Philip Eisenlohr
9280b0a4e2
fixed bug where configuration wrote floating point numbers for grain IDs and texture IDs.
2013-09-23 18:35:30 +00:00
Martin Diehl
1915215c6f
commented out not working use of vtk class
2013-09-20 11:27:11 +00:00
Martin Diehl
3eb8aa1362
checked for python3 compatibility:
...
use "print('foo')" instead of "print 'foo'"
and "except(error) as e" instead of "except error,e"
2013-09-14 10:52:02 +00:00
Martin Diehl
a17b85cba8
deleted wrong colormap script, was there twice. correct one (modified recently by Philip) is called perceptualUniformColormap
2013-09-11 08:15:05 +00:00
Martin Diehl
022696c8f3
fixed output to screen
2013-09-11 07:45:42 +00:00
Philip Eisenlohr
538a471246
updated $Id$ handling.
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added (colored) my script's name reporting.
2013-09-09 14:12:00 +00:00
Philip Eisenlohr
ec6587e7f5
corrected help message
2013-09-09 14:11:16 +00:00
Philip Eisenlohr
f02ee16b3d
fixed missing comma in "pre" symlinking list.
2013-09-09 14:09:38 +00:00
Philip Eisenlohr
b3463b2ed6
added intel openmp library to linking list. (-liomp5 was necessary when using IMKL...)
2013-09-09 14:08:44 +00:00
Christoph Kords
7bbee3fe60
write size as exponential not float, otherwise small numbers get rounded (to zero)
2013-08-21 15:25:27 +00:00
Franz Roters
4f7cd76b29
renamed texture_rotation into texture_transformation
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changed keyword for material.config to axes in line with geom_fromAng.py
former keyword rotation is still recognized for compatibility
2013-07-24 11:09:39 +00:00
Pratheek Shanthraj
d2ccc06aee
added line break between rotation and euler angle information for correct parsing of config file
2013-07-23 14:33:30 +00:00
Pratheek Shanthraj
c8cc397bf4
small bug fix
2013-07-23 12:40:26 +00:00
Christoph Kords
26df077c2a
translating scalar data that contain vector components to vector data
2013-07-22 08:24:04 +00:00
Martin Diehl
69b3359047
forgot in last commit
2013-07-18 13:31:40 +00:00
Martin Diehl
2201a73a46
added (?correct and working?) rotation for conversion from ANG and updated bold verbosity of all other scripts
2013-07-18 13:28:54 +00:00
Martin Diehl
a39005ef1c
added possibility to specify formula with array return type
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added support for numpy
2013-07-16 21:48:23 +00:00
Philip Eisenlohr
7d5f1270d5
fixed nasty bug that prevented proper grid rescaling
2013-07-16 21:11:44 +00:00
Philip Eisenlohr
cb09c17fa2
simplified $Id treatment.
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now reports own name in bold during runtime.
2013-07-10 09:15:42 +00:00
Philip Eisenlohr
31e0469b34
changed key "grains" to "microstructures" to be consistent with .geom description later.
2013-07-10 09:14:53 +00:00
Philip Eisenlohr
f75604c235
fixed bug in output of origin (reported size instead)
2013-07-10 09:13:21 +00:00
Philip Eisenlohr
fafa69b846
added possibility to have microstructure indices for seed points. Hence, multiple seed points can belong to the same final grain.
2013-07-10 09:12:00 +00:00
Philip Eisenlohr
0fa9f7dc22
can now show data for tables lacking column labels (use option --nolabels)
2013-07-08 11:56:16 +00:00
Pratheek Shanthraj
930e605afc
bug fixes and more optimizations
2013-07-03 00:48:21 +00:00
Pratheek Shanthraj
34ef7b0f34
now fully anisotropic grain growth possible by setting up the function "interfacialEnergy"
2013-07-02 04:32:32 +00:00
Pratheek Shanthraj
5ff8a7067e
fixed bug and re-reverted to faster version. added python multiprocessing functionality. polishing and renaming
2013-07-01 17:15:24 +00:00
Philip Eisenlohr
89cea68bc5
now using ASCIItable object and numpy array.repeat --> about 50x faster for large geoms (i.e. several mio voxels).
2013-06-30 19:11:16 +00:00
Philip Eisenlohr
39758f5c53
removed twoD option remnants
2013-06-30 19:09:01 +00:00
Philip Eisenlohr
1f891c544d
now using ASCIItable object (much faster file writing).
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(temporarily) switched back to rev2496 logic...
changed to diffusion distance as command line argument (instead of taking sqrt(time))
2013-06-30 13:51:21 +00:00
Philip Eisenlohr
dd3d53e238
simplified grid/size synonyms treatment
2013-06-30 13:47:01 +00:00
Philip Eisenlohr
21c4447955
polishing and code unifications
2013-06-30 12:35:04 +00:00
Philip Eisenlohr
24fc14c2f3
fixed small syntax error introduced in last commit...
2013-06-30 00:46:52 +00:00
Philip Eisenlohr
77aa1c27b0
now based on damask.ASCIItable object
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continue with next if one file is broken (used to stop!)
packing of already packed works now
overall speed improvement
standard unpacked output is 2D: use -1/--onedimensional for linear list
2013-06-30 00:39:48 +00:00
Philip Eisenlohr
fcc2736431
now based on damask.ASCIItable object
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continue with next if one file is broken (used to stop!)
improved index substitution and adopted more numpy functions --> notably faster
2013-06-30 00:37:03 +00:00
Philip Eisenlohr
f204c38d4d
now based on damask.ASCIItable object
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continue with next if one file is broken (used to stop!)
switched to numpy functions for geom reshaping and writing --> 10x faster
2013-06-30 00:34:16 +00:00
Philip Eisenlohr
7d6035dcfa
now based on damask.ASCIItable object
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continue with next if one file is broken (used to stop!)
2013-06-30 00:31:44 +00:00
Philip Eisenlohr
da1b4ff05b
now based on damask.ASCIItable object
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switched to numpy functions for grid generation --> about 20x faster.
2013-06-30 00:30:06 +00:00
Philip Eisenlohr
b2c8a7e345
removed tabs (and extended tab-awareness of pre-commit hook to python scripts)
2013-06-29 21:14:58 +00:00
Martin Diehl
e3a1e70542
started to use vtk class for writing results
2013-06-27 18:21:20 +00:00
Pratheek Shanthraj
4537720895
faster version for large number of grains. now performing diffusion on a small window around each grain where window around each grain is obtained cheaply
2013-06-27 16:57:14 +00:00
Philip Eisenlohr
034a6bc926
grid dimension can be changed by factor ("2x"), or left alone with number <= 0.
...
now understands packed geom structure.
2013-06-27 15:35:49 +00:00
Philip Eisenlohr
5f347648e1
now understands packed geom structure
2013-06-27 15:34:37 +00:00
Harsha Phukan
76171eec15
added possibility for factors---indicated by "x" at the end---and left-alone condition now comprises "0" as well as "negative numbers. understands packed structures, too.
2013-06-27 12:58:12 +00:00
Christoph Kords
13227dff0f
corrected calculation of origin
2013-06-22 14:13:29 +00:00
Philip Eisenlohr
8b5ba9f8f0
now understands packed geom-files (much faster processing...)
2013-06-21 21:19:14 +00:00
Philip Eisenlohr
4cf2e75dc1
justification of numbers done with space instead of "0"s
2013-06-21 21:18:10 +00:00
Philip Eisenlohr
e53c67f0e0
added black list for immutable microstructures.
...
now able to parse packed geom-files.
2013-06-21 21:17:03 +00:00
Philip Eisenlohr
3b4573301c
removed now obsolete Moore neighborhood array
2013-06-21 19:10:10 +00:00
Philip Eisenlohr
5d15f68914
added help description.
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fixed bug for grain index (+1).
renamed some variables and added a few comments.
2013-06-21 19:08:20 +00:00
Pratheek Shanthraj
2e8756b724
faster version of smoother using the scipy gaussian filter to get the diffused microstructure and vectorized sharpening of the diffused microstructure
2013-06-21 16:59:49 +00:00
Philip Eisenlohr
45951e27c5
script to smooth out interface roughness in a (polycrystal) geom
2013-06-20 19:45:25 +00:00
Christoph Kords
0740845d81
allow coordinates to not be in consecutive columns
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keep origin of original data set
2013-06-20 07:36:35 +00:00
Christoph Kords
e6499e1a39
renamed script in order to distinguish from "add" scripts that act on ascii tables
2013-06-13 09:05:30 +00:00
Ding Wang
920195809c
fixed bug in auto determination of size and grid
2013-06-11 10:11:14 +00:00
Martin Diehl
becacb675a
linear reconstruction no longer needed for odd resolution
2013-06-05 14:05:11 +00:00
Martin Diehl
e635b06270
last polishing on preprocessing scripts, documentation and scripts are all up to date.
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added addSchmidfactors to post processing scripts
2013-06-04 12:56:57 +00:00
Philip Eisenlohr
32a16f9745
wildcard matching for column headings, e.g. "[159]_p" to extract only the diagonal elements (scalars) of stress, or "[1-9]_p" to extract all nine values.
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fixed VTK file format problem where double precision floats were incorrectly interpreted because they were announced as "float" (now "double").
2013-05-29 10:24:00 +00:00
Martin Diehl
a21dd816c7
init reporting of constitutive_*.f90 had less/to much spaces, renamed label to LABEL because it is a parameter.
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removed debug output of geom_fromEuclideanDistance.py
2013-05-28 17:31:55 +00:00
Christoph Kords
837574278e
removed (now) unused function for reading of configFile
2013-05-28 14:47:50 +00:00
Christoph Kords
10a32dc17b
use predefined maps in damask.Colormap class; no need for a colorMap config file anymore
2013-05-28 14:18:21 +00:00
Philip Eisenlohr
8fd590d7bd
added red--blue map
2013-05-24 07:41:44 +00:00
Christoph Kords
19dc95a915
now able to choose vector that is used for warpvector filter via option.dispLabel
2013-05-22 21:23:01 +00:00
Christoph Kords
75ee54146b
deleted unused function
2013-05-22 21:20:00 +00:00
Martin Diehl
b3a90a8a3b
last changes on preprocessing tools, only documentation needs to be done
2013-05-17 16:44:03 +00:00
Martin Diehl
17b81fda7c
still improving preprocessing scripts
2013-05-15 17:23:21 +00:00
Martin Diehl
53348db000
tested the modified scripts, all scripts generating geometry now named geom_from...
2013-05-15 16:02:38 +00:00
Martin Diehl
0b4a5cfa9b
geom_check is now using vtk class, other scripts stop execution in case of invalid grid or size
2013-05-14 21:09:37 +00:00
Martin Diehl
9093cf2072
polishing, unifying,simplifying
2013-05-14 17:51:53 +00:00
Martin Diehl
2acd737859
polishing, unifying,simplifying
2013-05-14 17:19:36 +00:00
Martin Diehl
563e74c832
now also using numpy
2013-05-14 17:00:41 +00:00
Martin Diehl
b2c50124b5
more improvements on structure, comments and header generation of pre processing tools
2013-05-13 13:10:31 +00:00
Martin Diehl
52af9aaabf
made spectral preprocessing more verbose (now reporting changes on header) and aware of new keywords, added coding information below shebang
2013-05-13 11:27:59 +00:00
Christoph Kords
deb2bd7dca
added option to only process ip or node based geometry/data
2013-05-13 10:06:40 +00:00
Christoph Kords
7f7cd0732d
improved visualization of script results
2013-05-13 09:36:19 +00:00
Christoph Kords
193c77f526
corrected prediction of computation time
2013-05-09 11:33:40 +00:00
Christoph Kords
ed1674ee1c
changed default value of eulerangles label
2013-05-09 11:32:34 +00:00
Christoph Kords
2d4cb6d128
first point on slice always starts at (0,0)
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added option to visualize results
2013-05-08 15:59:51 +00:00
Christoph Kords
bd33169118
mistakenly committed table2ang in rev 2380, instead of vtk2ang. reverted changes in table2ang
2013-05-08 15:58:17 +00:00
Christoph Kords
ed9413a008
added simple output about progress
2013-05-07 14:32:38 +00:00
Christoph Kords
543cbf3a14
first point on slice always starts at (0,0)
2013-05-07 13:18:26 +00:00
Christoph Kords
c7f987a3c1
"unitlength" parameter, which determines the physical size of the mesh, now available as a global mesh variable "mesh_unitlength" and written to the .mesh file during init.
...
Hence, it is available to the marc_deformedGeometry.py script via "mesh_init_postprocessing()" and "mesh_get_unitlength()", so no need for setting the scaling of the displacement vectors explicitly through an option; now displacements and nodal positions are always consistent
2013-05-07 13:06:29 +00:00
Christoph Kords
9656d06fcc
- all length in nag file in micrometer
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- "size" option replaced by "scale": uniform scaling of all length
- default normal in negative z-direction
- more output in verbose mode
- ang file numbering starts with 1
- positions in ang file in TSL, not lab frame
2013-05-07 12:57:34 +00:00
Christoph Kords
278198121d
only import vtk classes that were used
2013-05-06 16:55:44 +00:00
Christoph Kords
2371bd9f57
correct extension ".py" for "table2ang" and "vtk2ang"
2013-05-06 16:43:05 +00:00
Christoph Kords
f5482ffbf4
new script that generates ang files for slices through vtk data set
2013-05-06 16:37:54 +00:00
Christoph Kords
43647fc5e6
use datatype double instead of float for ouputs
2013-04-30 14:45:29 +00:00
Christoph Kords
12ca2c1931
added scaling option for displacements
2013-04-29 16:02:30 +00:00
Christoph Kords
9afaa9f4d0
set "line breaks" and "keywords" property
2013-04-29 09:24:07 +00:00
Christoph Kords
fbb8353bba
check if data set attribute is already present
2013-04-29 09:23:16 +00:00
Christoph Kords
cc72c0b17b
added two new scripts:
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"marc_extractData" is a simple variant of the "postResult" script that extracts all data from a macro *.t16 file (quadratic elements not yet supported) and writes it into an asciitable
"addDataToGeometry" searches for corresponding *.txt and *.vtk file in a given directory and adds the data from the *.txt file as SCALARS to the *.vtk file
first script needed an additional function in mesh that returns the corresponding node of a given ip in a specific element
2013-04-28 20:56:17 +00:00
Martin Diehl
a003d14824
grid and size for vicinityOffset, small changes for other scripts
2013-04-25 16:51:32 +00:00
Martin Diehl
5d8664e230
updated to new keywords + more verbosity
2013-04-25 15:53:41 +00:00
Martin Diehl
7cbf107751
removed misplaced new line statement
2013-04-24 11:07:05 +00:00
Christoph Kords
650b7ef4ac
added python script that produces vtk files with the (node based and ip based) deformed mesh from marc output file
2013-04-23 18:30:56 +00:00
Pratheek Shanthraj
aa07656a90
exchanged final two occurrences of "grains" to "microstructures"
2013-04-18 13:53:13 +00:00
Martin Diehl
06c872d404
added libs.f90 to core module compilation, didn't work because kdtree2 wasn't there
2013-04-17 17:39:52 +00:00
Philip Eisenlohr
b572c71db0
fixed small bug in error reporting (missing column head complaint was broken...)
2013-04-16 20:10:17 +00:00
Martin Diehl
d971a32516
changed keywords, now also printing out altered size/grid/microstructures information
2013-04-16 18:00:14 +00:00
Martin Diehl
2ff0f1b93e
keywords update from resolution/dimension to grid/size
2013-04-12 14:13:32 +00:00
Martin Diehl
b4f67248a5
deleted two simple scripts used for debugging but with almost no use any more
2013-04-12 13:22:15 +00:00