a69aaa1315
Use scipy euclidean distance function instead of FMM (runs without skfmm
...
module installed)
2012-12-19 14:50:45 +00:00
260e4191a0
replaced tabs by spaces
2012-12-13 18:15:10 +00:00
dfb791bcaf
only complain about missing Mentat release if needed...
2012-12-12 08:33:42 +00:00
34645a7222
write warning about missing Mentat release to stderr instead of stdout
2012-12-12 08:21:59 +00:00
93d822aaa1
symmetric colormap always with pure white in the middle
2012-12-11 16:50:34 +00:00
726d1173e5
polishing
2012-12-07 17:46:28 +00:00
c4ef2e5925
bug fixes
2012-12-07 17:41:50 +00:00
eaf7072bc1
Vectorized checking of neighbourhood for unique microstructure
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(faster)
M addEuclideanDistance.py
2012-12-07 10:50:34 +00:00
89867a198c
forgot to adopt addEuclideanDistance into the auto-setup...
2012-12-06 21:51:30 +00:00
a37250eef4
script to add the Euclidean distance map from boundaries, triple lines, and quadruple points to an ASCIItable of a regular grid.
...
requires numpy, scipy, and skfmm...
2012-12-06 21:49:49 +00:00
2d4cf7da74
conditions can handle string data.
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use "#s#label#" format to indicate that column headed by "label" contains strings (not floats)...
2012-12-03 14:29:21 +00:00
7d96bb7ce8
Add column(s) containing directional stiffness based on given cubic stiffness values C11, C12, and C44 (in consecutive columns)
2012-12-03 13:10:16 +00:00
faa5f3c459
corrected severe bug in (non-logarithmic) strain calculations..!
2012-11-30 15:02:25 +00:00
72159e867c
fixed buggy file handling for multiple input files
2012-11-30 11:03:53 +00:00
74f62c891d
slightly safer file closing strategy
2012-11-30 08:38:52 +00:00
9fb838fd28
changed switch from "sequential" to "column"
2012-11-30 08:29:34 +00:00
1bd6bcfe3d
script to list info, labels, and/or data of an ASCIItable
2012-11-30 08:26:13 +00:00
e498719dcf
forgot to add to last commit
2012-11-29 21:57:07 +00:00
f63bb747c1
script to calculate the euclidean distance map (shortest distance to a grain boundary) of a given geom description using fast marching method (O(N logN) ops). grain boundary extracted using FD stencil.
2012-11-29 21:53:57 +00:00
f446d4d87e
added wildcard matching ( "?", "*", "[(!)sequence_of_characters]" ) for ASCII table labels
2012-11-29 10:42:13 +00:00
05507a6240
removed opening of unused _tmp file
2012-11-27 17:59:56 +00:00
255af58434
post processing script to add eigenvalues and eigenvectors to tensorial data in ASCII tables.
2012-11-23 21:49:30 +00:00
78c22d8449
corrected label in case of divergence of tensor, now using correct notation for scalar: divFFT(data) instead of 1_divFFT(data)
2012-11-21 10:31:52 +00:00
b5945ced5e
changed counting of rows from pythonic (starting at 0) to human way (starting at 1)
2012-11-20 10:27:09 +00:00
b988caa6ba
added script to add deviatoric and hydrostatic part of a tensor to ASCII table
2012-11-14 10:46:51 +00:00
c3926efd93
introduced logic to use gfortran as default if ifort is not found
2012-11-13 19:12:00 +00:00
1df9be233d
changed default threshold to 0.0
2012-11-08 17:08:41 +00:00
682a98b704
forgot to alter name of 'geom_fromAng' in setup script...
2012-11-08 16:29:26 +00:00
025d6c9048
renamed script to new convention
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aligned output behavior to that of fromVoronoiTessellation, i.e., standard output is geom, --config gives associated material.config stud
2012-11-08 15:44:51 +00:00
af2aa8500d
added option to specify crystallite index
2012-11-08 15:43:38 +00:00
c4c27860b2
renamed script
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updated to recent standard in io processing
introduced "primitive" bicontinuous structure in addition to "diamond" and "gyroid"
2012-11-07 16:52:10 +00:00
7cf2024be3
fixed buggy parameter checking
2012-11-07 16:51:17 +00:00
e11d107956
fixed reporting to STDOUT/STDERR
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fixed buggy parameter checking
2012-11-07 16:49:47 +00:00
cfc8823328
missed those three in former commit...
2012-11-05 21:28:01 +00:00
1bd4262cfb
renaming of (loosely related) "spectral" scripts to (more tightly related) "geom" versions.
2012-11-05 21:19:12 +00:00
1fc59107fa
removed debug statement in averageDown.py, deleted obsolete spectral_iterationCount.py (new solver will report statistics anyway and most probably the current count does not work as the screen output was modified)
2012-10-31 10:06:11 +00:00
afaf1f4e8c
made errors report to STDERR.
...
maxMicrostructure remains silent if not present.
2012-10-30 16:32:00 +00:00
f2229883b5
exchanged "maxGrainCount" for "maxMicrostructure", since this is what it really means...
2012-10-30 16:15:10 +00:00
ff164c9209
changed packing syntax from "N copies of x" to "N of x" (now consistent with IO.f90)
2012-10-30 15:53:46 +00:00
2d36d52cf7
changed packing syntax from "N copies of x" to "N of x" (now consistent with geomPack and IO.f90)
2012-10-30 15:47:11 +00:00
b9aa50c59a
improved performance for large packing values
2012-10-26 12:59:43 +00:00
868984cb89
import of damask.core will not complain any more if done in setup_processing.py, however setup_processing.py will check if core.so exist after compilation and delete it before compilation
2012-10-25 07:55:27 +00:00
17bfc3b284
added explanation of script purpose to its usage output (-h)
2012-10-18 07:24:44 +00:00
573c4702eb
fixed bug in averageDown.py and added test to check its features
2012-10-17 15:05:26 +00:00
dcff640926
fixed handling of given resolution and dimension
2012-10-17 10:04:13 +00:00
6c7affc43f
improved performance (hopefully)
...
now each new element gets a new ID, running from 1 to N for N elements
2012-10-16 18:06:02 +00:00
1004d744f2
output speed-up by *show_table/*show_model masking
2012-10-05 21:49:33 +00:00
c377dae9a6
added option to create hexagonal grid (2D slices only, according to P. Konijnenbergs experience on 3D ang)
2012-10-05 17:25:54 +00:00
124451ac1a
added missing comment sign #
2012-10-04 08:42:13 +00:00
0a961bef55
made test for spectral packing/unpacking working again, small fixes in the 2 scripts
2012-09-28 14:49:07 +00:00
6d97a92913
further improvements on the conversion, seems to work quite good for the 2D case now
2012-09-28 12:10:10 +00:00
6619717baf
improved the conversion of tables to ang files
2012-09-26 12:20:14 +00:00
5dbbb56460
fixed bug in 2D output format alignment.
2012-09-13 12:28:21 +00:00
77b2eef269
corrected wrong compiler option for gfortran in setup and updated naming scheme
2012-09-13 12:20:00 +00:00
b76fee325b
script to shift (physical) origin of geometry file and/or shift microstructure indices by fixed amount and substitute individual indices by other ones.
2012-09-13 10:12:00 +00:00
66e38606f0
syntax errors in one file terminated the script. now continues with next input...
2012-09-13 10:09:54 +00:00
1c0649e17a
syntax errors in one file terminated the script. now continues with next input...
2012-09-13 10:08:57 +00:00
8078585ce8
removed two left-over debug statements
2012-09-13 08:46:18 +00:00
3d14c5b234
functionality now subsumed into geomCanvas
2012-09-13 07:58:29 +00:00
4263191423
functionality now subsumed into geomCanvas
2012-09-13 07:57:57 +00:00
1fe202fd90
added $ID and line endings.
2012-09-13 07:56:45 +00:00
4f6e0eda32
splitter geom-file un/packing into two separate scripts.
2012-09-05 15:15:11 +00:00
dc55e30cf1
added "startingIncrement" to spectralOut result interpretation
2012-09-05 15:14:36 +00:00
b7dc9f9944
renamed spectral_buildElements.py to nodesFromCentroids.py and added first simple version of an ascii table to ang converter
2012-08-30 17:01:46 +00:00
73349d02f5
merged precision info into the file prec.f90 and removed prec_single.f90
...
precision information is now parsed as a makro, defined by the compiler, eg. -DFLOAT=8 for 8 byte long floats or -- in case no values is given -- for the FEM wrapper by the interface files.
Please don't forget to run setup_code.py !!!!!!!!!!!
abaqus_v6.env is adjusted to specify the standard precision (float=8, int=4) and got some extra compilation options, some deprecated warning supressors are removed
Optional Marc modification will follow that allow automatic selection of suitable precision
2012-08-28 16:08:17 +00:00
3f99d2bb65
further improved prefix handling
2012-08-27 09:39:57 +00:00
96ba5ecae4
moved some more 'mesh related' functions for post processing from math.f90 to mesh.f90
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f2py functions remaining in math.f90 now uses assumed size arrays in order to have simpler interfaces. This is only working with python 2.7!
changed python pre- and postprocessing scripts.
If you encounter any problems whith core modules, try to remove the old core.so in the lib/damask
2012-08-27 08:04:47 +00:00
975c3437ac
added possibility to use comma in functions, to prevent splitting substituted by ';'. Eg. round(4.021,1) becomes round(4.021;1) in command line call
2012-08-22 17:47:34 +00:00
4cfc302cdd
put prefix in front of the filename, not the directory name
2012-08-03 13:14:51 +00:00
3d7bc40520
added output of defaults for mesh, points, and box to help
2012-08-02 13:22:57 +00:00
a94b089aaa
removed old fortran brute force based tessellation
2012-07-26 09:07:24 +00:00
13caf2d389
made linear shape reconstruction working again, pretty similar results like corrected FFT reconstruction
2012-07-18 18:39:59 +00:00
95d292b286
2012-07-18 12:31:07 +00:00
117d06404d
cleaned up the script for setting up the postprocessing tools
2012-07-17 13:23:39 +00:00
b30584b8d7
added "()" to file.close command
2012-07-03 12:33:11 +00:00
783e1b50e2
condensed info parsing.
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added info to report new origin of grid (based on --offset).
2012-06-26 18:08:50 +00:00
fd3d592333
added capability to respect "origin" information in header
2012-06-26 18:07:38 +00:00
cd04f990c5
added $id$ property and LF ending
2012-06-26 17:20:16 +00:00
9041c5de39
fixed help texts
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killed full number range output option (use spectral_geomPack if needed)
2012-06-26 14:41:25 +00:00
2b5ff6a456
2 small corrections for header of geom file
2012-06-26 10:41:22 +00:00
9b76b47ef9
added missing extension causing invalid symlinking
2012-06-26 10:25:39 +00:00
baacbe3b11
added ifort as standard compiler, compilation is now done in DAMASK_ROOT
2012-06-25 09:06:09 +00:00
77ee33ec1f
script to changes the (three-dimensional) canvas of a spectral geometry description
2012-06-21 12:57:14 +00:00
06bfce0cd3
forgot to add the updated spectral_geomMultiply...
2012-06-20 17:06:28 +00:00
01a9290567
deleted old incarnation...
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new script follows established option parsing.
can rescale (increase only) the number of grid points in any dimension (with or without concurrent dimension scaling).
2012-06-20 16:00:48 +00:00
1105824562
new option to not rescale patch (set size = 0)
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added "3 header" to file output
will now extrude for spectral grids
2012-06-20 15:58:43 +00:00
925759000c
added option to select data separation character from a choice of:
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newline
tab (default)
space
2012-06-19 16:00:59 +00:00
376ec2cd94
add option to output double, triple, and quadruple scalars
2012-06-19 15:30:16 +00:00
c36a73c142
added include path for library files
2012-06-18 12:18:06 +00:00
a02dc204cc
added identifier for spectral solver when compiling post processing tools to setup/setup_processing.py
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test with intel compiler now uses ikml
2012-06-13 17:45:18 +00:00
dfc8606207
boundary conditions now consider patch dimension along pulling direction (used to be orthogonal to that..!)
2012-06-13 09:28:59 +00:00
98b790004a
Adding Second Piola-Kirchhoff data Coloumns (addPK2).
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Integrating Stress-Strain table Data numerically (integrate.py).
2012-06-12 14:09:16 +00:00
1c427e8642
loop corrected
2012-05-14 07:58:21 +00:00
542768d712
bug fixed
2012-05-11 08:36:42 +00:00
c962452cda
python version of voronoi_tessellation.f90 generating geom file and material_config file (using kd_tree nearest neighbor search)
2012-05-10 16:42:07 +00:00
c752dd5474
regridding is now working, changed the subroutine into a function
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changed order of arrays in nearest neighbor search to make it fortran fast
constitutive.f90 and homogenization.f90 write state size out during initialization
setup/setup_processing.py is using byterecl to be compatible with binary files written out by solver
2012-05-08 14:57:06 +00:00
34ef08c762
added unique naming of output file
2012-05-07 20:36:58 +00:00
a84838d3ba
removed erroneous print statements (leftover from debugging)
2012-05-07 19:28:21 +00:00
c9e17319ec
now with correct ID and LF line endings... ;-)
2012-05-07 19:11:46 +00:00
361b7ad398
new script to generate a twoD probability density map from ASCIItable data
2012-05-07 19:09:11 +00:00
c2954a2b33
now all heading labels squeeze out whitespace from their name.
2012-05-05 18:43:48 +00:00
b4775249e8
corrected standard check to make f2py working with gfortran
2012-05-03 17:12:36 +00:00
0cb983606f
spectral_geomPack is now formatting depending on necessary digits (via additional header information)
2012-05-02 13:44:12 +00:00
28e9b483ad
corrected wrong byte offset when reading thru 2^31-1-8 four-byte limit
2012-05-01 22:42:45 +00:00
b87b2160e7
fixed bug occurring for one item lines.
...
shortened logic here and there.
2012-04-25 13:53:56 +00:00
99f2b8603a
new script for reconstruction of elements from F/IP(spectral_buildElements.py), corrected spectral_randomSeeding.py, made post/postResults.py aware of additional header/footer for file positions larger than 2**31-1
2012-04-24 15:09:20 +00:00
f74b16051b
autodetection of line length for geomPack, updated description for both files
2012-04-24 11:31:18 +00:00
14356bf35e
new pre processing script for interpretation of "copies of" and "to" in geom files
2012-04-23 12:46:38 +00:00
335df4346f
deleted accidentally checked in file
2012-04-19 11:52:01 +00:00
31753be16f
updated setup/setup_processing.py with new files
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added data_readLine(LINE) and data_skipLines(LINES) for ascii table
2012-04-18 11:42:57 +00:00
17f644b261
new scripts to add deformed configuration to ASCII table and for generation of layered 2D geometries (EBSD)
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addCompatibilityMismatch.py is now using functions from ASCII table library
2012-04-18 09:58:59 +00:00
997933e495
corrected setup for new names of files
2012-04-16 15:01:29 +00:00
f20cecd421
integrated subroutine for regridding into mesh.f90 and made it available for python
2012-04-10 15:15:46 +00:00
d638c563af
reworked python - fortran interfacing
2012-04-10 13:30:34 +00:00
a3b37356be
added svn flags
2012-03-31 12:42:49 +00:00
c29ae95af7
new version of AL spectral solver (seems to work, but still experimental)
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new concept of DAMASK for Python: Now using also IO.f90, debug.f90 etc. instead of mimicing their necessary function. This needs DAMASK_python.f90 and DAMASK_python_interface.f90 (At the moment more or less copies of respective spectral files).
polished and renamed the scripts for converging ang files
renamed voronoi_randomSeeding.py to spectral_randomSeeding.py
2012-03-29 19:54:31 +00:00
30d38436c7
switched voronoi seeding to python
2012-03-29 16:41:23 +00:00
4a6cdcc2e2
moved and renamed tools for generating geom file from ang files. using python instead of c++ for hex2cub conversion
2012-03-27 17:47:39 +00:00
3816adac27
removed batch processing (easier done on command line) and changed interactive question for filename to cmd argument
2012-03-21 17:58:11 +00:00
33ab391c14
added total increment column
2012-03-14 15:05:49 +00:00
ac5b6233e6
initialize lastIncrement to 1
2012-03-14 14:59:20 +00:00
d2051e54a5
PBC meshing can work on 2D models
2012-03-14 13:40:22 +00:00
95a2ed3443
added ability to add "damask option" to input file
2012-03-13 14:08:09 +00:00
9b17015b5a
added option for nodal quantity output (uses "linear" translation).
...
improved stability when requesting non-existing increments.
2012-03-05 15:22:10 +00:00
dc7234fd02
new option "--suffix" adds a suffix to the filename
2012-02-28 14:24:45 +00:00
10e93244c1
writing info to stdout instead of stderr
2012-02-28 13:21:59 +00:00
fc40291f38
script to add a suffix to specified ASCIItable labels
2012-02-24 08:53:19 +00:00
89176ae7f1
added "deleteInfo" to list of symLinks
2012-02-23 13:56:50 +00:00
53d7076d05
remove the info part from ASCIItables
2012-02-23 13:53:50 +00:00
a2b46c8a36
columns can be called by index
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now pipe-aware...
2012-02-23 13:53:12 +00:00
d68a3d1869
added LF=UNIX to a bunch of files
2012-02-22 13:30:00 +00:00
ff4c281ed2
fixed whitelist/blacklist behavior (blacking out overrides whitelisting)
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now broken pipes stop script's outputting.
2012-02-16 18:47:07 +00:00
a994b4bcc9
fixed problem when condition was empty
2012-02-16 18:00:40 +00:00
f2729255f8
changed name in install script, small corrections on regex
2012-02-16 15:15:43 +00:00
1bad5bf3c7
removed --count option. introduced 'internal' column #_row_#. adopted polished column head identification developed in filterTable. wiki updated.
2012-02-16 11:56:16 +00:00
9f45cb3745
new option: -c --count: count rows in ascii table and add column "row" with row number
2012-02-16 11:16:36 +00:00
edd5adafd0
now with ID and correct line endings...
2012-02-16 08:58:07 +00:00
37bd65ea34
script to filter an ASCIItable by condition. each row is evaluated against the condition, columns can be black- or white-listed (white wins)...
2012-02-16 08:36:35 +00:00
11d3c7a317
new spectra_parseLog searches through spectral log file and parses all possible output to an ascii table
2012-02-15 20:08:35 +00:00
b153a762cb
now using damask.core.math
2012-02-15 19:34:43 +00:00
bd32f1bf1a
adapting to current format of spectral out file
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now using regular expressions to match "magic" lines
2012-02-15 12:07:00 +00:00
8671b8ed38
script to delete existing columns from ASCIItable
2012-02-14 12:04:37 +00:00
156ec4582a
polishing, adding _pInt etc. where applicable
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post_results now handels zero increment different (like FEM, it is always there even if it is not counted)
2012-02-13 14:18:07 +00:00
3228cf563c
fixed bug when column was referenced multiple time in a formula.
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changed column tagging character to '#' ('$' gave some trouble on the shell...)
2012-02-09 15:46:25 +00:00
a329a9b91d
added flags for ifort and gfortran to use preprocessor
2012-02-09 13:30:59 +00:00
0f7c74e02d
set ID flag and line endings
2012-02-09 13:06:22 +00:00
5a6cd1fc8f
slightly prettified handling of finite difference accuracy requesting
2012-02-08 12:01:38 +00:00
56ce779f57
generalized slip system idea of Christoph to field data of "special" dimension (i.e. not 3 or 9).
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dropped "norm"-suffix from input names of norms.
ASCIItable output is now called "normType" with type being Abs, Frobenius, or Max...
2012-02-08 12:00:31 +00:00
282e4a0360
scripts now figure out dimension and resolution on their own...
2012-02-08 11:18:15 +00:00
9c35e4e148
small polishing of help output.
2012-02-08 09:12:08 +00:00
51e8981ba3
not specifying the location of python executable directly, but rather getting it from $path, otherwise the scripts won't work on every machine
2012-02-07 13:09:10 +00:00
2f07faa0e2
norm capable of using different p-norms (abs norm, frobenius norm, and max norm). also able to handle "slipsystem" outputs (use option -s). number of slip systems can be set by option -i, if not 12 is default.
2012-02-07 13:02:56 +00:00
bffc22fbe1
major restructuring. packing stencil can be shifted to allow for element or nodal value averaging.
2012-02-02 17:12:48 +00:00
9b679c3c0b
switched to damask include instead of outdated damask_tools
2012-01-31 13:08:25 +00:00
27a976c04f
changed to new structure (using damask module)
2012-01-26 12:46:38 +00:00
becb863110
added test for gfortran and gfortran vs intel, renamed intel test to new numbering scheme and changed to new div criterion
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introduced "try" statement in lib/damask/test/test.py to avoid crash if a test variant fails
2012-01-25 15:14:31 +00:00
7869379d38
output directory (--dir) can now cope with absolute path...
2012-01-20 19:53:56 +00:00
076fef3323
now fully supports output of vector fields (needs POINT data for useful visualization!!)
2012-01-19 20:42:50 +00:00
b134ec7a39
adopted ASCIItable class and checked correctness of results.
2012-01-19 20:41:56 +00:00
acf7c86531
respect existing symbolic link to core.so (necessary since different workstation have different system setup..!)
2012-01-19 20:41:08 +00:00
ae6abedee7
set makefile line endings.
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small output polish in patchFrom...
2012-01-16 16:06:41 +00:00
447e181f55
fixed rounding problems with nodal coordinates
2012-01-16 16:05:02 +00:00
7ed2c19d0f
switched importing from "msc_tools" to "damask"
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patchFrom... now skips blank lines, has more commenting, treats (artificial) bi-crystal (somewhat) gracefully.
2012-01-16 09:32:36 +00:00
8584532205
corrected '-o <file>' syntax: now with space in between.
2012-01-12 13:46:35 +00:00
55639f3362
added log time scale capability for spectral results
2012-01-12 08:06:25 +00:00
6163896531
$ID$ was not active so far...
2012-01-11 20:18:47 +00:00
9abf5a110d
changed from old DAMASK (f2py) module to new integrated damask tools
2012-01-06 10:41:23 +00:00
159c8cad89
corrected directories for linking
2012-01-06 10:41:01 +00:00
8b572ff4c5
translating command line options for compiler name to actual name of executable
2012-01-06 10:00:22 +00:00
dd1e968908
setup_processing.py uses damask module but builds the core part of it, therefore made the use damask.core optional by setting a try statement in __init__.py and a "from damask import xxx"
2012-01-04 11:06:24 +00:00
fbe908ccd2
now uses damask.core.math package
2011-12-22 10:42:24 +00:00
35bd460e39
added "core" package capability to processing
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(renamed former f2py modules)
reverted pathinfo...
2011-12-22 10:36:59 +00:00
f463c2da70
added addCurl.py, not sure if it works correctly. still in old (eq. to addDivergence.py) style
2011-12-21 17:25:31 +00:00
3706bcbc3e
fixed bug
2011-12-20 14:19:01 +00:00
8d5dcc97bd
added geomCrop to crop a box out of a geom file
2011-12-20 13:33:16 +00:00
1194deff54
corrected leftover mistake (items --> table.data)
2011-12-15 10:53:20 +00:00
fb7adf7b89
adopted use of general damask package
2011-12-15 08:53:18 +00:00
609175318e
added option for output of colormap palette also as float values 0.0-1.0
2011-12-08 10:02:48 +00:00
2ceb78c337
introduced new damask_tools method "relPath" and adopted it in setup_processing.py and setup_code.py
2011-12-06 18:38:03 +00:00
ea0fe7b406
corrected 3D visualize (math.f90 part was not working)
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small polishing of voronoi_tessellation.f90
2011-12-06 17:46:33 +00:00
5ebeb96e85
made DAMASK to work with gfortran:
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-removed to long lines
-restructured f2py modules and merged make_DAMASK2Python into setup processing
-setup_code.py now sets library path in makefile and asks for compile switches for spectral code
-substituted \ in format strings with $
restructured DAMASK_spectral:
-more logical output and structure of code
-better input for spectral debug parameters
2011-12-06 16:58:17 +00:00
9d3f7b8d3d
adopted ASCII_TABLE class
2011-12-04 09:57:13 +00:00
42c3074821
mini calculator for column-column arithmetic
2011-12-02 15:15:36 +00:00
148f57b86d
changed it to work with changes in last commit
2011-12-01 12:02:36 +00:00
ace6851389
moved all routines from postprocessingMath to math.90, renamed the module to DAMASK, changed scripts and interfaces accordingly.
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polished math.f90 (mainly added _pInt/_pReal and intent(in/out))
curl_fft is still a dummy function
2011-12-01 12:01:13 +00:00
e98590d850
adopted ASCII_TABLE class
2011-11-24 17:10:50 +00:00
18a09d7cff
corrected handling of STDIN|STDOUT
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adopted ASCII_TABLE class
2011-11-24 14:48:02 +00:00
267b8ac30c
started to add curl calculation to postprocessingMath.f90
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restructured colormap calculation. Algorithm is working now, but input/output still has to be done
2011-11-23 20:08:48 +00:00
48f8d4ccb5
exchanged logic now using ASCII_TABLE class...
2011-11-23 14:54:53 +00:00
f685bbba0e
exchanged location of "graincount" in user block.
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now matches wiki entry:
1. homogenization block
2. grain block
(grain count
sub-block[s] of crystallite and constitutive)
2011-11-23 09:09:00 +00:00
e8f5996a96
renamed MSC_TOOLS.library_paths to libraryPath, since only single string is returned
2011-11-23 08:25:52 +00:00
21fcd0357e
now subsumed into general postResults functionality
2011-11-22 19:43:37 +00:00
75e20dffb7
corrected version conflict
2011-11-17 21:36:56 +00:00
09799b5b58
compile test is now at least compiling. still comparison to reference results has to be done
2011-11-11 15:06:33 +00:00
5aacb6032c
removed outdated comments
2011-11-09 18:04:51 +00:00
44e5d25274
now aware of $DAMASK_BIN and guessing if environment missing
2011-11-09 17:51:00 +00:00
41b8232695
setup_shellrc now adds $DAMASK_ROOT/bin to the $PATH
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in setup/setup_processing.py uncomment 3 lines to remove the links from your ~/bin
2011-11-09 16:20:52 +00:00
06176873e4
after a somewhat lengthy discussion with Philip about usability and developability and general file-naming philosophy we think that we found a compromise on the "to-dot-py or not-to-dot-py" issue:
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symlinks in DAMASK_ROOT/bin do not carry the extension, but the source files do.
Hope that results in the maximum number of happy developers and users.
2011-11-09 15:37:45 +00:00
98513a4e0d
2011-11-07 18:27:33 +00:00
de96e99bca
corrected determination of restartRead from commandline (now done by FEsolving instead of DAMASK_spectral_interface)
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recompiled fftw libraries with --enable-shared to make them work with f2py
added draft for compilation test of spectral solver
2011-11-07 18:25:10 +00:00
ba63d3231f
fixed string include
2011-11-04 10:27:41 +00:00
9e3d7d7d6c
made $DAMASK_ROOT definition optional
2011-11-03 13:51:54 +00:00
b9647b2584
moved parts into new "lib" folder
2011-11-03 13:21:11 +00:00
aba7937845
now uses msc_tools method to figure out Mentat path
2011-11-03 13:16:00 +00:00
edb8c0cd1e
no part of "lib/pathinfo"
2011-11-03 13:00:39 +00:00
b5e6b754fb
starting "lib" subfolder for shared goodies.
2011-11-03 12:19:26 +00:00
db12869c16
shifted back to main folder. small polish.
2011-11-03 12:18:07 +00:00
b847db969a
changed "texture" to more correct "structure"
2011-11-03 12:07:41 +00:00
4e8f36a133
remove $ID$ from first line (I am wondering how this could work...)
2011-11-02 18:49:53 +00:00
680ba9082f
removed deadlock when calling IO_warning(33)
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polished IO_error and IO_warning
checked OpenMP critical statements in DAMASK_spectral.f90
corrected writing of headed in DAMASK_spectral.f90
2011-11-02 14:38:42 +00:00
447e69019c
Introduced environment variable DAMASK_ROOT.
...
It is set in the DAMASK root folder by running damask_env.sh
Much needed in the testing routines so far (try ./testing/run_tests.py)
damask_env.sh could also trigger other scripts to get to a working setup after fresh checkout. For example it could run
./processing/setup/setup_processing.py
./code/setup/setup_code.py
if it finds that we have a fresh checkout.
2011-10-27 17:55:42 +00:00
7642509a47
first working draft of automated code testing, run_tests.py assumes DAMASK is located under ~/DAMASK/
2011-10-24 16:24:15 +00:00
e7a60988a1
modified exit number extraction
2011-10-24 13:02:08 +00:00
93b2160c2f
extract exit number from MSC out-file. Other MSC utility functions can also go into MSC_TOOLS class.
2011-10-24 12:59:46 +00:00
414bacb096
deleted unused vars. changed linking library info/path
2011-10-20 12:47:57 +00:00
ed08dfc2be
added option to select between cell-centered (as before) or vertex-centered data
2011-10-20 12:29:59 +00:00
c78227cec1
added option to skip data points along x,y,z in case they are periodic images. relevant for vertex-centered data for which outer surface data is doubled, i.e. data(0,0,0) == data(Nx,Ny,Nz)
2011-10-20 12:28:39 +00:00
3a0911ca89
added option to output RGB palette on terminal
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number of colors is now variable (default 32)
warning issued if MSC path not valid
new "redblue" sym colormap
2011-10-20 11:59:15 +00:00
96223ddf39
corrected for-loop index bug. two-dim output is now optional.
2011-10-14 23:43:45 +00:00
708b4d2eca
seed-file header format corrected, setup script now contains minimalSurface and vicinityOffset. removed .exe from compile output
2011-10-14 22:39:58 +00:00
ba0488638b
alter a spectral geom file such that any voxel that sees within a given vicinity a different microstructure than itself gets offset by a given value. this allows to identify/isolate grain boundary regions...
2011-10-11 17:35:53 +00:00
98c9bf9c15
generates spectral geom file for (currently) gyroid or diamond minimal surfaces. Inside and outside of a given threshold value are distinguished by microstructure 1 and 2.
2011-10-11 17:30:55 +00:00
ffc6442098
can now deal with arbitrarily long lines for microstructure definition. useful for 2D ASCII representation of grain morphology in the geom file.
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additional internal code reworking.
2011-10-11 17:25:22 +00:00
c7c541f393
corrected typos and such
2011-09-13 15:57:58 +00:00
d235de1aa5
added two small (quick and dirty) tools to convert data from EBSD to input files for spectral method, put them together with patchFromReconstructedBoundaries into new folder.
2011-09-13 15:46:44 +00:00
b412239d9f
reflects new output format of DAMASK_spectral to find
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*** Loadcase...
lines.
2011-09-05 13:39:44 +00:00
48ac3956ce
added '\n' escaping of ID string in VTK header
2011-09-05 13:38:10 +00:00
f458f026db
forgot to include string module, too
2011-09-05 08:54:29 +00:00
0ac5109c94
forgot to include string module
2011-09-05 08:50:36 +00:00
4eb8e25b6d
no fitting recent file renames
2011-08-26 12:25:11 +00:00
f3c2547fba
name change to better reflect what happens: comparison between local deformation field and a (necessarily compatbile) geometry reconstructed from the whole deformation field.
2011-08-26 07:17:35 +00:00
eb0ce3992b
debugging of addDebugInformation (now working, but not tested in detail)
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Added Id to postprocessingMath
2011-08-25 18:18:38 +00:00
7aba05ed9f
reworked to match former script layouts and logics. (not yet tested, use at your own risk)
2011-08-25 17:55:36 +00:00
282d2d7b97
corrected wrong Id tag
2011-08-25 16:47:12 +00:00
bbee6c4658
forget to check in addDebugInformation
2011-08-25 16:44:36 +00:00
a5f176cf18
put divergence calculation using FDM to postprocessingMath, added divergence calculation using differentation in Fourier space to postprocessingMath
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added functions to calculate the shape and volume mismatch of compatible and non-compatible geometry reconstruction to postprocessingMath. They can be accessed using addDebugInformation
2011-08-25 15:31:05 +00:00
cc3bc4a216
made handling of unknown dimension (i.e. resolution ==1) the same as for preprocessing (last commit)
2011-08-25 15:28:33 +00:00
272f7cc655
added auto scaling of dimension to voronoi_tessellation.f90. If dimension(i) == 0, it will get the smallest step of the remaining dimensions in that direction. Same is now done by patchFromReconstructedBoundaries
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setup_processing.py now gives executables the extension *.exe and removes the old executables before compiling
2011-08-25 12:16:06 +00:00
39b97f7b67
added new script "spectral_scaleGeom"
2011-08-19 13:32:27 +00:00
2dd8a353bb
now also works for single stepped loadcases, too
2011-08-19 10:03:42 +00:00
483234047c
renamed to be consistent with other file names
2011-08-19 07:53:35 +00:00
878ea443d6
added options to control written output (mesh(default), box, points) and to control reconstruction. --undeformed does not calculate average deformation of ve, --scaling controls the scaling of the fluctuation. Default is 1.0, with 0.0 no fluctuations are shown
2011-08-19 07:33:22 +00:00
589666d19e
added python script to simply (without antialising) scale a given *.geom file
2011-08-19 07:29:50 +00:00
def056f30f
added $Id$ escaping
2011-08-18 08:00:19 +00:00
10493ea8b0
added $Id$ login name escaping
2011-08-18 07:53:07 +00:00
164da22730
added some warnings if Mentat or PIL cabability missing
2011-08-18 07:52:07 +00:00
ff3bac2496
does not double size of 2D data for spectral method any more
2011-08-17 16:06:50 +00:00
3298e6821b
added forgotten "averageDown" script to list of shortcuts
2011-08-16 18:20:52 +00:00
bedce496a8
deleted unused option "dimension" since this is figured out by parsing the respective spectral or geom input files anyway.
2011-08-15 08:34:55 +00:00
e851c934ee
interrogate output from DAMASK_spectral for "error divergence:" evolution.
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results in an ASCII datafile containing the increment counter with corresponding divergence value. the evolution within an increment i is stretched between i and i+1 (and likely jumps then for the next increment i+1 at the value i+1)
2011-08-14 10:44:15 +00:00
Pratheek Shanthraj