b3f98ab877 more flexible shapeblending 2023-09-19 17:43:27 -04:00
Philip Eisenlohr a2b571c1fc corrected sign definition of <111>{110} slip systems
Breaking change: Sign of shear differs
2023-09-15 00:21:04 +02:00
Martin Diehl 9b0a051737 standardized citation 2023-09-01 13:05:28 +02:00
Philip Eisenlohr 96137f6768 use 30% faster algorithm 2023-08-31 15:29:48 -04:00
Philip Eisenlohr 0cda7af7ed Merge branch 'documenting-symmetry' into 'development'
document source of symmetry operations

See merge request damask/DAMASK!803
2023-08-28 12:50:10 +00:00
Martin Diehl ea8359ddc8 Merge branch 'compose-broadcasted-rotations' into 'development'
Numpy-intrinsic broadcasting for "outer" rotation compositions

See merge request damask/DAMASK!804
2023-08-28 12:49:45 +00:00
Philip Eisenlohr 0393bdb214 added broadcasting test for composite rotations 2023-08-17 21:21:16 +00:00
Philip Eisenlohr fb2d49741a self.shape does not equal broadcastable shape 2023-08-17 21:10:26 +00:00
Martin Diehl e944ece5ec document source of symmetry operations 2023-08-17 14:41:46 +02:00
Martin Diehl cc8790908c there is no "crystal lattice", what we define are the 14 Bravais
lattices
2023-08-16 22:01:20 +02:00
Philip Eisenlohr 81d0002a49 corrected remaining instances of phenopowerlaw configuration 2023-08-05 11:50:03 -04:00
Franz Roters d8a1d28797 actually use new version 2023-07-24 17:06:07 +02:00
Vitesh Shah 2729e3f4a0 complying with yaml standards 2023-07-05 15:21:39 +02:00
Vitesh Shah e4b793cf77 Merge branch 'development' into export_DAMASK_to_DREAM3D 2023-07-05 15:04:08 +02:00
Yi Hu 09858317d8 add m=0 (default) case in docstring 2023-07-04 16:44:31 +02:00
Yi Hu 0e9e37bfb3 Merge branch 'development' into 284-more-friendly-output-name-of-add_strain-or-a-better-presentation-in-documentation-webpage 2023-07-04 16:07:48 +02:00
Daniel Otto de Mentock b9062c9425 github actions has issues with interpretation of function calls inside assert statements 2023-06-26 14:00:01 +02:00
Martin Diehl 137c4e3b03 easier to understand 2023-06-12 20:38:14 +02:00
Martin Diehl 1a4c171109 checking correctness of displacements for 1D strain 2023-06-06 19:25:44 +02:00
Martin Diehl 898aaf1068 shortened 2023-06-04 23:46:35 +02:00
Martin Diehl 11c4be008f analytic solution for displacement calculation 2023-06-04 22:54:31 +02:00
Martin Diehl d64b64ed05 bugfix: fluct displacement were wrongly scaled 2023-06-04 22:20:44 +02:00
Martin Diehl 5b8194d8eb Merge remote-tracking branch 'origin/development' into 256-grid-geometry-displacement-reconstruction 2023-06-04 14:26:31 +02:00
Martin Diehl cfdf33e4b1 don't change Neper material ID definition
Neper material ID start at 0 if a buffer layer is added
(run "neper -T -n 100 -tesrsize 320:320:320 -domain "cylinder(20,10)"  -format vtk"),
otherwise at 1.

Hence, leave the IDs untouched and let the user change the
numbering (either by a constant offset or by re-numbering): "explicit is better than implicit"
2023-05-22 17:32:39 +02:00
Vitesh Shah 2c6e8a56d0 remove unnecessary modules 2023-05-04 13:39:07 +02:00
Vitesh Shah 7ec3d1da8a fixing invalid yaml
Strange that material.yaml made by ConfigMaterial class is creating
problems
2023-05-04 13:36:33 +02:00
Vitesh Shah b5b6c2d695 fixed typos and other python warnings 2023-05-04 12:59:56 +02:00
Vitesh Shah 8de19f0c3b better checks for values 2023-05-04 11:03:19 +02:00
Vitesh Shah c4baca0cb6 fixed typo 2023-05-04 10:49:11 +02:00
Philip Eisenlohr 4eb5577652 Merge branch '254-testing-resources-folder-name' into 'development'
more reasonable name

Closes #254

See merge request damask/DAMASK!758
2023-05-01 12:35:56 +00:00
Vitesh Shah 9193085913 added more reference files 2023-04-28 13:11:18 +02:00
Vitesh Shah 767ba5a421 test for export_DREAM3D 2023-04-26 13:01:18 +02:00
Vitesh Shah 3462d41d8e consistent dataset naming eases testing 2023-04-26 12:56:34 +02:00
Vitesh Shah 45cebe3aee better variable naming and splitext 2023-04-26 10:28:17 +02:00
Martin Diehl f36a175867 binary VTK file
does not need EOL@EOF
2023-04-24 07:17:34 +02:00
Martin Diehl 17ce0b9aec more reasonable name
folder contains all test resources, not just reference results
2023-04-24 07:16:45 +02:00
Vitesh Shah 66df416891 added input dream3D file for 2 phase microstructure 2023-04-21 12:18:43 +02:00
Martin Diehl 62eda982fd drop support for older DADF5 versions
simplifies code a little and 0.14 was already used in alpha5
2023-04-20 19:32:23 +02:00
Vitesh Shah 5dddf792e1 pathlib can give name of the file directly 2023-04-20 10:52:08 +02:00
Vitesh Shah 029b830156 corrected the looping and target dir 2023-04-17 08:03:44 +02:00
Sharan Roongta 7b158f5ec4 Merge branch 'regrid-result' into 'development'
regrid/map when exporting DADF5

See merge request damask/DAMASK!748
2023-04-14 20:05:30 +00:00
Martin Diehl 29a968b3a8 support for pandas >= 2.0 2023-04-14 08:37:40 +02:00
Vitesh Shah 2ae1a20443 seems to read the data correctly 2023-04-06 21:42:34 +02:00
Vitesh Shah f619cf4ff2 making export DREAM3D compatible with results class 2023-04-06 20:56:42 +02:00
Martin Diehl 03768e14dc Grid loadcase 2023-03-27 17:33:11 +00:00
Martin Diehl d2e85ef15b regrid/map when exporting DADF5 2023-03-25 07:40:21 +01:00
Martin Diehl b11ad8c774 helpful information on strain calculation 2023-03-24 12:34:51 +01:00
Philip Eisenlohr 782a593bf2 separate import of vtk modules
vtk is a collection of modules. Some are missing in some installations, so it is recommended to import only the functionality that is needed.
2023-03-08 18:03:22 +00:00
Daniel Otto de Mentock ad39577ea4 improvements to docstrings (in `damask.Rotation`) 2023-03-02 18:46:00 +00:00
Philip Eisenlohr b15096c2f6 flexibility for non-standard ANG headers. 2023-02-28 15:35:31 +00:00
Sharan Roongta 95017b252f typo in example 2023-02-24 14:16:16 +01:00
Martin Diehl c40b446854 add keywords to signature of Orientation functions that inherit from Rotation 2023-02-23 18:49:08 +00:00
Philip Eisenlohr 06201da5e2 Improvements to Python docstrings 2023-02-21 15:27:06 +00:00
Philip Eisenlohr 71e383bfc8 test for ValueError 2023-02-20 14:44:40 -05:00
Philip Eisenlohr 6aa566760f shorter calculation of Seth–Hill strains 2023-02-20 14:42:31 -05:00
Philip Eisenlohr a335e2db6d Merge branch 'fix-ravel-docstring' into 'development'
sphinx does not handle white spaces properly

See merge request damask/DAMASK!727
2023-02-18 03:26:50 +00:00
Daniel Otto de Mentock 6fd30dd266 Merge branch 'extra-documentation' into 'development'
improved docstrings

See merge request damask/DAMASK!722
2023-02-17 12:58:09 +00:00
Philip Eisenlohr 4485e1045c proper indication of transpose; polish 2023-02-16 15:12:10 -05:00
Martin Diehl e501e76d84 sphinx does not handle white spaces properly 2023-02-16 19:40:09 +01:00
Martin Diehl eefa2c29a2 more details 2023-02-16 19:32:15 +01:00
Philip Eisenlohr 61f2ae295b switch to physics macros 2023-02-16 11:59:19 -05:00
Martin Diehl 66b0b2e9dc using latex to improve documentation 2023-02-14 17:11:52 +01:00
Martin Diehl 4cd84ab8ce return was missing 2023-02-14 12:54:51 +01:00
Martin Diehl 24ebc465c4 should not be in here
https://stackoverflow.com/questions/58521386
2023-02-12 09:20:46 +01:00
Daniel Otto de Mentock 4ae3274ac4 Merge branch '250-configmaterial-material_add-simplifications' into 'development'
several improvements to ConfigMaterial and Config

Closes #250

See merge request damask/DAMASK!714
2023-02-06 16:52:14 +00:00
Martin Diehl f401c51e22 update to DADF5 v1.0 2023-02-04 15:22:39 +01:00
Martin Diehl 12d1e9be65 pipeline was failing with decode error
I could not reproduce it, maybe this helps
2023-02-04 12:42:56 +01:00
Martin Diehl b818ec6885 include more files 2023-02-04 11:47:54 +01:00
Martin Diehl 29933a6618 includes unit of 'O', which was corrected 2023-02-04 11:44:12 +01:00
Martin Diehl e49090b26b update to DADF5 v1.0 2023-02-04 11:14:03 +01:00
Martin Diehl 89817d1bc1 not needed 2023-02-04 11:09:27 +01:00
Martin Diehl 780fc8a050 new/correct unit for quaternions 2023-02-04 10:23:01 +01:00
Martin Diehl 42495942b1 updated to DADF5 v1.0 2023-02-04 10:22:19 +01:00
Martin Diehl a45a86cfbf mark DADF5 file layout as stable 2023-02-04 09:55:23 +01:00
Martin Diehl 7420c779d7 checking for invalid volume fractions 2023-02-02 22:13:17 +01:00
Martin Diehl aa11e1aca3 easier to understand 2023-02-02 08:59:44 +01:00
Martin Diehl 6682f58f86 explicit arguments to guide the user 2023-02-02 08:38:50 +01:00
Martin Diehl 008d3cca6f limits hold for sum and individual 2023-02-02 08:35:46 +01:00
Martin Diehl 46ad436d76 check for invalid materialpoint configuration 2023-02-01 22:48:43 +01:00
Martin Diehl fd84406903 guide the user with explicit keywords 2023-02-01 15:03:30 +01:00
Martin Diehl 8895e7a36f more logical behavior
explicit keywords are more important than existing one
2023-02-01 14:59:00 +01:00
Martin Diehl ce6c86dd6d essentially same behavior as before,
but better documentation, a few simplifications, and typehints
2023-01-24 11:26:14 +01:00
Philip Eisenlohr 5edd001d4c Option to normalize rotation matrix 2023-01-16 23:53:49 +00:00
Daniel Otto de Mentock 1b8f3292f0 test was not using parametrized values 2023-01-16 11:45:09 +01:00
Martin Diehl 907b01e9f3 simple test setup 2023-01-15 13:45:39 +01:00
Sharan Roongta 214ee7b2f8 Merge branch 'material_add-no-kwargs' into 'development'
kwargs flexibility not needed

See merge request damask/DAMASK!694
2023-01-09 11:27:14 +00:00
Martin Diehl 93e05aed29 should always point to the most recent version 2023-01-08 20:46:07 +01:00
Martin Diehl cdaddf8e6f kwargs flexibility not needed
the number of supported entries is rather limited, so guide the user
using explicit arguments
2023-01-07 14:32:05 +01:00
Martin Diehl e658f3126b guide choice of strain measure that makes sense 2022-12-29 20:29:13 +01:00
Philip Eisenlohr 5d2d611898 Merge branch '238-tail_repack-behavior-and-use' into 'development'
simplifications of Python code

Closes #238

See merge request damask/DAMASK!684
2022-12-13 18:32:19 +00:00
Martin Diehl dcdc4acbd5 Unified object.comments as list[str]; simplifications of Python code 2022-12-13 18:32:19 +00:00
Martin Diehl 0e48f04d0f consistent naming 2022-12-11 16:09:54 +01:00
Daniel Otto de Mentock e03ad0db11 Improving grid.vicinity_offset performance optionally with numba 2022-12-10 07:22:22 +00:00
Daniel Otto de Mentock 8c6593985c Merge branch 'yaml-emit-numpy-scalar' into 'development'
single elements of numpy arrays are not of native type

See merge request damask/DAMASK!681
2022-12-08 12:03:54 +00:00
Daniel Otto de Mentock ba2062e4ed CSafeDumper is significantly faster and can be subclassed for custom extensions. 2022-12-06 20:17:23 +00:00
Sharan Roongta 4717536f1a Merge branch '241-same-quaternion-but-different-ipfs-calculated-by-damask-and-orix-python-package' into 'development'
lower exponent gives smoother gradients

Closes #241

See merge request damask/DAMASK!675
2022-12-06 14:15:35 +00:00
Philip Eisenlohr 7b8fce8db0 help polish 2022-12-05 18:29:03 -05:00
Martin Diehl ce2e0a01f5 single elements of numpy arrays are not of native type 2022-12-05 20:29:08 +01:00
Philip Eisenlohr 65cb9d5997 Merge branch 'development' into 228-unit-tests-for-spectral-functionality 2022-12-05 11:07:43 -05:00
Philip Eisenlohr f8ec873e54 == syntax consistency 2022-12-05 11:00:23 -05:00
Philip Eisenlohr 5127dfe90b from/as tests use rotation-array; separate bounds checks 2022-12-05 02:08:31 +00:00
Martin Diehl c7cb56fc18 lower exponent gives smoother gradients 2022-12-02 22:55:22 +01:00
Martin Diehl 18ad14708f stay consistent 2022-11-29 22:01:14 +01:00
Philip Eisenlohr 8ba9bb02c7 slight reduction of code doubling 2022-11-29 15:47:11 -05:00
Martin Diehl 741aeab1d3 Merge branch '235-docstring-of-orientation-from_axis_angle' into development 2022-11-29 06:06:31 +01:00
Martin Diehl d668f8a56d don't add empty strings 2022-11-28 20:05:39 +00:00
Daniel Otto de Mentock 8112f87d39 parameter names can contain underscores 2022-11-28 10:33:07 +01:00
Martin Diehl 39157b75b7 plane waves have known solutions 2022-11-27 16:53:53 +01:00
Martin Diehl 92ae86b636 Merge branch 'fix-mypy-no-implicit-optional' into 'development'
PEP 484 compatibility (no-implicit-optional in mypy)

See merge request damask/DAMASK!664
2022-11-25 21:25:33 +00:00
Martin Diehl 77be2c0d4c standard way to report 2022-11-25 07:00:15 +01:00
Martin Diehl e10f9fa299 not useful here
not a general convention, is documented for the affected from_/as_
methods
2022-11-25 01:25:36 +01:00
Martin Diehl f8844285d7 putting understanding of hybridIA into code 2022-11-25 01:15:39 +01:00
Martin Diehl eea0c4c44c return was missing 2022-11-24 10:15:23 +01:00
Philip Eisenlohr 6315f97f4a added explicit Optional type hint 2022-11-22 16:26:15 -05:00
Franz Roters 4a49523720 Merge branch 'mypy-etc-polish' into 'development'
Collection of small polishing steps

See merge request damask/DAMASK!659
2022-11-22 14:39:52 +00:00
Philip Eisenlohr cbe2e74cdd Collection of small polishing steps 2022-11-22 14:39:51 +00:00
Martin Diehl 815d825fac Merge branch 'material_add' into 'development'
configMaterial functionality

See merge request damask/DAMASK!651
2022-11-20 12:59:01 +00:00
Philip Eisenlohr 6907ca60b3 adjustments to make mypy happy 2022-11-19 20:55:23 -05:00
Daniel Otto de Mentock 5017aabcea util.extend_docstring: proper layout for extended class (incl. current return type) 2022-11-19 08:10:00 +00:00
Philip Eisenlohr 7e5a3a12ab proper dealing with default/mandatory items in material_add 2022-11-18 16:30:26 -05:00
Philip Eisenlohr d374f6a02c revert, since not working in python3.8... 2022-11-18 11:01:01 -05:00
Philip Eisenlohr 822a098659 cleaner way to specify default dict entries 2022-11-18 10:06:15 -05:00
Philip Eisenlohr ce4b373f9c Merge branch 'development' into '225-tolerate-non-unit-quaternion'
# Conflicts:
#   python/damask/_rotation.py
2022-11-18 00:48:45 +00:00
Philip Eisenlohr 87579dff11 extensive style polish; no functional changes 2022-11-17 18:39:32 -05:00
Martin Diehl 05974fb300 Merge branch 'polish-rotation-error-determination' into 'development'
cleaner and more efficient determination of ValueErrors

See merge request damask/DAMASK!656
2022-11-17 17:52:14 +00:00
Franz Roters bdd85a414c support for MSC.Marc 2022.2 2022-11-17 07:12:27 +00:00
Philip Eisenlohr 1f947245bb Merge branch 'development' into '225-tolerate-non-unit-quaternion'
# Conflicts:
#   python/damask/_rotation.py
#   python/tests/test_Rotation.py
2022-11-16 20:27:02 +00:00
Martin Diehl d887f0a9d8 better group if/if-elif cases
one line if only when no elif follows to avoid confusion
2022-11-16 21:13:13 +01:00
Philip Eisenlohr 25979fcd77 Merge branch 'development' into 'polish-rotation-error-determination'
# Conflicts:
#   python/damask/_rotation.py
2022-11-16 18:05:36 +00:00
Martin Diehl 5d656d9c76 Merge branch 'rotation-test-coverage' into 'development'
increase test coverage to 100%

See merge request damask/DAMASK!655
2022-11-16 14:31:43 +00:00
Philip Eisenlohr 740965df7c cleaner and more efficient determination of ValueErrors 2022-11-15 17:03:57 -05:00
Philip Eisenlohr 23d2337fb2 add option to normalize quaternions 2022-11-15 16:11:29 -05:00
Philip Eisenlohr 1dbf9ae9bc increase test coverage to 100% 2022-11-15 11:46:52 -05:00
Philip Eisenlohr 584d5b4213 Merge branch 'simplify-grid-scale' into 'development'
less repetition

See merge request damask/DAMASK!654
2022-11-15 14:44:53 +00:00
Philip Eisenlohr 045f1d39a1 add shorthand function for formatting 2022-11-14 14:52:07 -05:00
Philip Eisenlohr fa69a1876b unify X or list/seq/collection of X --> (A/B/C of) X in docstrings 2022-11-14 09:09:45 -05:00
Martin Diehl ba4ac5c108 less repetition 2022-11-14 12:42:13 +01:00
Philip Eisenlohr 2e7d59ab43 brief but comprehensive "is_complete" reporting 2022-11-11 18:07:48 -05:00
Sharan Roongta 4fc5ba54df dummy phase dict need to be added for any new material added (similar to dream3D) 2022-11-11 18:47:01 +01:00
Philip Eisenlohr 349a39609e Robust translation for view.times 2022-11-11 06:03:14 +00:00
Sharan 13df12be1b initialising dummy arguments with None, making few changes on what is_complete should do 2022-11-11 01:54:59 +01:00
Martin Diehl 26284ba2df accidentally added 2022-11-10 09:37:16 +01:00
Philip Eisenlohr 02d785f8f1 comprehensive simulation_setup tests 2022-11-09 17:32:14 -05:00
Philip Eisenlohr 5c6d21e9cf only create subdir when dataset 2022-11-09 17:32:14 -05:00
Philip Eisenlohr 4f6a1720cc recursive list of setup files; no printing but PermissionError 2022-11-09 17:32:14 -05:00