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DAMASK_EICMD
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1251 Commits

Author SHA1 Message Date
Philip Eisenlohr 1a7e6de970 LF line endings... 2011-11-03 13:00:22 +00:00
Philip Eisenlohr 4cac885bd0 added function to find out shared library path of most recent Mentat release 2011-11-03 12:59:51 +00:00
Philip Eisenlohr b5e6b754fb starting "lib" subfolder for shared goodies. 2011-11-03 12:19:26 +00:00
Philip Eisenlohr db12869c16 shifted back to main folder. small polish. 2011-11-03 12:18:07 +00:00
Philip Eisenlohr b847db969a changed "texture" to more correct "structure" 2011-11-03 12:07:41 +00:00
Philip Eisenlohr 4e8f36a133 remove $ID$ from first line (I am wondering how this could work...) 2011-11-02 18:49:53 +00:00
Martin Diehl 680ba9082f removed deadlock when calling IO_warning(33) 
polished IO_error and IO_warning
checked OpenMP critical statements in DAMASK_spectral.f90
corrected writing of headed in DAMASK_spectral.f90
 2011-11-02 14:38:42 +00:00
Claudio Zambaldi 447e69019c Introduced environment variable DAMASK_ROOT. 
It is set in the DAMASK root folder by running damask_env.sh
Much needed in the testing routines so far (try ./testing/run_tests.py)
damask_env.sh could also trigger other scripts to get to a working setup after fresh checkout. For example it could run 
./processing/setup/setup_processing.py
./code/setup/setup_code.py
if it finds that we have a fresh checkout.
 2011-10-27 17:55:42 +00:00
Martin Diehl 7fc8cd1949 improved testing scripts, now we have the first test running! 2011-10-27 08:48:23 +00:00
Martin Diehl 15c356c3a7 some small improvements regarding the rotation of the loadcase frame 2011-10-25 13:38:24 +00:00
Martin Diehl c13aa2a829 first try of implementing a rotation of the loadcase coordinate system. Seems to work so far for one loadcase and homogeneous materials. 2011-10-24 18:26:34 +00:00
Martin Diehl 1a68669ae9 had some problems with svn... 2011-10-24 17:42:12 +00:00
Martin Diehl 0f34d14bee again edited the makefile, no there is more flexibility in defining the libraries (FFTW and ACML) 
added the source of fftw-3.3.tar.gz to fulfill the GPL
set_python_env.py was forgotten during last commit (for testing)
 2011-10-24 16:57:51 +00:00
Martin Diehl 48aa5eb163 documentation on NaN 2011-10-24 16:27:44 +00:00
Martin Diehl eefe1c516b first working draft of automated code testing, run_tests.py assumes DAMASK is located under ~/DAMASK/ 
Tests so far only Marc2010
Next try, commit did not work...
 2011-10-24 16:25:59 +00:00
Martin Diehl 7642509a47 first working draft of automated code testing, run_tests.py assumes DAMASK is located under ~/DAMASK/ 2011-10-24 16:24:15 +00:00
Claudio Zambaldi e7a60988a1 modified exit number extraction 2011-10-24 13:02:08 +00:00
Claudio Zambaldi 93b2160c2f extract exit number from MSC out-file. Other MSC utility functions can also go into MSC_TOOLS class. 2011-10-24 12:59:46 +00:00
Martin Diehl 8ac1891b3c moved DAMASK_NaN to prec.f90 respectively prec_single.f90 as it is precision dependent 2011-10-20 16:46:11 +00:00
Philip Eisenlohr 9565852247 now checks file "processing/MSCpath" for predefined installdir. 
now checks validity of user-specified install version.
 2011-10-20 16:13:38 +00:00
Philip Eisenlohr 414bacb096 deleted unused vars. changed linking library info/path 2011-10-20 12:47:57 +00:00
Philip Eisenlohr ed08dfc2be added option to select between cell-centered (as before) or vertex-centered data 2011-10-20 12:29:59 +00:00
Philip Eisenlohr c78227cec1 added option to skip data points along x,y,z in case they are periodic images. relevant for vertex-centered data for which outer surface data is doubled, i.e. data(0,0,0) == data(Nx,Ny,Nz) 2011-10-20 12:28:39 +00:00
Philip Eisenlohr 64499328d1 general renaming (space in former ACML path did not work) 2011-10-20 12:25:39 +00:00
Philip Eisenlohr 3a0911ca89 added option to output RGB palette on terminal 
number of colors is now variable (default 32)
warning issued if MSC path not valid

new "redblue" sym colormap
 2011-10-20 11:59:15 +00:00
Martin Diehl ac342ad682 worked on the updating on increments, does not work properly until now 2011-10-19 09:05:02 +00:00
Krishna Komerla 0a46741a77 changing header to correct number of increments 2011-10-18 16:42:06 +00:00
Martin Diehl 9d3f74ce5f polishing 2011-10-18 14:46:07 +00:00
Martin Diehl 7746390688 using keywords to indicate geometry and loadcase 
enabled finetuning of FFTW
added some debugging options
reading in rotation of boundary conditions
using header in geometry file
corrected error in calculating tolerance for stress BC
polishing of output, variable declaration, and variable names
 2011-10-18 14:45:32 +00:00
Martin Diehl 9a6977b024 changed commandline parameters into a keyword driven form 
use "-l, --load, --loadcase" to specify loadcase file and 
"-g, --geom, --geometry" to specify geometry file
!incremental update, wait for commit of damask_spectral.f90 before checking out
 2011-10-18 09:25:17 +00:00
Martin Diehl ea2ba1573c polishing 
!incremental update, wait for commit of damask_spectral.f90 before checking out
 2011-10-18 09:22:33 +00:00
Martin Diehl 7604a8aeb4 corrected calculation of NaN, renamed variable to 'DAMASK_NaN' 
!incremental update, wait for commit of damask_spectral.f90 before checking out
 2011-10-18 09:21:38 +00:00
Martin Diehl 6cf464b8a9 added 'spectralPictureMode' for reading in geometries with 1to1 mapping (e.g. EBSD pattern) 
polishing
!incremental update, wait for commit of damask_spectral.f90 before checking out
 2011-10-18 09:20:29 +00:00
Martin Diehl 6ed27a2a13 added 'spectralPictureMode' for reading in geometries with 1to1 mapping (e.g. EBSD pattern) 
!incremental update, wait for commit of damask_spectral.f90 before checking out
 2011-10-18 09:18:05 +00:00
Martin Diehl a8a53ee525 added two parameters to control behavior of FFTW, timelimit is not working at the moment 
remove fftw3.f as it is not needed anymore
!incremental update, wait for commit of damask_spectral.f90 before checking out
 2011-10-18 09:16:18 +00:00
Philip Eisenlohr 96223ddf39 corrected for-loop index bug. two-dim output is now optional. 2011-10-14 23:43:45 +00:00
Philip Eisenlohr 708b4d2eca seed-file header format corrected, setup script now contains minimalSurface and vicinityOffset. removed .exe from compile output 2011-10-14 22:39:58 +00:00
Martin Diehl 62db3326d6 first work on introducing a new test suit for DAMASK 2011-10-13 12:45:26 +00:00
Martin Diehl 4989535500 new version 3.3 of FFTW. Compiled with gfortran but only for multicore support (single core library is still the old version 3.2.2). Now either POSIX threads or OMP can be used by choosing the corresponding library file 
Some further polishing (besides of new description for FFTW) of the makefile
 2011-10-13 12:41:01 +00:00
Philip Eisenlohr ba0488638b alter a spectral geom file such that any voxel that sees within a given vicinity a different microstructure than itself gets offset by a given value. this allows to identify/isolate grain boundary regions... 2011-10-11 17:35:53 +00:00
Philip Eisenlohr 98c9bf9c15 generates spectral geom file for (currently) gyroid or diamond minimal surfaces. Inside and outside of a given threshold value are distinguished by microstructure 1 and 2. 2011-10-11 17:30:55 +00:00
Philip Eisenlohr ffc6442098 can now deal with arbitrarily long lines for microstructure definition. useful for 2D ASCII representation of grain morphology in the geom file. 
additional internal code reworking.
 2011-10-11 17:25:22 +00:00
Franz Roters 8edb59d50c removed some unused variables 2011-09-26 09:55:38 +00:00
Franz Roters 58917b5abe corrected error messages 
you can now switch of shear banding by seting sb_velocity to zero
stacking fault energy parameters are now read from material.config
 2011-09-26 09:55:08 +00:00
Franz Roters 2e263dee90 merged in the shear band code, it compiles but is not otherwise tested yet 2011-09-16 15:55:18 +00:00
Franz Roters 9d091bdc3f added parameters for shear band model 2011-09-14 13:35:28 +00:00
Franz Roters ee83904548 added math_spectralDecompositionSym3x3 used by shear band model 2011-09-14 13:26:00 +00:00
Martin Diehl 483b483816 dummy update because those messages got lost: 
Date: Tue, 13 Sep 2011 17:46:44 +0200
From: m.diehl@mpie.de
To: wangleyu@msu.edu, lebenso@lanl.gov, denny.tjahjanto@imdea.org,
 o.guevenc@mpie.de, n.jia@mpie.de, m.diehl@mpie.de, c.kords@mpie.de,
 c.zambaldi@mpie.de, p.eisenlohr@mpie.de, f.roters@mpie.de
Subject: update: /home/svn/repos/DAMASK to 1000
Message-ID: <4e6f7ae4.Xjnd/szYAh8QCXTo%m.diehl@mpie.de>
User-Agent: Heirloom mailx 12.2 01/07/07
MIME-Version: 1.0
Content-Type: text/plain; charset=us-ascii
Content-Transfer-Encoding: 7bit

A   processing/pre/FromEBSD/
A   processing/pre/FromEBSD/Hex2Cub.cpp
A   processing/pre/FromEBSD/SpectralMethodFromEBDS
A   processing/pre/FromEBSD/patchFromReconstructedBoundaries
D   processing/pre/patchFromReconstructedBoundaries

added two small (quick and dirty) tools to convert data from EBSD to input files for spectral method, put them together with patchFromReconstructedBoundaries into new folder.
Date: Tue, 13 Sep 2011 17:54:06 +0200
From: m.diehl@mpie.de
To: wangleyu@msu.edu, lebenso@lanl.gov, denny.tjahjanto@imdea.org,
 o.guevenc@mpie.de, n.jia@mpie.de, m.diehl@mpie.de, c.kords@mpie.de,
 c.zambaldi@mpie.de, p.eisenlohr@mpie.de, f.roters@mpie.de
Subject: update: /home/svn/repos/DAMASK to 1001
Message-ID: <4e6f7c9e.v9E4JVN2a6bg5tL8%m.diehl@mpie.de>
User-Agent: Heirloom mailx 12.2 01/07/07
MIME-Version: 1.0
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U   code/DAMASK_spectral.f90
U   code/DAMASK_spectral_interface.f90
U   code/IO.f90
U   code/crystallite.f90
U   code/homogenization_RGC.f90
U   code/lattice.f90
U   code/makefile
U   code/material.f90
U   code/mesh.f90

did a lot of polishing:
- removed unnecessary "return" before end of subroutine or function:
- changed undetermined array length (:) to (1:3)

To prevent problems with some code analysing tools:
- "3D oneliner loops" (with ";) only for "do" and "enddo" at the same time
- removed line continuation in OMP statements

made the makefile more flexible, removed heap-arrays switch
Date: Tue, 13 Sep 2011 17:57:07 +0200
From: m.diehl@mpie.de
To: wangleyu@msu.edu, lebenso@lanl.gov, denny.tjahjanto@imdea.org,
 o.guevenc@mpie.de, n.jia@mpie.de, m.diehl@mpie.de, c.kords@mpie.de,
 c.zambaldi@mpie.de, p.eisenlohr@mpie.de, f.roters@mpie.de
Subject: update: /home/svn/repos/DAMASK to 1002
Message-ID: <4e6f7d53.IEDDzo+JSzDWNSBr%m.diehl@mpie.de>
User-Agent: Heirloom mailx 12.2 01/07/07
MIME-Version: 1.0
Content-Type: text/plain; charset=us-ascii
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A   documentation/Compiling/
A   documentation/Compiling/Stack+usage.pdf
A   documentation/ParallelizationAndTuning/
A   documentation/ParallelizationAndTuning/BSC_tools_Overview.pdf
A   documentation/ParallelizationAndTuning/Intro_Perf.pdf
A   documentation/ParallelizationAndTuning/Kcachegrind.pdf
A   documentation/ParallelizationAndTuning/LRZ210703_1.pdf
A   documentation/ParallelizationAndTuning/LRZ210703_2.pdf
A   documentation/ParallelizationAndTuning/MUST_Overview.pdf
A   documentation/ParallelizationAndTuning/NPB-MZ-MPI-BT_Exercise.pdf
A   documentation/ParallelizationAndTuning/PAPI.pdf
A   documentation/ParallelizationAndTuning/PSC_Exercise_BT-MPI.pdf
A   documentation/ParallelizationAndTuning/Paraver_Exercise.pdf
A   documentation/ParallelizationAndTuning/Periscope_Overview.pdf
A   documentation/ParallelizationAndTuning/SIONlib.pdf
A   documentation/ParallelizationAndTuning/Scalasca_Examples.pdf
A   documentation/ParallelizationAndTuning/Scalasca_Exercise_BTMZ.pdf
A   documentation/ParallelizationAndTuning/Scalasca_Overview.pdf
A   documentation/ParallelizationAndTuning/Scalasca_Patterns.pdf
A   documentation/ParallelizationAndTuning/TAU.pdf
A   documentation/ParallelizationAndTuning/VIHPS-TW8.pdf
A   documentation/ParallelizationAndTuning/Vampir_Exercise.pdf
A   documentation/ParallelizationAndTuning/Vampir_Overview.pdf
A   documentation/ParallelizationAndTuning/instructions_periscope.pdf
A   documentation/ParallelizationAndTuning/manualf06.pdf

added some information from Tuning workshop in Aachen regarding tuning/parallelization

added slides with information how to prevent segmentation fauld
 2011-09-14 08:16:42 +00:00
Philip Eisenlohr c7c541f393 corrected typos and such 2011-09-13 15:57:58 +00:00
Martin Diehl d6add8b772 added some information from Tuning workshop in Aachen regarding tuning/parallelization 
added slides with information how to prevent segmentation fauld
 2011-09-13 15:57:06 +00:00