Commit Graph

195 Commits

Author SHA1 Message Date
Franz Roters cef87db699 renamed original file 2015-12-03 07:47:28 +00:00
Franz Roters b676ed0085 support for Marc 2010 was dropped a long time ago 2015-10-20 13:32:48 +00:00
Franz Roters a087eedd54 added support for Marc2014.2 (so far installed on maws14 only) 2015-10-20 13:25:59 +00:00
Martin Diehl 7d996cfa11 fixed new IO_stringPos for Abaqus 2015-09-05 16:26:55 +00:00
Martin Diehl be4068661b fortran 2008 standard implies assume realloc-lhs 2015-09-02 13:01:39 +00:00
Martin Diehl 7a3a67601f realloc lhs was not always working, fixed now and added test for new string pos function 2015-08-31 16:30:04 +00:00
Martin Diehl eb3173c6cc ugly hack for Abaqus in prec, it seems that it links against old (10.1) ifort where IEEE_arithmetic is not avaialbe.
Took the chance and cleaned the env file and used #ifdef# statement in the wrappers because in fixed format Fortran some lines of code might be interpretated as comments.
This should not happen, but it happens for Abaqus exp
2015-04-15 18:10:56 +00:00
Franz Roters 3f55518c31 corrected spelling error in comment 2015-01-15 08:42:47 +00:00
Franz Roters a7a6ee6cff removed non OpenMP calls from DAMASK run menu as 2013.1 enforces use of OpenMP 2014-10-30 07:33:24 +00:00
Franz Roters 63b00e4fd2 use MSC_ROOT as default installation dir but allow to modify it
make Marc2014 the default version
2014-10-22 07:45:52 +00:00
Franz Roters 6cf9907cc9 added support for Marc2014 2014-10-22 07:43:06 +00:00
Pratheek Shanthraj 9b4c1fc43d added DAMASK_FEM.exe to bin_link list 2014-09-10 08:09:35 +00:00
Martin Diehl d426be49d0 fixed linker error for some ifort/f2py combinations 2014-05-21 10:07:10 +00:00
Martin Diehl 89c896678b added printing of cli arguments to seeds_fromRandom, fixed regression in compile_CoreModule and DAMASK_spectral_doxygen 2014-05-15 09:58:31 +00:00
Martin Diehl 142a72335e small changes on the deploy me / documentation scripts 2014-05-14 10:07:10 +00:00
Martin Diehl 6df66c6349 updated Marc run_damask scripts, linking against BLAS is done by Marc anyway, removed. renamed extension of original files from org to more explicit original 2014-05-07 14:29:53 +00:00
Martin Diehl 5dedad1392 fixed typo in last commit 2014-04-30 05:05:41 +00:00
Martin Diehl 6bce04df48 changed linker command slightly to ensure dynamic linking and link now agains non-parallel (but threadsafe) versions of LAPACK
(compile_CoreModule.py, Makefile, abaqus_v6.env, mod_MarcMentat)

openmp is not working for Abaqus exp, probably because the ifort 14 is not supported.
Test is now using a version without openmp
2014-04-29 16:43:59 +00:00
Martin Diehl 2346a0841e improved symbolic linking and replace deprecated print syntax 2014-04-29 14:43:04 +00:00
Philip Eisenlohr 3f5d92b9a4 polishing and shortening 2014-04-10 19:25:23 +00:00
Martin Diehl 6550729b49 now symlinking only to know extensions (cause trouble for temp files like *.py~ and the like) 2014-04-09 10:40:10 +00:00
Martin Diehl 342ca0be47 tested new scripts to update shebang, all files got same shebang (and for python files encoding) 2014-04-01 18:41:14 +00:00
Martin Diehl 188002f16e more LF, Id, and executable status changes 2014-04-01 16:58:54 +00:00
Martin Diehl 5c3e2f49d7 simplified symlinking, using python list dir method, no need to update this script anymore 2014-03-26 13:11:12 +00:00
Philip Eisenlohr 943349fdbb bunch of new scripts:
gwyddion_filter tries to smoothen out Gwyddion data sets.
vtk_fromGwyddion produces vtk mesh from Gwyddion data set.
geom_addPrimitive allows to add box, cylinder, or ellipsoidal blobs to geom file.
2014-03-04 03:34:34 +00:00
Martin Diehl f146359c04 added --prefix option to configure script to specify symlink location 2014-02-28 07:47:11 +00:00
Martin Diehl 7245e38327 like for IMKL, we probably should link ACML also against the omp version 2014-02-14 20:14:44 +00:00
Franz Roters 8ec38e8476 corrected linker options for blas 2014-02-14 15:59:25 +00:00
Martin Diehl 368de2f565 small fix on installation with imkl, need to try it out 2014-02-11 17:05:20 +00:00
Martin Diehl 25ee49ea78 fixed Abaqus test to run with new installation scheme 2014-02-05 06:38:31 +00:00
Martin Diehl 986591682c remove equals sign in rpath definition to work with mac, changed linker options in compile_CoreModule to work with linux again, please let me know if mac doesn't work anymore (it should) 2014-01-30 13:07:44 +00:00
Tias Maiti eeca9ed349 solved error: Undefined symbols for architecture x86_64: "_PyArg_ParseTupleAndKeywords" by adding arguments to LDFLAGS 2014-01-29 20:06:57 +00:00
Tias Maiti 34663daa99 rpath=argument syntax unfortunately not working on OS X, hence changed back to rpath,argument 2014-01-29 19:52:31 +00:00
Martin Diehl f82e5ec26e some small changes on the installation scripts, IMKL now works with gfortran, more verbosity and more sanity checks 2014-01-29 12:20:56 +00:00
Martin Diehl ee99216edc polishing compile_CoreModule, bug fix for Makefile 2014-01-28 07:34:13 +00:00
Martin Diehl 4648da1f32 small changes, tests still not running 2014-01-27 22:06:39 +00:00
Martin Diehl b11c64d310 polishing 2014-01-27 16:24:07 +00:00
Martin Diehl 861dc76700 fixed test for compilation of core module 2014-01-27 16:07:52 +00:00
Martin Diehl 36812cd6ea fixed some testing scripts to run with the new installation 2014-01-27 15:09:38 +00:00
Martin Diehl 02441bef0f introduced rpath to tell executable where libraries are located 2014-01-27 14:10:49 +00:00
Martin Diehl 656e3cc6ca some more small changes, including bug fix in configure + relative linking in Makefile for spectral solver 2014-01-27 10:12:29 +00:00
Martin Diehl 081d4da768 fixed path 2014-01-24 13:47:46 +00:00
Martin Diehl 554a6ab738 fixed typos and missing include 2014-01-24 13:17:54 +00:00
Martin Diehl a6dac1eceb fixed lib to use new config file 2014-01-24 13:15:01 +00:00
Martin Diehl d66b41c686 fixed installation, will test now 2014-01-24 12:30:27 +00:00
Philip Eisenlohr c9c6588f7c renamed seeds file related scripts in a (hopefully) consistent manner 2014-01-23 20:48:33 +00:00
Philip Eisenlohr 3e697e006a added (again) Intel OpenMP library to linker flag list (-liomp5). Why was that dropped..? 2014-01-22 23:57:08 +00:00
Philip Eisenlohr 380f6e1ec5 fixed syntax bugs 2014-01-22 16:03:27 +00:00
Martin Diehl e81b798662 corrected shell extension for apply_DAMASK_modifications.sh (was py) 2014-01-18 18:00:28 +00:00
Philip Eisenlohr fc7fd80e9c following convention of ".py" extension for Python scripts (now also compatible with new Makefile) 2014-01-16 21:53:14 +00:00
Martin Diehl 278f854e41 introduced functionality to get output results by point from the HDF5 file 2014-01-15 22:17:32 +00:00
Martin Diehl cf318f4392 fixed bug in lapack 2014-01-14 22:50:57 +00:00
Martin Diehl 449c66c70f did some testing... 2014-01-14 19:32:55 +00:00
Martin Diehl 01c8c434f7 finished work on the new installation scheme (if no bugs are found ;)) 2014-01-14 19:03:41 +00:00
Martin Diehl 3d69d9b927 moved DAMASK_NUM_THREADS to options, DAMASK_env.sh gets it from there 2014-01-13 10:56:54 +00:00
Martin Diehl aab0208c65 more modifications, only configure needs modifications 2014-01-12 17:29:00 +00:00
Martin Diehl 80da1c529e some more work on the consistent installation scheme, fixed bug in Makefile 2014-01-11 19:13:02 +00:00
Martin Diehl 4271f65d05 textfile containing options (like pathinfo, but extended and will be directly used by the Makefile) 2014-01-11 17:16:51 +00:00
Martin Diehl 2262098ed4 more work on new installation 2014-01-11 14:28:07 +00:00
Martin Diehl e025ac5952 fixed DAMASK_env.sh to work with linux and Mac, started to reorganize installation to be consistent for all solvers 2014-01-11 12:46:30 +00:00
Christoph Kords 9a2ad45f7a probably(?) fixed bug with Windows: comparison string should be 'Windows' not 'Windos' , I suppose 2014-01-02 15:08:09 +00:00
Martin Diehl 65de581f72 new script setup_env.py to modify DAMASK_env files, will replace setup_shellrc.py 2013-12-21 11:57:02 +00:00
Franz Roters 543639bb8f added support for Marc/Mentat2013.1 2013-12-19 13:37:35 +00:00
Martin Diehl bb0b35e466 made compilation_info.f90 windows compatible and added abaqus_v6_windows.env as a template for using DAMASK with windows.
Deleted old fftw and ACML installation instruction (can be found on damask.mpie.de)
2013-10-10 09:38:31 +00:00
Philip Eisenlohr 1593daea97 exchanged order of asking for BLASDIR and BLASTYPE. now type comes first (otherwise you may not know your options...) 2013-09-23 19:27:34 +00:00
Franz Roters 5bb9c95245 removed compiler option '-diag-enable sc3' from openMP compiler calls as it does not work together 2013-08-08 14:47:04 +00:00
Franz Roters 7415c934c5 fixed too long lines in Fortran commands with openMP 2013-08-08 07:53:51 +00:00
Franz Roters 1c933bd39a added possibility to create damsk symlinks in /usr/local/bin, that's where also marc mentat links are placed by default 2013-08-02 13:55:06 +00:00
Franz Roters f896b4a01e updated Marc/Mentat integration once more to minimze interference with original instal
added support for Marc2013, which is now default in apply_DAMASK_modifications
2013-07-24 08:41:58 +00:00
Martin Diehl a7b6093edc fixed bug in include_linux64 for Marc 2012, tests should run again after updating the copy in /msc/....
polished two other versions of this file
unified output format for /echo/ in material.f90
2013-06-11 07:28:08 +00:00
Franz Roters 6b7a69fea6 Layout compromise between classic and new Mentat 2013-04-29 14:27:25 +00:00
Franz Roters 29a6d4f901 new Mentat integration; thre is a DAMASK menu now in jobs/run
our installations will be updated one by one, so watch out for the new menu!
2013-04-26 13:43:10 +00:00
Martin Diehl 8da7544978 marc doesn't need error prone setup_code any more, moved Marc includes from code/include to lib/includeMarc
DAMASK_marcXXXX.f90 now is not a copy any more but contains one definition and an include statement

setup_code of spectral solver is now replaced by the standard 1) configure 2) make 3) make install
2013-04-22 14:41:33 +00:00
Martin Diehl 2a6f66d504 Abaqus explicit now with correct interface, seems to work now 2013-03-21 17:24:58 +00:00
Franz Roters 48e57fc3cb removed -save option from all compiler calls using openMP 2013-03-06 07:45:45 +00:00
Martin Diehl 80a20d5ea9 continuation of last commit 2013-02-01 13:22:40 +00:00
Martin Diehl 3ffd6499b1 change bash-only "let" to "`expr`", abaqus_v6.env now suppresses warnings about long lines (there are only comments anyway) 2013-01-28 15:30:51 +00:00
Franz Roters 41c5e43377 reduced optimization level to 01 as O2 gives the following runtime error:
/abaqus/6.12-2/code/bin/standard.exe: symbol lookup error: /tmp/f.roters_input_hbc_29668/libstandardU.so: undefined symbol: for_simd_random_number
2012-12-21 15:09:34 +00:00
Franz Roters 93a5a0be50 updated Marc/Mentat scripts
submit1 now usese O1 optimization
submit2 now usese O2 optimization
submit3 now usese O1 optimization plus openMP

added posibility to choose preferred editor in apply_DAMASK_modifications
2012-11-13 15:27:06 +00:00
Martin Diehl 339205c890 added missing quotes 2012-10-25 07:56:58 +00:00
Philip Eisenlohr 0e33725395 switched to general logic that branches locally depending on shell type.
now bash and csh derivatives should work.
2012-10-18 09:55:54 +00:00
Martin Diehl 71e1d4d5bb substituted old patched FFTW with new, now unpatched, version 2012-10-05 17:27:40 +00:00
Martin Diehl 48a9104b7e corrected fortran compile command and added comments on the compiler switches 2012-10-05 17:22:45 +00:00
Martin Diehl 73349d02f5 merged precision info into the file prec.f90 and removed prec_single.f90
precision information is now parsed as a makro, defined by the compiler, eg. -DFLOAT=8 for 8 byte long floats or -- in case no values is given -- for the FEM wrapper by the interface files.

Please don't forget to run setup_code.py  !!!!!!!!!!!

abaqus_v6.env is adjusted to specify the standard precision (float=8, int=4) and got some extra compilation options, some deprecated warning supressors are removed

Optional Marc modification will follow that allow automatic selection of suitable precision
2012-08-28 16:08:17 +00:00
Martin Diehl beda30302a setup_shellrc.py now creates .bashrc if no file for login startup information is found 2012-06-22 14:18:42 +00:00
Franz Roters 5923d6b413 changed default Marc version to 2012 2012-06-20 06:40:34 +00:00
Franz Roters 15c8a6b0ac FFTW is no longer needed for the FEM subroutine 2012-06-19 08:05:47 +00:00
Franz Roters 976564b74e modifications for Marc/Mentat2012 2012-06-13 07:32:20 +00:00
Franz Roters 1a96a9fbad now based on abq6111
now using ifort in $PATH
2012-05-16 06:57:37 +00:00
Franz Roters 93f311f2b9 now skips environment variables in comments, i.e. after '#' 2012-01-31 15:43:39 +00:00
Franz Roters 0b5a1a8925 removed some no longer used defaults
added library path for fftw
2012-01-17 08:37:09 +00:00
Philip Eisenlohr 37807ff6ca added reporting of files altered by the script 2012-01-11 17:30:27 +00:00
Philip Eisenlohr 7827364908 improved subtitution/deletion handling 2012-01-11 16:38:23 +00:00
Philip Eisenlohr c052e3d5d2 path to fftw3 lib is now set (hopefully, mandatory) with LD_LIBRARY_PATH (via setup_shellrc.py...) 2011-12-22 10:41:17 +00:00
Philip Eisenlohr 8535421429 killed obsolete "--heap-arrays" comment 2011-12-22 10:21:50 +00:00
Philip Eisenlohr b12c6672d6 corrected LD_LIBRARY_PATH processing of LAPACK and added FFTW to it. 2011-12-21 13:13:11 +00:00
Philip Eisenlohr 8bf3cc3a3f exchanged fftw3.3 source with patched one (now containing set_timelimit wrapper in api/f77funcs.h) 2011-12-21 12:48:20 +00:00
Franz Roters 0695bfd315 updated instructions 2011-12-21 09:35:47 +00:00
Franz Roters fcfc8d9402 corrected small syntax error 2011-12-20 13:58:30 +00:00
Franz Roters 34d56548ad corrected librarypath for fftw
removed fftw3_threads
2011-12-20 13:52:19 +00:00