6046a7ae3d
there is no scipy.linalg (at least on my system)
...
numpy.linalg is automatically imported together with numpy
2018-02-26 20:22:57 +01:00
b078234644
added scipy and scipy.linalg as known modules for calculations
2018-02-25 14:19:22 -05:00
f5177b6d2d
[skip ci] added option for non-periodic geometries
2018-02-20 10:20:35 -05:00
2254746177
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-02-12 11:23:05 +01:00
9249e7db2b
Merge branch 'development' into HMS
2018-02-07 11:44:17 +01:00
ba3a4e1254
indicating vectors with 1_, ..., n_ is standard now, "euler" also (more or less)
2018-02-05 17:34:08 +01:00
e304ce35da
forgot to rename function call to read "coordGridAndSize"
2018-01-30 12:58:43 -05:00
355d576b4d
shortened code with utility function coordGridAndSize
2018-01-30 09:20:47 -05:00
710970d728
updated option --label for addCurl/Div/Grad
2018-01-29 21:27:05 -05:00
1d71a52133
further simplifcation of scripts
2018-01-29 15:10:41 -05:00
b45b43c5ac
bug fix in addCurl, simplified scripts
2018-01-29 14:12:19 -05:00
622d038932
einsum now compatible with numpy 1.14
2018-01-29 09:18:05 -05:00
30272fc355
generalized addCurl with --data instead of --tensor and --vector
2018-01-28 18:25:50 -05:00
8fb127f31c
better description of activity
2018-01-28 18:08:02 -05:00
761670f218
generalized addGradient with --data instead of --scalar and --vector
2018-01-28 18:02:35 -05:00
532d669d33
switched to more robust line based output
2018-01-27 17:45:53 -05:00
ceb0ff09e6
Subdivide vertex data with geometry when converting Marc input to VTK
2018-01-15 17:20:24 -05:00
a03bb1ec3e
Add MSC.Marc to VTK conversion support
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marc_to_vtk.py takes Marc input file, subdivides it and creates a
vtkUnstructuredGrid .vtu file with the resulting geometry. Currently
supports hexahedron elements.
vtk_addGridData.py adds nodal/cell data to some VTK grid. It is
essentially vtk_addRectilinearGridData with support for unstructured
grid (.vtu) format, which is marc_to_vtk.py's output.
2017-12-11 12:32:38 -05:00
c33655b479
fixed pyflakes issues
2017-11-28 11:14:22 -05:00
0c8c4b54aa
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-11-28 11:12:05 -05:00
3b96fac8bd
added script to calculate numerical derivative of ASCIItable data
2017-11-28 10:59:53 -05:00
4dfb52c792
unfinished HDF5 should not be part of the next release
2017-11-21 10:23:50 +01:00
b4f4527ad1
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-11-05 08:31:59 +01:00
2b69cb8ea9
removed unnecessary liens
2017-10-24 13:23:44 +02:00
d77789b89f
minor change
2017-10-24 12:01:10 +02:00
d599aec37f
Merge branch 'development' into HMS
2017-10-24 11:24:54 +02:00
82758bd90f
added yield criterion of facet potential
2017-10-24 11:15:34 +02:00
eddc2a6acf
numpy actually not needed
2017-10-20 10:17:08 +02:00
0c24f113c1
split overlong line
2017-10-20 10:14:15 +02:00
26b8788c06
script to colocate 2D ang files into one §D file and optionally creat geometry and Paraview files
2017-10-20 09:36:57 +02:00
eda8c24b7d
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-10-07 17:24:59 +02:00
14c1291046
added "--quiet" option to suppress online messaging
2017-10-03 14:03:50 -04:00
f46d721750
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-09-03 17:42:02 -07:00
64259d9239
bug fixed in whitelist sorting, more robust against numpy parsing errors
2017-08-28 19:38:14 -04:00
5b8bc65d37
exchanged string 'n/a' for 'nan' to allow smooth parsing as float value
2017-08-28 19:32:59 -04:00
9e5896a6c5
large speedup (10x) for unconditional filtering by using read/writeArray
2017-08-23 20:54:02 -04:00
fc4fb43d48
aborting when NO data columns found
2017-08-23 17:53:30 -04:00
ff072ae3c4
fixed bug (lost orgin info)
2017-08-23 15:14:22 -04:00
e82df723d1
added Rodrigues vector as possible input format
2017-08-23 14:10:56 -04:00
b3ac200c17
report linking column in screen output
2017-08-23 14:10:22 -04:00
9b6e092b5c
changed location where script appends itself to info trail
...
used to be sometimes at top, sometimes at bottom; now always after predecessor and above standard geom header
2017-08-23 14:09:33 -04:00
f825e91bf1
script to straighten numbering in geom
2017-08-23 14:08:11 -04:00
12fed7a38f
added option to use seed coordinates that are not normalized to a unit cube
2017-08-16 16:24:45 -04:00
255a465e8b
sharpened error detection and reporting
2017-08-16 15:18:29 -04:00
e18c2fd74c
slight layout tweak
2017-08-16 12:52:46 -04:00
91c70fc823
sharpened error detection and reporting
2017-08-16 12:51:32 -04:00
a2947789b5
clarified help and reporting
2017-08-15 16:12:06 -04:00
4eff7cfdd8
fixed wrong name for "pos" options destination
2017-08-15 16:11:21 -04:00
95c0179945
labeling vectors and values independenty in addSpectralDecomposition
2017-08-13 02:14:34 +02:00
e6cc948ddf
added vector-valued conditions and cleaned obsolete code
2017-08-11 15:19:47 -04:00
b7d4b3d190
simplified internal handling of conditions and added vector capability to it
2017-08-11 11:56:27 -04:00
3860eecb7c
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-08-10 11:09:37 -04:00
9bbc0d4803
implemented fast yield surface fitting with yield stop criteria
2017-08-08 17:29:14 +02:00
36c370e668
implemented fast yield surface fitting with yield stop criteria
2017-08-08 17:25:38 +02:00
1a423617c2
combined assignement of curvature exponent to deal with negative dimensions
2017-08-03 12:12:47 -04:00
84a3885af8
negated option from "voxelspace" to "realspace".
...
introduced logarithmic sense of curvature exponents, additional polishing
2017-08-03 12:08:51 -04:00
cb62066667
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-07-31 23:00:24 +02:00
68493a00f5
fixed PEP line continuation warning
2017-07-31 10:04:04 -04:00
c8222d6f82
Merge remote-tracking branch 'origin/development' into development
2017-07-31 09:51:10 -04:00
837b14592a
addLinked can now link between vector-valued columns
2017-07-31 09:34:30 -04:00
269eacb11d
added flag for skipping right-handedness check of eigenvector basis
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separate names for min,mid,max eigvals and vecs
2017-07-28 13:44:17 -04:00
6547ab8c69
not needed, ASCII table ensures shape (Npoints,Nvalues)
2017-07-05 04:43:20 +02:00
f085f61c4d
testing hook that checks for executable bit
2017-06-02 09:25:58 +02:00
6599f7299d
correct description
2017-06-01 10:00:29 +02:00
e5af0630fe
gaussian filter (wrapper no ndimage)
2017-05-29 10:33:05 +02:00
691f338f5d
executable bit got lost
2017-05-19 09:33:58 +02:00
ed85ce5bdb
changed argument handling in line with other scripts
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now also works with stdin/out
2017-04-28 12:36:10 +02:00
d35df1df49
Operate on MFD file to apply servo links, not client-server communication
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Speed up by many orders of magnitude... 64 x 64 x 64 mesh less than a minute! Thanks Brendan!
2017-04-26 17:32:01 -04:00
c34716a0da
modern form of croaking, added '*draw_automatic' as final output
2017-04-14 15:07:43 -04:00
d1c2e2114d
switch auto drawing back on at end of pipeline
2017-04-13 19:00:19 -04:00
95a982e002
default type for muliple arguments (not extend) is tuple, not list
2017-04-13 12:54:26 +02:00
88809863ba
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-03-20 15:14:15 -04:00
66b4e24ab7
solver.Marc.version has no argument anymore
2017-03-20 15:13:54 -04:00
0d648b8de0
Change script to use resolution-independent coords
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- Use the --voxelspace flag to get the old behavior
2017-03-07 20:37:30 -05:00
de57d9514e
removed code doubling and unused variables
2017-03-05 17:50:17 +01:00
f010aa97d9
Fix non-cube geometry structure, reduce memory
2017-02-24 22:30:04 -05:00
e5e6bed5de
Improve performance and generalize primitive shape
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- Behavior is mostly unchanged, but the primitive may be shifted by a voxel when compared to the previous version, which had rounding issues near the edge of the primitive.
- exponent flag specifies the exponents that satisfy the equation x^e1 + y^e2 + z^e3 < 1. (1,1,1) gives an octahedron, (2,2,2) a sphere, and large values (1e10, 1e10, 1e10) gives a hexahedral box for any reasonable resolution. Mixing the two can produce a cylinder, (1e10, 2, 2) gives one with rotational symmetry about the x-axis.
2017-02-24 00:42:28 -05:00
a9d72c54b6
was not python3 conforming
2017-02-04 01:07:24 +01:00
746cb9c306
nicer code layout
2017-01-19 15:10:38 +01:00
c80b02dd72
avoid reporting "none" as STDIN filename
2017-01-19 15:10:17 +01:00
49eb7aa1be
fixed nasty ABS that caused wrong packing for 1,2,1,1,1,... and the like
2016-12-25 12:39:49 -05:00
3628deb30e
changed option name from "no-config" to more common "without-config"
2016-12-23 17:46:16 -05:00
d67be0e3f3
reduced memory footprint (substantially) by switching to 32bit precision
2016-12-08 23:36:19 -05:00
c8f321356d
prefill immutable indices with closest mutable one
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Retain only orginially immutable locations, not those where immutability bled into.
Changed threshold for change from 0.5 to 0.95 of max diffusedEnergy.
2016-12-08 09:47:20 -05:00
9bb4f89e78
removed leftover debug output
2016-12-06 21:36:45 -05:00
a2db7e9ba1
added option to suppress writing of material.config part in header
2016-12-06 21:36:25 -05:00
cb95f3b244
fixed systematic drift of grain structure along -[1,1,1]
...
correction of periodic Gauss kernel extension, inclusion of ndimage.gaussian_filter alternative (same runtime as FFT), proper output handling of grids <3D
2016-11-30 09:39:13 -05:00
40de6910b8
added --float option to translate real-valued grid data
2016-11-29 23:59:42 -05:00
814b05e2f6
renamed to hopefully clearer express functionality
2016-11-29 16:30:24 -05:00
0f04ddd88e
polishing of whitespace, usage help, etc.
2016-11-29 14:44:34 -05:00
43c1880195
fixed periodic averaging to work with multi-dimensional data
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option --periodic now takes list of labels that undergo periodoc domain averaging, i.e. incompatible to former API!
2016-11-29 14:44:06 -05:00
231f05e142
corrected bug that added index column values as first output
2016-11-29 11:16:50 -05:00
c9ec2e0f46
New table mapping based on shared column values
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renamed old addMapped to addRowMapped to better reflect true functionality.
2016-11-29 09:33:35 -05:00
873c52cceb
using 3 way merge to have syntax as similar as possible
2016-11-07 19:51:12 +01:00
6d91ce866e
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2016-11-07 09:10:39 +01:00
551b4369a1
improved readability
2016-11-07 09:06:35 +01:00
8179a703fb
now more flexible, works for synthetic data and user selected data
2016-11-06 23:07:12 +01:00
d35c9dd431
using Einstein sum to replace 'for loop'
2016-11-04 18:50:39 +01:00
a04968d43f
Merge branch 'development' into negativeRange
2016-11-01 17:20:56 +01:00
9e76b51014
fixing global variables handling (need to be defined before being used)
2016-10-31 22:53:14 +01:00
Martin Diehl