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DAMASK_EICMD
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changed location where script appends itself to info trail 

used to be sometimes at top, sometimes at bottom; now always after predecessor and above standard geom header
This commit is contained in:
Philip Eisenlohr 2017-08-23 14:09:33 -04:00
parent f825e91bf1
commit 9b6e092b5c
7 changed files with 27 additions and 31 deletions
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3
processing/pre/geom_addPrimitive.py
View File

@ -206,14 +206,13 @@ for name in filenames:
#--- write header ---------------------------------------------------------------------------------
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {}\tb {}\tc {}".format(*info['grid']),
"size\tx {}\ty {}\tz {}".format(*info['size']),
"origin\tx {}\ty {}\tz {}".format(*info['origin']),
"homogenization\t{}".format(info['homogenization']),
"microstructures\t{}".format(newInfo['microstructures']),
extra_header
])
table.labels_clear()
table.head_write()

3
processing/pre/geom_canvas.py
View File

@ -143,14 +143,13 @@ for name in filenames:
# --- write header ---------------------------------------------------------------------------------
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {}\tb {}\tc {}".format(*newInfo['grid']),
"size\tx {}\ty {}\tz {}".format(*newInfo['size']),
"origin\tx {}\ty {}\tz {}".format(*newInfo['origin']),
"homogenization\t{}".format(info['homogenization']),
"microstructures\t{}".format(newInfo['microstructures']),
extra_header
])
table.labels_clear()
table.head_write()

3
processing/pre/geom_mirror.py
View File

@ -95,14 +95,13 @@ for name in filenames:
table.labels_clear()
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=newInfo['grid']),
"size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=newInfo['size']),
"origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']),
"homogenization\t{homog}".format(homog=info['homogenization']),
"microstructures\t{microstructures}".format(microstructures=info['microstructures']),
extra_header
])
table.head_write()

3
processing/pre/geom_rescale.py
View File

@ -139,14 +139,13 @@ for name in filenames:
# --- write header ---------------------------------------------------------------------------------
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=newInfo['grid']),
"size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=newInfo['size']),
"origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']),
"homogenization\t{homog}".format(homog=info['homogenization']),
"microstructures\t{microstructures}".format(microstructures=newInfo['microstructures']),
extra_header
])
table.labels_clear()
table.head_write()

40
processing/pre/geom_rotate.py
View File

@ -49,16 +49,18 @@ parser.set_defaults(degrees = False,
(options, filenames) = parser.parse_args()
if sum(x is not None for x in [options.rotation,options.eulers,options.matrix,options.quaternion]) !=1:
if sum(x is not None for x in [options.rotation,options.eulers,options.matrix,options.quaternion]) != 1:
parser.error('not exactly one rotation specified...')
toRadian = math.pi/180. if options.degrees else 1.0
eulers = np.array(damask.orientation.Orientation(
quaternion=np.array(options.quaternion) if options.quaternion else None,
angleAxis =np.array(options.rotation) if options.rotation else None,
matrix =np.array(options.matrix) if options.matrix else None,
Eulers =np.array(options.eulers)*toRadian if options.eulers else None
).asEulers()) *180./math.pi
quaternion = np.array(options.quaternion) if options.quaternion else None,
angleAxis = np.array(options.rotation) if options.rotation else None,
matrix = np.array(options.matrix) if options.matrix else None,
Eulers = np.array(options.eulers) if options.eulers else None,
degrees = options.degrees,
).asEulers(degrees=True))
damask.util.croak('{} {} {}'.format(*eulers))
# --- loop over input files -------------------------------------------------------------------------
@ -67,7 +69,8 @@ if filenames == []: filenames = [None]
for name in filenames:
try:
table = damask.ASCIItable(name = name,
buffered = False, labeled = False)
buffered = False,
labeled = False)
except: continue
damask.util.report(scriptName,name)
@ -76,11 +79,11 @@ for name in filenames:
table.head_read()
info,extra_header = table.head_getGeom()
damask.util.croak(['grid a b c: %s'%(' x '.join(map(str,info['grid']))),
'size x y z: %s'%(' x '.join(map(str,info['size']))),
'origin x y z: %s'%(' : '.join(map(str,info['origin']))),
'homogenization: %i'%info['homogenization'],
'microstructures: %i'%info['microstructures'],
damask.util.croak(['grid a b c: {}'.format(' x '.join(map(str,info['grid']))),
'size x y z: {}'.format(' x '.join(map(str,info['size']))),
'origin x y z: {}'.format(' : '.join(map(str,info['origin']))),
'homogenization: {}'.format(info['homogenization']),
'microstructures: {}'.format(info['microstructures']),
])
errors = []
@ -95,10 +98,10 @@ for name in filenames:
microstructure = table.microstructure_read(info['grid']).reshape(info['grid'],order='F') # read microstructure
newGrainID = options.fill if options.fill > 0 else microstructure.max()+1
microstructure = ndimage.rotate(microstructure,eulers[2],(0,1),order=0,output=int,cval=newGrainID) # rotation around Z
microstructure = ndimage.rotate(microstructure,eulers[1],(1,2),order=0,output=int,cval=newGrainID) # rotation around X
microstructure = ndimage.rotate(microstructure,eulers[0],(0,1),order=0,output=int,cval=newGrainID) # rotation around Z
newGrainID = options.fill if options.fill != 0 else microstructure.max()+1
microstructure = ndimage.rotate(microstructure,eulers[2],(0,1),order=0,prefilter=False,output=int,cval=newGrainID) # rotation around Z
microstructure = ndimage.rotate(microstructure,eulers[1],(1,2),order=0,prefilter=False,output=int,cval=newGrainID) # rotation around X
microstructure = ndimage.rotate(microstructure,eulers[0],(0,1),order=0,prefilter=False,output=int,cval=newGrainID) # rotation around Z
# --- do work ------------------------------------------------------------------------------------
@ -124,14 +127,13 @@ for name in filenames:
table.labels_clear()
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=newInfo['grid']),
"size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=newInfo['size']),
"origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']),
"homogenization\t{homog}".format(homog=info['homogenization']),
"microstructures\t{microstructures}".format(microstructures=newInfo['microstructures']),
extra_header
])
table.head_write()

3
processing/pre/geom_translate.py
View File

@ -112,14 +112,13 @@ for name in filenames:
table.labels_clear()
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=info['grid']),
"size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=info['size']),
"origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=newInfo['origin']),
"homogenization\t{homog}".format(homog=info['homogenization']),
"microstructures\t{microstructures}".format(microstructures=newInfo['microstructures']),
extra_header
])
table.head_write()

3
processing/pre/geom_vicinityOffset.py
View File

@ -94,14 +94,13 @@ for name in filenames:
table.labels_clear()
table.info_clear()
table.info_append([
table.info_append(extra_header+[
scriptID + ' ' + ' '.join(sys.argv[1:]),
"grid\ta {grid[0]}\tb {grid[1]}\tc {grid[2]}".format(grid=info['grid']),
"size\tx {size[0]}\ty {size[1]}\tz {size[2]}".format(size=info['size']),
"origin\tx {origin[0]}\ty {origin[1]}\tz {origin[2]}".format(origin=info['origin']),
"homogenization\t{homog}".format(homog=info['homogenization']),
"microstructures\t{microstructures}".format(microstructures=newInfo['microstructures']),
extra_header
])
table.head_write()