Martin Diehl
afb9a2186b
removed explicit default setting: type='string' and action='store'
2014-09-12 14:14:55 +00:00
Martin Diehl
9ba7851c14
fixed bug in calculation of spherical part. Variables in python functions are intent(inout) in Fortran language!
2014-09-12 13:13:05 +00:00
Martin Diehl
5f986f3d54
updated to contain latest python improvements
2014-09-10 16:14:37 +00:00
Philip Eisenlohr
5a159dcdfa
script to add scalar data and/or RGB color tuples to rectilinear VTK file (*.vtr)
2014-09-05 20:28:39 +00:00
Tias Maiti
e286cf4c74
fixed bug "theTable" instead of "table"
2014-09-03 14:53:12 +00:00
Tias Maiti
b566eed5a8
fixed error in last commit
2014-08-28 18:50:48 +00:00
Tias Maiti
5d96f62b44
fixed bug "theTable" instead of "table"
2014-08-28 17:37:27 +00:00
Martin Diehl
6cdcdecdfa
post processing scripts are working again.
...
@Philip: definining one offset for shiftData and one factor for scaleData for tensor/vector/special>1 seems to be more reasonable than per component
2014-08-25 21:13:39 +00:00
Martin Diehl
d93c40a3dd
fixed small bug ('theTable' instead of 'table') and simplified
2014-08-25 12:53:11 +00:00
Martin Diehl
1ba7cbb046
fixed small bug ('theTable' instead of 'table') and simplified
2014-08-25 12:39:12 +00:00
Martin Diehl
c7837e1f66
changed manual input/output close to class method
2014-08-22 16:58:53 +00:00
Philip Eisenlohr
99e3c9a397
fixed (potentially) buggy rotation of tensors. convention is:
...
with A v = b
v' = R v
A' = R A R^T
such that
A' v' = R A R^T R v = R A v (= R b = b', i.e. old result transformed into other coordinate basis)
2014-08-22 15:32:48 +00:00
Philip Eisenlohr
df27115472
extended "scalar" capabilities to "special" having arbitrary dimension (defaults to 1, i.e. former scalar case). Breaks backward compatibility since "--scalar" is now "--special". However, "-s" still works as before...
2014-08-22 15:25:51 +00:00
Philip Eisenlohr
9d26bfa375
try to go on despite crappy data (containing dead ends in the segment network)
2014-08-21 17:23:16 +00:00
Philip Eisenlohr
77df55c998
extended "scalar" capabilities to "special" having arbitrary dimension (defaults to 1, i.e. former scalar case). Breaks backward compatibility since "--scalar" is now "--special". However, "-s" still works as before...
2014-08-21 17:16:43 +00:00
Philip Eisenlohr
9aa22d4a08
simplified column key generation
2014-08-21 16:17:23 +00:00
Philip Eisenlohr
96b16dd97b
reshape "matrix" input data from (currently wrong) 9x1 to 3x3 layout.
...
simplified input validity check.
2014-08-21 16:14:06 +00:00
Philip Eisenlohr
0bcd508298
added new option "no-data" to omit output of microstructure data field, i.e. generates plain mesh only
2014-08-21 16:01:11 +00:00
Tias Maiti
b573d06c3f
fixed bug where initial microstructure array was allocated (factor 2) too large in anticipation of later 2D tiling.
2014-08-18 21:32:53 +00:00
Martin Diehl
c6eab9dab7
fixed wrong order in linear interpolation for stress
2014-08-18 20:09:09 +00:00
Martin Diehl
e637f6344c
added possibility to fit to more than one yield point, now using linear interpolation between around given threshold value
2014-08-18 18:21:36 +00:00
Martin Diehl
ad7fe1ecbc
fixed bug (wrong index in stress tensor for Hill48) and possible deadlock
2014-08-10 21:22:22 +00:00
Martin Diehl
15a6015bc2
added some more post processing tests
...
DAMASK env now reports in MiB (GiB is too big for small machines)
2014-08-07 16:51:26 +00:00
Martin Diehl
df50707445
fixed some small flaws
2014-08-07 16:16:02 +00:00
Martin Diehl
c8f16f16fa
fixed bug in hill criterion
2014-08-06 20:07:47 +00:00
Martin Diehl
649e637561
added some more post processing tests and improved output
2014-08-06 19:06:33 +00:00
Martin Diehl
938352d43a
fixed calculation of size and dimension in case of 2D (was limited to third dim only)
...
plus polishing
2014-08-06 15:25:18 +00:00
Martin Diehl
cbafad50d0
some more work on the postprocessing scripts, decreased test tolerance because spectral decomposition has rounding errors (depending on machine/python/numpy version)
2014-08-06 13:27:09 +00:00
Martin Diehl
96fe818f5d
added more options to command line
2014-08-05 14:29:36 +00:00
Martin Diehl
b4b9835d18
some work on the yield surface generator
2014-08-04 21:15:56 +00:00
Martin Diehl
a0f9865133
updated to state-of-the art file handling etc
2014-08-04 20:07:20 +00:00
Martin Diehl
0874ebe096
new script to name abaqus output like in for marc.
...
written by B Bode from University of Kassel
2014-08-04 18:41:44 +00:00
Martin Diehl
7df8f04f65
updated test for postprocessing and improve some of the scripts
2014-08-04 17:53:41 +00:00
Tias Maiti
5556dad13f
updated to latest ASCII table handling style
2014-07-28 15:34:11 +00:00
Martin Diehl
0b93e7c5a5
corrected addDivergence script. Restarting still not working for new state, needs further investigations: tightend tolerances again
2014-07-27 09:43:00 +00:00
Tias Maiti
e01630e073
fixed bug in tuple assignment
2014-07-25 17:49:22 +00:00
Philip Eisenlohr
bee6e0b09b
added optional weighting column
2014-07-25 16:38:04 +00:00
Martin Diehl
a804b23b7a
bugfixing
2014-07-24 22:02:10 +00:00
Martin Diehl
d0ecc0943c
added addPK2 script to test
2014-07-24 21:42:13 +00:00
Martin Diehl
7954c9a4a3
more and improved tests for add...
2014-07-24 20:21:18 +00:00
Martin Diehl
38048a09f2
introduced use of choice for argparse where applicable
2014-07-24 18:47:09 +00:00
Martin Diehl
42032cbc25
started to restructure fitting to criterion
2014-07-22 21:59:58 +00:00
Martin Diehl
e5dc9e79cc
some more changes improving the post processing scripts
2014-07-22 14:21:49 +00:00
Martin Diehl
e8d2e787bc
updated first 9 post processing scripts to latest ASCII table handling style
2014-07-21 19:55:05 +00:00
Martin Diehl
c8cd775747
added spectral solver grid location and index function to util library
2014-07-21 17:49:45 +00:00
Martin Diehl
2f0ecdf7e8
improved file handling etc. to follow newest style
2014-07-16 16:41:04 +00:00
Martin Diehl
e7c282a02d
some further improvements on ASCII table handling
2014-07-10 09:27:51 +00:00
Martin Diehl
f72a87f94b
polished scripts (option parser, numpy)
2014-07-09 10:07:24 +00:00
Martin Diehl
fd2164b391
von Mises fitting seems to work, still needs polishing (adding options etc)
2014-07-09 09:31:26 +00:00
Martin Diehl
5f638a059a
corrected string substitution
2014-07-09 07:17:58 +00:00
Martin Diehl
fdb4f2ffea
now the program flow is working
2014-07-08 16:09:02 +00:00
Philip Eisenlohr
826f3d4dc7
added possibility to rotate primitives.
...
better help text.
2014-07-07 17:32:37 +00:00
Martin Diehl
7a478d646a
added call to DAMASK spectral
2014-07-07 14:17:44 +00:00
Martin Diehl
a48b4cfc95
improved dummy yield surface generator
2014-07-04 13:40:15 +00:00
Martin Diehl
a68fe7c77b
first draft of a script to compute yield surfaces with the spectral solver
2014-07-02 10:42:51 +00:00
Martin Diehl
1ff38b98af
fixed error in file handling
2014-06-18 09:00:57 +00:00
Martin Diehl
51b92f3ef9
simplified option parsing (so far, only for addCalculation and addMises)
2014-06-17 07:10:10 +00:00
Luv Sharma
596ee18da9
improved the regex for header reading
2014-06-08 14:43:32 +00:00
Philip Eisenlohr
31aded8311
no scaling of the output by size (seeds files are within 0..1)
...
plus some polishing here and there
2014-06-08 12:48:32 +00:00
Philip Eisenlohr
b0ab048d7b
now aware of "origin" keyword in seeds-file
2014-06-07 18:15:08 +00:00
Philip Eisenlohr
e3c4e0ecfc
added option to override bounding box calculation from data with own geometry.
2014-06-07 18:14:30 +00:00
Philip Eisenlohr
72e9c512bd
polishing of variable names, comments, and some of the programming structure.
2014-06-07 18:13:29 +00:00
Philip Eisenlohr
2f249773c9
fixed missing Python module
2014-06-06 15:11:15 +00:00
Philip Eisenlohr
32b315487c
removed debug printing
2014-06-06 14:46:41 +00:00
Philip Eisenlohr
59e8cd1d7e
new script: Add data in column(s) of second ASCIItable selected from row that is given by the value in a mapping column
2014-06-06 14:35:37 +00:00
Philip Eisenlohr
63c1a0a212
updated to croaking, scriptID, IO-piping.
2014-06-06 09:43:28 +00:00
Pratheek Shanthraj
522efaac92
added immutable option
2014-06-05 17:18:52 +00:00
Philip Eisenlohr
9834c8466c
scripts to scale, shift, and rotate scalar, vector, or tensor quantities of ASCIItables (in-place!)
2014-05-27 08:08:10 +00:00
Philip Eisenlohr
3ec323e564
Create seed file by taking microstructure indices from given ASCIItable column.
2014-05-26 14:57:39 +00:00
Philip Eisenlohr
f81c6f6890
changed ASCIItable reading from _asArray (deprecated) to _readArray.
...
observe physical box size.
added compatibility to VTK > version 5.
2014-05-26 14:35:25 +00:00
Philip Eisenlohr
65f1f55a87
added option to pre-rotate orientation (change lab frame)
2014-05-26 14:31:42 +00:00
Philip Eisenlohr
51e7f9eed9
added --reverse option. corrected help hint regarding sorting order
2014-05-23 14:05:58 +00:00
Philip Eisenlohr
06715dc99f
added "no data check" and updated script backbone to be consistent with other scripts (croak).
2014-05-19 13:43:26 +00:00
Martin Diehl
89c896678b
added printing of cli arguments to seeds_fromRandom, fixed regression in compile_CoreModule and DAMASK_spectral_doxygen
2014-05-15 09:58:31 +00:00
Philip Eisenlohr
8a80f5ec7a
fixed typo that prevented selection of "Moore" neighborhood.
...
made "boundary" and "biplane" synonyms.
adopted more modern treatment of geom-files.
introduced scale for voxel size (independent of physical size and resolution given in geom-file).
2014-05-14 15:26:06 +00:00
Philip Eisenlohr
8b9ed55928
small "beautification"
2014-05-13 15:03:55 +00:00
Philip Eisenlohr
13f1607e15
changed default behavior to (system-provided) random seed instead of fixed "0"
2014-05-03 02:36:23 +00:00
Tias Maiti
0885ea8023
changed variable interpolation to be useable in connection with dictionary definitions for formulas. Slightly less efficient but now much more powerful...
2014-05-02 19:56:56 +00:00
Philip Eisenlohr
a8a9c8eef5
added possibility to not sort (--sort none) output by its --separation such that the output can be used in conjunction with the VTK files produced by DAMASK.
2014-04-14 21:45:24 +00:00
Philip Eisenlohr
a85ea307f1
changed (with backward compatibility) option "origin" to more suitable name of "center" since it specifies the position of the primitive's center, while "origin" could be mistaken for the lower left corner or such...
2014-04-09 14:22:27 +00:00
Philip Eisenlohr
babde13c6a
capture missing --vtk option
2014-04-03 01:00:00 +00:00
Martin Diehl
33af5af8cb
some small changes on the header/shebang
2014-04-01 19:29:14 +00:00
Martin Diehl
342ca0be47
tested new scripts to update shebang, all files got same shebang (and for python files encoding)
2014-04-01 18:41:14 +00:00
Martin Diehl
782b54a430
more LF, Id, and executable status changes
2014-04-01 17:52:31 +00:00
Claudio Zambaldi
559f14ca35
prepended *draw_manual for faster processing in "new" Mentat, thx Christoph
2014-04-01 17:06:10 +00:00
Martin Diehl
188002f16e
more LF, Id, and executable status changes
2014-04-01 16:58:54 +00:00
Martin Diehl
c254f87814
now assuming periodic microstructures (was not fully correct before, assuming non-periodicity)
2014-04-01 16:43:39 +00:00
Philip Eisenlohr
16743f8631
explicitly state unbuffered ASCIIoutput
2014-03-28 18:15:37 +00:00
Christoph Kords
f19955c84a
added options to specify the columns for the grain IDs and segments
...
improved error handling
2014-03-12 14:26:44 +00:00
Martin Diehl
0363b1fb04
updated reporting (according to addCauchy)
2014-03-10 14:01:39 +00:00
Christoph Kords
e10f8f1b5e
corrected typo
2014-03-04 16:43:22 +00:00
Philip Eisenlohr
943349fdbb
bunch of new scripts:
...
gwyddion_filter tries to smoothen out Gwyddion data sets.
vtk_fromGwyddion produces vtk mesh from Gwyddion data set.
geom_addPrimitive allows to add box, cylinder, or ellipsoidal blobs to geom file.
2014-03-04 03:34:34 +00:00
Philip Eisenlohr
6fd8407d6e
moved "predefined" to colormap init
...
cleaned interpolate to not change color model
fixed color range cropping issue
2014-02-28 16:09:01 +00:00
Philip Eisenlohr
63569b19b6
added use of "defaultdict" from collections
2014-02-28 15:56:28 +00:00
Philip Eisenlohr
fdbde250dc
deleted obsolete table.data_rewind to be pipe-safe
2014-02-28 15:55:48 +00:00
Martin Diehl
27c83f60a6
fixed typo
2014-02-26 15:05:34 +00:00
Philip Eisenlohr
7f08c976c3
skip file if mandatory column not found in ASCIItable
2014-02-26 14:56:06 +00:00
Philip Eisenlohr
98a8b47a09
can now read legacy VTK files with unstructured grid data
2014-02-24 19:23:08 +00:00
Martin Diehl
9d402022aa
fixed small bug when using renumber option
2014-02-15 10:37:50 +00:00
Martin Diehl
371a027de9
added option '--renumber' to geom_rescale and geom_grainGrowth to renumber microstructures from 1 to N (without gaps), off by default.
...
added metavar information to some scripts
2014-02-14 13:17:29 +00:00