Commit Graph

758 Commits

Author SHA1 Message Date
Martin Diehl 0e48f04d0f consistent naming 2022-12-11 16:09:54 +01:00
Daniel Otto de Mentock 8c6593985c Merge branch 'yaml-emit-numpy-scalar' into 'development'
single elements of numpy arrays are not of native type

See merge request damask/DAMASK!681
2022-12-08 12:03:54 +00:00
Martin Diehl ce2e0a01f5 single elements of numpy arrays are not of native type 2022-12-05 20:29:08 +01:00
Philip Eisenlohr 5127dfe90b from/as tests use rotation-array; separate bounds checks 2022-12-05 02:08:31 +00:00
Martin Diehl f8844285d7 putting understanding of hybridIA into code 2022-11-25 01:15:39 +01:00
Martin Diehl 815d825fac Merge branch 'material_add' into 'development'
configMaterial functionality

See merge request damask/DAMASK!651
2022-11-20 12:59:01 +00:00
Daniel Otto de Mentock 5017aabcea util.extend_docstring: proper layout for extended class (incl. current return type) 2022-11-19 08:10:00 +00:00
Philip Eisenlohr ce4b373f9c Merge branch 'development' into '225-tolerate-non-unit-quaternion'
# Conflicts:
#   python/damask/_rotation.py
2022-11-18 00:48:45 +00:00
Philip Eisenlohr 1f947245bb Merge branch 'development' into '225-tolerate-non-unit-quaternion'
# Conflicts:
#   python/damask/_rotation.py
#   python/tests/test_Rotation.py
2022-11-16 20:27:02 +00:00
Philip Eisenlohr 25979fcd77 Merge branch 'development' into 'polish-rotation-error-determination'
# Conflicts:
#   python/damask/_rotation.py
2022-11-16 18:05:36 +00:00
Philip Eisenlohr 740965df7c cleaner and more efficient determination of ValueErrors 2022-11-15 17:03:57 -05:00
Philip Eisenlohr 23d2337fb2 add option to normalize quaternions 2022-11-15 16:11:29 -05:00
Philip Eisenlohr 1dbf9ae9bc increase test coverage to 100% 2022-11-15 11:46:52 -05:00
Philip Eisenlohr 349a39609e Robust translation for view.times 2022-11-11 06:03:14 +00:00
Sharan 13df12be1b initialising dummy arguments with None, making few changes on what is_complete should do 2022-11-11 01:54:59 +01:00
Martin Diehl 26284ba2df accidentally added 2022-11-10 09:37:16 +01:00
Philip Eisenlohr 02d785f8f1 comprehensive simulation_setup tests 2022-11-09 17:32:14 -05:00
Sharan Roongta 443d796643 phase and homogenization dict to be updated when new material added 2022-11-09 23:13:45 +01:00
Martin Diehl 75cf446654 including restart information
needed updated tests after generating new HDF5 file
2022-11-09 22:50:32 +01:00
Martin Diehl b2db825fca newest file format 2022-11-09 22:06:20 +01:00
Philip Eisenlohr 1a748ec5aa shorter function name; setup_files is property 2022-11-09 09:39:47 -05:00
Daniel Otto de Mentock 1cdb7ef09f function to list available setup files can be useful 2022-11-09 12:48:37 +01:00
Daniel Otto de Mentock ce7d2af6e3 simulation setup export function naming and description was inaccurate 2022-11-09 12:47:47 +01:00
Philip Eisenlohr b5b861afdd Merge branch 'result-export-DADF5' into 'development'
export to new DADF5 file

See merge request damask/DAMASK!644
2022-11-08 19:01:48 +00:00
Martin Diehl 4f0db64e15 grid assemble + corrected grid.scale 2022-11-08 18:52:08 +00:00
Martin Diehl 015f1ec741 possibility to export into new DADF5 file 2022-11-07 10:10:13 +01:00
Martin Diehl 0fa9631675 testing output of export_result 2022-11-06 23:16:30 +01:00
Daniel Otto de Mentock 2c3da9c1bf added custom path export option to Result.export_* functions 2022-11-06 18:10:23 +00:00
Daniel Otto de Mentock 580e01bd1c fix grid add primitive bug 2022-08-29 11:44:50 +00:00
Philip Eisenlohr ef8891797a Merge branch 'development' into empty-table-init 2022-08-12 16:15:33 -04:00
Philip Eisenlohr 7082eab366 small test to demonstrate alternative Table init 2022-07-08 18:01:36 +02:00
Martin Diehl bcd3d00960 fixed test
this tests should ensure that each Orientation has exactly one symmetrically
equivalent representation. It was not fully correct before and works as expected
after 8fefc46f38
2022-06-10 09:26:15 +02:00
Martin Diehl cdd3b44519 using more precise coefficients also in test
changes in _rotation.py are just cosmetic
2022-06-09 23:54:56 +02:00
Martin Diehl 556d9d840e specifying V_e is more natural than F_i 2022-05-19 01:15:17 +02:00
Martin Diehl 6c7f2344da Merge branch 'normalize-to_pole' into 'development'
normalize to_pole output by default

See merge request damask/DAMASK!578
2022-05-15 21:46:27 +00:00
Martin Diehl c8d48d6eb9 Merge branch 'universal-VTK.set' into 'development'
Universal VTK.set

See merge request damask/DAMASK!577
2022-05-13 03:44:11 +00:00
Martin Diehl 236a009e2b Merge branch 'universal-table.set' into 'development'
universal Table.set

See merge request damask/DAMASK!576
2022-05-11 22:30:42 +00:00
Philip Eisenlohr 648d17d381 renamed .add to .set to be consistent with Table.set 2022-05-11 18:19:10 -04:00
Philip Eisenlohr 35aa8a9bc6 combine table.add and .set 2022-05-11 09:19:48 -04:00
Franz Roters 53c345f4f1 Merge branch 'from_fiber-improvements' into 'development'
From fiber improvements

See merge request damask/DAMASK!573
2022-05-11 13:13:31 +00:00
Philip Eisenlohr b080e414ae normalize to_pole output by default 2022-05-11 08:55:55 -04:00
Martin Diehl 302f020f63 looks better
at least on Linux
2022-05-11 09:22:05 +02:00
Philip Eisenlohr c9f344758a use symmetry-aware Miller brackets in Result.add_pole 2022-05-10 15:26:33 -04:00
Martin Diehl f27969caf9 documenting and testing 2022-05-08 23:22:03 +02:00
Martin Diehl 06cef42927 use physical/ISO convention 2022-04-28 15:57:04 +02:00
Martin Diehl a0455cadf3 consistently have input in radians 2022-04-28 15:46:19 +02:00
Martin Diehl 5c4d481155 common order is theta,phi 2022-04-28 01:33:33 +02:00
Martin Diehl e0d2859202 better test coverage 2022-04-27 17:25:39 +02:00
Philip Eisenlohr 8f0240c67b avoid option clash in Orientation.from_fiber_component 2022-04-27 08:59:55 -04:00
Martin Diehl f3cf67d3fa avoid code duplication and inconsistencies 2022-03-27 09:55:20 +02:00
Martin Diehl 0d57a13c9b run tests on Windows
XDMF does not work (not sure why, works locally)
2022-03-26 22:16:32 +01:00
Martin Diehl bd56a3f2a5 tests might fail on windows 2022-03-26 22:13:54 +01:00
Martin Diehl ff3d3afe9e '/' is separator in h5py even on windows.
os.path assumes OS-dependent path separators
2022-03-26 22:09:45 +01:00
Martin Diehl c11d38b2ec avoid blocking pop-up 2022-03-26 22:08:09 +01:00
Philip Eisenlohr 5b87fafcae Merge branch 'consistent-orientation-from' into 'development'
consistent "shape" keyword in from_X

Closes #165

See merge request damask/DAMASK!546
2022-03-20 00:00:25 +00:00
Philip Eisenlohr 21e076b0f9 Table.save(with_labels=False) to properly store ANG 2022-03-17 21:23:57 -04:00
Philip Eisenlohr 378b8b2396 use consistent "shape" keyword when shape not clear from input data 2022-03-14 16:24:05 -04:00
Philip Eisenlohr 56c33b8a5c flipped VTK.add to use (label,data) to be consistent with other functionality 2022-03-11 20:07:18 -05:00
Martin Diehl 0d22cfb83d table.__init__ now has common order of arguments (label, data) 2022-03-11 22:31:35 +01:00
Martin Diehl c5c2763e1f several improvements
- DataFrame.append is deprecated
- restored special case `None` for Grid.vicinity_offset and Grid.clean
- sorted procedures of Grid according to functionality
2022-03-11 22:22:12 +01:00
Martin Diehl d1c6434bb2 corner case: empty set
will be checked by extra test
2022-03-10 07:37:46 +01:00
Philip Eisenlohr 4f6d9aa4b6 adjusted faulty test 2022-03-09 19:01:45 -05:00
Philip Eisenlohr f13a4c82da grid.clean/vicinity now uses ball neighborhood; lots of polishing 2022-03-09 18:26:52 -05:00
Martin Diehl b916712946 Merge remote-tracking branch 'origin/keyword-view' into polishing 2022-03-09 15:36:00 +01:00
Martin Diehl c2453c56f1 Merge remote-tracking branch 'origin/development' into polishing 2022-03-09 15:22:22 +01:00
Martin Diehl c4a7c0096a give default directly
only Colormap object caused problem (tab completion triggered '__repr__'
which means showing colormap in maplotlib window
2022-03-08 22:43:54 +01:00
Philip Eisenlohr 73f01c07d0 clarified colormap default; accept string as colormap name 2022-03-08 09:31:08 -05:00
Martin Diehl fe8e55e470 KeyError more sensible here 2022-03-07 11:28:17 +01:00
Martin Diehl d7ba853859 use None for no selection, empty list is 'nothing' 2022-03-05 20:37:47 +01:00
Martin Diehl a77b63718c remove deprecated interface options 2022-03-04 20:27:32 +01:00
Martin Diehl 161e4b6815 testing new functionality 2022-03-04 10:57:49 +01:00
Martin Diehl 03912b0a03 Merge remote-tracking branch 'origin/development' into polishing 2022-03-04 03:44:36 +01:00
Martin Diehl f9e04bc4cb unifying interface
same same for same functionality, allow user to specify single integer
for convenience
2022-02-28 16:14:40 +01:00
Martin Diehl c7b512a94e support the user 2022-02-26 17:40:12 +01:00
Philip Eisenlohr bee3f08d77 test __repr__ functionality with str() 2022-02-24 19:15:28 -05:00
Philip Eisenlohr fd52c18488 remove debug print statements in tests 2022-02-24 18:35:48 -05:00
Martin Diehl 59755c67ce human-readable reporting 2022-02-23 06:49:38 +01:00
Philip Eisenlohr 661b7fb602 slight polish 2022-02-22 10:56:12 -05:00
Martin Diehl be11da2284 testing new functionality 2022-02-22 14:00:36 +01:00
Martin Diehl e8a4f06634 out of place behavior for VTK 2022-02-22 07:49:44 +01:00
Philip Eisenlohr 0adc827278 Merge branch 'development' into python-vtk-improvements 2022-02-18 14:46:40 -05:00
Philip Eisenlohr e602653b3b remove obsolete grid_filter import 2022-02-17 18:50:53 -05:00
Philip Eisenlohr 38ac791b58 proper understanding of a rectiliniearGrid 2022-02-17 17:54:26 -05:00
Martin Diehl ed50cd022b shorter, potential for higher precision
np.sum has an better alogrithm but fails ...
2022-02-16 23:40:02 +01:00
Philip Eisenlohr 4426172c14 Merge branch 'development' into python-vtk-improvements 2022-02-15 18:07:18 -05:00
Philip Eisenlohr c5f2865121 make apparent that vtk.get automatically "squeezes" 2022-02-15 18:04:21 -05:00
Philip Eisenlohr e2d1ffe7b8 condensed add_table test 2022-02-15 16:42:17 -05:00
Philip Eisenlohr 6916160ed1 implemented VTK.add(damask.Table) 2022-02-15 16:38:02 -05:00
Franz Roters d4f7114164 Merge branch 'improved-table-slicing' into 'development'
Extended slicing functionality of Table

See merge request damask/DAMASK!522
2022-02-15 12:48:39 +00:00
Philip Eisenlohr 2ce464c48e vtk.comments as directly accessed property 2022-02-14 09:24:12 -05:00
Philip Eisenlohr 1b08f90d6c allow constant (non-label) value in cm.from_table() keys 2022-02-13 23:54:16 -05:00
Philip Eisenlohr 0300912b30 Table.__eq__ for proper comparison; logical masks for slicing now work 2022-02-13 22:00:48 -05:00
Sharan d72347fe25 Merge remote-tracking branch 'origin/development' into thermal-restart 2022-02-02 23:07:32 +01:00
Martin Diehl 6dcf6b972c complaints from prospector (PEP8) 2022-02-02 09:14:41 +01:00
Sharan 1bd654781b tests updated 2022-02-02 00:20:14 +01:00
Philip Eisenlohr 6bd23715b8 added multiplication as color repeat functionality 2022-01-24 11:56:33 +01:00
Martin Diehl a545baebbf VTK polishing
avoid segmentation fault (also allows testing)
2022-01-16 19:23:12 +01:00
Martin Diehl 6657e5c4eb testing a few corner cases
behavior for __eq__ is now following python standard, comparing to wrong
class gives False
2022-01-15 13:22:15 +01:00
Martin Diehl 3acabcdc7f docstring adjustments 2022-01-12 23:57:21 +01:00
Martin Diehl 2c1231a806 using best practices from grid_filters 2022-01-12 23:06:48 +01:00
Martin Diehl 8de4829d0f testing non-trivial situation 2022-01-10 08:03:37 +01:00
Martin Diehl 100565c79b slip systems for tI (bct)
simple test. Not the best, but allows easy comparison with
- grep NTWINSYSTEM\ = src/lattice.f90
- grep NSLIPSYSTEM\ = src/lattice.f90
2022-01-05 08:08:10 +01:00
Philip Eisenlohr b2d0fd8ff5 Lambert azimuthal equal-area (laea) projection 2021-12-28 10:19:17 +00:00
Philip Eisenlohr 2ea2930638 Merge branch 'keyword-view' into 'development'
using keywords instead of strings to control view

Closes #133

See merge request damask/DAMASK!484
2021-12-24 23:07:10 +00:00
Martin Diehl dc5172ce63 don't use deprecated functions 2021-12-22 12:41:16 +01:00
Martin Diehl c1eabc3384 simplified interface 2021-12-17 10:31:41 +01:00
Martin Diehl 0b6af19e54 use of keywords is more intuitive
code needs cleaning after revoming of 'what' and 'datasets'. For the
moment, keep the old style for compatibility with existing evaluation
scripts
2021-12-17 09:48:33 +01:00
Philip Eisenlohr 2b4487f426 forgot to update test 2021-12-13 19:07:18 -05:00
Eureka Pai 2b6283bbe3 flexibility to return with alpha channel and/or as string 2021-12-10 12:53:01 -05:00
Eureka Pai 947bf946e1 added Colormap.at(fraction) to interpolate 2021-12-10 11:31:26 -05:00
Martin Diehl fe2123bae4 2. order prismatic systems are not needed
not clear for which material they have been introduced, according to
T.R. Bieler and P. Eisenlohr they are typicall not active in any
material of interest
2021-12-06 12:23:24 +01:00
Martin Diehl 99166a7ce2 Merge remote-tracking branch 'origin/colormap-docstrings' into development 2021-12-03 12:18:24 +01:00
Philip Eisenlohr d5da47bf71 extend config init to allow YAML string and key=value pairs 2021-12-02 18:20:27 -05:00
Martin Diehl 5abfe3c214 Merge remote-tracking branch 'origin/development' into MSC-Version 2021-12-01 15:35:49 +01:00
Martin Diehl 3a51e1119b text files on Unix should end with a new line character 2021-11-30 13:11:40 +01:00
Philip Eisenlohr bd908dc425 test __eq__; polish help strings 2021-11-25 13:14:34 -05:00
Martin Diehl c23e9fb126 __eq__ not implemented
probably also not very much used outside tests
2021-11-23 20:34:19 +01:00
Martin Diehl 3393d32d9f more sensible test vor sequence arguments 2021-11-23 19:42:10 +01:00
Martin Diehl 889ab87914 simplified and corrected
- Optional not needed for 'None' argument
- Use TextIO for typehints, TextIOWrapper seems to cause problems
- Test for tuple/list input for public functions
- internal functions that are always called with np.ndarray don't need
  to offer flexibility. They might work, but we don't guarantee
  anything.
2021-11-23 17:59:56 +01:00
Martin Diehl 59b6b4bb2b Merge branch 'clean-CI' into development 2021-11-16 23:38:14 +01:00
Martin Diehl e2e80b9706 cleaning tests 2021-11-16 11:24:04 +01:00
Martin Diehl ec24af2403 testing new functionality 2021-11-14 11:45:13 +01:00
Philip Eisenlohr ddb25ad0e5 remove duplicate lattice_symmetries dictionary 2021-10-29 20:04:09 -04:00
Philip Eisenlohr b11a14999b simplified lattice point data; added test 2021-09-30 11:01:42 -04:00
Sharan c7039e19b0 testing new functionality 2021-09-13 15:04:09 +02:00
Martin Diehl 0653d0c481 shortened thanks to lazy evaluation 2021-09-02 14:35:16 +02:00
Martin Diehl 727cc9da12 ready for production 2021-09-02 08:56:11 +02:00
Martin Diehl 2b9d416734 fixes for old VTK and/or old numpy 2021-09-02 08:45:20 +02:00
Philip Eisenlohr 56c62f257a more robust RuntimeError test; corrected name of double-defined test 2021-08-19 06:10:08 +02:00
Philip Eisenlohr 5dbb60d338 add_pole now has option "with_symmetry" 2021-08-19 06:10:08 +02:00
Philip Eisenlohr b754617c76 to_pole now blends; corrected help texts 2021-08-19 06:10:08 +02:00
Martin Diehl f3d8d78879 does not work on MacOS 2021-08-18 11:22:16 +02:00
Martin Diehl 041d3ffdd7 test more 2021-08-18 11:17:13 +02:00
Martin Diehl 5a2cd83186 recalculated with new DADF5 version 2021-08-18 10:52:47 +02:00
Martin Diehl c5f284cd8d increased test coverage 2021-08-18 10:44:04 +02:00
Martin Diehl 4a5e5d8451 avoid DAMASK_grid version dependency 2021-08-18 10:24:24 +02:00
Martin Diehl 81bac268f7 increasing test coverage 2021-08-18 09:36:28 +02:00
Martin Diehl ef4e4ec772 needs to be a 2D array 2021-08-18 09:17:06 +02:00
Martin Diehl b13e7e174b avoid invalid DADF5 2021-08-16 21:31:17 +02:00
Martin Diehl b1dab5f398 tests working now 2021-08-08 10:44:38 +02:00
Martin Diehl b5be4c3fa5 compatible with material.yaml 2021-08-04 17:45:25 +02:00
Martin Diehl dd2d569482 ensure that vectorization works 2021-07-25 21:28:35 +02:00
Martin Diehl de428efca5 add_pole is working again 2021-07-18 18:58:05 +02:00
Martin Diehl 212a4ed63c don't test implementation details 2021-07-18 15:57:51 +02:00
Martin Diehl e54f032f1e Merge remote-tracking branch 'origin/development' into restructure-Orientation-2 2021-07-18 15:09:40 +02:00
Martin Diehl 7745640393 consistently use prefix as modifier 2021-06-28 23:41:50 +02:00
Martin Diehl 0a22916aba not a double subscript 2021-06-19 15:13:27 +02:00
Martin Diehl abd660e62d Merge remote-tracking branch 'origin/development' into polishing 2021-06-19 13:28:56 +02:00
Martin Diehl 71634f6ce9 split into two tests, one will fail on Ubuntu 2021-06-19 08:12:49 +02:00
Martin Diehl 56b011aa54 better have tests 2021-06-18 21:11:01 +02:00