2d4cb6d128
first point on slice always starts at (0,0)
...
added option to visualize results
2013-05-08 15:59:51 +00:00
bd33169118
mistakenly committed table2ang in rev 2380, instead of vtk2ang. reverted changes in table2ang
2013-05-08 15:58:17 +00:00
ed9413a008
added simple output about progress
2013-05-07 14:32:38 +00:00
543cbf3a14
first point on slice always starts at (0,0)
2013-05-07 13:18:26 +00:00
c7f987a3c1
"unitlength" parameter, which determines the physical size of the mesh, now available as a global mesh variable "mesh_unitlength" and written to the .mesh file during init.
...
Hence, it is available to the marc_deformedGeometry.py script via "mesh_init_postprocessing()" and "mesh_get_unitlength()", so no need for setting the scaling of the displacement vectors explicitly through an option; now displacements and nodal positions are always consistent
2013-05-07 13:06:29 +00:00
9656d06fcc
- all length in nag file in micrometer
...
- "size" option replaced by "scale": uniform scaling of all length
- default normal in negative z-direction
- more output in verbose mode
- ang file numbering starts with 1
- positions in ang file in TSL, not lab frame
2013-05-07 12:57:34 +00:00
278198121d
only import vtk classes that were used
2013-05-06 16:55:44 +00:00
f5482ffbf4
new script that generates ang files for slices through vtk data set
2013-05-06 16:37:54 +00:00
43647fc5e6
use datatype double instead of float for ouputs
2013-04-30 14:45:29 +00:00
12ca2c1931
added scaling option for displacements
2013-04-29 16:02:30 +00:00
9afaa9f4d0
set "line breaks" and "keywords" property
2013-04-29 09:24:07 +00:00
fbb8353bba
check if data set attribute is already present
2013-04-29 09:23:16 +00:00
cc72c0b17b
added two new scripts:
...
"marc_extractData" is a simple variant of the "postResult" script that extracts all data from a macro *.t16 file (quadratic elements not yet supported) and writes it into an asciitable
"addDataToGeometry" searches for corresponding *.txt and *.vtk file in a given directory and adds the data from the *.txt file as SCALARS to the *.vtk file
first script needed an additional function in mesh that returns the corresponding node of a given ip in a specific element
2013-04-28 20:56:17 +00:00
650b7ef4ac
added python script that produces vtk files with the (node based and ip based) deformed mesh from marc output file
2013-04-23 18:30:56 +00:00
b572c71db0
fixed small bug in error reporting (missing column head complaint was broken...)
2013-04-16 20:10:17 +00:00
b4f67248a5
deleted two simple scripts used for debugging but with almost no use any more
2013-04-12 13:22:15 +00:00
770712529d
one more bug fix related to scaling
2013-03-26 16:16:59 +00:00
ccef9d4f73
fixed scaling option
2013-03-26 14:18:29 +00:00
5b96c1d62a
scaling of deformation gradient fluctuations now possible in x,y,z independently (give array).
2013-03-22 15:09:55 +00:00
cd86a80c2b
corrected handling of default value and cases where the deformation gradient is not f
2013-03-19 18:22:14 +00:00
43ec1d2051
added output of perceptual unfiform colormaps to GOM (DIC Aramis) format, deleted some old files in the documentation folder
2013-03-19 15:19:46 +00:00
757c3e5a04
fixed bug in averageDown and updated test
2013-03-13 16:23:02 +00:00
30024af6c2
polished string concatenations
2013-02-14 21:33:11 +00:00
a7e7a857c3
readjusted color values to work nicely with Msh colorspace (as in ParaView)
2013-02-02 20:17:54 +00:00
ac562f4b8b
changed internal color mapping to damask.Colormap class
2013-02-02 15:12:43 +00:00
e74b5da19a
changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
...
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
963ff0c3ae
added support for tetrahedron element with 4 integration points (Marc ID 127)
2013-01-28 16:25:43 +00:00
e691ff1ea1
updated setup_processing and corrected descriptions for new scripts
2013-01-22 09:56:36 +00:00
a4abebfcbb
some potentially useful postprocessing scripts
2013-01-21 23:15:23 +00:00
5676330e93
parsing options and file handling for perceptually linear diverging and sequential colormaps
2013-01-18 17:15:30 +00:00
e51779579e
removed (unsupported) "--geom" option.
2013-01-18 13:01:43 +00:00
7ac7d1a657
new tool for creation of colormaps, now using proper classes
2013-01-15 18:24:10 +00:00
cd5197556b
sequential colormapping with options for desired color and type(increasing or decreasing) is now working
2013-01-04 19:50:39 +00:00
820b8eb2c1
put colormap related functions into library, renamed and added scripts for creation of colormaps
2013-01-04 13:57:36 +00:00
6ab79d5593
added options for parsing and the colormap. Customized colormap is written out as an xml file importable into paraview.
2013-01-04 12:04:05 +00:00
3242361c91
added a minor change to the string expression and the for loop.
2013-01-04 12:01:34 +00:00
7157e8f03c
changed some of the color-space conversion formulae.
2013-01-04 12:00:10 +00:00
a69aaa1315
Use scipy euclidean distance function instead of FMM (runs without skfmm
...
module installed)
2012-12-19 14:50:45 +00:00
260e4191a0
replaced tabs by spaces
2012-12-13 18:15:10 +00:00
dfb791bcaf
only complain about missing Mentat release if needed...
2012-12-12 08:33:42 +00:00
34645a7222
write warning about missing Mentat release to stderr instead of stdout
2012-12-12 08:21:59 +00:00
93d822aaa1
symmetric colormap always with pure white in the middle
2012-12-11 16:50:34 +00:00
726d1173e5
polishing
2012-12-07 17:46:28 +00:00
c4ef2e5925
bug fixes
2012-12-07 17:41:50 +00:00
eaf7072bc1
Vectorized checking of neighbourhood for unique microstructure
...
(faster)
M addEuclideanDistance.py
2012-12-07 10:50:34 +00:00
a37250eef4
script to add the Euclidean distance map from boundaries, triple lines, and quadruple points to an ASCIItable of a regular grid.
...
requires numpy, scipy, and skfmm...
2012-12-06 21:49:49 +00:00
2d4cf7da74
conditions can handle string data.
...
use "#s#label#" format to indicate that column headed by "label" contains strings (not floats)...
2012-12-03 14:29:21 +00:00
7d96bb7ce8
Add column(s) containing directional stiffness based on given cubic stiffness values C11, C12, and C44 (in consecutive columns)
2012-12-03 13:10:16 +00:00
faa5f3c459
corrected severe bug in (non-logarithmic) strain calculations..!
2012-11-30 15:02:25 +00:00
72159e867c
fixed buggy file handling for multiple input files
2012-11-30 11:03:53 +00:00
74f62c891d
slightly safer file closing strategy
2012-11-30 08:38:52 +00:00
9fb838fd28
changed switch from "sequential" to "column"
2012-11-30 08:29:34 +00:00
1bd6bcfe3d
script to list info, labels, and/or data of an ASCIItable
2012-11-30 08:26:13 +00:00
f446d4d87e
added wildcard matching ( "?", "*", "[(!)sequence_of_characters]" ) for ASCII table labels
2012-11-29 10:42:13 +00:00
255af58434
post processing script to add eigenvalues and eigenvectors to tensorial data in ASCII tables.
2012-11-23 21:49:30 +00:00
78c22d8449
corrected label in case of divergence of tensor, now using correct notation for scalar: divFFT(data) instead of 1_divFFT(data)
2012-11-21 10:31:52 +00:00
b988caa6ba
added script to add deviatoric and hydrostatic part of a tensor to ASCII table
2012-11-14 10:46:51 +00:00
1fc59107fa
removed debug statement in averageDown.py, deleted obsolete spectral_iterationCount.py (new solver will report statistics anyway and most probably the current count does not work as the screen output was modified)
2012-10-31 10:06:11 +00:00
b9aa50c59a
improved performance for large packing values
2012-10-26 12:59:43 +00:00
573c4702eb
fixed bug in averageDown.py and added test to check its features
2012-10-17 15:05:26 +00:00
dcff640926
fixed handling of given resolution and dimension
2012-10-17 10:04:13 +00:00
6c7affc43f
improved performance (hopefully)
...
now each new element gets a new ID, running from 1 to N for N elements
2012-10-16 18:06:02 +00:00
1004d744f2
output speed-up by *show_table/*show_model masking
2012-10-05 21:49:33 +00:00
c377dae9a6
added option to create hexagonal grid (2D slices only, according to P. Konijnenbergs experience on 3D ang)
2012-10-05 17:25:54 +00:00
6d97a92913
further improvements on the conversion, seems to work quite good for the 2D case now
2012-09-28 12:10:10 +00:00
6619717baf
improved the conversion of tables to ang files
2012-09-26 12:20:14 +00:00
dc55e30cf1
added "startingIncrement" to spectralOut result interpretation
2012-09-05 15:14:36 +00:00
b7dc9f9944
renamed spectral_buildElements.py to nodesFromCentroids.py and added first simple version of an ascii table to ang converter
2012-08-30 17:01:46 +00:00
3f99d2bb65
further improved prefix handling
2012-08-27 09:39:57 +00:00
96ba5ecae4
moved some more 'mesh related' functions for post processing from math.f90 to mesh.f90
...
f2py functions remaining in math.f90 now uses assumed size arrays in order to have simpler interfaces. This is only working with python 2.7!
changed python pre- and postprocessing scripts.
If you encounter any problems whith core modules, try to remove the old core.so in the lib/damask
2012-08-27 08:04:47 +00:00
975c3437ac
added possibility to use comma in functions, to prevent splitting substituted by ';'. Eg. round(4.021,1) becomes round(4.021;1) in command line call
2012-08-22 17:47:34 +00:00
4cfc302cdd
put prefix in front of the filename, not the directory name
2012-08-03 13:14:51 +00:00
3d7bc40520
added output of defaults for mesh, points, and box to help
2012-08-02 13:22:57 +00:00
13caf2d389
made linear shape reconstruction working again, pretty similar results like corrected FFT reconstruction
2012-07-18 18:39:59 +00:00
b30584b8d7
added "()" to file.close command
2012-07-03 12:33:11 +00:00
925759000c
added option to select data separation character from a choice of:
...
newline
tab (default)
space
2012-06-19 16:00:59 +00:00
376ec2cd94
add option to output double, triple, and quadruple scalars
2012-06-19 15:30:16 +00:00
98b790004a
Adding Second Piola-Kirchhoff data Coloumns (addPK2).
...
Integrating Stress-Strain table Data numerically (integrate.py).
2012-06-12 14:09:16 +00:00
34ef08c762
added unique naming of output file
2012-05-07 20:36:58 +00:00
a84838d3ba
removed erroneous print statements (leftover from debugging)
2012-05-07 19:28:21 +00:00
c9e17319ec
now with correct ID and LF line endings... ;-)
2012-05-07 19:11:46 +00:00
361b7ad398
new script to generate a twoD probability density map from ASCIItable data
2012-05-07 19:09:11 +00:00
c2954a2b33
now all heading labels squeeze out whitespace from their name.
2012-05-05 18:43:48 +00:00
28e9b483ad
corrected wrong byte offset when reading thru 2^31-1-8 four-byte limit
2012-05-01 22:42:45 +00:00
99f2b8603a
new script for reconstruction of elements from F/IP(spectral_buildElements.py), corrected spectral_randomSeeding.py, made post/postResults.py aware of additional header/footer for file positions larger than 2**31-1
2012-04-24 15:09:20 +00:00
335df4346f
deleted accidentally checked in file
2012-04-19 11:52:01 +00:00
31753be16f
updated setup/setup_processing.py with new files
...
added data_readLine(LINE) and data_skipLines(LINES) for ascii table
2012-04-18 11:42:57 +00:00
17f644b261
new scripts to add deformed configuration to ASCII table and for generation of layered 2D geometries (EBSD)
...
addCompatibilityMismatch.py is now using functions from ASCII table library
2012-04-18 09:58:59 +00:00
33ab391c14
added total increment column
2012-03-14 15:05:49 +00:00
ac5b6233e6
initialize lastIncrement to 1
2012-03-14 14:59:20 +00:00
9b17015b5a
added option for nodal quantity output (uses "linear" translation).
...
improved stability when requesting non-existing increments.
2012-03-05 15:22:10 +00:00
dc7234fd02
new option "--suffix" adds a suffix to the filename
2012-02-28 14:24:45 +00:00
10e93244c1
writing info to stdout instead of stderr
2012-02-28 13:21:59 +00:00
fc40291f38
script to add a suffix to specified ASCIItable labels
2012-02-24 08:53:19 +00:00
53d7076d05
remove the info part from ASCIItables
2012-02-23 13:53:50 +00:00
a2b46c8a36
columns can be called by index
...
now pipe-aware...
2012-02-23 13:53:12 +00:00
d68a3d1869
added LF=UNIX to a bunch of files
2012-02-22 13:30:00 +00:00
ff4c281ed2
fixed whitelist/blacklist behavior (blacking out overrides whitelisting)
...
now broken pipes stop script's outputting.
2012-02-16 18:47:07 +00:00
a994b4bcc9
fixed problem when condition was empty
2012-02-16 18:00:40 +00:00
f2729255f8
changed name in install script, small corrections on regex
2012-02-16 15:15:43 +00:00
1bad5bf3c7
removed --count option. introduced 'internal' column #_row_#. adopted polished column head identification developed in filterTable. wiki updated.
2012-02-16 11:56:16 +00:00
9f45cb3745
new option: -c --count: count rows in ascii table and add column "row" with row number
2012-02-16 11:16:36 +00:00
edd5adafd0
now with ID and correct line endings...
2012-02-16 08:58:07 +00:00
37bd65ea34
script to filter an ASCIItable by condition. each row is evaluated against the condition, columns can be black- or white-listed (white wins)...
2012-02-16 08:36:35 +00:00
11d3c7a317
new spectra_parseLog searches through spectral log file and parses all possible output to an ascii table
2012-02-15 20:08:35 +00:00
b153a762cb
now using damask.core.math
2012-02-15 19:34:43 +00:00
bd32f1bf1a
adapting to current format of spectral out file
...
now using regular expressions to match "magic" lines
2012-02-15 12:07:00 +00:00
8671b8ed38
script to delete existing columns from ASCIItable
2012-02-14 12:04:37 +00:00
156ec4582a
polishing, adding _pInt etc. where applicable
...
post_results now handels zero increment different (like FEM, it is always there even if it is not counted)
2012-02-13 14:18:07 +00:00
3228cf563c
fixed bug when column was referenced multiple time in a formula.
...
changed column tagging character to '#' ('$' gave some trouble on the shell...)
2012-02-09 15:46:25 +00:00
0f7c74e02d
set ID flag and line endings
2012-02-09 13:06:22 +00:00
5a6cd1fc8f
slightly prettified handling of finite difference accuracy requesting
2012-02-08 12:01:38 +00:00
56ce779f57
generalized slip system idea of Christoph to field data of "special" dimension (i.e. not 3 or 9).
...
dropped "norm"-suffix from input names of norms.
ASCIItable output is now called "normType" with type being Abs, Frobenius, or Max...
2012-02-08 12:00:31 +00:00
282e4a0360
scripts now figure out dimension and resolution on their own...
2012-02-08 11:18:15 +00:00
9c35e4e148
small polishing of help output.
2012-02-08 09:12:08 +00:00
51e8981ba3
not specifying the location of python executable directly, but rather getting it from $path, otherwise the scripts won't work on every machine
2012-02-07 13:09:10 +00:00
2f07faa0e2
norm capable of using different p-norms (abs norm, frobenius norm, and max norm). also able to handle "slipsystem" outputs (use option -s). number of slip systems can be set by option -i, if not 12 is default.
2012-02-07 13:02:56 +00:00
bffc22fbe1
major restructuring. packing stencil can be shifted to allow for element or nodal value averaging.
2012-02-02 17:12:48 +00:00
9b679c3c0b
switched to damask include instead of outdated damask_tools
2012-01-31 13:08:25 +00:00
27a976c04f
changed to new structure (using damask module)
2012-01-26 12:46:38 +00:00
becb863110
added test for gfortran and gfortran vs intel, renamed intel test to new numbering scheme and changed to new div criterion
...
introduced "try" statement in lib/damask/test/test.py to avoid crash if a test variant fails
2012-01-25 15:14:31 +00:00
7869379d38
output directory (--dir) can now cope with absolute path...
2012-01-20 19:53:56 +00:00
076fef3323
now fully supports output of vector fields (needs POINT data for useful visualization!!)
2012-01-19 20:42:50 +00:00
b134ec7a39
adopted ASCIItable class and checked correctness of results.
2012-01-19 20:41:56 +00:00
7ed2c19d0f
switched importing from "msc_tools" to "damask"
...
patchFrom... now skips blank lines, has more commenting, treats (artificial) bi-crystal (somewhat) gracefully.
2012-01-16 09:32:36 +00:00
55639f3362
added log time scale capability for spectral results
2012-01-12 08:06:25 +00:00
9abf5a110d
changed from old DAMASK (f2py) module to new integrated damask tools
2012-01-06 10:41:23 +00:00
fbe908ccd2
now uses damask.core.math package
2011-12-22 10:42:24 +00:00
f463c2da70
added addCurl.py, not sure if it works correctly. still in old (eq. to addDivergence.py) style
2011-12-21 17:25:31 +00:00
3706bcbc3e
fixed bug
2011-12-20 14:19:01 +00:00
1194deff54
corrected leftover mistake (items --> table.data)
2011-12-15 10:53:20 +00:00
fb7adf7b89
adopted use of general damask package
2011-12-15 08:53:18 +00:00
609175318e
added option for output of colormap palette also as float values 0.0-1.0
2011-12-08 10:02:48 +00:00
ea0fe7b406
corrected 3D visualize (math.f90 part was not working)
...
small polishing of voronoi_tessellation.f90
2011-12-06 17:46:33 +00:00
5ebeb96e85
made DAMASK to work with gfortran:
...
-removed to long lines
-restructured f2py modules and merged make_DAMASK2Python into setup processing
-setup_code.py now sets library path in makefile and asks for compile switches for spectral code
-substituted \ in format strings with $
restructured DAMASK_spectral:
-more logical output and structure of code
-better input for spectral debug parameters
2011-12-06 16:58:17 +00:00
9d3f7b8d3d
adopted ASCII_TABLE class
2011-12-04 09:57:13 +00:00
42c3074821
mini calculator for column-column arithmetic
2011-12-02 15:15:36 +00:00
ace6851389
moved all routines from postprocessingMath to math.90, renamed the module to DAMASK, changed scripts and interfaces accordingly.
...
polished math.f90 (mainly added _pInt/_pReal and intent(in/out))
curl_fft is still a dummy function
2011-12-01 12:01:13 +00:00
e98590d850
adopted ASCII_TABLE class
2011-11-24 17:10:50 +00:00
18a09d7cff
corrected handling of STDIN|STDOUT
...
adopted ASCII_TABLE class
2011-11-24 14:48:02 +00:00
267b8ac30c
started to add curl calculation to postprocessingMath.f90
...
restructured colormap calculation. Algorithm is working now, but input/output still has to be done
2011-11-23 20:08:48 +00:00
48f8d4ccb5
exchanged logic now using ASCII_TABLE class...
2011-11-23 14:54:53 +00:00
f685bbba0e
exchanged location of "graincount" in user block.
...
now matches wiki entry:
1. homogenization block
2. grain block
(grain count
sub-block[s] of crystallite and constitutive)
2011-11-23 09:09:00 +00:00
e8f5996a96
renamed MSC_TOOLS.library_paths to libraryPath, since only single string is returned
2011-11-23 08:25:52 +00:00
21fcd0357e
now subsumed into general postResults functionality
2011-11-22 19:43:37 +00:00
75e20dffb7
corrected version conflict
2011-11-17 21:36:56 +00:00
09799b5b58
compile test is now at least compiling. still comparison to reference results has to be done
2011-11-11 15:06:33 +00:00
06176873e4
after a somewhat lengthy discussion with Philip about usability and developability and general file-naming philosophy we think that we found a compromise on the "to-dot-py or not-to-dot-py" issue:
...
symlinks in DAMASK_ROOT/bin do not carry the extension, but the source files do.
Hope that results in the maximum number of happy developers and users.
2011-11-09 15:37:45 +00:00
98513a4e0d
2011-11-07 18:27:33 +00:00
de96e99bca
corrected determination of restartRead from commandline (now done by FEsolving instead of DAMASK_spectral_interface)
...
recompiled fftw libraries with --enable-shared to make them work with f2py
added draft for compilation test of spectral solver
2011-11-07 18:25:10 +00:00
Christoph Kords