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DAMASK_EICMD
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new Mentat integration; thre is a DAMASK menu now in jobs/run 

our installations will be updated one by one, so watch out for the new menu!
This commit is contained in:
Franz Roters 2013-04-26 13:43:10 +00:00
parent 9fb6d8167b
commit 29a6d4f901
89 changed files with 46921 additions and 1160 deletions
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47
installation/mods_MarcMentat/2010.2/Marc_tools/comp_user_hmp Normal file
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@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTHIGHMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2010.2/Marc_tools/comp_user_l Normal file
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#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOW $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2010.2/Marc_tools/comp_user_lmp Normal file
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#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOWMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

32
installation/mods_MarcMentat/2010.2/Marc_tools/include_linux64
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@ -393,36 +393,42 @@ CCTHIGH_CASI="$CCHIGH -c99 $I8CASIDEFS"
PROFILE=
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp -WB -w90 -fno-alias -O3 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
if test "$MARCDEBUG" = "ON"
then
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp -WB -w90 -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
fi
FORTLOWT="$FORTLOW"

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installation/mods_MarcMentat/2010.2/Marc_tools/run_l_marc Normal file
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8
installation/mods_MarcMentat/2010.2/Mentat_bin/kill4 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010.2/Mentat_bin/kill5 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010.2/Mentat_bin/kill6 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010.2/Mentat_bin/kill7 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010.2/Mentat_bin/kill8 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010.2/Mentat_bin/kill9 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

156
installation/mods_MarcMentat/2010.2/Mentat_bin/submit2.org
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@ -1,156 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=/home/MPIE/f.roters/test_release/marc2010
if test $MARCDIR2
then
DIR=$MARCDIR2
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

154
installation/mods_MarcMentat/2010.2/Mentat_bin/submit3.org
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@ -1,154 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
# This is an example of remote execution of MARC using NFS
#
DIR=/home/MPIE/f.roters/test_release/marc2010
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
# Customize the following two lines:
rhost=zippy
job=/mounts/linus$PWD/$6
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
rsh $rhost marc $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2010.2/Mentat_bin/submit2 → installation/mods_MarcMentat/2010.2/Mentat_bin/submit4
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0
installation/mods_MarcMentat/2010.2/Mentat_bin/submit1 → installation/mods_MarcMentat/2010.2/Mentat_bin/submit5
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157
installation/mods_MarcMentat/2010.2/Mentat_bin/submit6 Normal file
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@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_l_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

157
installation/mods_MarcMentat/2010.2/Mentat_bin/submit7 Normal file
View File

@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_hmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2010.2/Mentat_bin/submit3 → installation/mods_MarcMentat/2010.2/Mentat_bin/submit8
View File

157
installation/mods_MarcMentat/2010.2/Mentat_bin/submit9 Normal file
View File

@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_lmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

222
installation/mods_MarcMentat/2010.2/Mentat_menus/job_run.ms
View File

@ -172,11 +172,18 @@ popmenu job_run_popmenu {
button {
position +16 =
size 32 6
text "ADVANCED JOB SUBMISSION"
size 16 6
text "ADV. JOB SUBMISSION"
popmenu job_submit_adv_pm
}
button {
position +16 =
size 16 6
text "DAMASK"
popmenu damask
}
button {
position 1 +6
size 16 6
@ -984,6 +991,217 @@ popmenu job_submit_adv_pm {
mode dialog
}
popmenu damask {
#ifdef QT_MENTAT
text "DAMASK.MPIE.DE"
#endif
group {
#ifndef QT_MENTAT
label {
position 0 0
size 50 4
text "DAMASK.MPIE.DE"
}
#endif
label {
position 2 6
size 11 6
text "Optimzation"
border_width 1
border_color black
}
label {
position +16 =
size 20 6
text "write Input"
border_width 1
border_color black
}
label {
position +18 =
size 20 6
text "do not write Input"
border_width 1
border_color black
}
label {
position -32 +6
size 9 6
text "O2"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 4 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 4 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O1"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 5 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 5 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O0"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 6 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 6 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
label {
position = +6
size 12 6
text "O2 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 7 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 7 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O1 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 8 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 8 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O0 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 9 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 9 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
popdown {
position 19 +8
size 12 8
text "CANCEL"
}
}
window {
parent mentat
origin 38 8
#ifdef DCOM
size 50 100
#else
size 50 94
#endif
background_color body
border_width 1
border_color border
buffering single
}
mode dialog
}
popmenu job_exit_msg_pm {
group {

47
installation/mods_MarcMentat/2010/Marc_tools/comp_user_hmp Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTHIGHMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2010/Marc_tools/comp_user_l Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOW $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2010/Marc_tools/comp_user_lmp Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOWMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

30
installation/mods_MarcMentat/2010/Marc_tools/include_linux64
View File

@ -364,36 +364,42 @@ CCTHIGH_CASI="$CCHIGH -c99 $I8CASIDEFS"
PROFILE=
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp -WB -w90 -fno-alias -O3 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
if test "$MARCDEBUG" = "ON"
then
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 $I8FFLAGS \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 $I8FFLAGS \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp -WB -w90 -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp -WB -w90 -fno-alias -O3 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 $I8FFLAGS \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp -WB -w90 -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2010 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
fi
FORTLOWT="$FORTLOW"

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3537
installation/mods_MarcMentat/2010/Marc_tools/run_l_marc Normal file
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3537
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8
installation/mods_MarcMentat/2010/Mentat_bin/kill4 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010/Mentat_bin/kill5 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010/Mentat_bin/kill6 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010/Mentat_bin/kill7 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010/Mentat_bin/kill8 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2010/Mentat_bin/kill9 Normal file
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@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

156
installation/mods_MarcMentat/2010/Mentat_bin/submit2.org
View File

@ -1,156 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=/home/MPIE/f.roters/test_release/marc2010
if test $MARCDIR2
then
DIR=$MARCDIR2
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

154
installation/mods_MarcMentat/2010/Mentat_bin/submit3.org
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@ -1,154 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
# This is an example of remote execution of MARC using NFS
#
DIR=/home/MPIE/f.roters/test_release/marc2010
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
# Customize the following two lines:
rhost=zippy
job=/mounts/linus$PWD/$6
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
rsh $rhost marc $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2010/Mentat_bin/submit2 → installation/mods_MarcMentat/2010/Mentat_bin/submit4
View File

0
installation/mods_MarcMentat/2010/Mentat_bin/submit1 → installation/mods_MarcMentat/2010/Mentat_bin/submit5
View File

157
installation/mods_MarcMentat/2010/Mentat_bin/submit6 Normal file
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@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_l_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

157
installation/mods_MarcMentat/2010/Mentat_bin/submit7 Normal file
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@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_hmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2010/Mentat_bin/submit3 → installation/mods_MarcMentat/2010/Mentat_bin/submit8
View File

157
installation/mods_MarcMentat/2010/Mentat_bin/submit9 Normal file
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@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_lmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

222
installation/mods_MarcMentat/2010/Mentat_menus/job_run.ms
View File

@ -172,11 +172,18 @@ popmenu job_run_popmenu {
button {
position +16 =
size 32 6
text "ADVANCED JOB SUBMISSION"
size 16 6
text "ADV. JOB SUBMISSION"
popmenu job_submit_adv_pm
}
button {
position +16 =
size 16 6
text "DAMASK"
popmenu damask
}
button {
position 1 +6
size 16 6
@ -982,6 +989,217 @@ popmenu job_submit_adv_pm {
mode dialog
}
popmenu damask {
#ifdef QT_MENTAT
text "DAMASK.MPIE.DE"
#endif
group {
#ifndef QT_MENTAT
label {
position 0 0
size 50 4
text "DAMASK.MPIE.DE"
}
#endif
label {
position 2 6
size 11 6
text "Optimzation"
border_width 1
border_color black
}
label {
position +16 =
size 20 6
text "write Input"
border_width 1
border_color black
}
label {
position +18 =
size 20 6
text "do not write Input"
border_width 1
border_color black
}
label {
position -32 +6
size 9 6
text "O2"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 4 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 4 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O1"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 5 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 5 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O0"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 6 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 6 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
label {
position = +6
size 12 6
text "O2 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 7 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 7 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O1 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 8 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 8 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O0 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 9 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 9 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
popdown {
position 19 +8
size 12 8
text "CANCEL"
}
}
window {
parent mentat
origin 38 8
#ifdef DCOM
size 50 100
#else
size 50 94
#endif
background_color body
border_width 1
border_color border
buffering single
}
mode dialog
}
popmenu job_exit_msg_pm {
group {

47
installation/mods_MarcMentat/2011/Marc_tools/comp_user_hmp Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTHIGHMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2011/Marc_tools/comp_user_l Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOW $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2011/Marc_tools/comp_user_lmp Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOWMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

30
installation/mods_MarcMentat/2011/Marc_tools/include_linux64
View File

@ -389,36 +389,42 @@ CCTHIGH_CASI="$CCHIGH -c99 $I8CASIDEFS"
PROFILE=
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp1 -WB -fno-alias -O3 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
if test "$MARCDEBUG" = "ON"
then
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DMarc4DAMASK=2011 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DMarc4DAMASK=2011 -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DMarc4DAMASK=2011 -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp1 -WB -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/bcssolver/common -I$MARC_SOURCE/mumpssolver/include $I8FFLAGS -DLinux -DMarc4DAMASK=2011 -DLINUX -DLinux_intel $FDEFINES $DDM"
fi
FORTLOWT="$FORTLOW"

3624
installation/mods_MarcMentat/2011/Marc_tools/run_hmp_marc Normal file
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File diff suppressed because it is too large Load Diff

3624
installation/mods_MarcMentat/2011/Marc_tools/run_l_marc Normal file
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File diff suppressed because it is too large Load Diff

3624
installation/mods_MarcMentat/2011/Marc_tools/run_lmp_marc Normal file
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8
installation/mods_MarcMentat/2011/Mentat_bin/kill4 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2011/Mentat_bin/kill5 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2011/Mentat_bin/kill6 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2011/Mentat_bin/kill7 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2011/Mentat_bin/kill8 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2011/Mentat_bin/kill9 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

156
installation/mods_MarcMentat/2011/Mentat_bin/submit2.org
View File

@ -1,156 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=/home/f.roters/msc/marc2011
if test $MARCDIR2
then
DIR=$MARCDIR2
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

154
installation/mods_MarcMentat/2011/Mentat_bin/submit3.org
View File

@ -1,154 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
# This is an example of remote execution of MARC using NFS
#
DIR=/home/f.roters/msc/marc2011
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
# Customize the following two lines:
rhost=zippy
job=/mounts/linus$PWD/$6
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
rsh $rhost marc $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2011/Mentat_bin/submit2 → installation/mods_MarcMentat/2011/Mentat_bin/submit4
View File

0
installation/mods_MarcMentat/2011/Mentat_bin/submit1 → installation/mods_MarcMentat/2011/Mentat_bin/submit5
View File

157
installation/mods_MarcMentat/2011/Mentat_bin/submit6 Normal file
View File

@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_l_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

157
installation/mods_MarcMentat/2011/Mentat_bin/submit7 Normal file
View File

@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_hmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2011/Mentat_bin/submit3 → installation/mods_MarcMentat/2011/Mentat_bin/submit8
View File

157
installation/mods_MarcMentat/2011/Mentat_bin/submit9 Normal file
View File

@ -0,0 +1,157 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_lmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode > /dev/null 2>&1
sleep 1
exit 0

222
installation/mods_MarcMentat/2011/Mentat_menus/job_run.ms
View File

@ -306,11 +306,18 @@ popmenu job_run_popmenu {
button {
position +16 =
size 32 6
text "ADVANCED JOB SUBMISSION"
size 16 6
text "ADV. JOB SUBMISSION"
popmenu job_submit_adv_pm
}
button {
position +16 =
size 16 6
text "DAMASK"
popmenu damask
}
button {
position 1 +6
size 16 6
@ -1061,6 +1068,217 @@ popmenu job_submit_adv_pm {
mode dialog
}
popmenu damask {
#ifdef QT_MENTAT
text "DAMASK.MPIE.DE"
#endif
group {
#ifndef QT_MENTAT
label {
position 0 0
size 50 4
text "DAMASK.MPIE.DE"
}
#endif
label {
position 2 6
size 11 6
text "Optimzation"
border_width 1
border_color black
}
label {
position +16 =
size 20 6
text "write Input"
border_width 1
border_color black
}
label {
position +18 =
size 20 6
text "do not write Input"
border_width 1
border_color black
}
label {
position -32 +6
size 9 6
text "O2"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 4 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 4 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O1"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 5 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 5 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O0"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 6 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 6 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
label {
position = +6
size 12 6
text "O2 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 7 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 7 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O1 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 8 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 8 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O0 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 9 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 9 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
popdown {
position 19 +8
size 12 8
text "CANCEL"
}
}
window {
parent mentat
origin 38 8
#ifdef DCOM
size 50 100
#else
size 50 94
#endif
background_color body
border_width 1
border_color border
buffering single
}
mode dialog
}
popmenu job_exit_msg_pm {
#ifdef QT_MENTAT

47
installation/mods_MarcMentat/2012/Marc_tools/comp_user_hmp Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTHIGHMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2012/Marc_tools/comp_user_l Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTLOW $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

47
installation/mods_MarcMentat/2012/Marc_tools/comp_user_lmp Normal file
View File

@ -0,0 +1,47 @@
#!/bin/ksh
# 1st arg: $DIR
# 2nd arg: $DIRJOB
# 3rd arg: $user
# 4th arg: $program
DIR=$1
user=$3
program=$4
usernoext=$user
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .F`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .for`
usernoext=`dirname $usernoext`/`$BASENAME $usernoext .f90`
. $DIR/tools/include
DIRJOB=$2
cd $DIRJOB
echo "Compiling and linking user subroutine $user on host `hostname`"
echo "program: $program"
$FORTRANLOWMP $user || \
{
echo "$0: compile failed for $user"
exit 1
}
/bin/rm $program 2>/dev/null
userobj=$usernoext.o
$LOAD ${program} $DIR/lib/main.o\
$DIR/lib/blkdta.o $DIR/lib/comm?.o \
${userobj-} \
$DIR/lib/srclib.a \
$MNFLIBS \
$MDUSER \
../lib/mdsrc.a \
../lib/mcvfit.a \
$STUBS \
${SOLVERLIBS} \
$TKLIBS \
$MRCLIBS \
$METISLIBS \
$SYSLIBS || \
{
echo "$0: link failed for $usernoext.o on host `hostname`"
exit 1
}
/bin/rm $userobj
/bin/rm $DIRJOB/*.mod

28
installation/mods_MarcMentat/2012/Marc_tools/include_linux64
View File

@ -383,36 +383,42 @@ CCTHIGH_CASI="$CCHIGH -c99 $I8CASIDEFS"
PROFILE=
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -O0 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -O1 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -fno-alias -O2 $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp1 -WB -fno-alias -O3 $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
if test "$MARCDEBUG" = "ON"
then
FORTLOW="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTLOWMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRAN="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTRANMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGH="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -save -fpp -zero -mp1 -WB -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTHIGHMP="$FCOMP -c -assume byterecl -safe_cray_ptr $PROFILE -fpp -zero -mp1 -WB -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-openmp -openmp_report2 \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM $SOLVERFLAGS"
FORTNA="$FCOMP -c -assume byterecl -safe_cray_ptr -save -fpp -zero -mp1 -WB -fno-alias $I8FFLAGS -I$MARC_SOURCE/common \
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
-I$MARC_SOURCE/${BCS_DIR}/common -I$MARC_SOURCE/mumpssolver/include $I8DEFINES -DMarc4DAMASK=2012 -DLinux -DLINUX -DLinux_intel $FDEFINES $DDM"
fi
FORTLOWT="$FORTLOW"

3690
installation/mods_MarcMentat/2012/Marc_tools/run_hmp_marc Normal file
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File diff suppressed because it is too large Load Diff

3690
installation/mods_MarcMentat/2012/Marc_tools/run_l_marc Normal file
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File diff suppressed because it is too large Load Diff

3690
installation/mods_MarcMentat/2012/Marc_tools/run_lmp_marc Normal file
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File diff suppressed because it is too large Load Diff

8
installation/mods_MarcMentat/2012/Mentat_bin/kill4 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2012/Mentat_bin/kill5 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2012/Mentat_bin/kill6 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2012/Mentat_bin/kill7 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2012/Mentat_bin/kill8 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

8
installation/mods_MarcMentat/2012/Mentat_bin/kill9 Normal file
View File

@ -0,0 +1,8 @@
#!/bin/sh
if [ "$1" = "" ]; then
echo "usage: $0 job_name"
exit 1
fi
echo STOP > $1.cnt

161
installation/mods_MarcMentat/2012/Mentat_bin/submit3.org
View File

@ -1,161 +0,0 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
# This is an example of remote execution of MARC using NFS
#
DIR=/msc/marc2012
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
# Customize the following two lines:
rhost=zippy
job=/mounts/linus$PWD/$6
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
gpu=$3
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
if [ "$gpu" != "" -a "$gpu" != "-" ]; then
gpu="-gpu $gpu"
else
gpu=""
fi
rm -f $job.cnt
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
rsh $rhost marc $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode $gpu > /dev/null 2>&1
sleep 1
exit 0

0
installation/mods_MarcMentat/2012/Mentat_bin/submit2 → installation/mods_MarcMentat/2012/Mentat_bin/submit4
View File

0
installation/mods_MarcMentat/2012/Mentat_bin/submit1 → installation/mods_MarcMentat/2012/Mentat_bin/submit5
View File

164
installation/mods_MarcMentat/2012/Mentat_bin/submit6 Normal file
View File

@ -0,0 +1,164 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
gpu=$3
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
if [ "$gpu" != "" -a "$gpu" != "-" ]; then
gpu="-gpu $gpu"
else
gpu=""
fi
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_l_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode $gpu > /dev/null 2>&1
sleep 1
exit 0

11
installation/mods_MarcMentat/2012/Mentat_bin/submit2.org → installation/mods_MarcMentat/2012/Mentat_bin/submit7
View File

@ -4,10 +4,10 @@
# Normal exit status is 0.
#
DIR=/msc/marc2012
if test $MARCDIR2
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR2
DIR=$MARCDIR1
fi
SRCEXT=.f
@ -58,7 +58,7 @@ else
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
@ -67,6 +67,7 @@ if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
@ -155,7 +156,7 @@ rm -f $job.log
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
"${DIR}/tools/run_hmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode $gpu > /dev/null 2>&1

0
installation/mods_MarcMentat/2012/Mentat_bin/submit3 → installation/mods_MarcMentat/2012/Mentat_bin/submit8
View File

164
installation/mods_MarcMentat/2012/Mentat_bin/submit9 Normal file
View File

@ -0,0 +1,164 @@
#!/bin/sh
#
# The exit status of this script is read by Mentat.
# Normal exit status is 0.
#
DIR=%INSTALLDIR%/marc%VERSION%
if test $MARCDIR1
then
DIR=$MARCDIR1
fi
SRCEXT=.f
RSTEXT=.t08
PSTEXT=.t19
PSTEXTB=.t16
VWFCEXT=.vfs
slv=$1
version=$2
ndom_fea_solver=$3
ndom_preprocessor=$4
hostfile=$5
compat=$6
job=$7
srcfile=$8
srcmeth=$9
shift 9 # cannot use $10, $11, ...
restart=$1
postfile=$2
viewfactorsfile=$3
autorst=$4
copy_datfile="-ci $5"
copy_postfile="-cr $6"
scr_dir=$7
dcoup=$8
nthread=$9
shift 9 # cannot use $10, $11, ...
nsolver=$1
mode=$2
gpu=$3
if [ "$slv" != "" -a "$slv" != "marc" ]; then
slv="-iam sfm"
else
slv=""
fi
if [ "$ndom_fea_solver" != "" -a "$ndom_fea_solver" != "1" ]; then
nprocds="-nprocds $ndom_fea_solver"
else
nprocd=""
if [ "$ndom_preprocessor" != "" -a "$ndom_preprocessor" != "1" ]; then
nprocd="-nprocd $ndom_preprocessor"
else
nprocd=""
fi
fi
if [ "$srcfile" != "" -a "$srcfile" != "-" ]; then
# srcfile=`echo $srcfile | sed "s/$SRCEXT$//"`
case "$srcmeth" in
-)
srcfile="-u $srcfile"
;;
compsave)
srcfile="-u $srcfile -save y"
;;
runsaved)
srcfile=${srcfile%.*}".marc"
srcfile="-prog $srcfile"
;;
esac
else
srcfile=""
fi
if [ "$restart" != "" -a "$restart" != "-" ]; then
restart=`echo $restart | sed "s/$RSTEXT$//"`
restart="-r $restart"
else
restart=""
fi
if [ "$postfile" != "" -a "$postfile" != "-" ]; then
postfile=`echo $postfile | sed "s/$PSTEXT$//"`
postfile=`echo $postfile | sed "s/$PSTEXTB$//"`
postfile="-pid $postfile"
else
postfile=""
fi
if [ "$viewfactorsfile" != "" -a "$viewfactorsfile" != "-" ]; then
viewfactorsfile=`echo $viewfactorsfile | sed "s/$VWFCEXT$//"`
viewfactorsfile="-vf $viewfactorsfile"
else
viewfactorsfile=""
fi
if [ "$hostfile" != "" -a "$hostfile" != "-" ]; then
hostfile="-ho $hostfile"
else
hostfile=""
fi
if [ "$compat" != "" -a "$compat" != "-" ]; then
compat="-co $compat"
else
compat=""
fi
if [ "$scr_dir" != "" -a "$scr_dir" != "-" ]; then
scr_dir="-sd $scr_dir"
else
scr_dir=""
fi
if [ "$dcoup" != "" -a "$dcoup" != "0" ]; then
dcoup="-dcoup $dcoup"
else
dcoup=""
fi
if [ "$nthread" != "" -a "$nthread" != "0" -a "$nthread" != "1" ]; then
nthread="-nthread $nthread"
else
nthread=""
fi
if [ "$nsolver" != "" -a "$nsolver" != "0" ]; then
nsolver="-nsolver $nsolver"
else
nsolver=""
fi
case "$mode" in
4) mode="-mo i4" ;;
8) mode="-mo i8" ;;
*) mode= ;;
esac
if [ "$gpu" != "" -a "$gpu" != "-" ]; then
gpu="-gpu $gpu"
else
gpu=""
fi
rm -f $job.cnt
rm -f $job.sts
rm -f $job.out
rm -f $job.log
# To prevent a mismatch with the python version used by the solver
# do *not* prepend $MENTAT_INSTALL_DIR/python/bin to environment variable PATH
# unset environment variables PYTHONHOME and PYTHONPATH
unset PYTHONHOME
unset PYTHONPATH
"${DIR}/tools/run_lmp_marc" $slv -j $job -v n -b y $nprocds $nprocd -autorst $autorst \
$srcfile $restart $postfile $viewfactorsfile $hostfile \
$compat $copy_datfile $copy_postfile $scr_dir $dcoup \
$nthread $nsolver $mode $gpu > /dev/null 2>&1
sleep 1
exit 0

222
installation/mods_MarcMentat/2012/Mentat_menus/job_run.ms
View File

@ -316,11 +316,18 @@ popmenu job_run_popmenu {
button {
position +16 =
size 32 6
text "ADVANCED JOB SUBMISSION"
size 16 6
text "ADV. JOB SUBMISSION"
popmenu job_submit_adv_pm
}
button {
position +16 =
size 16 6
text "DAMASK"
popmenu damask
}
button {
position 1 +6
size 16 6
@ -1075,6 +1082,217 @@ popmenu job_submit_adv_pm {
mode dialog
}
popmenu damask {
#ifdef QT_MENTAT
text "DAMASK.MPIE.DE"
#endif
group {
#ifndef QT_MENTAT
label {
position 0 0
size 50 4
text "DAMASK.MPIE.DE"
}
#endif
label {
position 2 6
size 11 6
text "Optimzation"
border_width 1
border_color black
}
label {
position +16 =
size 20 6
text "write Input"
border_width 1
border_color black
}
label {
position +18 =
size 20 6
text "do not write Input"
border_width 1
border_color black
}
label {
position -32 +6
size 9 6
text "O2"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 4 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 4 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O1"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 5 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 5 *monitor_job"
}
label {
position -29 +6
size 9 6
text "O0"
border_width 1
border_color black
}
popdown {
position +9 =
size 20 6
text "Submit"
command "*submit_job 6 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 6 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
label {
position = +6
size 12 6
text "O2 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 7 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 7 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O1 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 8 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 8 *monitor_job"
}
label {
position -32 +6
size 12 6
text "O0 / OpenMP"
border_width 1
border_color black
}
popdown {
position +12 =
size 20 6
text "Submit"
command "*submit_job 9 *monitor_job"
}
popdown {
position +20 =
size 20 6
text "Execute"
command "*execute_job 9 *monitor_job"
}
label {
position -32 +6
size 12 6
text ""
border_width 1
border_color black
}
popdown {
position 19 +8
size 12 8
text "CANCEL"
}
}
window {
parent mentat
origin 38 8
#ifdef DCOM
size 50 100
#else
size 50 94
#endif
background_color body
border_width 1
border_color border
buffering single
}
mode dialog
}
popmenu job_exit_msg_pm {
#ifdef QT_MENTAT

23
installation/mods_MarcMentat/apply_DAMASK_modifications
View File

@ -89,11 +89,17 @@ echo ''
echo 'copying Marc tools...'
theDIR=$INSTALLDIR/marc$VERSION/tools
for filename in 'comp_user' \
'comp_user_l' \
'comp_user_h' \
'comp_user_mp' \
'comp_user_lmp' \
'comp_user_hmp' \
'run_marc' \
'run_l_marc' \
'run_h_marc' \
'run_mp_marc' \
'run_lmp_marc' \
'run_hmp_marc' \
'include_linux64'; do
cp $WORKINGDIR/$VERSION/Marc_tools/$filename $theDIR
echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
@ -107,9 +113,18 @@ echo ''
echo 'copying Mentat scripts...'
theDIR=$INSTALLDIR/mentat$VERSION/bin
for filename in 'edit_window' \
'submit1' \
'submit2' \
'submit3'; do
'submit4' \
'submit5' \
'submit6' \
'submit7' \
'submit8' \
'submit9' \
'kill4' \
'kill5' \
'kill6' \
'kill7' \
'kill8' \
'kill9'; do
cp $WORKINGDIR/$VERSION/Mentat_bin/$filename $theDIR
echo $theDIR/$filename | xargs perl -pi -e "s:%INSTALLDIR%:${INSTALLDIR}:g"
echo $theDIR/$filename | xargs perl -pi -e "s:%VERSION%:${VERSION}:g"
@ -138,6 +153,8 @@ echo ''
echo 'setting file access rights...'
chmod 555 $INSTALLDIR/marc$VERSION/tools/run_*_marc
chmod 555 $INSTALLDIR/marc$VERSION/tools/comp_user?*
chmod 555 $INSTALLDIR/mentat$VERSION/bin/submit{4..9}
chmod 555 $INSTALLDIR/mentat$VERSION/bin/kill{4..9}
echo ''
echo 'done.'

23
installation/mods_MarcMentat/installation.txt
View File

@ -30,21 +30,34 @@ The structure of this directory should be (VERSION = 2010 or 2010.2 or 2011):
./apply_MPIE_modifications script file to apply modifications to the installation
./VERSION/Marc_tools/comp_user.org original file from installation
./VERSION/Marc_tools/comp_user modified version using -O1 optimization
./VERSION/Marc_tools/comp_user_l modified version using -O0 optimization
./VERSION/Marc_tools/comp_user_h modified version using -O2 optimization
./VERSION/Marc_tools/comp_user_mp modified version using -O1 optimization and OpenMP
./VERSION/Marc_tools/comp_user_lmp modified version using -O0 optimization and OpenMP
./VERSION/Marc_tools/comp_user_hmp modified version using -O2 optimization and OpenMP
./VERSION/Marc_tools/run_marc.org original file from installation
./VERSION/Marc_tools/run_marc modified version using -O1 optimization
./VERSION/Marc_tools/run_l_marc modified version using -O0 optimization
./VERSION/Marc_tools/run_h_marc modified version using -O2 optimization
./VERSION/Marc_tools/run_mp_marc modified version using -O1 optimization and OpenMP
./VERSION/Marc_tools/run_lmp_marc modified version using -O0 optimization and OpenMP
./VERSION/Marc_tools/run_hmp_marc modified version using -O2 optimization and OpenMP
./VERSION/Marc_tools/include_linux64.org original file from installation
./VERSION/Marc_tools/include_linux64 modified version
./VERSION/Mentat_bin/edit_window.org original file from installation
./VERSION/Mentat_bin/edit_window modified version
./VERSION/Mentat_bin/submit1.org original file from installation
./VERSION/Mentat_bin/submit1 modified version of original calling run_h_marc
./VERSION/Mentat_bin/submit2.org original file from installation
./VERSION/Mentat_bin/submit2 modified version of original calling run_marc
./VERSION/Mentat_bin/submit3.org original file from installation
./VERSION/Mentat_bin/submit3 modified version of original calling run_mp_marc
./VERSION/Mentat_bin/submit4 modified version of original calling run_h_marc
./VERSION/Mentat_bin/submit5 modified version of original calling run_marc
./VERSION/Mentat_bin/submit6 modified version of original calling run_l_marc
./VERSION/Mentat_bin/submit7 modified version of original calling run_hmp_marc
./VERSION/Mentat_bin/submit8 modified version of original calling run_mp_marc
./VERSION/Mentat_bin/submit9 modified version of original calling run_lmp_marc
./VERSION/Mentat_bin/kill4 kill file for submit4, identical to original kill1
./VERSION/Mentat_bin/kill5 kill file for submit5, identical to original kill1
./VERSION/Mentat_bin/kill6 kill file for submit6, identical to original kill1
./VERSION/Mentat_bin/kill7 kill file for submit7, identical to original kill1
./VERSION/Mentat_bin/kill8 kill file for submit8, identical to original kill1
./VERSION/Mentat_bin/kill9 kill file for submit9, identical to original kill1
./VERSION/Mentat_menus/job_run.ms.org original file from installation
./VERSION/Mentat_menus/job_run.ms modified version