63569b19b6
added use of "defaultdict" from collections
2014-02-28 15:56:28 +00:00
27c83f60a6
fixed typo
2014-02-26 15:05:34 +00:00
7f08c976c3
skip file if mandatory column not found in ASCIItable
2014-02-26 14:56:06 +00:00
98a8b47a09
can now read legacy VTK files with unstructured grid data
2014-02-24 19:23:08 +00:00
a659d071a9
added '--degrees' option to indicate Euler angles unit
2014-02-10 18:01:21 +00:00
85e4896478
"--degrees" option to specify Euler angles in degrees (instead of radians)
2014-02-09 20:36:42 +00:00
3c2af8e7a6
fixed dropped file handle when flushing closed output...
2014-01-29 21:16:44 +00:00
24d7f55f55
check whether output is already stopped (in command piping for instance)
2014-01-29 21:13:36 +00:00
cd18ec2abf
removed unneccesary table.data_rewind, which breaks command piping
2014-01-29 21:03:56 +00:00
ee99216edc
polishing compile_CoreModule, bug fix for Makefile
2014-01-28 07:34:13 +00:00
1bd456aa22
corrected options.error --> parser.error
2014-01-27 14:30:37 +00:00
a1cfc85d74
produce VTK unstructured grid with voxels around all points given in an ASCIItable.
2014-01-27 14:10:29 +00:00
13fed38a2f
add scalar and RGB tuples from ASCIItable to existing VTK voxel cloud (*.vtu)
2014-01-27 14:05:03 +00:00
0f101c8dbf
adopted to improved HDF5 format
2014-01-13 16:22:01 +00:00
a614e76968
first post processing script for HDF5 output
2014-01-07 20:42:51 +00:00
e20ffb379d
changed numpy.readtxt logic from "data_asArray" returning a copy to inplace "data_readArray" now directly storing into self.data
2013-12-14 03:51:22 +00:00
600389ac44
new script to sort ASCIItable according to (multiple) columns
2013-12-14 03:48:50 +00:00
0f8790c148
clarified help string
2013-12-12 08:48:57 +00:00
10c8a1a3ce
corrected typo in usage hint
2013-12-12 02:35:01 +00:00
894776ca67
fixed stupid bug addressing a dict by dict{key} instead of dict[key]
2013-12-11 14:30:27 +00:00
44b3687e7c
added option to invert output data range (1.0 -- 0.0 instead of 0.0 -- 1.0)
2013-12-10 00:27:22 +00:00
e4cea31a9d
small bug fix: options.error --> parser.error
2013-12-09 15:58:35 +00:00
e2d4cc8b3d
fixed former nonsense definition of lab frame direction
2013-12-09 15:57:21 +00:00
26690859bb
deal more gracefully with problematic user input.
2013-12-09 15:54:47 +00:00
090fca8683
deleted left-over debug statement
2013-11-26 20:24:40 +00:00
d498eca242
deleted left-over debug statement
2013-11-26 20:22:52 +00:00
b63d2eafe8
new scripts for:
...
-generating vtk point cloud from x,y,z ASCIItable data
-adding scalar values and color tuples from ASCIItable to vtk point cloud
-permuting data in ASCIItable columns (used to shuffle ordered grain indices)
2013-11-26 20:19:27 +00:00
a45c7dbb62
new ASCIItable scripts to add
...
- quaternion and/or Euler representation of lattice orientation (given in rotation matrix, etc.)
- RGB color code of crystal direction in laboratory frame (matching closely the TSL-OIM scheme of inverse pole figures).
2013-11-25 19:11:02 +00:00
feaccae652
set threshold for values treated as zero to 1.e-12 (was 1.e-15) to avoid flip in strain direction
2013-11-19 19:39:14 +00:00
1915215c6f
commented out not working use of vtk class
2013-09-20 11:27:11 +00:00
a17b85cba8
deleted wrong colormap script, was there twice. correct one (modified recently by Philip) is called perceptualUniformColormap
2013-09-11 08:15:05 +00:00
022696c8f3
fixed output to screen
2013-09-11 07:45:42 +00:00
538a471246
updated $Id$ handling.
...
added (colored) my script's name reporting.
2013-09-09 14:12:00 +00:00
ec6587e7f5
corrected help message
2013-09-09 14:11:16 +00:00
26df077c2a
translating scalar data that contain vector components to vector data
2013-07-22 08:24:04 +00:00
a39005ef1c
added possibility to specify formula with array return type
...
added support for numpy
2013-07-16 21:48:23 +00:00
0fa9f7dc22
can now show data for tables lacking column labels (use option --nolabels)
2013-07-08 11:56:16 +00:00
e3a1e70542
started to use vtk class for writing results
2013-06-27 18:21:20 +00:00
13227dff0f
corrected calculation of origin
2013-06-22 14:13:29 +00:00
0740845d81
allow coordinates to not be in consecutive columns
...
keep origin of original data set
2013-06-20 07:36:35 +00:00
e6499e1a39
renamed script in order to distinguish from "add" scripts that act on ascii tables
2013-06-13 09:05:30 +00:00
becacb675a
linear reconstruction no longer needed for odd resolution
2013-06-05 14:05:11 +00:00
e635b06270
last polishing on preprocessing scripts, documentation and scripts are all up to date.
...
added addSchmidfactors to post processing scripts
2013-06-04 12:56:57 +00:00
32a16f9745
wildcard matching for column headings, e.g. "[159]_p" to extract only the diagonal elements (scalars) of stress, or "[1-9]_p" to extract all nine values.
...
fixed VTK file format problem where double precision floats were incorrectly interpreted because they were announced as "float" (now "double").
2013-05-29 10:24:00 +00:00
837574278e
removed (now) unused function for reading of configFile
2013-05-28 14:47:50 +00:00
10a32dc17b
use predefined maps in damask.Colormap class; no need for a colorMap config file anymore
2013-05-28 14:18:21 +00:00
8fd590d7bd
added red--blue map
2013-05-24 07:41:44 +00:00
19dc95a915
now able to choose vector that is used for warpvector filter via option.dispLabel
2013-05-22 21:23:01 +00:00
75ee54146b
deleted unused function
2013-05-22 21:20:00 +00:00
53348db000
tested the modified scripts, all scripts generating geometry now named geom_from...
2013-05-15 16:02:38 +00:00
deb2bd7dca
added option to only process ip or node based geometry/data
2013-05-13 10:06:40 +00:00
7f7cd0732d
improved visualization of script results
2013-05-13 09:36:19 +00:00
193c77f526
corrected prediction of computation time
2013-05-09 11:33:40 +00:00
ed1674ee1c
changed default value of eulerangles label
2013-05-09 11:32:34 +00:00
2d4cb6d128
first point on slice always starts at (0,0)
...
added option to visualize results
2013-05-08 15:59:51 +00:00
bd33169118
mistakenly committed table2ang in rev 2380, instead of vtk2ang. reverted changes in table2ang
2013-05-08 15:58:17 +00:00
ed9413a008
added simple output about progress
2013-05-07 14:32:38 +00:00
543cbf3a14
first point on slice always starts at (0,0)
2013-05-07 13:18:26 +00:00
c7f987a3c1
"unitlength" parameter, which determines the physical size of the mesh, now available as a global mesh variable "mesh_unitlength" and written to the .mesh file during init.
...
Hence, it is available to the marc_deformedGeometry.py script via "mesh_init_postprocessing()" and "mesh_get_unitlength()", so no need for setting the scaling of the displacement vectors explicitly through an option; now displacements and nodal positions are always consistent
2013-05-07 13:06:29 +00:00
9656d06fcc
- all length in nag file in micrometer
...
- "size" option replaced by "scale": uniform scaling of all length
- default normal in negative z-direction
- more output in verbose mode
- ang file numbering starts with 1
- positions in ang file in TSL, not lab frame
2013-05-07 12:57:34 +00:00
278198121d
only import vtk classes that were used
2013-05-06 16:55:44 +00:00
f5482ffbf4
new script that generates ang files for slices through vtk data set
2013-05-06 16:37:54 +00:00
43647fc5e6
use datatype double instead of float for ouputs
2013-04-30 14:45:29 +00:00
12ca2c1931
added scaling option for displacements
2013-04-29 16:02:30 +00:00
9afaa9f4d0
set "line breaks" and "keywords" property
2013-04-29 09:24:07 +00:00
fbb8353bba
check if data set attribute is already present
2013-04-29 09:23:16 +00:00
cc72c0b17b
added two new scripts:
...
"marc_extractData" is a simple variant of the "postResult" script that extracts all data from a macro *.t16 file (quadratic elements not yet supported) and writes it into an asciitable
"addDataToGeometry" searches for corresponding *.txt and *.vtk file in a given directory and adds the data from the *.txt file as SCALARS to the *.vtk file
first script needed an additional function in mesh that returns the corresponding node of a given ip in a specific element
2013-04-28 20:56:17 +00:00
650b7ef4ac
added python script that produces vtk files with the (node based and ip based) deformed mesh from marc output file
2013-04-23 18:30:56 +00:00
b572c71db0
fixed small bug in error reporting (missing column head complaint was broken...)
2013-04-16 20:10:17 +00:00
b4f67248a5
deleted two simple scripts used for debugging but with almost no use any more
2013-04-12 13:22:15 +00:00
770712529d
one more bug fix related to scaling
2013-03-26 16:16:59 +00:00
ccef9d4f73
fixed scaling option
2013-03-26 14:18:29 +00:00
5b96c1d62a
scaling of deformation gradient fluctuations now possible in x,y,z independently (give array).
2013-03-22 15:09:55 +00:00
cd86a80c2b
corrected handling of default value and cases where the deformation gradient is not f
2013-03-19 18:22:14 +00:00
43ec1d2051
added output of perceptual unfiform colormaps to GOM (DIC Aramis) format, deleted some old files in the documentation folder
2013-03-19 15:19:46 +00:00
757c3e5a04
fixed bug in averageDown and updated test
2013-03-13 16:23:02 +00:00
30024af6c2
polished string concatenations
2013-02-14 21:33:11 +00:00
a7e7a857c3
readjusted color values to work nicely with Msh colorspace (as in ParaView)
2013-02-02 20:17:54 +00:00
ac562f4b8b
changed internal color mapping to damask.Colormap class
2013-02-02 15:12:43 +00:00
e74b5da19a
changed all remaining routines to fortran-fast arrays (geometry reconstruction etc.)
...
changed all remaining routines in f2py to more clever determination of array size (requires f2py >= 2.0)
enabled 3D visualize to work with odd resolution by switching to linear reconstruction
PLEASE NOTE: Redefinition of routines for f2py might cause trouble -> DELETE DAMASK_ROOT/lib/damask/core.so in this case
further changes: added pure statement where possible, polished, unified use of "Q" for "Quaternion" and reordered math to have similar routines together
2013-01-31 16:28:08 +00:00
963ff0c3ae
added support for tetrahedron element with 4 integration points (Marc ID 127)
2013-01-28 16:25:43 +00:00
e691ff1ea1
updated setup_processing and corrected descriptions for new scripts
2013-01-22 09:56:36 +00:00
a4abebfcbb
some potentially useful postprocessing scripts
2013-01-21 23:15:23 +00:00
5676330e93
parsing options and file handling for perceptually linear diverging and sequential colormaps
2013-01-18 17:15:30 +00:00
e51779579e
removed (unsupported) "--geom" option.
2013-01-18 13:01:43 +00:00
7ac7d1a657
new tool for creation of colormaps, now using proper classes
2013-01-15 18:24:10 +00:00
cd5197556b
sequential colormapping with options for desired color and type(increasing or decreasing) is now working
2013-01-04 19:50:39 +00:00
820b8eb2c1
put colormap related functions into library, renamed and added scripts for creation of colormaps
2013-01-04 13:57:36 +00:00
6ab79d5593
added options for parsing and the colormap. Customized colormap is written out as an xml file importable into paraview.
2013-01-04 12:04:05 +00:00
3242361c91
added a minor change to the string expression and the for loop.
2013-01-04 12:01:34 +00:00
7157e8f03c
changed some of the color-space conversion formulae.
2013-01-04 12:00:10 +00:00
a69aaa1315
Use scipy euclidean distance function instead of FMM (runs without skfmm
...
module installed)
2012-12-19 14:50:45 +00:00
260e4191a0
replaced tabs by spaces
2012-12-13 18:15:10 +00:00
dfb791bcaf
only complain about missing Mentat release if needed...
2012-12-12 08:33:42 +00:00
34645a7222
write warning about missing Mentat release to stderr instead of stdout
2012-12-12 08:21:59 +00:00
93d822aaa1
symmetric colormap always with pure white in the middle
2012-12-11 16:50:34 +00:00
726d1173e5
polishing
2012-12-07 17:46:28 +00:00
c4ef2e5925
bug fixes
2012-12-07 17:41:50 +00:00
eaf7072bc1
Vectorized checking of neighbourhood for unique microstructure
...
(faster)
M addEuclideanDistance.py
2012-12-07 10:50:34 +00:00
a37250eef4
script to add the Euclidean distance map from boundaries, triple lines, and quadruple points to an ASCIItable of a regular grid.
...
requires numpy, scipy, and skfmm...
2012-12-06 21:49:49 +00:00
Philip Eisenlohr