Commit Graph

185 Commits

Author SHA1 Message Date
Christoph Kords ee2595c008 added method to use predefined colormaps 2013-05-28 13:50:36 +00:00
Christoph Kords 4fda285e08 added method to invert colormap 2013-05-28 12:18:25 +00:00
Christoph Kords d01a8bdf8c renamed methods "to" and "asModel" to more (?) meaningfull "convertTo" and "expressAs" 2013-05-28 11:47:15 +00:00
Christoph Kords 8421587724 added some space here and there for more readability 2013-05-28 11:39:26 +00:00
David Mercier 190a59b707 set Lib_VTK_IO-master.zip and related files back to initial version, new version is not working with MSC.Marc 2010 2013-05-15 16:43:18 +00:00
Martin Diehl b83b557af2 updated Lib_VTK_IO again. Contains small bug fix ans support for Base64 encoding 2013-05-10 12:57:00 +00:00
Martin Diehl cfac73043d some lines in crystallite.f90 exceeded limit of 132 characters
fixed bug in Lib_VTK_IO.f90 (informed author as well)
added zip file containing source of Lib_VTK_IO.f90
2013-05-08 17:48:00 +00:00
Martin Diehl 755e0e2440 vtk files are now correctly written to current working directory.
updated Lib_VTK_IO.f90
2013-05-08 16:10:21 +00:00
Martin Diehl 3f9d642d87 corrected error message when complaining about uncompiled core module 2013-04-29 16:30:08 +00:00
Martin Diehl 8da7544978 marc doesn't need error prone setup_code any more, moved Marc includes from code/include to lib/includeMarc
DAMASK_marcXXXX.f90 now is not a copy any more but contains one definition and an include statement

setup_code of spectral solver is now replaced by the standard 1) configure 2) make 3) make install
2013-04-22 14:41:33 +00:00
Martin Diehl d751283b4a updated fftw to 3.3.3 (from 3.3.2) 2013-04-16 16:38:54 +00:00
Martin Diehl ee22a2698b added library to write out vtk file from Fortran (Lib_VTK_IO) 2013-04-16 10:20:22 +00:00
Martin Diehl aee8196b32 example test for Abaqus now takes files from examples folder, both Abaqus test take now *.env from installation/mods_abaqus 2013-03-26 12:06:19 +00:00
Mahesh Balasubramaniam 7fd1dca4f5 corrected a little mistake on line 145 that sets the maximum value of XYZ values to be 1.0 2013-03-25 20:18:30 +00:00
Martin Diehl cb8a7e7d25 new function to compare tables both located in current directory 2013-03-19 15:46:07 +00:00
Martin Diehl 43ec1d2051 added output of perceptual unfiform colormaps to GOM (DIC Aramis) format, deleted some old files in the documentation folder 2013-03-19 15:19:46 +00:00
Martin Diehl 3660b2a245 added functionality to check for available licenses to damask/environment.py, now using this functionality + a check for the correct version before starting Abaqus6.12.2_compileIfort/run_test.py and Abaqus6.12.2_example/run_test.py 2013-03-04 19:39:13 +00:00
Martin Diehl b94caae041 added missing import of os 2013-02-19 15:57:51 +00:00
Philip Eisenlohr d8da2f60d8 added core module function math_periodicNearestNeighborDistances 2013-02-19 14:56:26 +00:00
Philip Eisenlohr 0047c32411 dropped ./fftw in favor of /usr/local as FFTW default install path 2013-02-19 13:35:38 +00:00
Philip Eisenlohr 9d32e51da8 more verbose explanations 2013-02-15 08:38:58 +00:00
Philip Eisenlohr fc9ecc7ed5 fixed bugs in HSL2RGB and the two CIE conversions.
streamlined interpolation.
2013-02-02 20:17:02 +00:00
Philip Eisenlohr 95c74961dd polished syntax here and there. 2013-02-02 15:11:55 +00:00
Martin Diehl b0263a8aab added possibility to parse options for setup_code.sh and setup_processing.sh + other improvements in setup functionality 2013-02-01 12:21:56 +00:00
Philip Eisenlohr 0dabe29657 ignore problems when importing (outdated) core module during its rebuilding. 2013-02-01 11:45:20 +00:00
Philip Eisenlohr 20060b4275 added pathInfo parsing of $shellVariables. These are now interpreted as absolute path (used to be wrongly considered relative...) 2013-02-01 11:30:57 +00:00
Martin Diehl e74b5da19a changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
Martin Diehl 96577b18fb introduced error code for run_test.py 2013-01-23 18:33:46 +00:00
Mahesh Balasubramaniam a1f0ed483c export method with format and revised crop options added to the Colormap class. 2013-01-18 17:17:50 +00:00
Martin Diehl b018934b45 simplified code, added functionality to export raw list 2013-01-16 18:45:10 +00:00
Mahesh Balasubramaniam 7ac7d1a657 new tool for creation of colormaps, now using proper classes 2013-01-15 18:24:10 +00:00
Martin Diehl 0d4db957f8 started to rearrange testing folder 2013-01-14 15:20:17 +00:00
Martin Diehl fd0e096256 rewrote colormaps to use classes 2013-01-08 18:47:44 +00:00
Mahesh Balasubramaniam 820b8eb2c1 put colormap related functions into library, renamed and added scripts for creation of colormaps 2013-01-04 13:57:36 +00:00
Martin Diehl e3970ce152 added detection of Marc 2012 in postResults (lib/damask/solver/marc.py)
added test for Marc 2012 and updated old tests from 2010 to 2012
2012-12-13 17:50:00 +00:00
Martin Diehl 7848e933bb wrong file was selected during last commit 2012-12-12 17:10:04 +00:00
Philip Eisenlohr dc746119e3 introduced two more helper functions:
- labels_index
- data_asArray
2012-12-06 21:46:19 +00:00
Martin Diehl 549ea3c1e6 updated restart test to use the new table comparison facilities and check the new basic solver (part 1, there is some problem with renaming) 2012-11-23 17:21:18 +00:00
Martin Diehl 11ed7fab86 corrected bug in curl calculation causing the output of transposed tensor (according to information stored in testing/9102/proof/Curl of Tensor - Physics Forums.pdf)
addCurl test is now done against analytical solution and working, added it to list of automated tests.
small improvements on test.py
2012-11-23 15:16:51 +00:00
Martin Diehl 565713fecb improve functionality to compare ASCII tables 2012-11-22 18:01:51 +00:00
Martin Diehl a40b73dc72 for array comparison, only values are taken into consideration that are non zero in array 1 AND array 2 2012-11-21 15:37:59 +00:00
Martin Diehl 78aa010565 now just comparing substring to figure out if setup_processing was importing the core module 2012-10-25 12:40:06 +00:00
Martin Diehl 868984cb89 import of damask.core will not complain any more if done in setup_processing.py, however setup_processing.py will check if core.so exist after compilation and delete it before compilation 2012-10-25 07:55:27 +00:00
Martin Diehl 398643a3b1 made exception in case of non-working f2py code (core.so) again verbose 2012-10-10 16:38:02 +00:00
Martin Diehl 7ad3ce62e7 added hint if test don't support update 2012-10-09 07:37:48 +00:00
Claudio Zambaldi 1585fbe927 improved material.config writer class
includes example of usage
should replace material.py, after the tests 
have been confirmed to work with it

mat=damask.Material()
m=mat.example_1()
m.write(file='material.config_<descriptive-label>')
2012-09-07 18:25:25 +00:00
Martin Diehl 96ba5ecae4 moved some more 'mesh related' functions for post processing from math.f90 to mesh.f90
f2py functions remaining in math.f90 now uses assumed size arrays in order to have simpler interfaces. This is only working with python 2.7!
changed python pre- and postprocessing scripts.
If you encounter any problems whith core modules, try to remove the old core.so in the lib/damask
2012-08-27 08:04:47 +00:00
Mahesh Balasubramaniam 87bec7eafa added test to check if lab-to-load rotation is done properly, small improvement on test.py 2012-08-14 13:23:50 +00:00
Martin Diehl ee1bde0cd7 enabling regridding more than once by introducing deallocation of arrays
added J2 test (stub from Taymour)
2012-07-31 15:37:49 +00:00
Martin Diehl 8a64be7d1b added restart-test to list of automated tests, improved reporting of tests 2012-07-26 07:47:31 +00:00
Claudio Zambaldi 9078d70af0 polishing, and using numpy's deg2rad/rad2deg 2012-07-19 16:05:05 +00:00
Claudio Zambaldi b2a7f85101 __init__ of damask package not crashing in python 2.5 if core module not available
added some Matlab-like utility functions (damask.sind, cosd, tand, acosd, ...)  that take and return degree instead of radians
2012-07-18 13:46:33 +00:00
Martin Diehl 95d292b286 2012-07-18 12:31:07 +00:00
Martin Diehl 3cb1d7e31f replaced FFTW libs with new version 3.3.2 2012-07-17 13:27:51 +00:00
Martin Diehl fe3b537851 added some useful functions for copying and comparison and renamed some functions in the lib file; changed the tests accordingly 2012-07-17 13:04:57 +00:00
Martin Diehl 7847816044 changed back to previous (working) version 2012-07-05 20:27:05 +00:00
Mahesh Balasubramaniam ca83c6082a 2012-07-05 11:21:06 +00:00
Philip Eisenlohr 9490c8a3c1 corrected to consistent naming: "IMKL" finally ;-) 2012-07-03 12:59:19 +00:00
Philip Eisenlohr bf4d47266e corrected to consistent naming: "IMKL"
changed dummy entry for FFTW to usr/local
2012-07-03 12:41:29 +00:00
Martin Diehl b2fd3e1180 introduced preprocessor identifiers Marc, Abaqus, and Spectral to enable conditional compilation. This allows deleted dummy functions that are used by one solver only.
Mainly affected modules are IO and mesh. Most of the changes in mesh result from reordering the functions when grouping them depending on their solver.
Further advantage is that FE solver do not need FFTW and kdtree2 anymore. The include files for these two libraries moved to DAMASKROO/lib now as I figured out how to use a include path in the Makefile.
Put all the files I got when testing compilation with abaqus in a folder which to become the abaqus compilation test.
2012-06-15 16:10:21 +00:00
Martin Diehl e18a6f6c7f again small adjustments for the automatic testing 2012-05-29 09:59:04 +00:00
Martin Diehl 34777e3df8 some smaller improvements on the intel compilation test 2012-05-25 15:11:00 +00:00
Taymor El Achkar be355c8f40 updated reference result for compile test
added dislotwin law to hex elastic test and drastically increased loading time. still the question why Young's modulo is increasing.

added possibility to add crystallite microstructure in material.py
2012-05-24 16:00:32 +00:00
Martin Diehl 77c066d0a8 corrected error handling to work with older python versions 2012-05-10 09:38:55 +00:00
Martin Diehl 331ef7ad68 made init of python module more verbose in case core modules cannot be loaded 2012-05-03 19:00:34 +00:00
Martin Diehl 31753be16f updated setup/setup_processing.py with new files
added data_readLine(LINE) and data_skipLines(LINES) for ascii table
2012-04-18 11:42:57 +00:00
Martin Diehl efd653fb00 removed old *.output* and *.spectralOut as they are not updated anyway from reference.
introduced a numbering scheme for variants
calculated new reference results due to slight changes
2012-03-09 16:30:42 +00:00
Martin Diehl 3f1c16e079 removed headerLen completely, use len(self.info)+1 instead 2012-03-09 14:18:48 +00:00
Martin Diehl ee6b1eb22c elastic phenopowerlaw for hex crystals is working, results are close to analytic ones but there is a small "elastic hardening" and the values are a little bit higher than the ones calculated with mtex 2012-02-24 14:34:44 +00:00
Martin Diehl 7ce583405f made copy_Current2Current and copy_Current2Current in testclass more verbose, added numerics with fixed seed to compile test to get always exactly the same results 2012-02-23 17:44:09 +00:00
Philip Eisenlohr 6b8bebad49 removed unused headerLen property. added info_clear() method 2012-02-23 13:54:38 +00:00
Martin Diehl a8f4fc76b3 made results better visible 2012-02-23 09:23:37 +00:00
Philip Eisenlohr 58fdf4ebfc improved STDOUT | STDIN constructs -- no more broken pipe left-overs (I hope) 2012-02-16 18:42:04 +00:00
Philip Eisenlohr c24f258eba now works with piped STDOUT | STDIN constructs. 2012-02-16 18:03:14 +00:00
Philip Eisenlohr ae8ec80dd0 croaking about missing core module now goes to STDERR (formerly this influenced piped STDOUT detrimentally...) 2012-02-16 18:02:15 +00:00
Martin Diehl 4c59015a78 further simplified creation of tests by moving the option parsing to the general test class 2012-02-15 20:54:14 +00:00
Philip Eisenlohr d642730776 added method to set data value in given column (by name) 2012-02-15 14:50:51 +00:00
Philip Eisenlohr 8671b8ed38 script to delete existing columns from ASCIItable 2012-02-14 12:04:37 +00:00
Martin Diehl 7960600dbe improved updating of reference results 2012-02-09 14:41:18 +00:00
Philip Eisenlohr a3e47b2d65 added method to return data as list of floats.
safer check whether ASCII file has ended.
2012-02-02 17:13:51 +00:00
Claudio Zambaldi 7dd67e3ebb improved creation of material.config files, mostly done by Philip 2012-02-01 19:44:36 +00:00
Martin Diehl e87296b10a added debug output for tests, corrected bug reporting number of successful tests 2012-01-31 13:10:14 +00:00
Martin Diehl 2a89d9b81a simplified compilation testing by introducing some small helper functions for common tasks, continued to rename 2012-01-27 09:55:19 +00:00
Martin Diehl 20a775e8d1 small improvements (more output to screen) 2012-01-26 15:26:21 +00:00
Martin Diehl becb863110 added test for gfortran and gfortran vs intel, renamed intel test to new numbering scheme and changed to new div criterion
introduced "try" statement in lib/damask/test/test.py to avoid crash if a test variant fails
2012-01-25 15:14:31 +00:00
Claudio Zambaldi 2b8e0b27fc a rough version of a t16 to vtk converter
needs polishing to be used with damask python package
paraview plotting is useful if you want semi-transparent iso-surfaces
2012-01-24 14:26:13 +00:00
Philip Eisenlohr 3c87d20353 added capability to rewind to beginning of data 2012-01-19 20:37:53 +00:00
Philip Eisenlohr 4eb754b1fb added release '2011'.
added toolsPath() method.
added optional release hinting for path determinations.

streamlined submit_job method.
2012-01-18 09:41:10 +00:00
Philip Eisenlohr 0b4b154abb reworked class definition.
now follows workflow of
1. clean
2. prepare
3. run
4. postprocess
5. compare/update

added file-structural helper functions.
2012-01-18 09:34:49 +00:00
Philip Eisenlohr aba4703463 added property "headerLen" 2012-01-18 09:30:50 +00:00
Christoph Kords 7f94b3f267 subroutine path was not correct 2012-01-17 09:28:52 +00:00
Christoph Kords 684cac1206 corrected typo 2012-01-17 08:44:57 +00:00
Philip Eisenlohr 48729ff2e1 modified testing class to use generic "damask" module.
removed obsolete individual class definitions.
2012-01-16 15:18:43 +00:00
Martin Diehl dd1e968908 setup_processing.py uses damask module but builds the core part of it, therefore made the use damask.core optional by setting a try statement in __init__.py and a "from damask import xxx" 2012-01-04 11:06:24 +00:00
Philip Eisenlohr 35bd460e39 added "core" package capability to processing
(renamed former f2py modules)

reverted pathinfo...
2011-12-22 10:36:59 +00:00
Philip Eisenlohr 429af90ccb added Id flag and content
added "core" package capability
2011-12-22 10:30:25 +00:00
Krishna Komerla f463c2da70 added addCurl.py, not sure if it works correctly. still in old (eq. to addDivergence.py) style 2011-12-21 17:25:31 +00:00
Philip Eisenlohr 06cb99d156 restructured location of FFTW libs 2011-12-21 13:09:55 +00:00
Philip Eisenlohr 8be14ef72e now aware of blank and comment lines in pathinfo 2011-12-20 10:55:47 +00:00
Philip Eisenlohr c5d64df287 example for new syntax and options. 2011-12-20 10:20:42 +00:00