Martin Diehl
21431295fb
documenting
2019-12-08 20:20:13 +01:00
Martin Diehl
4e2e7d02f6
more sensible interface
2019-12-08 18:54:41 +01:00
Martin Diehl
7dc128ad12
polishing
2019-12-08 18:33:43 +01:00
Martin Diehl
828e82605e
ensure that data is correctly ordered
2019-12-08 18:13:45 +01:00
Martin Diehl
8d0c4310cf
improvements to grid generation
...
- handling of origin
- inverse functions: calculate grid,size,origin from regular coordinates
(cell or node). should replace corresponding functionality in util
2019-12-08 18:12:22 +01:00
Martin Diehl
9dc726ff53
polishing
2019-12-08 09:17:57 +01:00
Martin Diehl
ba69f5a631
polishing
2019-12-07 22:33:31 +01:00
Sharan Roongta
96710a238d
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into incs-no-leading-zero
2019-12-06 15:25:21 +01:00
Martin Diehl
4ddfd82304
better names
2019-12-05 18:32:21 +01:00
Martin Diehl
b1ff178109
Merge branch 'new-ASCII' into grid-filters
2019-12-05 18:06:56 +01:00
Philip Eisenlohr
2648a67dcd
fixed sort_by to respect updated index (upon subsequent adding of new data)
2019-12-05 12:02:10 -05:00
Philip Eisenlohr
3caf2c1296
condensing code
2019-12-05 09:05:50 -05:00
Martin Diehl
e7358746dc
taking care of prospector complaints
...
variables in 'eval' are hidden
2019-12-05 10:54:35 +01:00
Martin Diehl
274aaa7359
Merge branch 'new-ASCII' into grid-filters
2019-12-05 10:50:56 +01:00
Martin Diehl
1018b89296
nice to have..
2019-12-05 10:48:42 +01:00
Martin Diehl
f885748a58
variable was never used
2019-12-05 08:43:14 +01:00
Martin Diehl
1bf4946e67
invalid escape sequence
2019-12-05 08:37:39 +01:00
Martin Diehl
469d638afb
making table class feature complete
2019-12-05 06:57:09 +01:00
Martin Diehl
ee8e3386f4
shorter but still descriptive names
2019-12-05 06:16:29 +01:00
Martin Diehl
e7a67262f8
clear enough
2019-12-05 06:00:49 +01:00
Martin Diehl
2172e92e7e
test exotic input files
2019-12-05 05:57:47 +01:00
Martin Diehl
5fdf112f78
allow strings as data in ASCII file
2019-12-05 05:45:27 +01:00
Martin Diehl
1c83572589
more descriptive names
2019-12-05 05:11:58 +01:00
Martin Diehl
381c95bd1e
WIP: regrid functionality
2019-12-04 10:41:02 +01:00
Martin Diehl
07e9778798
one more test
2019-12-04 10:20:57 +01:00
Martin Diehl
bc41bbbec5
test coordinates-related functions
2019-12-04 09:23:08 +01:00
Martin Diehl
999321e588
Merge branch 'new-ASCII' into grid-filters
2019-12-04 07:45:01 +01:00
Martin Diehl
285075bb6b
ordered alphabetically
2019-12-04 06:15:32 +01:00
Martin Diehl
6902d3dd0a
repeated test
...
better sort alphabetically
2019-12-04 06:04:06 +01:00
Martin Diehl
6c31e22855
testing new style DADF5 file
2019-12-04 05:59:52 +01:00
Martin Diehl
32ebcea207
more tests
2019-12-04 05:49:43 +01:00
Martin Diehl
fecd4632b4
correct reporting of time
2019-12-04 05:49:17 +01:00
Martin Diehl
58a190ede8
Merge branch 'development' into incs-no-leading-zero
2019-12-04 05:19:38 +01:00
Martin Diehl
1110affec2
Merge branch 'new-ASCII' of magit1.mpie.de:/damask/DAMASK into new-ASCII
2019-12-04 05:10:01 +01:00
Martin Diehl
9ad8743396
using central functionality
2019-12-03 22:00:21 +01:00
Martin Diehl
e006e0ebec
functions for spatial coordinates on regular grids
2019-12-03 18:59:59 +01:00
Martin Diehl
3effea8e1d
also check operations that should NOT work
2019-12-03 17:03:03 +01:00
Martin Diehl
f5bbd3cf22
ensure functionality through unit testing
2019-12-03 16:39:54 +01:00
Martin Diehl
ff1778d149
Merge branch 'development' into new-ASCII
2019-12-03 15:56:49 +01:00
Martin Diehl
8f77843b0f
improved naming
...
- clearer variable names
- no '-' in attributes
- single source of truth
2019-11-30 09:01:37 +01:00
Martin Diehl
354c0123a1
backward compatibility
2019-11-30 08:40:59 +01:00
Martin Diehl
4185fcb4c3
adjust to new naming
2019-11-29 21:40:54 +01:00
Martin Diehl
dc3fc8f70c
do not clutter with leading zeros
2019-11-29 17:00:48 +01:00
Martin Diehl
76a1506893
small improvements
...
bugfix: writing correct labels (now consistent with readin)
error handling for inconsistent initialization
2019-11-28 20:18:54 +01:00
Martin Diehl
f2e722ed2e
polishing
2019-11-28 18:22:34 +01:00
Martin Diehl
3e65d44e07
centralized facilities for differential operations
...
note the need to reverse the grid shape in data from the ASCII table. If x is fastest,
z is slowest we require x to be the rightmost index
2019-11-28 15:46:22 +01:00
Martin Diehl
80b50f460e
cleaning
...
trying to get rid of strange re-ordering related to ASCII table data
layout
2019-11-28 10:09:22 +01:00
Martin Diehl
ca92400c2f
polishing
...
columns is the term used py pandas
2019-11-28 05:58:28 +01:00
Martin Diehl
b85049cb81
use brackets for line continuation with comments
2019-11-28 05:41:53 +01:00
Martin Diehl
98d5738fe6
Merge branch 'new-ASCII' into grid-filters
2019-11-28 05:12:36 +01:00
Martin Diehl
80002e6cfd
proper capitalization
2019-11-27 13:21:41 +01:00
Martin Diehl
cee095b58e
better use centralized code
2019-11-27 12:22:28 +01:00
Martin Diehl
7d4b982c73
make information on modifications mandatory
2019-11-27 12:08:23 +01:00
Martin Diehl
76c3577378
pandas.DataFrame needs to be a 2nd order array
2019-11-27 12:03:35 +01:00
Martin Diehl
39734ef53c
alter data
...
allows to access multiple columns ('f') and individual components
('1_f')
2019-11-27 10:56:29 +01:00
Martin Diehl
96714089b1
documented and tested handling of multi-dimensional data
...
more precise regex expressions. get_array can handle individual
components
2019-11-27 09:58:58 +01:00
Martin Diehl
882a11c5f8
get labels without shape information
2019-11-27 08:43:20 +01:00
Martin Diehl
2d96136a0d
more general constructor for Table
...
reading from file is just one case (now handled by static method).
General constructor needs data and header information as dictionary.
Works only with python 3.7 where dict keeps the insertion order. Earlier
python versions/other implementations might fail.
2019-11-26 22:53:46 +01:00
Martin Diehl
5661f60552
fname seems to be the common name
2019-11-26 21:36:24 +01:00
Martin Diehl
925a4f73d6
staticmethod better suited than class method
...
a classmethod changes the class, i.e. it assigns attributes and gives
them specific values.
a staticmethod does not alter the class
https://www.geeksforgeeks.org/class-method-vs-static-method-python
2019-11-26 20:32:54 +01:00
Martin Diehl
845cfc34ec
similar logic as in geom class
...
- filename is not part of the object
- transparent handling of files, strings, and path-like objects for file
IO
2019-11-26 14:26:25 +01:00
Martin Diehl
81abc43920
Merge branch 'development' into new-ASCII
2019-11-26 10:29:05 +01:00
Martin Diehl
23f5e0fa58
filters for operations on regular grids (in fourier space)
2019-11-26 10:25:39 +01:00
Martin Diehl
af78aaf2f1
testing rescale
2019-11-25 14:01:40 +01:00
Martin Diehl
e16024ddf9
Merge branch 'PythonImprovements' into pytest
2019-11-25 14:00:24 +01:00
Martin Diehl
476569390a
enable use of path objects, strings, and opened files
2019-11-25 13:47:14 +01:00
Martin Diehl
b757f02649
avoid repetitions
2019-11-25 12:04:57 +01:00
Martin Diehl
6d25506204
test for new pack functionality
2019-11-25 09:28:59 +01:00
Martin Diehl
969fa9bbc7
Merge branch 'PythonImprovements' into pytest
2019-11-25 09:15:06 +01:00
Martin Diehl
3e8518d861
following prospector guidelines
2019-11-24 19:30:00 +01:00
Martin Diehl
c9f9f7c681
pack causes trouble with tests ..
2019-11-24 19:02:19 +01:00
Martin Diehl
b2cdabd009
getting rid of shell scripts
2019-11-24 18:25:53 +01:00
Martin Diehl
816e86ae5f
phasing out python shell scripts
2019-11-24 15:13:26 +01:00
Martin Diehl
8186be6293
compress functionality should be part of the geom class
...
automated decision is base on heuristic whether compression is memory
efficient
2019-11-24 14:27:24 +01:00
Martin Diehl
02df55b9bd
bugfix
...
casting to plain array works only (and makes sense only) for a derived
type
2019-11-24 11:18:41 +01:00
Martin Diehl
6060abb375
cleaning
2019-11-24 09:10:47 +01:00
Martin Diehl
c9b1944493
handling of derived datatypes/structs
...
currently required for orientation
2019-11-24 08:50:27 +01:00
Martin Diehl
f30cbde99e
use first constituent as default
2019-11-24 08:04:40 +01:00
Martin Diehl
928a5c2e55
better use fixtures
2019-11-24 06:29:00 +01:00
Martin Diehl
2b392241f9
Merge branch 'PythonImprovements' into pytest
2019-11-23 19:25:22 +01:00
Martin Diehl
406ae29897
adopting rename in mechanics
2019-11-23 19:22:18 +01:00
Martin Diehl
3be1caa4ef
read_dataset has at least two dimensions
2019-11-23 19:21:41 +01:00
Martin Diehl
eb80a82e05
first idea how to test pointwise operations
2019-11-23 18:58:44 +01:00
Martin Diehl
e3f8195621
no not change line endings
2019-11-23 17:08:36 +01:00
Martin Diehl
4dc4442fae
small DADF5 file for testing
2019-11-23 16:15:08 +01:00
Martin Diehl
510e4752fd
using parametrized tests for better coverage
2019-11-23 14:03:47 +01:00
Martin Diehl
2810531c97
a test with reference results
2019-11-23 13:37:03 +01:00
Martin Diehl
834cd43b66
intention not clear
...
any ideas why __transforms__ was used?
2019-11-23 08:06:26 +01:00
Martin Diehl
ea4c4b6636
Merge branch 'PythonImprovements' into pytest
2019-11-22 22:10:20 +01:00
Martin Diehl
dfb95df689
migrating shell scripts to python class
2019-11-22 21:48:41 +01:00
Martin Diehl
c00af5c402
4 space indents are common practice
2019-11-22 20:52:36 +01:00
Martin Diehl
e5e3db8286
Merge branch 'PythonImprovements' into pytest
2019-11-22 15:42:27 +01:00
Martin Diehl
fad679a9a5
need to catch IOError
2019-11-22 15:19:20 +01:00
Martin Diehl
6e0b2a4fab
following prospector rules
2019-11-22 13:16:53 +01:00
Martin Diehl
dac63f7d92
subfolders not needed
2019-11-22 12:55:56 +01:00
Martin Diehl
77e410d7d1
follow prospector rules
2019-11-22 12:17:44 +01:00
Martin Diehl
a26a5738dd
polishing
2019-11-21 21:48:54 +01:00
Martin Diehl
e0f3fe3cc0
ported from hand written test class
2019-11-21 21:01:01 +01:00
Martin Diehl
a3376a35b7
testing mechanics module with pytest
2019-11-21 20:00:28 +01:00
Martin Diehl
cf88c1f907
correct syntax for integer comparison
2019-11-21 19:49:46 +01:00