Philip Eisenlohr
7e330f1249
Merge branch '37-include-hdf5-routines' into 'development'
...
Resolve "Include HDF5 routines"
Closes #37
See merge request damask/DAMASK!37
2018-09-07 19:18:07 +02:00
Satyapriya Gupta
a16454f1f9
fixed missing propagation of dependent state variables
2018-09-06 16:48:28 -04:00
Martin Diehl
e70efd2608
inform about debug versions indenpendently of the solver
2018-09-06 16:49:39 +02:00
Martin Diehl
8324962123
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-09-06 16:26:46 +02:00
Martin Diehl
cf65aae92a
correct names
2018-09-01 06:49:03 +02:00
Philip Eisenlohr
6a64637ac3
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-31 11:23:25 -04:00
Philip Eisenlohr
3e81110830
tell user whether DEBUG version or not
2018-08-31 11:22:59 -04:00
Martin Diehl
3b88096cd7
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-31 11:09:52 +02:00
Martin Diehl
5330fb31ad
more verbose error message
2018-08-31 10:19:37 +02:00
Martin Diehl
f028e05298
guessing was not correctly set
2018-08-31 10:14:33 +02:00
Martin Diehl
3cb279b083
one more loop not needed
2018-08-31 10:03:15 +02:00
Martin Diehl
017563e061
one more loop not needed
2018-08-31 09:14:16 +02:00
Martin Diehl
c0ac05aa88
no need to use two loops
2018-08-31 09:12:50 +02:00
Martin Diehl
732022d4f0
functions from IO does not add any value here
...
only prevents the automated selection of a new unit
2018-08-31 08:58:13 +02:00
Martin Diehl
d18d74ae31
mechanics solver type is set only once
...
as all mech routines have the same interface, this leaner syntax can be
used
2018-08-31 08:20:23 +02:00
Martin Diehl
555ca8e5f1
debug statements not needed anymore
2018-08-30 17:21:22 +02:00
Martin Diehl
62413e8187
now compiles again
2018-08-30 17:18:56 +02:00
Martin Diehl
5f97ae9080
not used at the moment
2018-08-30 16:39:18 +02:00
Martin Diehl
cbecb71000
[skip sc] using explicit interface helps to get correct type
...
still some issues with different ranks and datatypes
2018-08-30 13:10:18 +02:00
Martin Diehl
b930c68887
PETSc 3.9 style (no SIGSEGVs anymore)
2018-08-30 12:38:44 +02:00
Martin Diehl
8b6bef159e
a little bit more verbose
2018-08-30 12:38:29 +02:00
Martin Diehl
3254ae79a5
collecting questions to Pratheek
2018-08-30 12:37:47 +02:00
Martin Diehl
d180af494e
adopted to new PETSc fortran interface
2018-08-30 11:55:13 +02:00
Martin Diehl
29e55d20fb
message better to understand and giving error instead of SIGSEGV
2018-08-30 09:42:45 +02:00
Martin Diehl
b96e01c128
Merge branch 'development' into lattice-builds-interaction
2018-08-30 05:41:40 +02:00
Martin Diehl
105c4077ad
Merge branch 'development' into 19-NewStylePhenopowerlaw
2018-08-30 00:58:54 +02:00
Martin Diehl
b163a8aaa0
Non-schmid activated again
...
internally, no need for long name plastic_phenopowerlaw_postResults
2018-08-30 00:57:15 +02:00
Martin Diehl
b884349e7b
only renaming
...
3333 not needed for dX_dY if X and Y are 3x3 tensors
PK2 stress is S not T according to the DAMASK paper
2018-08-29 13:16:37 +02:00
Martin Diehl
6d28883db5
starting to include non-Schmid terms (again)
2018-08-29 12:07:51 +02:00
Martin Diehl
922273f230
does not make sense to store and use the 6-vector version of the Schmid
...
matrix
2018-08-29 12:03:31 +02:00
Martin Diehl
baeb449e07
WIP: debugging
2018-08-29 11:44:39 +02:00
Martin Diehl
f2acc14882
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-29 08:27:15 +02:00
Martin Diehl
680c9e11d4
segmentation fault in cause of empty list
2018-08-29 08:26:28 +02:00
Martin Diehl
b5e4ad247d
LpAndItsTangent naming convention following DAMASK paper
2018-08-28 15:40:24 +02:00
Martin Diehl
fc3ce54667
return more than one tangent
2018-08-28 15:07:39 +02:00
Martin Diehl
15e2d4a7cd
Tstar is S
...
according to the DAMASK paper
2018-08-28 15:02:58 +02:00
Martin Diehl
4c14f988a3
rename according to paper
2018-08-28 14:58:17 +02:00
Martin Diehl
06e7156351
did not work for values <0
2018-08-28 12:41:21 +02:00
Martin Diehl
42f8b0a063
labels of slip and twin systems for more self-explanatory output
2018-08-28 12:27:56 +02:00
Martin Diehl
94695f773e
more verbose and works for arbitrary precision
2018-08-28 07:47:05 +02:00
Franz Roters
38fd517c44
Merge remote-tracking branch 'remotes/origin/36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading' into development
2018-08-27 15:13:16 +02:00
Martin Diehl
38a855243d
Merge branch 'development' into 43-wrong-stress-in-dotstate-and-deltastate
2018-08-27 06:31:45 +02:00
Martin Diehl
dd81fe806d
naming was not completely corrected
2018-08-27 06:30:55 +02:00
Martin Diehl
b11666effa
Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver
2018-08-26 13:59:50 +02:00
Martin Diehl
a5f139b786
unused variables
2018-08-26 11:53:18 +02:00
Martin Diehl
241b2ade8b
more portable way to define PI
...
https://software.intel.com/en-us/forums/intel-visual-fortran-compiler-for-windows/topic/490432
and compiler will not complain about truncation
2018-08-26 11:40:38 +02:00
Martin Diehl
0041d21777
output was screwed up
2018-08-26 06:20:48 +02:00
Martin Diehl
4f1becb503
cleaning and fixing bugs (wrong indices)
2018-08-25 21:27:14 +02:00
Martin Diehl
f458de82fa
simplified
2018-08-25 21:13:32 +02:00
Martin Diehl
3ff7c9c0eb
extendend to Schmid_twin
2018-08-25 20:55:15 +02:00
Martin Diehl
fbaac484ea
extended to postResults
2018-08-25 20:32:01 +02:00
Martin Diehl
780699740d
internal (non)-Schmid definitions also in dotState
2018-08-25 20:19:02 +02:00
Martin Diehl
ba9330c8dd
early rename
2018-08-25 20:08:46 +02:00
Martin Diehl
d51b00c2d3
no need to loop over families and systems independently. no need for 3333
2018-08-25 20:06:19 +02:00
Martin Diehl
d055ef665a
using only internal schmid and non schmid matrices
2018-08-25 20:01:39 +02:00
Martin Diehl
cc5d04ff2a
newly introduced parameters for non-schmid were confusing
2018-08-25 19:28:09 +02:00
Martin Diehl
5b3bed3e48
functionality to calculate SchmidMatrices
2018-08-25 18:32:55 +02:00
Martin Diehl
d3db0d816c
ordered by dimension and set private where possible
2018-08-25 17:29:20 +02:00
Martin Diehl
1c76e156d9
new symmetry handling will be handled in a different branch
2018-08-25 17:19:48 +02:00
Martin Diehl
bde242902b
Merge branch 'development' into 43-wrong-stress-in-dotstate-and-deltastate
2018-08-25 16:02:12 +02:00
Martin Diehl
b8b5bac684
dotState and deltaState parse Mstar instead of Tstar
...
requires to parse in Fi
2018-08-25 15:59:34 +02:00
Martin Diehl
22a232ad08
bug: memory access out of bounds
...
introduced when moderninzing reading in of parameters
2018-08-25 15:50:43 +02:00
Martin Diehl
7e002d1bfb
missing rename
2018-08-25 14:42:44 +02:00
Martin Diehl
e46605f0ef
forall is deprecated
2018-08-25 14:36:21 +02:00
Martin Diehl
17d88184a7
typos fixed
2018-08-25 14:35:49 +02:00
Martin Diehl
35688a6acf
temp33 not needed (compiler should be smart enough)
2018-08-25 14:29:03 +02:00
Martin Diehl
953fff79ac
prepared LpAndItsTangent to remove superflous forward-backward
...
conversion
updating the individual plastic laws will be done in the respective
branches
2018-08-25 14:21:06 +02:00
Martin Diehl
d585deee7e
unified syntax
...
_v for vector representation of tensor conflicts with 3333 suffix for
4-th order tensors.
General idea: Mark symmetric second order tensors in vector notation with
'6' and fourth order tensors in second order matrix notation with '99'.
Append nothing for 'natural' representation, i.e. F and NOT F33, Lp_dTstar and NOT
Lp_dTstar3333
2018-08-25 14:07:23 +02:00
Martin Diehl
025cbddd00
generic function and interfaces for slipSlip, twinTwin, transTrans
2018-08-25 13:08:32 +02:00
Martin Diehl
7ecb7689f1
Intel compiler failed with SIGSEV
...
derived types, pointers, finalize .... altogether seems to bring both Compilers to their limits.
I cannot see what was wrong before, but now it works and might be a little faster
2018-08-23 00:13:57 +02:00
Martin Diehl
271b9ba76b
intersting note ...
2018-08-22 23:28:47 +02:00
Martin Diehl
8c5f3d4e07
only needed once
2018-08-22 22:52:12 +02:00
Martin Diehl
51b4ef319a
HDF5 was not compiled due to missing dependency
2018-08-22 20:12:16 +02:00
Martin Diehl
dc596e6789
zero termination does not work
2018-08-22 18:09:17 +02:00
Martin Diehl
1a943df97e
small flaws
2018-08-22 17:52:00 +02:00
Martin Diehl
ab45818d51
seems to work now
...
anyway, nicer code
2018-08-22 14:30:51 +02:00
Martin Diehl
1b5623ad6c
avoid out of bound access, removed unneeded stuff
2018-08-22 14:22:37 +02:00
Martin Diehl
037ab3d081
getTag works now for tags with the same start and close tag
...
needed for '/echo/'. Still suggest to rather use /echo\
2018-08-22 13:10:59 +02:00
Martin Diehl
52088691d1
improved linked list and fixed solution for strange bug
...
Bug: Using automated LHS re-allocation for a string array that with global scope seems to cause trouble
Hence, "parse_file" works with a local string and assings only once to it
Linked_List: Now storing data in the list head also and last element is always empty.
Finalize allows simple handling of deallocation
2018-08-22 11:51:23 +02:00
Martin Diehl
52002f654e
to converge at one point to one (or two) string lenth values
2018-08-22 09:14:16 +02:00
Martin Diehl
0068dba40f
Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading
2018-08-22 09:11:33 +02:00
Martin Diehl
4d432e5462
Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver
2018-08-21 23:03:56 +02:00
Martin Diehl
0fa902100c
Merge branch 'development' into 39-simplify-obscure-numerics-integration-mode
2018-08-21 22:59:57 +02:00
Martin Diehl
61070fd908
Merge branch 'development' into 37-include-hdf5-routines
2018-08-21 22:46:30 +02:00
Martin Diehl
8de321382f
using final seems to be the better approach
...
http://www.training.prace-ri.eu/uploads/tx_pracetmo/AdvFTN_handout.pdf
still needs in-depth analysis, even though I cannot reproduce 'terminally ill'
2018-08-21 08:14:59 +02:00
Martin Diehl
d146417abe
hot fix for terminally ill with gfortran 7.3
...
might be a bug in the compiler or in the linked list.
waste some memory at the moment...
check linked list carefully before enabling again and blaming gfortran
2018-08-21 07:41:10 +02:00
Martin Diehl
465d950ab1
gfortran 7.3 and optimized code still gives 'terminally ill'
2018-08-21 07:09:50 +02:00
Martin Diehl
60f56255e4
[skip sc] [skip ci] simplified interfacing
2018-08-20 23:14:49 +02:00
Martin Diehl
69ad600916
more explicit file opening
...
still having trouble with Gfortran 7.3 and no numerics.config
2018-08-20 22:36:55 +02:00
Philip Eisenlohr
87a8a9536b
absTol for divergence was way too tight
2018-08-20 16:34:43 -04:00
Martin Diehl
c78396dd78
randomized FILEUNIT
...
matrix inversion error when numerics.config is not there or not present
very strange
2018-08-20 22:11:53 +02:00
Martin Diehl
e47677738a
more verbose error
2018-08-20 17:57:15 +02:00
Martin Diehl
031c59954f
working directory is changed automatically
2018-08-20 17:45:34 +02:00
Martin Diehl
29cd8fa5e2
Merge branch 'development' into 36-include-hdf5-routines
2018-08-20 17:35:32 +02:00
Martin Diehl
dbed7056e5
[skip sc] cleaning
2018-08-20 17:08:33 +02:00
Martin Diehl
93562d5142
mapping of elements etc not needed for PETSc-based FEM and spectral
...
solvers
2018-08-20 16:42:47 +02:00
Martin Diehl
e3e905938e
all elements are CP elements
2018-08-20 16:23:05 +02:00
Martin Diehl
3e4c878304
using shared interface for spectral and FEM solver
...
group_scalar seems inappropriate as integers are also scalars. renamed
to group_float (is actually usually of double precision).
think about better name, types should have a t prefix. tgroupFloat?
2018-08-20 16:09:40 +02:00
Martin Diehl
b8d56ae320
unfified interface for spectral and FEM solver
...
Note: extension to load case and geometry is not added automatically
anymore!
2018-08-20 15:59:13 +02:00
Martin Diehl
f29a5b3df3
not used at all
2018-08-20 13:15:44 +02:00
Martin Diehl
543c49426f
Merge branch 'development' into 38-introduce-rudimentary-PETSc-based-FEM-solver
2018-08-20 09:09:15 +02:00
Martin Diehl
3a097d1099
Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading
2018-08-20 09:04:28 +02:00
Martin Diehl
8fb780ab42
now compiles with gfortran
2018-08-20 09:01:13 +02:00
Martin Diehl
d6c69e3a18
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-18 23:17:07 +02:00
Martin Diehl
85358bae1b
copy and paste error
2018-08-18 21:30:57 +02:00
Martin Diehl
97659c359a
MPI write only in case that PETSc is used
2018-08-18 21:01:25 +02:00
Martin Diehl
3b3e0bc068
forgotten use
2018-08-18 17:11:50 +02:00
Martin Diehl
67314fc204
leftover from reducing numerics_integrator to scalar
...
postponed simplification to scalar because of heavy modification in plastic
constitutive laws
2018-08-18 16:42:32 +02:00
Martin Diehl
2618593568
:Merge branch 'development' into Integration-Mode-Confusion
2018-08-18 16:37:25 +02:00
Martin Diehl
f7c20d74af
compiles now, but most likely does not work
2018-08-18 15:58:42 +02:00
Martin Diehl
0d8f17cbe6
adjusting to PETSc 3.9.x
2018-08-18 14:05:57 +02:00
Philip Eisenlohr
c03ea8f5c7
added forgotten C66(2,2) read-in from parameter database
2018-08-17 15:43:09 -04:00
Philip Eisenlohr
62d2806fe1
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-17 14:59:00 -04:00
Martin Diehl
d4bcfae82b
WIP: adopting to PETSc 3.9.x and modifications in development branch
2018-08-17 12:00:44 +02:00
Martin Diehl
821860987c
copied existing files
2018-08-17 00:14:25 +02:00
Martin Diehl
26b08bc21b
Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading
2018-08-16 23:39:14 +02:00
Martin Diehl
b64b5b82de
integrationMode was always 1, very obscure code
...
was most likely the leftover of old functionality
2018-08-16 23:33:39 +02:00
Philip Eisenlohr
1493b33a03
fixed buggy state width assignment (endindex += %nSlip corrected to %totalNslip)
2018-08-14 01:07:06 +02:00
Philip Eisenlohr
66e68151ea
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-13 18:28:59 -04:00
Philip Eisenlohr
ba215ed9ea
small polish
2018-08-13 18:27:51 -04:00
Martin Diehl
5337fb1229
old runtime debugging leftovers
2018-08-05 11:08:17 +02:00
Martin Diehl
c0adb61350
outdated description
2018-08-05 10:41:01 +02:00
Martin Diehl
60fc47ca2a
unused import
2018-08-05 09:41:27 +02:00
Martin Diehl
fd578ab8eb
Merge branch 'development' into 19-NewStylePhenopowerlaw
2018-08-05 07:38:09 +02:00
Martin Diehl
386c3e7797
Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading
2018-08-05 06:04:33 +02:00
Martin Diehl
661636d83e
default values needed to suppress error in case of missing key
2018-08-04 22:53:56 +02:00
Martin Diehl
f522f79703
Merge branch 'development' into 35-new-style-of-reading-in-parameters-in-lattice
2018-08-04 22:42:14 +02:00
Martin Diehl
6a4260ac07
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-04 22:29:52 +02:00
Martin Diehl
9360c171a1
polished for merge
...
access to array(n+m:) is safe for array of size n with m>1
2018-08-04 19:39:50 +02:00
Martin Diehl
20d1264d07
small improvements
...
default case of error handling, checking for recursion limit, some
comments to also understand it later
2018-08-04 13:58:01 +02:00
Philip Eisenlohr
8edeeaf213
renaming of p_vec and friends to names based on "group"
2018-08-03 19:39:14 -04:00
Martin Diehl
8a32ed8747
calculating non-schmid related data only once
2018-08-03 23:03:51 +02:00
Martin Diehl
8c07825d7e
Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading
2018-08-03 22:21:37 +02:00
Martin Diehl
5b409fd6f7
type mismatch
2018-08-03 16:16:50 +02:00
Martin Diehl
f0645d84f5
not a target anymore
2018-08-03 15:10:38 +02:00
Martin Diehl
5cf2973715
naming reflect change from Piola-Kirchhoff to Mandel stress
...
not using the symmetrized stress anymore to avoid handling of
symmetrized Schmid matrizes. The time saved when calculating the double
contraction is probably anyway lost during the conversion from (3,3) to
(6) of Mstar
2018-08-03 14:53:40 +02:00
Martin Diehl
38183fdbf6
Merge branch 'development' into 36-faster-file-handling-for-material-config-use-stream-access-instead-of-line-wise-reading
2018-08-03 08:57:44 +02:00
Martin Diehl
dc6855261a
number of helper functions for HDF5
2018-08-03 08:53:37 +02:00
Martin Diehl
c2f9709567
leaner, most of it also supported by older gcc
2018-08-03 08:42:26 +02:00
Martin Diehl
af931a78c7
finalizing reading in
2018-08-03 08:09:28 +02:00
Martin Diehl
68c476f690
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-08-03 07:56:02 +02:00
Martin Diehl
0a6bde70c5
Merge branch 'development' into 19-NewStylePhenopowerlaw
2018-08-03 06:56:43 +02:00
Martin Diehl
5d09e98e02
checking with Philip
2018-08-03 01:14:18 +02:00
Martin Diehl
3cceda5fe3
Merge branch 'development' into 31_consistent_wd
2018-08-03 00:08:16 +02:00
Pratheek Shanthraj
bc3f6ae97c
missing bits in getStrings function
2018-07-31 23:15:44 +02:00
Martin Diehl
a908e66306
WIP: reading in new style
2018-07-30 11:58:59 +02:00
Martin Diehl
ed97afb51c
WIP: inherent definition instead of check, using new reading in functionality
2018-07-29 21:18:04 +02:00
Martin Diehl
5eed7d06e9
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-07-29 20:29:55 +02:00
Martin Diehl
449449b500
does the same as numpy.clip
2018-07-28 01:31:02 +02:00
Martin Diehl
e7fd445816
WIP: Simplifying
...
using maxval gives inherently correct values and a consistency check is not needed any more
using config_phase capabilities to read in lattice related data
2018-07-20 14:13:13 +02:00