Martin Diehl
4648da1f32
small changes, tests still not running
2014-01-27 22:06:39 +00:00
Martin Diehl
b11c64d310
polishing
2014-01-27 16:24:07 +00:00
Martin Diehl
861dc76700
fixed test for compilation of core module
2014-01-27 16:07:52 +00:00
Martin Diehl
36812cd6ea
fixed some testing scripts to run with the new installation
2014-01-27 15:09:38 +00:00
Martin Diehl
02441bef0f
introduced rpath to tell executable where libraries are located
2014-01-27 14:10:49 +00:00
Martin Diehl
656e3cc6ca
some more small changes, including bug fix in configure + relative linking in Makefile for spectral solver
2014-01-27 10:12:29 +00:00
Martin Diehl
081d4da768
fixed path
2014-01-24 13:47:46 +00:00
Martin Diehl
554a6ab738
fixed typos and missing include
2014-01-24 13:17:54 +00:00
Martin Diehl
a6dac1eceb
fixed lib to use new config file
2014-01-24 13:15:01 +00:00
Martin Diehl
d66b41c686
fixed installation, will test now
2014-01-24 12:30:27 +00:00
Philip Eisenlohr
c9c6588f7c
renamed seeds file related scripts in a (hopefully) consistent manner
2014-01-23 20:48:33 +00:00
Philip Eisenlohr
3e697e006a
added (again) Intel OpenMP library to linker flag list (-liomp5). Why was that dropped..?
2014-01-22 23:57:08 +00:00
Philip Eisenlohr
380f6e1ec5
fixed syntax bugs
2014-01-22 16:03:27 +00:00
Martin Diehl
e81b798662
corrected shell extension for apply_DAMASK_modifications.sh (was py)
2014-01-18 18:00:28 +00:00
Philip Eisenlohr
fc7fd80e9c
following convention of ".py" extension for Python scripts (now also compatible with new Makefile)
2014-01-16 21:53:14 +00:00
Martin Diehl
278f854e41
introduced functionality to get output results by point from the HDF5 file
2014-01-15 22:17:32 +00:00
Martin Diehl
cf318f4392
fixed bug in lapack
2014-01-14 22:50:57 +00:00
Martin Diehl
449c66c70f
did some testing...
2014-01-14 19:32:55 +00:00
Martin Diehl
01c8c434f7
finished work on the new installation scheme (if no bugs are found ;))
2014-01-14 19:03:41 +00:00
Martin Diehl
3d69d9b927
moved DAMASK_NUM_THREADS to options, DAMASK_env.sh gets it from there
2014-01-13 10:56:54 +00:00
Martin Diehl
aab0208c65
more modifications, only configure needs modifications
2014-01-12 17:29:00 +00:00
Martin Diehl
80da1c529e
some more work on the consistent installation scheme, fixed bug in Makefile
2014-01-11 19:13:02 +00:00
Martin Diehl
4271f65d05
textfile containing options (like pathinfo, but extended and will be directly used by the Makefile)
2014-01-11 17:16:51 +00:00
Martin Diehl
2262098ed4
more work on new installation
2014-01-11 14:28:07 +00:00
Martin Diehl
e025ac5952
fixed DAMASK_env.sh to work with linux and Mac, started to reorganize installation to be consistent for all solvers
2014-01-11 12:46:30 +00:00
Christoph Kords
9a2ad45f7a
probably(?) fixed bug with Windows: comparison string should be 'Windows' not 'Windos' , I suppose
2014-01-02 15:08:09 +00:00
Martin Diehl
65de581f72
new script setup_env.py to modify DAMASK_env files, will replace setup_shellrc.py
2013-12-21 11:57:02 +00:00
Franz Roters
543639bb8f
added support for Marc/Mentat2013.1
2013-12-19 13:37:35 +00:00
Martin Diehl
bb0b35e466
made compilation_info.f90 windows compatible and added abaqus_v6_windows.env as a template for using DAMASK with windows.
...
Deleted old fftw and ACML installation instruction (can be found on damask.mpie.de)
2013-10-10 09:38:31 +00:00
Philip Eisenlohr
1593daea97
exchanged order of asking for BLASDIR and BLASTYPE. now type comes first (otherwise you may not know your options...)
2013-09-23 19:27:34 +00:00
Franz Roters
5bb9c95245
removed compiler option '-diag-enable sc3' from openMP compiler calls as it does not work together
2013-08-08 14:47:04 +00:00
Franz Roters
7415c934c5
fixed too long lines in Fortran commands with openMP
2013-08-08 07:53:51 +00:00
Franz Roters
1c933bd39a
added possibility to create damsk symlinks in /usr/local/bin, that's where also marc mentat links are placed by default
2013-08-02 13:55:06 +00:00
Franz Roters
f896b4a01e
updated Marc/Mentat integration once more to minimze interference with original instal
...
added support for Marc2013, which is now default in apply_DAMASK_modifications
2013-07-24 08:41:58 +00:00
Martin Diehl
a7b6093edc
fixed bug in include_linux64 for Marc 2012, tests should run again after updating the copy in /msc/....
...
polished two other versions of this file
unified output format for /echo/ in material.f90
2013-06-11 07:28:08 +00:00
Franz Roters
6b7a69fea6
Layout compromise between classic and new Mentat
2013-04-29 14:27:25 +00:00
Franz Roters
29a6d4f901
new Mentat integration; thre is a DAMASK menu now in jobs/run
...
our installations will be updated one by one, so watch out for the new menu!
2013-04-26 13:43:10 +00:00
Martin Diehl
8da7544978
marc doesn't need error prone setup_code any more, moved Marc includes from code/include to lib/includeMarc
...
DAMASK_marcXXXX.f90 now is not a copy any more but contains one definition and an include statement
setup_code of spectral solver is now replaced by the standard 1) configure 2) make 3) make install
2013-04-22 14:41:33 +00:00
Martin Diehl
2a6f66d504
Abaqus explicit now with correct interface, seems to work now
2013-03-21 17:24:58 +00:00
Franz Roters
48e57fc3cb
removed -save option from all compiler calls using openMP
2013-03-06 07:45:45 +00:00
Martin Diehl
80a20d5ea9
continuation of last commit
2013-02-01 13:22:40 +00:00
Martin Diehl
3ffd6499b1
change bash-only "let" to "`expr`", abaqus_v6.env now suppresses warnings about long lines (there are only comments anyway)
2013-01-28 15:30:51 +00:00
Franz Roters
41c5e43377
reduced optimization level to 01 as O2 gives the following runtime error:
...
/abaqus/6.12-2/code/bin/standard.exe: symbol lookup error: /tmp/f.roters_input_hbc_29668/libstandardU.so: undefined symbol: for_simd_random_number
2012-12-21 15:09:34 +00:00
Franz Roters
93a5a0be50
updated Marc/Mentat scripts
...
submit1 now usese O1 optimization
submit2 now usese O2 optimization
submit3 now usese O1 optimization plus openMP
added posibility to choose preferred editor in apply_DAMASK_modifications
2012-11-13 15:27:06 +00:00
Martin Diehl
339205c890
added missing quotes
2012-10-25 07:56:58 +00:00
Philip Eisenlohr
0e33725395
switched to general logic that branches locally depending on shell type.
...
now bash and csh derivatives should work.
2012-10-18 09:55:54 +00:00
Martin Diehl
71e1d4d5bb
substituted old patched FFTW with new, now unpatched, version
2012-10-05 17:27:40 +00:00
Martin Diehl
48a9104b7e
corrected fortran compile command and added comments on the compiler switches
2012-10-05 17:22:45 +00:00
Martin Diehl
73349d02f5
merged precision info into the file prec.f90 and removed prec_single.f90
...
precision information is now parsed as a makro, defined by the compiler, eg. -DFLOAT=8 for 8 byte long floats or -- in case no values is given -- for the FEM wrapper by the interface files.
Please don't forget to run setup_code.py !!!!!!!!!!!
abaqus_v6.env is adjusted to specify the standard precision (float=8, int=4) and got some extra compilation options, some deprecated warning supressors are removed
Optional Marc modification will follow that allow automatic selection of suitable precision
2012-08-28 16:08:17 +00:00
Martin Diehl
beda30302a
setup_shellrc.py now creates .bashrc if no file for login startup information is found
2012-06-22 14:18:42 +00:00
Franz Roters
5923d6b413
changed default Marc version to 2012
2012-06-20 06:40:34 +00:00
Franz Roters
15c8a6b0ac
FFTW is no longer needed for the FEM subroutine
2012-06-19 08:05:47 +00:00
Franz Roters
976564b74e
modifications for Marc/Mentat2012
2012-06-13 07:32:20 +00:00
Franz Roters
1a96a9fbad
now based on abq6111
...
now using ifort in $PATH
2012-05-16 06:57:37 +00:00
Franz Roters
93f311f2b9
now skips environment variables in comments, i.e. after '#'
2012-01-31 15:43:39 +00:00
Franz Roters
0b5a1a8925
removed some no longer used defaults
...
added library path for fftw
2012-01-17 08:37:09 +00:00
Philip Eisenlohr
37807ff6ca
added reporting of files altered by the script
2012-01-11 17:30:27 +00:00
Philip Eisenlohr
7827364908
improved subtitution/deletion handling
2012-01-11 16:38:23 +00:00
Philip Eisenlohr
c052e3d5d2
path to fftw3 lib is now set (hopefully, mandatory) with LD_LIBRARY_PATH (via setup_shellrc.py...)
2011-12-22 10:41:17 +00:00
Philip Eisenlohr
8535421429
killed obsolete "--heap-arrays" comment
2011-12-22 10:21:50 +00:00
Philip Eisenlohr
b12c6672d6
corrected LD_LIBRARY_PATH processing of LAPACK and added FFTW to it.
2011-12-21 13:13:11 +00:00
Philip Eisenlohr
8bf3cc3a3f
exchanged fftw3.3 source with patched one (now containing set_timelimit wrapper in api/f77funcs.h)
2011-12-21 12:48:20 +00:00
Franz Roters
0695bfd315
updated instructions
2011-12-21 09:35:47 +00:00
Franz Roters
fcfc8d9402
corrected small syntax error
2011-12-20 13:58:30 +00:00
Franz Roters
34d56548ad
corrected librarypath for fftw
...
removed fftw3_threads
2011-12-20 13:52:19 +00:00
Franz Roters
ee3049b761
corrected syntax errors
2011-12-20 12:53:19 +00:00
Franz Roters
485ed3742c
now aware of empty lines
2011-12-20 11:04:29 +00:00
Philip Eisenlohr
7dff3ba12c
reworked script...
2011-12-20 10:52:58 +00:00
Philip Eisenlohr
2b42896ef6
added parsing of comments (# comment here...)
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added "lib64" as possible location (sub-directory) for liblapack.a
2011-12-20 10:19:48 +00:00
Philip Eisenlohr
2b6cb3bd84
added linking option for FFTW.
...
which LAPACK installation is used can now be selected by switching on IKML, ACML, or LAPACK path (in that order of preference)
(multiuser environments now need to have system-wide installation locations for those libraries, since run_*_marc scripts are set once and for all to use them.)
2011-12-20 09:47:27 +00:00
Franz Roters
c4a4c5cdca
corrected error in apply_DAMASK_modifications
...
added support for Marc/Mentat2011 (classic)
2011-12-19 16:06:03 +00:00
Martin Diehl
031a00237f
improved makefile, no directly linking to files of acml
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corrected default pathinfo
improved test for intel compiler
2011-12-09 16:34:53 +00:00
Franz Roters
1f1046ecc5
removed option -heap arrays from all compiler calls use 'ulimit -s unlimited' on the command line instead
2011-12-01 08:54:26 +00:00
Philip Eisenlohr
4137d1f9af
fixed stupid lower case typo in pathInfo assignment
2011-11-29 17:40:11 +00:00
Franz Roters
12bf99c2f9
removed option -extend_source from compile_fortran command definition as it also seems to influence allowed line length for free format files
2011-11-28 08:19:55 +00:00
Philip Eisenlohr
db09a8b17a
removed ACML from public part and adjusted install instructions accordingly.
2011-11-14 15:21:12 +00:00
Philip Eisenlohr
413805e589
now aware of ACMLpathinfo
2011-11-14 14:59:16 +00:00
Philip Eisenlohr
eebb59d146
now environment vars are processed in known order. gracefully put own extensions to end of existing (e.g. PATH=$PATH:ourStuff)
2011-11-09 17:20:20 +00:00
Philip Eisenlohr
314caffc08
safe against partially matching envVars. pythonPath and Path for instance...
2011-11-09 16:41:44 +00:00
Claudio Zambaldi
41b8232695
setup_shellrc now adds $DAMASK_ROOT/bin to the $PATH
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in setup/setup_processing.py uncomment 3 lines to remove the links from your ~/bin
2011-11-09 16:20:52 +00:00
Claudio Zambaldi
8e34309b6e
renamed to .py so notepad++ users can have syntax highlighting
2011-11-09 13:31:59 +00:00
Philip Eisenlohr
a66c502617
made it more flexible to future envVar additions and csh implementation...
2011-11-09 10:38:57 +00:00
Franz Roters
583abf7ee6
renamed script
2011-11-07 10:53:34 +00:00
Philip Eisenlohr
313cd2edb3
ACML path example now more realistic.
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corrected dangerous overwriting of LD_LIBRARY_PATH and PYTHONPATH.
2011-11-04 15:42:52 +00:00
Philip Eisenlohr
1e35e98866
installation script to put correct LD_LIBRARY_PATH and PYTHONPATH into shell.rc
2011-11-03 17:35:47 +00:00
Philip Eisenlohr
b9647b2584
moved parts into new "lib" folder
2011-11-03 13:21:11 +00:00
Philip Eisenlohr
9565852247
now checks file "processing/MSCpath" for predefined installdir.
...
now checks validity of user-specified install version.
2011-10-20 16:13:38 +00:00
Philip Eisenlohr
64499328d1
general renaming (space in former ACML path did not work)
2011-10-20 12:25:39 +00:00
Philip Eisenlohr
c7c541f393
corrected typos and such
2011-09-13 15:57:58 +00:00
Franz Roters
60ef9d5ab0
updated installation instructions
2011-09-13 07:58:54 +00:00
Philip Eisenlohr
d4e7d6e02f
added $Id$ and some further comments
2011-08-26 07:29:55 +00:00
Franz Roters
92d7dcb3f4
added modfiles for Marc/Mentat2010.2
...
Marc/Mentat2010.2 is installed on msuws1 only right now, please test!
simply start metat2010.2 instead of mentat2010
2011-07-28 07:27:39 +00:00
Franz Roters
f24da6dffe
added comment on precompiling the subroutine into a library
2011-05-26 09:38:48 +00:00
Franz Roters
e563d539a6
added openmp flag to compiler call
2011-05-19 22:46:09 +00:00
Philip Eisenlohr
d366a53f4e
probably installation is a better place for the abq.env file
2011-05-11 17:10:45 +00:00
Franz Roters
a9774df43b
added comment on need to install AMD Core Math Library
2011-04-13 09:06:58 +00:00
Franz Roters
1b3dba4113
added -fpp switch to all compiler calls to explicitly use the precompiler
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removed -save from OpenMP compiler calls to use OpenMP auto behaviour
2011-03-28 12:18:15 +00:00
Franz Roters
8467c91dab
moved setup scripts back to subdirs where they are needed
2011-03-22 15:42:53 +00:00
Franz Roters
8bef254be7
changed name to include *.py ending to make Windows file association work again
2011-03-21 11:58:24 +00:00
Philip Eisenlohr
1f0569230b
new installation/setup dir to hold all top-level make_*-scripts
2011-03-11 09:20:37 +00:00
Franz Roters
cdeb786721
added default path of ACML
...
BLAS now also works on msuws2
2011-02-14 15:03:45 +00:00
Franz Roters
bf2082a15b
marc run scripts now link against ACML (AMD Core Math Library) to enable use of BLAS routines
...
ACML has certainly to be installed first (currently on msuws1 only) and is included for this purpose
2011-02-14 14:25:16 +00:00
Franz Roters
4216a3e066
corrected name of include file
2010-11-24 07:55:08 +00:00
Franz Roters
c07a91d19e
removed -save option from the compile statement using OpenMP
2010-11-23 16:25:58 +00:00
Philip Eisenlohr
af2437c0af
removed hardwired installation directory from submitX scripts and added corresponding flexibility into make script
2010-08-17 21:22:24 +00:00
Philip Eisenlohr
c7e5cb9806
reworked verbosity and structure of installation script
2010-07-30 19:39:54 +00:00
Philip Eisenlohr
5a0963fb81
added variable working dir (if apply_script is called from somewhere else) and made the script executable
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why using "comp_user?*" instead of "comp_user*" ?? (@Franz...)
2010-05-06 14:17:53 +00:00
Franz Roters
4954228b3a
forgot to change this file accordingly (main.msb revmoved)
2010-05-06 13:19:45 +00:00
Franz Roters
f1950cacc9
corrected apply script
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removed binary menu file, it is now created by the apply script
2010-05-06 13:17:28 +00:00
Franz Roters
383a36b226
added comment on reformating to common block files
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added modifications necessary for running the subroutine with Marc/Mentat2010
2010-05-06 08:50:54 +00:00