Commit Graph

158 Commits

Author SHA1 Message Date
Pratheek Shanthraj 4537720895 faster version for large number of grains. now performing diffusion on a small window around each grain where window around each grain is obtained cheaply 2013-06-27 16:57:14 +00:00
Philip Eisenlohr 034a6bc926 grid dimension can be changed by factor ("2x"), or left alone with number <= 0.
now understands packed geom structure.
2013-06-27 15:35:49 +00:00
Philip Eisenlohr 5f347648e1 now understands packed geom structure 2013-06-27 15:34:37 +00:00
Harsha Phukan 76171eec15 added possibility for factors---indicated by "x" at the end---and left-alone condition now comprises "0" as well as "negative numbers. understands packed structures, too. 2013-06-27 12:58:12 +00:00
Philip Eisenlohr 8b5ba9f8f0 now understands packed geom-files (much faster processing...) 2013-06-21 21:19:14 +00:00
Philip Eisenlohr 4cf2e75dc1 justification of numbers done with space instead of "0"s 2013-06-21 21:18:10 +00:00
Philip Eisenlohr e53c67f0e0 added black list for immutable microstructures.
now able to parse packed geom-files.
2013-06-21 21:17:03 +00:00
Philip Eisenlohr 3b4573301c removed now obsolete Moore neighborhood array 2013-06-21 19:10:10 +00:00
Philip Eisenlohr 5d15f68914 added help description.
fixed bug for grain index (+1).
renamed some variables and added a few comments.
2013-06-21 19:08:20 +00:00
Pratheek Shanthraj 2e8756b724 faster version of smoother using the scipy gaussian filter to get the diffused microstructure and vectorized sharpening of the diffused microstructure 2013-06-21 16:59:49 +00:00
Philip Eisenlohr 45951e27c5 script to smooth out interface roughness in a (polycrystal) geom 2013-06-20 19:45:25 +00:00
Ding Wang 920195809c fixed bug in auto determination of size and grid 2013-06-11 10:11:14 +00:00
Martin Diehl e635b06270 last polishing on preprocessing scripts, documentation and scripts are all up to date.
added addSchmidfactors to post processing scripts
2013-06-04 12:56:57 +00:00
Martin Diehl a21dd816c7 init reporting of constitutive_*.f90 had less/to much spaces, renamed label to LABEL because it is a parameter.
removed debug output of geom_fromEuclideanDistance.py
2013-05-28 17:31:55 +00:00
Martin Diehl b3a90a8a3b last changes on preprocessing tools, only documentation needs to be done 2013-05-17 16:44:03 +00:00
Martin Diehl 17b81fda7c still improving preprocessing scripts 2013-05-15 17:23:21 +00:00
Martin Diehl 53348db000 tested the modified scripts, all scripts generating geometry now named geom_from... 2013-05-15 16:02:38 +00:00
Martin Diehl 0b4a5cfa9b geom_check is now using vtk class, other scripts stop execution in case of invalid grid or size 2013-05-14 21:09:37 +00:00
Martin Diehl 9093cf2072 polishing, unifying,simplifying 2013-05-14 17:51:53 +00:00
Martin Diehl 2acd737859 polishing, unifying,simplifying 2013-05-14 17:19:36 +00:00
Martin Diehl 563e74c832 now also using numpy 2013-05-14 17:00:41 +00:00
Martin Diehl b2c50124b5 more improvements on structure, comments and header generation of pre processing tools 2013-05-13 13:10:31 +00:00
Martin Diehl 52af9aaabf made spectral preprocessing more verbose (now reporting changes on header) and aware of new keywords, added coding information below shebang 2013-05-13 11:27:59 +00:00
Martin Diehl a003d14824 grid and size for vicinityOffset, small changes for other scripts 2013-04-25 16:51:32 +00:00
Martin Diehl 5d8664e230 updated to new keywords + more verbosity 2013-04-25 15:53:41 +00:00
Martin Diehl 7cbf107751 removed misplaced new line statement 2013-04-24 11:07:05 +00:00
Pratheek Shanthraj aa07656a90 exchanged final two occurrences of "grains" to "microstructures" 2013-04-18 13:53:13 +00:00
Martin Diehl d971a32516 changed keywords, now also printing out altered size/grid/microstructures information 2013-04-16 18:00:14 +00:00
Martin Diehl 2ff0f1b93e keywords update from resolution/dimension to grid/size 2013-04-12 14:13:32 +00:00
Martin Diehl b4f67248a5 deleted two simple scripts used for debugging but with almost no use any more 2013-04-12 13:22:15 +00:00
Martin Diehl 7bcf1d6072 added ID information of creator script to header, changed keywords (resolution->grid, dimension->size) 2013-04-12 12:48:39 +00:00
Martin Diehl 4314ab236e added ID information of creator script to header 2013-04-12 11:15:17 +00:00
Martin Diehl 6f0308844f geom packing/unpacking won't throw away unknown header information any more (might contain comments) 2013-04-12 10:47:44 +00:00
Martin Diehl 0b1033d63a switched to new keywords "grid" and "size", still reads the old "resolution" and "dimension" but writes the new ones 2013-04-12 10:27:05 +00:00
Martin Diehl 010d4c6e26 added script to make 27 periodic copies (3 in each dimension) 2013-03-11 13:40:30 +00:00
Martin Diehl 8a66693001 added script to convert data used by R.A. Lebensohn to spectral solver (geom, material.config) format 2013-03-05 16:31:17 +00:00
Philip Eisenlohr 0d7f1e8623 killed "margin" option, now same as all others: resolution and dimension in x and y.
can be non-square grid.
2013-02-27 18:43:53 +00:00
Philip Eisenlohr 565c532546 fixed bugs (grain index start, alpha orientation for elliptic osteons).
added option to rotate osteon relative to periodic box.
2013-02-27 10:56:30 +00:00
Pratheek Shanthraj 1cc990c7ac osteon geom and config generator 2013-02-25 17:12:13 +00:00
Martin Diehl 831ad6d9c8 added leading zeros to names of microstructures and phases, spaces caused problems during initialization 2013-02-20 14:50:01 +00:00
Christoph Kords a90f15a3d3 corrected usage of "append" (which does not copy list items but only creates references) 2013-02-13 16:00:02 +00:00
Martin Diehl e74b5da19a changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
Philip Eisenlohr c8aaf8f6d4 added $id flags and specified line ending types when missing.
setup script missed ".py" extension for geom_euclideanDistance.
2013-01-18 12:59:26 +00:00
Pratheek Shanthraj 0e93d51fed adopted same algorithm as in addEuclideanDistance 2013-01-18 11:42:27 +00:00
Pratheek Shanthraj 096204cd79 corrected missing file renaming of output 2013-01-18 11:39:53 +00:00
Pratheek Shanthraj f63bb747c1 script to calculate the euclidean distance map (shortest distance to a grain boundary) of a given geom description using fast marching method (O(N logN) ops). grain boundary extracted using FD stencil. 2012-11-29 21:53:57 +00:00
Philip Eisenlohr 05507a6240 removed opening of unused _tmp file 2012-11-27 17:59:56 +00:00
Martin Diehl b5945ced5e changed counting of rows from pythonic (starting at 0) to human way (starting at 1) 2012-11-20 10:27:09 +00:00
Philip Eisenlohr 1df9be233d changed default threshold to 0.0 2012-11-08 17:08:41 +00:00
Philip Eisenlohr 025d6c9048 renamed script to new convention
aligned output behavior to that of fromVoronoiTessellation, i.e., standard output is geom, --config gives associated material.config stud
2012-11-08 15:44:51 +00:00