Martin Diehl
ba5b623f14
Merge branch 'development' into improved-HDF5
2018-11-18 19:44:36 +01:00
Martin Diehl
fcb14f6099
was never used
2018-11-18 12:04:08 +01:00
Martin Diehl
8ee2de61ea
map returns no list any more
2018-11-17 12:12:20 +01:00
Martin Diehl
257d9d5350
needs to be list
2018-11-17 12:12:20 +01:00
Martin Diehl
44bd85a041
not working for python3, trying
2018-11-17 12:12:20 +01:00
Martin Diehl
e1a730e96b
python3 compatible integer division and argument sequence in agreement with documentation
2018-11-17 09:58:54 +01:00
Martin Diehl
558745b548
explicitly require python3
...
on older systems, python3 tpyically exists but python2 is the defaul
2018-11-17 08:12:12 +01:00
Martin Diehl
4ffb4a4321
fixed several typos
2018-11-16 19:28:24 +01:00
Martin Diehl
26811b74d6
known to work with python3
2018-11-16 09:18:29 +01:00
Martin Diehl
a3647cc587
more files with confirmed python3 compatibility
2018-11-16 09:03:12 +01:00
Martin Diehl
f47891e292
booleans not allowed as indeces any more
2018-11-16 09:03:12 +01:00
Martin Diehl
fe2c7efa27
seem to work
2018-11-15 13:56:48 +01:00
Martin Diehl
8f80152a03
use floor division of integers
...
1/2 = 0.5 in python3 (would be 0 in python2)
2018-11-15 12:28:36 +01:00
Martin Diehl
efd29e62f7
verbose should be optional
...
- causes problems on many systems (screwed up output)
- does not work with python 3 since threading class has changed
2018-11-15 12:16:55 +01:00
Philip Eisenlohr
0cbcb028aa
fixed problem with "ValueError: Mixing iteration and read methods would lose data" for string-containing tables
2018-10-21 15:39:30 -04:00
Martin Diehl
7480d1a842
fixes for Python3
2018-10-19 07:35:59 +02:00
Martin Diehl
2632be2a76
polishing
2018-07-20 03:09:53 +02:00
Martin Diehl
1f637a0c49
python3 compatible map requires conversion to list
2018-07-19 18:01:38 +02:00
Martin Diehl
0438b7113a
using util function where possible, ensuring python3 compatibility
2018-07-19 16:38:25 +02:00
Martin Diehl
f928bd5e5b
more python 3 compatibility
2018-07-19 16:26:30 +02:00
Martin Diehl
35e470ff4d
needed for python3
2018-07-19 16:19:05 +02:00
Martin Diehl
9821654aae
iteritems does not exist in python3 anymore
...
items also works for python2 (might be slower though)
2018-07-19 16:16:10 +02:00
Martin Diehl
d138993c1d
using util functionality to be compatible with python3
2018-07-19 16:12:36 +02:00
Martin Diehl
aadcd61824
polishing
2018-06-18 00:05:55 +02:00
Martin Diehl
1bbaa7cefe
reverted last commit, scipy.linalg is different from numpy.linalg
2018-02-26 23:50:44 +01:00
Martin Diehl
6046a7ae3d
there is no scipy.linalg (at least on my system)
...
numpy.linalg is automatically imported together with numpy
2018-02-26 20:22:57 +01:00
Philip Eisenlohr
b078234644
added scipy and scipy.linalg as known modules for calculations
2018-02-25 14:19:22 -05:00
Philip Eisenlohr
e304ce35da
forgot to rename function call to read "coordGridAndSize"
2018-01-30 12:58:43 -05:00
Philip Eisenlohr
355d576b4d
shortened code with utility function coordGridAndSize
2018-01-30 09:20:47 -05:00
Philip Eisenlohr
710970d728
updated option --label for addCurl/Div/Grad
2018-01-29 21:27:05 -05:00
Philip Eisenlohr
1d71a52133
further simplifcation of scripts
2018-01-29 15:10:41 -05:00
Philip Eisenlohr
b45b43c5ac
bug fix in addCurl, simplified scripts
2018-01-29 14:12:19 -05:00
Philip Eisenlohr
622d038932
einsum now compatible with numpy 1.14
2018-01-29 09:18:05 -05:00
Philip Eisenlohr
30272fc355
generalized addCurl with --data instead of --tensor and --vector
2018-01-28 18:25:50 -05:00
Philip Eisenlohr
8fb127f31c
better description of activity
2018-01-28 18:08:02 -05:00
Philip Eisenlohr
761670f218
generalized addGradient with --data instead of --scalar and --vector
2018-01-28 18:02:35 -05:00
Philip Eisenlohr
532d669d33
switched to more robust line based output
2018-01-27 17:45:53 -05:00
Brendan Vande Kieft
ceb0ff09e6
Subdivide vertex data with geometry when converting Marc input to VTK
2018-01-15 17:20:24 -05:00
brendanvk
a03bb1ec3e
Add MSC.Marc to VTK conversion support
...
marc_to_vtk.py takes Marc input file, subdivides it and creates a
vtkUnstructuredGrid .vtu file with the resulting geometry. Currently
supports hexahedron elements.
vtk_addGridData.py adds nodal/cell data to some VTK grid. It is
essentially vtk_addRectilinearGridData with support for unstructured
grid (.vtu) format, which is marc_to_vtk.py's output.
2017-12-11 12:32:38 -05:00
Philip Eisenlohr
c33655b479
fixed pyflakes issues
2017-11-28 11:14:22 -05:00
Philip Eisenlohr
0c8c4b54aa
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-11-28 11:12:05 -05:00
Philip Eisenlohr
3b96fac8bd
added script to calculate numerical derivative of ASCIItable data
2017-11-28 10:59:53 -05:00
Martin Diehl
4dfb52c792
unfinished HDF5 should not be part of the next release
2017-11-21 10:23:50 +01:00
Martin Diehl
eda8c24b7d
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-10-07 17:24:59 +02:00
Philip Eisenlohr
14c1291046
added "--quiet" option to suppress online messaging
2017-10-03 14:03:50 -04:00
Tias Maiti
f46d721750
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-09-03 17:42:02 -07:00
Philip Eisenlohr
64259d9239
bug fixed in whitelist sorting, more robust against numpy parsing errors
2017-08-28 19:38:14 -04:00
Philip Eisenlohr
5b8bc65d37
exchanged string 'n/a' for 'nan' to allow smooth parsing as float value
2017-08-28 19:32:59 -04:00
Philip Eisenlohr
9e5896a6c5
large speedup (10x) for unconditional filtering by using read/writeArray
2017-08-23 20:54:02 -04:00
Philip Eisenlohr
fc4fb43d48
aborting when NO data columns found
2017-08-23 17:53:30 -04:00
Philip Eisenlohr
e82df723d1
added Rodrigues vector as possible input format
2017-08-23 14:10:56 -04:00
Philip Eisenlohr
b3ac200c17
report linking column in screen output
2017-08-23 14:10:22 -04:00
Philip Eisenlohr
255a465e8b
sharpened error detection and reporting
2017-08-16 15:18:29 -04:00
Philip Eisenlohr
e18c2fd74c
slight layout tweak
2017-08-16 12:52:46 -04:00
Philip Eisenlohr
91c70fc823
sharpened error detection and reporting
2017-08-16 12:51:32 -04:00
Philip Eisenlohr
a2947789b5
clarified help and reporting
2017-08-15 16:12:06 -04:00
Martin Diehl
95c0179945
labeling vectors and values independenty in addSpectralDecomposition
2017-08-13 02:14:34 +02:00
Philip Eisenlohr
e6cc948ddf
added vector-valued conditions and cleaned obsolete code
2017-08-11 15:19:47 -04:00
Zhuowen Zhao
b7d4b3d190
simplified internal handling of conditions and added vector capability to it
2017-08-11 11:56:27 -04:00
Tias Maiti
3860eecb7c
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-08-10 11:09:37 -04:00
Martin Diehl
cb62066667
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-07-31 23:00:24 +02:00
Philip Eisenlohr
68493a00f5
fixed PEP line continuation warning
2017-07-31 10:04:04 -04:00
Philip Eisenlohr
c8222d6f82
Merge remote-tracking branch 'origin/development' into development
2017-07-31 09:51:10 -04:00
Philip Eisenlohr
837b14592a
addLinked can now link between vector-valued columns
2017-07-31 09:34:30 -04:00
Unknown
269eacb11d
added flag for skipping right-handedness check of eigenvector basis
...
separate names for min,mid,max eigvals and vecs
2017-07-28 13:44:17 -04:00
Martin Diehl
6547ab8c69
not needed, ASCII table ensures shape (Npoints,Nvalues)
2017-07-05 04:43:20 +02:00
Martin Diehl
f085f61c4d
testing hook that checks for executable bit
2017-06-02 09:25:58 +02:00
Martin Diehl
6599f7299d
correct description
2017-06-01 10:00:29 +02:00
Martin Diehl
e5af0630fe
gaussian filter (wrapper no ndimage)
2017-05-29 10:33:05 +02:00
Philip Eisenlohr
66b4e24ab7
solver.Marc.version has no argument anymore
2017-03-20 15:13:54 -04:00
Philip Eisenlohr
746cb9c306
nicer code layout
2017-01-19 15:10:38 +01:00
Philip Eisenlohr
c80b02dd72
avoid reporting "none" as STDIN filename
2017-01-19 15:10:17 +01:00
Philip Eisenlohr
814b05e2f6
renamed to hopefully clearer express functionality
2016-11-29 16:30:24 -05:00
Philip Eisenlohr
0f04ddd88e
polishing of whitespace, usage help, etc.
2016-11-29 14:44:34 -05:00
Philip Eisenlohr
43c1880195
fixed periodic averaging to work with multi-dimensional data
...
option --periodic now takes list of labels that undergo periodoc domain averaging, i.e. incompatible to former API!
2016-11-29 14:44:06 -05:00
Philip Eisenlohr
231f05e142
corrected bug that added index column values as first output
2016-11-29 11:16:50 -05:00
Philip Eisenlohr
c9ec2e0f46
New table mapping based on shared column values
...
renamed old addMapped to addRowMapped to better reflect true functionality.
2016-11-29 09:33:35 -05:00
Martin Diehl
873c52cceb
using 3 way merge to have syntax as similar as possible
2016-11-07 19:51:12 +01:00
Chuanlai Liu
551b4369a1
improved readability
2016-11-07 09:06:35 +01:00
Chuanlai Liu
d35c9dd431
using Einstein sum to replace 'for loop'
2016-11-04 18:50:39 +01:00
Philip Eisenlohr
94fcc9ad24
fixed language and syntax
2016-10-31 10:40:58 -04:00
Martin Diehl
99dc75c2fd
proper capitalization
2016-10-25 21:53:32 +02:00
Martin Diehl
8a94f55a2e
python 3 compatibility
2016-10-25 06:44:12 +02:00
Martin Diehl
a84e7310f5
fixed prospector hints
2016-10-24 20:30:51 +02:00
chen
96349ebf53
add log to each dataset
2016-10-17 18:24:47 -04:00
chen
703ae3c6d6
add script for adding von Mises equivalent to HDF5 file
2016-10-17 17:29:44 -04:00
chen
4d849219f7
will come back for this later
2016-10-17 16:59:42 -04:00
chen
8e7f0c255b
fix some syntax error
2016-10-17 16:58:04 -04:00
chen
74b29881f3
strain tensor calculation script for HDF5
2016-10-17 16:24:11 -04:00
chen
1a2194f042
remove useless functions
2016-10-17 16:23:21 -04:00
chen
fb1e4f0c39
add IPF color tuple for HDF5 file
2016-10-17 12:24:29 -04:00
chen
b04c5801a5
syntax polish
2016-10-14 14:38:09 -04:00
chen
0a35761636
delete unused module
2016-10-14 14:33:22 -04:00
chen
dfb49c3138
as script for calc Cauchy stress in HDF5
...
no safe net in the script, following 'let-it-fail' design
2016-10-14 14:32:20 -04:00
chen
fd4b495de2
adding interface for addCalc with HDF5
2016-10-14 14:30:46 -04:00
chen
05a3b569fc
adding parallel version of addCalc for H5 table
2016-10-14 12:26:46 -04:00
chen
33de9cf2b9
script for adding data from HDF5 to vtk file
2016-10-14 12:06:59 -04:00
chen
1f01dce862
use 4 space indentation
2016-10-14 12:06:09 -04:00
chen
2f2490e784
remove unused import
2016-10-14 10:48:08 -04:00
chen
e5e2eef375
add script generate vtr file from HDF5
...
following "let-it-fail" design
2016-10-14 10:45:42 -04:00