Commit Graph

680 Commits

Author SHA1 Message Date
Martin Diehl 18aa6f7f12 support for string arrays
allows to add phase label from mapping. Only scalar string arrays are
allowed (no real restriction)
2021-04-24 22:50:59 +02:00
Martin Diehl 3977e230b3 documenting and ensuring consistent argument names
'name' for a dataset matches the analogy to a file name
2021-04-24 14:47:45 +02:00
Martin Diehl 4d67c85a33 clarify out-of-place behavior and document return values 2021-04-23 23:32:09 +02:00
Martin Diehl 37df78a8e0 don't show progress bar for empty iterations 2021-04-10 15:01:50 +02:00
Martin Diehl 07d573a56d more helpful dataset descriptors
phase label for single phase material not helpful
2021-04-10 09:32:21 +02:00
Martin Diehl 63b343ad87 Merge branch 'development' into allclose-rotation-orientation 2021-04-10 08:05:25 +02:00
Martin Diehl e89236b14d bugfix:
don't overwrite data when doing a 'place-like' operation to merge
datasets
2021-04-08 17:36:33 +02:00
Martin Diehl 00aed99419 naming of tests should follow naming in class 2021-04-08 13:39:48 +02:00
Martin Diehl bc1454970c mandatory symmetry
if symmetry is not of interest, damask.Rotation should be used
2021-04-06 22:49:08 +02:00
Philip Eisenlohr bf2515c4c1 removed `Grid.diff` in lieu of `__eq__` 2021-04-06 12:10:35 -04:00
Philip Eisenlohr bf4c88a39e renamed result.read to get; polishing 2021-04-06 11:39:44 -04:00
Martin Diehl d5806075d4 distinguish isclose/allclose and __eq__ 2021-04-05 22:15:03 +02:00
Martin Diehl 115e3dd4c7 simplified 2021-04-05 17:18:12 +02:00
Martin Diehl 9db1ef9ed7 polishing 2021-04-05 13:41:49 +02:00
Martin Diehl 65b03aeb2d Merge remote-tracking branch 'origin/development' into Results.read-.place 2021-04-05 10:22:49 +02:00
Martin Diehl 62c85db745 out of place behavior 2021-04-05 08:03:00 +02:00
Martin Diehl e1d57f176d simplifying
[] has a special meaning for glob, use () to indicate direction for IPF
color. It is anyways the sample direction, not a crystallographic
direction
2021-04-04 19:05:58 +02:00
Martin Diehl d78e0085fc simplified 2021-04-04 18:32:17 +02:00
Martin Diehl 6f3dc80079 simplified/using new functionality 2021-04-03 16:32:48 +02:00
Martin Diehl 1b2d892b42 keep reference folder clean 2021-04-03 07:31:31 +02:00
Martin Diehl 20d0242d59 using new logic 2021-04-02 12:21:27 +02:00
Martin Diehl cf1ce6a1fe support for masked array
masked arrays are the outcome of Result.place
2021-04-02 08:07:22 +02:00
Philip Eisenlohr f6d6aefe1d function renaming; rewording of help messages 2021-04-01 18:41:28 -04:00
Martin Diehl 84e117c6b3 polished and added tests 2021-04-01 17:26:51 +02:00
Martin Diehl 4b9fcf2f77 testing new read functionality 2021-04-01 14:55:50 +02:00
Martin Diehl 85aaaa96f3 new tests 2021-04-01 10:47:45 +02:00
Martin Diehl 8a3af87e3e Merge remote-tracking branch 'origin/development' into spring-cleaning 2021-04-01 00:09:51 +02:00
Philip Eisenlohr 07c9cf5f1a - improved reporting and slicing of table.
- implemented numpy-like `allclose` and `isclose`
2021-03-31 18:30:07 +00:00
Martin Diehl e9c65dee73 documenting and testing 2021-03-31 10:59:21 +02:00
Martin Diehl be9e00347b cleaning
dropped support for legacy table
2021-03-27 10:11:31 +01:00
Martin Diehl 111a1a76c6 cleaning 2021-03-27 07:35:49 +01:00
Martin Diehl 9fd244d8a0 cleaning 2021-03-26 20:59:49 +01:00
Martin Diehl 9e9eb391ba handle floating point errors 2021-03-25 22:33:14 +01:00
Martin Diehl 3b392281e4 consistent naming in HDF5 output 2021-03-25 19:22:59 +01:00
Martin Diehl fe0cd8e5e2 transparently handle orientations/rotations 2021-03-25 15:30:31 +01:00
Martin Diehl 1ff6a09746 tests/specifications 2021-03-23 18:51:21 +01:00
Martin Diehl 572c3204d0 let the computer do the work 2021-03-23 14:28:56 +01:00
Martin Diehl e0e088eaa8 EBSD dataset for testing
use only non-segmented data. Automatically fall back to numeric phase
names if cell_ensemble_data is not found
2021-03-23 13:42:04 +01:00
Martin Diehl 394fda5f37 improving import from DREAM.3D
- no duplicated entries even for non-segmented data
- using phase labels from file
- material.yaml: Dummy homogenization and phase
- tests to ensure correct order and match between Grid and
  ConfigMaterial
2021-03-20 12:56:18 +01:00
Martin Diehl 35c5bfcc45 reference files for DREAM.3D operations
will be used for the configuration of material.yaml and grid (using
symbolic links)
2021-03-19 11:45:04 +01:00
Philip Eisenlohr a26e586b14 More general 'delete' (accepts iterables) and backports of '|' and '|=' for union/add.
'|=' would work for python 3.9 without extra code, but '|' unfortunately casts 'damask.Config' (subclass of 'dict') to a 'dict'.
2021-03-09 19:15:15 +00:00
Philip Eisenlohr 175d724ded added keepdims=False option to project_stereographic 2021-02-27 18:38:40 -05:00
Philip Eisenlohr ea763fd941 generalized stereographic projection to cope with all three directions (x,y,Z) 2021-02-27 11:15:01 -05:00
Philip Eisenlohr 2549d7a05a [skip ci] removed debug print statement 2021-02-24 15:50:06 +01:00
Philip Eisenlohr 69316f186b fixed ConfigMaterial.from_table; 2D grid.from_table now acceptable 2021-02-23 11:50:13 -05:00
Philip Eisenlohr 4a00254dba shortened material_add and allow for multi-constituent; broken from_table... 2021-02-22 22:47:08 -05:00
Martin Diehl 0461c404f7 numpy uses __array__ for casting
avoids infinite loop of __init__, __getitem__, and shape. Found on
8cf07f6113
2021-02-22 18:52:06 +01:00
Martin Diehl 67f0ab2ce8 silence deprecation warning 2021-02-22 08:46:28 +01:00
Philip Eisenlohr f609b61157 Merge branch 'development' into account-for-floating-point-precision-in-orientation 2021-02-15 16:26:25 -05:00
Philip Eisenlohr 6bbd55d967 exchanged c for x in from_cubochoric 2021-02-15 16:25:36 -05:00
Philip Eisenlohr 002cfbd085 Merge branch 'account-for-floating-point-precision-in-orientation' into 'development'
ensures that at least one orientation in the FZ is found

See merge request damask/DAMASK!337
2021-02-15 20:53:37 +00:00
Martin Diehl fe63adcca4 mimic python error message and ensure that error is raised 2021-02-12 18:20:39 +01:00
Sharan Roongta 9e8a243d6f avoid name conflict with lattice parameter 'c' 2021-02-12 12:15:08 +01:00
Martin Diehl 4bcbcb34d0 ensures that at least one orientation in the FZ is found 2021-02-09 23:58:00 +01:00
Sharan Roongta cab5a5cec7 homogenization 'none' name misleading. 2021-02-04 15:37:40 +01:00
Sharan Roongta 14ce127dc4 fraction --> v 2021-02-04 13:46:01 +01:00
Martin Diehl d76543f759 better name 2021-01-13 14:57:58 +01:00
Martin Diehl f4247e0f35 simpler (and scipy compatible) 2021-01-13 09:35:42 +01:00
Philip Eisenlohr 2d6e6a2370 Rotation composition uses "*"; application of Rotation to object uses "@"; "apply()" works on both 2021-01-12 18:57:33 -05:00
Philip Eisenlohr f0351e403a removed duplicate test 2021-01-07 11:01:15 -05:00
Philip Eisenlohr bde66d85fc Merge branch 'development' into python-improvements 2021-01-07 10:58:33 -05:00
Philip Eisenlohr 94cfe28128 polishing help; Rotation.apply(Rotation) now acceptable. 2021-01-06 18:03:10 -05:00
Martin Diehl acbb564afc restored functionalitity for adding list.
got accidently lost
2021-01-04 07:23:14 +01:00
Martin Diehl d8b4b7e0f5 != and == work componentwise 2021-01-03 21:52:19 +01:00
Martin Diehl f48a446353 compatible with scipy.spatial.transform.Rotation
also introduced inplace variants and '/' as multiplicative inverse of
'*'
2021-01-03 16:08:22 +01:00
Martin Diehl 98723cb0ed need to handle special case of Re() = 0
ensuring that the real part is positive seems to be a good idea on first
sight, but it would be easier to simply acknowledge that qu = -qu
2021-01-03 15:50:15 +01:00
Martin Diehl 5f1399acc3 consistent behavior with other classes
python dictionary operates in-place, so wrappers for out-of-place
behavior let it use like the other DAMASK classes
2021-01-03 12:09:21 +01:00
Martin Diehl 6fe1ff8e39 fixed test for rodrigues parametrization
for angle close to 180deg, the sign of the axis does not matter
2021-01-03 11:50:45 +01:00
Philip Eisenlohr da62daf15d added test for appending rotation lists; better check for type==list 2020-12-28 12:26:09 -05:00
Sharan Roongta 6cc78cb41e Merge branch 'misc-improvements' into 'development'
Misc improvements

See merge request damask/DAMASK!302
2020-12-18 15:19:04 +01:00
Martin Diehl 35f9861818 Fortran standard is 2018
will not work for older compilers
2020-12-18 15:19:04 +01:00
Philip Eisenlohr 403ac693da need to pass init argument to dict superclass 2020-12-17 18:08:55 -05:00
Martin Diehl aad123f41b Merge branch 'table-getitem' into development 2020-12-12 19:58:42 +01:00
Philip Eisenlohr 36e4042f0b removed "where" method from Table class 2020-12-11 19:31:19 -05:00
Martin Diehl 32c2de6b91 Ensuring regular spacing for grid 2020-12-10 22:47:30 +01:00
Martin Diehl 4286fc3b82 Merge branch 'development' into misc-improvements 2020-12-10 20:21:00 +01:00
Martin Diehl 78192ef3fd clearer naming + better comments, thanks to @p.eisenlohr 2020-12-07 17:49:37 +01:00
Martin Diehl ed286ee09f Merge branch 'rename-grid-2' into misc-improvements 2020-12-05 09:50:46 +01:00
Martin Diehl 171d642dbd rename: Geom -> Grid 2020-12-04 07:50:47 +01:00
Martin Diehl 0fdefa5e78 renames:
after the rename of "grid" to "cell", the name cell should not be used
for the coordinates of the cell centers. In agreement with the names
x_p/u_p for point positions/displacements, now the "point" is used to
refer to the materialpoints (i.e. cell centers)

Additionally, "_node"/"_point" are now suffixes to
"coordinates"/"displacements".

Finally, "coords" is renamed to "coordinates"
2020-12-03 23:59:37 +01:00
Martin Diehl ac0a20696c rename: grid -> cells 2020-12-03 22:16:34 +01:00
Philip Eisenlohr 4877334986 added getitem and where functionality to Table 2020-12-02 19:25:54 -05:00
Martin Diehl d3a5979d25 meaningful result 2020-12-02 14:45:47 +01:00
Martin Diehl aa8f30d746 Merge branch 'development' into ShowGrainBoundaries 2020-12-02 12:50:04 +01:00
Martin Diehl 1c2cdbd5a1 support of all standard numpy types
+ tests
2020-11-30 12:33:21 +01:00
Martin Diehl 813ef927c4 consistent with "save_XDMF" (capitalized) 2020-11-30 09:28:46 +01:00
Martin Diehl 4d2bf37193 Merge branch 'lattice-structure-rename' into ShowGrainBoundaries 2020-11-29 20:53:58 +01:00
Martin Diehl 1d05edd7b3 fixes:
- need to get crystal structure as attribute in test (generic function
  was removed, because the crystal structure is in general not the same
  over the whole domain)
- consistent sorting of attributes
2020-11-29 09:06:47 +01:00
f.basile 31df4c04c8 added test 2020-11-25 12:51:52 +01:00
Martin Diehl 5ab2847b36 polishing 2020-11-23 20:06:34 +01:00
Martin Diehl cbe8160e13 Merge remote-tracking branch 'origin/development' into vector-mechanics 2020-11-23 19:55:34 +01:00
Franz Roters 7356330cf6 Merge remote-tracking branch 'origin/new_names_result' into development 2020-11-23 11:49:15 +01:00
Sharan Roongta 24fabdec22 Merge branch 'development' into vector-mechanics 2020-11-22 12:02:29 +01:00
Martin Diehl 2de3a6a205 fits better to stretch_left/right 2020-11-19 22:46:52 +01:00
Martin Diehl a87596cefc return rotation type (ensures proper rotation) 2020-11-19 22:36:19 +01:00
Martin Diehl a4b5c2a537 shorter (but still self-explanatory) name 2020-11-19 15:20:44 +01:00
Martin Diehl 6e5cb60132 general tensor functionality 2020-11-19 15:16:01 +01:00
Martin Diehl 903c185ee6 distinguish 'file not found' and 'invalid file' 2020-11-19 10:39:41 +01:00
Philip Eisenlohr cb22c34db2 Geom.load_ASCII now auto-shifts material indices 2020-11-18 18:25:25 -05:00
Martin Diehl 843d7d8cac Merge remote-tracking branch 'origin/development' into new_names_result 2020-11-18 21:37:52 +01:00
Martin Diehl 564ee6c96a make uvw/hkl keyword-only arguments
avoid to prefer one over the other, since they are mutually exclusive
2020-11-18 16:45:53 +01:00
Martin Diehl 870c0f7aca removed aliases
required bump of DADF5 version
2020-11-18 14:53:11 +01:00
Martin Diehl 89c748fdf1 Merge remote-tracking branch 'origin/development' into vector-mechanics 2020-11-18 13:55:05 +01:00
Martin Diehl 6bedd84759 self-explanatory names 2020-11-18 08:15:04 +01:00
Philip Eisenlohr fa25a13264 fixed typo 2020-11-16 10:34:49 -05:00
Philip Eisenlohr de20e6b35d code shortening; list_predefined() --> property "predefined" 2020-11-16 10:23:26 -05:00
Martin Diehl 5ebde607a2 einsum simplifications 2020-11-16 07:43:20 +01:00
Martin Diehl 9b9d83d93c adding '_tensor' not needed 2020-11-16 01:15:39 +01:00
Martin Diehl b893967b68 more systematic names and extended docstrings 2020-11-16 01:02:36 +01:00
Martin Diehl 6f81f5278d separating general tensor math from mechanics operations 2020-11-16 00:13:34 +01:00
Martin Diehl fd8743af5e clearly distinguish seeds for tessellation and seeds for RNG 2020-11-15 13:49:17 +01:00
Martin Diehl 1541ac0add more intuitive use 2020-11-15 12:38:54 +01:00
Martin Diehl 01d84c1477 testing also functions with graphical output 2020-11-15 11:49:52 +01:00
Martin Diehl 15af12bbb4 __ne__ is automatically set to !__eq__, __neq__ has no special meaning 2020-11-15 11:38:26 +01:00
Martin Diehl 51e5dda702 documentation + consistent string formatting 2020-11-15 10:54:20 +01:00
Martin Diehl 149fce0a7e increase test coverage 2020-11-14 19:42:52 +01:00
Martin Diehl 764aacf2a1 increasing test coverage 2020-11-14 17:54:47 +01:00
Martin Diehl 9eb4e2d0de corrected handling of scalar/array arguments
+ more tests
+ corrected handling of numpy types
2020-11-14 17:26:38 +01:00
Martin Diehl 6529613726 Merge remote-tracking branch 'origin/development' into vector-mechanics 2020-11-14 15:10:52 +01:00
Martin Diehl bacfe9f462 Merge branch 'fix-add_primitive-rotation' into 'development'
Avoids coordinate normalization _before_ rotation

See merge request damask/DAMASK!276
2020-11-13 14:11:54 +01:00
Martin Diehl 7b7b449877 testing fixed behavior 2020-11-13 06:50:57 +01:00
Martin Diehl 8429a9d695 Merge remote-tracking branch 'origin/development' into modularize-mech 2020-11-11 07:04:23 +01:00
Martin Diehl 5926f84851 WIP: refactoring Orientation=Symmetry+Rotation, Lattice=subclass of Sym, and Crystal=Lattice+Rotation 2020-11-09 21:20:56 +01:00
Sharan Roongta 287d56fc3d consistent with new output names 2020-11-08 16:01:11 +01:00
Sharan Roongta 7d4163e8a9 new format of material.yaml 2020-11-08 15:57:06 +01:00
Martin Diehl 03a68248b5 polishing 2020-11-06 13:25:00 +01:00
Martin Diehl bbaeeb02da Merge remote-tracking branch 'origin/misc-improvements' into h5py3 2020-11-06 13:19:47 +01:00
Martin Diehl 58a5d2666c ensure correct Mises mode 2020-11-06 00:10:46 +01:00
Martin Diehl 4ccd068d3b catch error in case of exisiting dataset 2020-11-05 23:00:56 +01:00
Martin Diehl e649fb195f update to use variable-length strings 2020-11-05 22:34:41 +01:00
Martin Diehl 30938a8278 correct order (brackets) 2020-11-05 21:38:00 +01:00
Martin Diehl a416f5ed5b encode/decode for h5py3 not needed anymore
attribute values with variable-length strings will be interpreted as
str, not bytes
2020-11-05 16:13:29 +01:00
Martin Diehl ae959b9cc2 allow '.' in filenames 2020-11-04 18:08:04 +01:00
Philip Eisenlohr 2867050397 corrected shortened test logic 2020-11-02 18:31:37 -05:00
Philip Eisenlohr 4fa44d388d shortened test for monotonous increase of material index after sorting 2020-11-02 18:21:51 -05:00
Martin Diehl cf958d32b4 Merge branch 'development' into vector-mechanics 2020-11-02 15:23:11 +01:00
Martin Diehl 0ebb9b611d functionality to sort material id
convenient for layered materials
2020-10-31 20:46:21 +01:00
Martin Diehl cf740a279e combine constant with varying data 2020-10-31 09:56:43 +01:00
Philip Eisenlohr 46e5023f8b Merge branch 'geom-improvements' into 'development'
Geom improvements

See merge request damask/DAMASK!264
2020-10-29 23:53:33 +01:00
Martin Diehl 0e499eedf3 correct rounding/clearer logic 2020-10-29 18:35:22 +01:00
Martin Diehl 4b700d367e improved test 2020-10-29 17:59:44 +01:00
Martin Diehl 999cf53c07 tests+fixes 2020-10-29 07:42:41 +01:00
Martin Diehl 855bf124d3 faster
https://stackoverflow.com/questions/16992713
2020-10-28 16:53:16 +01:00
Sharan Roongta 21f095c9d8 Merge branch 'flexible-yaml-dump' into development 2020-10-28 16:19:17 +01:00
Martin Diehl 5f03e8cf8f 0-based material indices 2020-10-28 09:31:55 +01:00
Martin Diehl a5a127b787 new tests+ updated results 2020-10-27 16:46:08 +01:00
Martin Diehl 0804e6ee74 pythonic names 2020-10-27 13:50:47 +01:00
Martin Diehl 201a62d7c9 easier visualization if verts have a point-cell 2020-10-27 13:19:53 +01:00
Martin Diehl 4dd387d7f5 compatibility with old pyyaml + test for numpy 2020-10-27 06:39:58 +01:00
Martin Diehl bac7ace413 Merge remote-tracking branch 'origin/general-N_constituents' into vtr-only 2020-10-13 17:39:19 +02:00
Martin Diehl 86d91baf90 0-offset for geom 2020-10-10 10:36:15 +02:00
Martin Diehl ffabeacbcb removing functionality related to deprecated 'geom' format 2020-10-10 09:41:11 +02:00
Martin Diehl 00e2128e03 don't test ASCII functionality
vtr writing in Geom class is alwas serial, no need to wait
2020-10-10 09:02:25 +02:00
Martin Diehl 0c68d293b6 N_constituents is now a general homog property 2020-10-09 07:44:05 +02:00
Martin Diehl 1b18cae46b adjusted to new names 2020-10-02 17:49:52 +02:00
Martin Diehl a04966582a Merge remote-tracking branch 'origin/development' into general-config 2020-10-02 14:54:16 +02:00
Martin Diehl 58229b8851 relaxed test conditions
even threshold between -.5 and +.5 can result in a single material.
2020-10-02 13:26:11 +02:00
Philip Eisenlohr a59e64a8e4 renamed TPMS and added more from additional references 2020-09-30 17:28:25 -04:00
Martin Diehl 33685bc493 allow user do control output style
(numerics.yaml looks strange otherwise)
2020-09-30 12:32:37 +02:00
Martin Diehl 5ad46ae021 completely tested 2020-09-30 09:05:23 +02:00
Martin Diehl bbed4f9c6e nice formatting
will be checked by pre-receive hook
2020-09-30 08:15:02 +02:00
Martin Diehl b383a4530e better name, subclassing for easy extension to load 2020-09-30 07:53:25 +02:00
Martin Diehl 54e4943353 get rid of shell scripts 2020-09-30 07:11:33 +02:00
Martin Diehl 76f07e4c1e tmp_path is preferred over tmpdir 2020-09-29 19:25:50 +02:00
Martin Diehl 8d204ea445 [skip ci] small simplification 2020-09-28 16:17:43 +02:00
Martin Diehl d2cfcdaca0 reference Data for ODF sampling (hybridIA) + skeleton of a test 2020-09-28 16:14:27 +02:00
Martin Diehl 95b85626d8 general hybridIA functionality 2020-09-28 07:40:43 +02:00
Martin Diehl 9e3506b8ef thorougly testing seeding functionality 2020-09-25 07:41:58 +02:00
Martin Diehl e8454c40c7 more tests 2020-09-24 22:59:31 +02:00
Martin Diehl 4960cf43d4 documented and tested 2020-09-24 21:43:04 +02:00
Martin Diehl e5b414419a Poisson disc for periodic situation 2020-09-24 21:26:16 +02:00
Martin Diehl ec23ab8b61 basic test for seeding 2020-09-24 21:06:26 +02:00
Martin Diehl b5ea04424b Merge remote-tracking branch 'origin/development' into seeds-module 2020-09-24 20:58:53 +02:00
Philip Eisenlohr 8c8db5b99f switched "Geom.materials" to "Geom.material" 2020-09-23 17:27:15 -04:00
Martin Diehl ae579d8baa allow to specify seed IDs explicitly 2020-09-23 09:28:00 +02:00
Philip Eisenlohr 683161d479 Merge branch 'development' into geom-fully-out-of-place 2020-09-22 15:22:58 -04:00
Philip Eisenlohr 05835bacd3 removed set_X(), duplicate(), and .homogenization; renamed ".microstructure" to ".materials" 2020-09-22 14:49:28 -04:00
Franz Roters 7801f527f2 Merge remote-tracking branch 'origin/load-save-X-no-suffix' into development 2020-09-22 14:57:39 +02:00
Philip Eisenlohr 188905766f removed Geom.get_X() methods in favor of direct property access 2020-09-21 11:13:53 -04:00
Philip Eisenlohr ca2f3f9493 set_X and add_comments methods now default to out-of-place 2020-09-21 10:29:07 -04:00
Martin Diehl 7bdd44a3d9 consistent names:
default file operations: save/load, non-default save_xx/load_xx
2020-09-20 22:04:28 +02:00
Martin Diehl d33507866d statistically more valid test 2020-09-20 21:50:52 +02:00
Martin Diehl 6ab88aad2b default format for Table is ASCII
hence, renamed load_ASCII/save_ASCII to load/save
2020-09-20 20:45:06 +02:00
Martin Diehl 5895e74029 p is never above 1
1e-4 is quite low, usually we are far above. 1e-3 from https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.normaltest.html
is not too far away.
2020-09-20 19:13:54 +02:00
Philip Eisenlohr 5b0b0de6b4 assertion reports offense; fixed seeds for spherical and fiber 2020-09-20 12:22:41 -04:00
Philip Eisenlohr 3cc319ef08 removed debug print statement in test_util 2020-09-19 14:30:58 -04:00
Philip Eisenlohr 7cbd422ae3 fixed coprime error when encountering NaN 2020-09-19 13:38:32 -04:00
Martin Diehl 6f45203c98 first version of a pyaml based class for material configuration
pyaml is (again) actively maintained and the ruamel.pyaml API is
instable
2020-09-19 13:01:19 +02:00
Martin Diehl c42511f101 small polishing 2020-09-18 16:32:59 +02:00
Martin Diehl 1849ff0330 polishing 2020-09-18 15:03:51 +02:00
Martin Diehl e2cd3da295 remaning to_xx 2020-09-18 14:29:27 +02:00
Martin Diehl cdf3323774 Merge remote-tracking branch 'origin/development' into load-save-X 2020-09-18 14:21:43 +02:00
Martin Diehl ec7dbb4c9a do not store temp files 2020-09-18 14:21:30 +02:00
Martin Diehl 70911b64ea Merge branch 'development' into texture-components-in-rotation-class2 2020-09-16 09:57:50 +02:00
Philip Eisenlohr c6be6fe87f fixed spherical component sampling and testing 2020-09-15 18:40:05 -04:00
Philip Eisenlohr 0a34e342e4 fixed fiber component sampling and testing 2020-09-15 18:14:15 -04:00
Martin Diehl 9e93e8b710 test for last commit 2020-09-15 19:59:03 +02:00
Martin Diehl 3f823ca717 testing general case 2020-09-15 14:39:05 +02:00
Martin Diehl 18c38f1284 polishing 2020-09-15 13:49:44 +02:00
Martin Diehl 2a082b7983 methods for texture component calculations 2020-09-15 12:11:46 +02:00
Philip Eisenlohr 96ad358f83 modified file reading/writing methods to load_X, save_X formalism 2020-09-15 01:14:05 -04:00
Martin Diehl f6758ecc28 table class operates out of place 2020-09-14 07:04:01 +02:00
Philip Eisenlohr 9fb3fef4b0 changed British "normalise" to US "normalize" as we (should) follow US English everywhere else. 2020-09-08 10:39:31 -04:00
Philip Eisenlohr a4785ba562 modified file writing of geom and table to a general to_file() that takes a "format=" argument 2020-09-03 10:53:16 -04:00
Philip Eisenlohr d645849baf fixed remnant occurrences of .write() --> .to_file() 2020-09-02 11:32:40 -04:00
Philip Eisenlohr 6785062a10 Merge branch 'development' into 'vtk-to-file-method'
# Conflicts:
#   python/tests/test_VTK.py
2020-08-31 21:10:29 +02:00
Martin Diehl 03b02ad641 typos/sentence 2020-08-29 16:06:10 +02:00
Martin Diehl 0d5279863d avoid rounding errors related to rotation 2020-08-27 09:33:09 +02:00
Martin Diehl 248ef8ef97 more tests
- invalid files
- scalar/array size,center,exponent for add_primitive
- rotation invariance for add primitive
2020-08-26 23:56:20 +02:00
Philip Eisenlohr 3f24d16603 renamed VTK.write() to VTK.to_file() 2020-08-26 16:15:15 -04:00
Martin Diehl fee21cbd9c more sensible tests 2020-08-25 17:17:49 +02:00
Martin Diehl 96d4975fc4 using numpy functionality 2020-08-25 08:34:04 +02:00
Martin Diehl 51da632108 aiming at testing each individual statement 2020-08-25 07:49:56 +02:00
Martin Diehl 2d98325fa4 increasing test coverage 2020-08-25 01:21:17 +02:00
Martin Diehl 453f5a14c5 duplicated test (w/o wait for parallel out) 2020-08-25 00:53:05 +02:00
Philip Eisenlohr 2560f014a3 Merge remote-tracking branch 'origin/increase-geom-test-coverage' into geom-out-of-place 2020-08-24 17:17:31 -04:00
Martin Diehl 9d505c8518 better readable
- more explicit reporting
- always relative import for DAMASK
2020-08-24 09:58:24 +02:00
Martin Diehl b393da4955 relative imports
... it's all about damask.XXX
2020-08-24 07:28:10 +02:00
Philip Eisenlohr 3738002e4a forgot the new reference files... 2020-08-23 22:27:53 -04:00
Philip Eisenlohr 446ac03b07 All geom methods are now out-of-place, i.e. return an updated duplicate (to allow for daisy chaining).
* Added comments when methods acted.
* Added diff method
* Added flip method
* Fixed add_primitive inversion bug (again...)
* Fixed cell centering bug in add_primitive

* Added missing tests
2020-08-23 19:43:46 -04:00
Martin Diehl 22da3af92e cleaning (prospector complaint) 2020-08-24 00:44:18 +02:00
Martin Diehl c7cbd961a1 more systematic monkeypatching
allows comparison of reference files (log/history does not contain
information about damask.version and datetime.datetime.now)
2020-08-24 00:31:38 +02:00
Martin Diehl 6f79573140 more test coverage 2020-08-23 11:05:56 +02:00
Martin Diehl 07af7b2f98 geom is written to vtr exlcusively, not to general vtk
base tests on vtr
2020-08-23 10:50:15 +02:00
Martin Diehl 975db01f31 microstructure -> materialpoint
at least for new functionality
2020-08-23 09:38:08 +02:00
Martin Diehl b731b1e768 Geom.to_vtk improvements
- should be integer
- should have a test
2020-08-23 08:49:49 +02:00
Philip Eisenlohr 499ce01748 added Geom.copy() method 2020-08-22 13:57:31 -04:00
Philip Eisenlohr 752d6f773b corrected add_primitive test 2020-08-09 23:14:32 +02:00
Martin Diehl 0c6ce390b5 simple IO tests
can be improved ...
2020-08-08 20:35:50 +02:00
Martin Diehl 6a5471d243 have microstructure with 'to' and 'of' 2020-08-08 20:24:36 +02:00
Martin Diehl 55a620b378 migrating to library 2020-08-08 20:14:30 +02:00
Martin Diehl a0e0f28e51 migrating shell scripts to library 2020-08-08 19:42:34 +02:00
Martin Diehl 5fcff876f9 replace selectively
useful for vicinity_offset and add_primitive
2020-08-08 18:41:47 +02:00
Karo 7824a61f2e Merge branch 'user_defined_add_calculation' into 'development'
User defined add calculation

See merge request damask/DAMASK!195
2020-08-06 00:53:16 +02:00
Philip Eisenlohr ce00371f52 fixed rounding bug and updated reference images 2020-08-05 10:44:10 -04:00
Martin Diehl 7d49606597 restored correct bound calculation
test different bounds options
2020-08-04 20:34:40 +02:00
Martin Diehl e07c00a592 polishing + simple test
autoscaling seems to be broken
2020-08-04 20:14:04 +02:00
Martin Diehl 3f2e63977d not needed anymore 2020-07-31 19:46:44 +02:00
Martin Diehl 72ea9a5cec non-vectorized formulas can be implemented in a user function 2020-07-31 19:42:44 +02:00
Martin Diehl 50d7842dbe more tests 2020-07-31 16:50:01 +02:00
Martin Diehl daab5a8952 polishing 2020-07-24 22:42:16 +02:00
Martin Diehl 326b82b3aa symmetric scatter around nominal value 2020-07-24 22:41:41 +02:00
Martin Diehl b0e06f180a reading numpy manual ...
https://numpy.org/doc/stable/reference/generated/numpy.isclose.html
rtol=1.e-8, b=1 gives atol+btol=1.e-8+1e-9, simplified to 1e-8
2020-07-13 22:48:29 +02:00
Francisco Jose Gallardo Basile e1bbaac0d7 Merge branch 'Vectorize-Orientation' into 'development'
Vectorize orientation

See merge request damask/DAMASK!186
2020-07-03 12:22:04 +02:00
Philip Eisenlohr d4f97f8346 Merge branch 'misc-improvements' into 'development'
Misc improvements

See merge request damask/DAMASK!184
2020-07-02 21:52:47 +02:00
Philip Eisenlohr 81b3c10305 removed ambiguous variable "l" 2020-07-02 10:37:57 -04:00
Philip Eisenlohr 368a241931 added testing of __iadd__ and __invert__ 2020-07-02 10:27:52 -04:00
Martin Diehl 4abd77fccf more test coverage 2020-07-01 17:31:16 +02:00
Martin Diehl be1eb996e0 more tests and cleaning 2020-07-01 15:12:34 +02:00
Martin Diehl a7e3dd5a56 Merge branch 'development' into Vectorize-Orientation 2020-07-01 13:30:39 +02:00