Martin Diehl
|
a21e8cd863
|
usind explicitly python2 to run in environments with python 3 as default
|
2016-05-11 11:01:39 +02:00 |
Philip Eisenlohr
|
5089d86b3d
|
sorting labels are now optional. uses existing labels (from left to right) for sorting if none specified.
|
2016-04-28 20:28:45 -04:00 |
Philip Eisenlohr
|
d3a7ceff15
|
fixed serious bug regarding wrong reshaping order (was 'C' now 'F') of 3dim to 1dim and back.
|
2016-04-28 13:25:46 -04:00 |
Philip Eisenlohr
|
426658eb36
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-04-27 09:28:51 -04:00 |
Philip Eisenlohr
|
b3e9877058
|
changed from "coords" to "pos"
remind user about (creating a new) nodal output file
|
2016-04-27 09:28:43 -04:00 |
Martin Diehl
|
d497503411
|
renamed options.coords/options.coordinates consistently to options.pos
|
2016-04-26 22:49:58 +02:00 |
Philip Eisenlohr
|
0f0ca8cd71
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-04-25 10:24:30 -05:00 |
Philip Eisenlohr
|
36f41341ec
|
Merge branch 'SimplifiedvtkRectilinear' into development
|
2016-04-25 10:23:50 -05:00 |
Philip Eisenlohr
|
c67fbe7653
|
distinguished between singular and plural in remark
|
2016-04-25 10:23:08 -05:00 |
zhangc43
|
7ed4ce859a
|
remove obsolete geom_frombarucentric script for microstructure reconstruction
|
2016-04-25 09:24:05 -04:00 |
Martin Diehl
|
c30c7714ad
|
hickup, probably from merge
|
2016-04-25 14:11:27 +02:00 |
Martin Diehl
|
26e5f97ff3
|
missing comma
|
2016-04-25 13:22:34 +02:00 |
Martin Diehl
|
2eb7ad7432
|
polishing
|
2016-04-25 12:59:15 +02:00 |
Martin Diehl
|
7ce208019c
|
Merge branch 'development' into miscImprovements
|
2016-04-25 12:36:02 +02:00 |
Martin Diehl
|
469ec4b00e
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
|
2016-04-25 12:33:06 +02:00 |
Martin Diehl
|
d6002bdb10
|
removed remaining argument line
|
2016-04-25 09:08:24 +02:00 |
Martin Diehl
|
e8afd57536
|
seems to work
|
2016-04-25 08:40:36 +02:00 |
Martin Diehl
|
26f437b507
|
fixed pointcloud issues for vtk < 7.0 (going back to old, non-XML format)
|
2016-04-25 08:28:00 +02:00 |
Martin Diehl
|
34aa11f197
|
finishing half-done renaming
|
2016-04-24 22:50:41 +02:00 |
Philip Eisenlohr
|
db7c4bba45
|
same functionality can be accomplished with existing scripts.
addEuclideanDistance + geom_fromTable
(reLabel) + specify grid and size
|
2016-04-24 14:18:29 -05:00 |
Philip Eisenlohr
|
2daa162da2
|
renamed option "position" to "seedposition". now uses util.report_geom.
|
2016-04-24 14:12:10 -05:00 |
Philip Eisenlohr
|
4b7b473d2b
|
superseded by more modern vtk_* machinery
|
2016-04-24 13:46:25 -05:00 |
Philip Eisenlohr
|
478acb96ce
|
exchanged by more modern vtk_* machinery...
|
2016-04-24 13:38:36 -05:00 |
Philip Eisenlohr
|
88548cbb87
|
accidentally copied wrong writerType. now rectilinear...
|
2016-04-24 13:22:06 -05:00 |
Philip Eisenlohr
|
8c0b0351cd
|
renamed "coordinates" option to "position". small additional polishing.
|
2016-04-24 13:12:18 -05:00 |
Philip Eisenlohr
|
10e31e489a
|
new script to add arbitrary lines to ASCIItable header
|
2016-04-24 13:10:25 -05:00 |
Philip Eisenlohr
|
b2b5f6b68c
|
removed useless check for croaking
|
2016-04-24 13:00:57 -05:00 |
Philip Eisenlohr
|
219d489df4
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-04-24 12:35:17 -05:00 |
Philip Eisenlohr
|
94933514a1
|
removed "legacy" option. STDOUT reports most modern format available (ASCII XML for point cloud, VTK for rectilinear grid).
|
2016-04-24 12:34:01 -05:00 |
Martin Diehl
|
bd23f979f4
|
also not needed anymore
|
2016-04-24 19:27:19 +02:00 |
Martin Diehl
|
33391fcf5b
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-04-24 18:58:32 +02:00 |
Martin Diehl
|
ac9a9cb6ac
|
scripts deemed useless
|
2016-04-24 18:56:13 +02:00 |
Philip Eisenlohr
|
f1b5d40bac
|
now uses util.report_geometry. some additional modernizing on the fly.
|
2016-04-24 11:24:00 -05:00 |
Philip Eisenlohr
|
c37c0a8ed9
|
added awareness for Laguerre weights
|
2016-04-24 11:22:54 -05:00 |
Philip Eisenlohr
|
f42c316aa2
|
updated help
|
2016-04-24 10:14:16 -05:00 |
Philip Eisenlohr
|
9e5a8d2391
|
modernized string formatting, updated help strings, using label_indexrange for data-slicing.
|
2016-04-24 10:09:28 -05:00 |
Philip Eisenlohr
|
648c2dd1d3
|
Only read position coordinates for grid detection. Needs data_rewind before writing of (condensed due to readArray) head.
|
2016-04-24 09:22:07 -05:00 |
Philip Eisenlohr
|
3b53d1bc82
|
polished option help messages
|
2016-04-22 14:20:36 -05:00 |
Philip Eisenlohr
|
dffa119724
|
Added explicit option to force geom input format.
Added option to output legacy format.
Possible bug in VTK presently prevents XML output to STDOUT... (Have filed issue to VTK developers.)
|
2016-04-22 14:02:07 -05:00 |
Philip Eisenlohr
|
57acaba63e
|
Missed out on putting the if..else statement as a bracketed group in a former commit. Next try of getting rid of {True: a,False: b}[choice] style...
|
2016-04-22 13:19:32 -05:00 |
Philip Eisenlohr
|
382727f2d6
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-04-22 13:13:42 -05:00 |
Philip Eisenlohr
|
a1927f84c4
|
renamed "coordinates" option to "position".
added explicit choice to write out as legacy format.
|
2016-04-22 13:09:23 -05:00 |
Martin Diehl
|
a3da663931
|
piping was broken
|
2016-04-22 17:59:50 +02:00 |
Martin Diehl
|
c57c76085f
|
missing labels
|
2016-04-21 15:41:35 +02:00 |
Martin Diehl
|
28423d4b45
|
increment information got lost
|
2016-04-21 11:31:02 +02:00 |
Martin Diehl
|
8ec9243016
|
new label name
|
2016-04-21 11:06:39 +02:00 |
Philip Eisenlohr
|
13e214fe18
|
added support for legacy VTK format
|
2016-04-18 15:08:29 -04:00 |
Philip Eisenlohr
|
0bc7f36ee5
|
added (transparent) capability to deal with geom files.
|
2016-04-18 14:49:11 -04:00 |
Philip Eisenlohr
|
24d029c7ed
|
speed up (x 5 to 10) identification of most frequent microstructure index
|
2016-04-15 18:54:09 -04:00 |
Philip Eisenlohr
|
81f6530f52
|
changed default label of coordinates to "pos"
|
2016-04-15 18:27:23 -04:00 |
Philip Eisenlohr
|
7567aae7c0
|
now deals with 1D, 2D, 3D. speed up of grid detection. "pos" as default coordinate label.
|
2016-04-15 18:25:56 -04:00 |
Philip Eisenlohr
|
8ac40ced5a
|
coordinates of nodal or cell-centered values are always labelled "pos"
|
2016-04-15 18:23:35 -04:00 |
Philip Eisenlohr
|
cbe9afb2b3
|
removed --mode option. script figures on its own.
|
2016-04-15 14:06:01 -04:00 |
Philip Eisenlohr
|
3474800db1
|
switched coordinates default from "ipinitialcoords" (ugh) to "pos"
|
2016-04-15 14:04:10 -04:00 |
Philip Eisenlohr
|
f040842ed4
|
superseded by addDisplacements
|
2016-04-15 07:41:55 -04:00 |
Philip Eisenlohr
|
01ba11448c
|
small polishing of remark output regarding <3D vectors
|
2016-04-15 07:41:24 -04:00 |
Martin Diehl
|
91753d5322
|
more style related changes
|
2016-04-15 00:35:21 +02:00 |
Martin Diehl
|
5682d8f627
|
also not needed
|
2016-04-15 00:11:03 +02:00 |
Martin Diehl
|
6aa6b418ea
|
not needed (Philip has different names)
|
2016-04-15 00:08:01 +02:00 |
Martin Diehl
|
573d10f1e1
|
Merge branch 'development' into NoCoreModule
|
2016-04-15 00:05:38 +02:00 |
Philip Eisenlohr
|
dbfd107b48
|
Add deformed configuration of given initial coordinates.
Operates on periodic three-dimensional x,y,z-ordered data sets.
Replaces 3Dvisualize..!
|
2016-04-14 17:53:48 -04:00 |
Philip Eisenlohr
|
170d377092
|
much improved algorithm to speed up grain identification.
|
2016-04-13 19:36:24 -04:00 |
Philip Eisenlohr
|
1994b5a4c1
|
removed debug messages
|
2016-04-13 19:29:04 -04:00 |
Philip Eisenlohr
|
ea0bc80af9
|
modernized to reflect rectilinearGrid processing. Now supports vector data and in-place adding.
|
2016-04-13 18:03:40 -04:00 |
Philip Eisenlohr
|
0b09ce31db
|
changed coordinate option to be consistent with rectilinearGrid.
|
2016-04-13 17:49:48 -04:00 |
Philip Eisenlohr
|
feae2164fc
|
polishing and now explicitly closing input table.
|
2016-04-13 17:48:49 -04:00 |
Philip Eisenlohr
|
6e2ca7d595
|
Removed hard requirement of 3D dataset. Fills in necessary dimensions.
|
2016-04-13 17:48:17 -04:00 |
Martin Diehl
|
70afa462b2
|
should work now with odd resolution as well
|
2016-04-11 20:25:24 +02:00 |
Martin Diehl
|
18f18aa4b9
|
detabbing
|
2016-04-11 19:55:55 +02:00 |
Martin Diehl
|
82063494fd
|
adopted to new json format of paraview
introduced "standard" colormaps for stress, strain, and orientation
file is now implicit the first argument without key (in line with other scripts)
|
2016-04-11 19:47:07 +02:00 |
Martin Diehl
|
f483c6a404
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
|
2016-04-11 16:06:00 +02:00 |
Martin Diehl
|
d278d86f9d
|
long line
|
2016-04-11 13:24:43 +02:00 |
Martin Diehl
|
b1d714581c
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into miscImprovements
|
2016-04-10 15:40:52 +02:00 |
Philip Eisenlohr
|
b0496f20ca
|
grouped command line options.
removed functionality to add random second phase.
|
2016-04-08 17:47:02 -04:00 |
Philip Eisenlohr
|
2354cd609a
|
small polishing of help.
added option to change output number format.
|
2016-04-08 17:46:06 -04:00 |
Philip Eisenlohr
|
3e6d2710a3
|
added option to report probability density
|
2016-04-05 16:18:34 -04:00 |
Philip Eisenlohr
|
e9ec497da6
|
fixed bug preventing files specified with full path to be treated properly
|
2016-04-05 16:17:55 -04:00 |
Philip Eisenlohr
|
fcddf9345e
|
added option for non-uniform weights
|
2016-03-27 17:54:49 -04:00 |
Philip Eisenlohr
|
7c72ede29d
|
now works properly for labels specified as index (instead of string)
|
2016-03-27 16:29:45 -04:00 |
Philip Eisenlohr
|
0d93a47c71
|
Generate histogram of N bins in given data range.
|
2016-03-27 13:34:19 -04:00 |
Martin Diehl
|
97314619cc
|
corrections
|
2016-03-26 19:59:05 +01:00 |
Martin Diehl
|
7423c1a06a
|
not needed anymore
|
2016-03-24 18:47:11 +01:00 |
Martin Diehl
|
04d2148e61
|
will replace geom_fromAng (in combination with geom_fromTable)
|
2016-03-24 17:55:15 +01:00 |
Martin Diehl
|
ea28bc8f06
|
restored script for calculation of nodal positions
|
2016-03-24 16:19:49 +01:00 |
Martin Diehl
|
8b89063113
|
less core module
|
2016-03-24 14:19:00 +01:00 |
Martin Diehl
|
60a3ac5b04
|
copied fortran code
|
2016-03-24 12:35:33 +01:00 |
Martin Diehl
|
022b089fa7
|
cleaned core module related stuff
|
2016-03-24 11:49:23 +01:00 |
Martin Diehl
|
4592db8dfb
|
added python based geometry reconstruction
|
2016-03-24 10:37:15 +01:00 |
Martin Diehl
|
809f03bef5
|
new printing for python3 and corrected help
|
2016-03-23 17:02:51 +01:00 |
Martin Diehl
|
466178cfc7
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-03-23 11:06:11 +01:00 |
Martin Diehl
|
900d2f7bf2
|
output follows damask.croak syntax
|
2016-03-23 11:05:36 +01:00 |
Philip Eisenlohr
|
0840a5f42e
|
modernized orientation treatment and adopted slip systems from lattice.f90
|
2016-03-22 20:52:02 -04:00 |
Martin Diehl
|
fafedd5cd6
|
Merge branch 'LargeFiles' into development
|
2016-03-22 15:45:42 +01:00 |
Philip Eisenlohr
|
a41cd3df40
|
added "strict" option to reading microstructure from geom file. will now complain if data mismatches with grid.
|
2016-03-20 16:46:35 -04:00 |
Philip Eisenlohr
|
6865987ea7
|
restored option to output microstructure indices as one-dimensional list (not clear why that got lost!)
|
2016-03-20 15:01:47 -04:00 |
Philip Eisenlohr
|
e39441f36b
|
corrected usage message to tell about string comparison in filter condition
|
2016-03-17 19:02:30 -04:00 |
Aritra Chakraborty
|
0f78f1c747
|
possibility to treat floating point numbers as microstructure indices
|
2016-03-17 18:09:22 -04:00 |
Aritra Chakraborty
|
36c703ecd3
|
shortened excessively long lines
|
2016-03-16 15:20:31 -04:00 |
Aritra Chakraborty
|
3a267dc7ff
|
FFT-based gradient calculation of scalar or vector field data (sibling of addCurl and addDivergence)
|
2016-03-16 15:02:38 -04:00 |
Aritra Chakraborty
|
ce26ad06da
|
polishing and introduction of locally derived grid in FFT subroutine
|
2016-03-16 15:01:22 -04:00 |
Philip Eisenlohr
|
6197e839c9
|
fixed missing file extension when adding in-place
|
2016-03-15 14:52:10 -04:00 |
Martin Diehl
|
f857353e16
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-03-11 12:49:47 +01:00 |
Martin Diehl
|
b0dedb8cbd
|
=addOrientation can do the same (and more)
|
2016-03-09 19:02:28 +01:00 |
Philip Eisenlohr
|
e9338200eb
|
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
|
2016-03-09 12:28:52 -05:00 |
Philip Eisenlohr
|
b933359f17
|
clarified text of error message complaining about wrong input dimension
|
2016-03-09 12:28:36 -05:00 |
Philip Eisenlohr
|
4dfd59a9e2
|
output complete microstructure and texture info instead of limiting to grainIDs used in geometry
|
2016-03-07 22:15:40 -05:00 |
Martin Diehl
|
f13ba71f6e
|
fixed typo
|
2016-03-04 17:24:13 +01:00 |
Martin Diehl
|
48233d2767
|
missing variable
|
2016-03-03 14:58:04 +01:00 |
Martin Diehl
|
a51f2a29f6
|
cleaning
|
2016-03-03 14:53:55 +01:00 |
Martin Diehl
|
76a0a93c42
|
removed unneeded variables, fixed docstrings. missing variable jc in Barlat1989 from 46c33b0
|
2016-03-03 14:52:47 +01:00 |
Martin Diehl
|
3ff3bb1a5b
|
pre processing finished
|
2016-03-03 14:44:51 +01:00 |
Martin Diehl
|
93d7643875
|
no long lines anymore and prospector is also happy
|
2016-03-03 14:44:29 +01:00 |
Martin Diehl
|
9fa49b8584
|
vtk files, mainly removed from vtk import *
|
2016-03-02 13:52:33 +01:00 |
Martin Diehl
|
f7fedc4744
|
next bunch of accepted scripts
|
2016-03-02 13:50:57 +01:00 |
Martin Diehl
|
3ed3073eff
|
more...
|
2016-03-02 11:29:07 +01:00 |
Martin Diehl
|
e89923d6d3
|
next round
|
2016-03-02 11:11:20 +01:00 |
Martin Diehl
|
5d7e138a9b
|
long line
|
2016-03-02 10:55:21 +01:00 |
Martin Diehl
|
f77de7ac6e
|
adjusting style (mainly long lines an "== None")
|
2016-03-02 10:52:24 +01:00 |
Martin Diehl
|
c1dd5febd5
|
some more scripts passed
|
2016-03-01 22:27:21 +01:00 |
Martin Diehl
|
974b8cde41
|
some more syntax improvements
|
2016-03-01 22:13:57 +01:00 |
Martin Diehl
|
043f2faeb3
|
line too long
|
2016-03-01 21:59:59 +01:00 |
Martin Diehl
|
98476ea29c
|
more improved scripts
|
2016-03-01 21:35:59 +01:00 |
Martin Diehl
|
9cfc27d295
|
line too long (132 lines max code, like Fortran, 159 including comments, Python standard)
|
2016-03-01 21:18:32 +01:00 |
Martin Diehl
|
80dc23d93d
|
following "prospector -t pep8 -t pyflakes -t dodgy -t profile-validator -t pep257"
|
2016-03-01 21:11:43 +01:00 |
Martin Diehl
|
e55d0ae3ca
|
further attemps to make it conform with best python practice
|
2016-03-01 20:44:43 +01:00 |
Martin Diehl
|
6eb170bc07
|
still struggling with prospector
|
2016-03-01 19:37:31 +01:00 |
Martin Diehl
|
3b33d320b1
|
getting pyflakes to ignore
|
2016-03-01 19:06:00 +01:00 |
Martin Diehl
|
2a50c6bf86
|
using prospector --tool=dodgy --tool=pyflakes -M to find python flaws
|
2016-03-01 18:25:14 +01:00 |
Martin Diehl
|
7c9d344601
|
python files now report their version depending on VERSION file in $DAMASK_ROOT
|
2016-01-27 17:06:00 +00:00 |
Martin Diehl
|
f693ead989
|
adding material.config to header
|
2015-12-28 16:36:26 +00:00 |
Martin Diehl
|
c710709b1a
|
example Makefile typically does not work, deleted
|
2015-12-15 14:34:03 +00:00 |
Martin Diehl
|
19ddbc9b21
|
fixed typo and simplified
|
2015-12-15 06:16:47 +00:00 |
Philip Eisenlohr
|
6de6b8b87f
|
fixed wrong variable name when using pre-existing microstructures from table.
added switch to skip effort for tolerance == 0.
|
2015-12-09 14:13:19 +00:00 |
Martin Diehl
|
d76fcb4be8
|
was giving wrong results
|
2015-12-05 21:34:39 +00:00 |
Martin Diehl
|
7eb7a4e8cd
|
changed to use routine for symmetric matrices as ascii table cannot handle complex number anyway. further advantage: eigvals and eigvectors will be odered
|
2015-12-04 22:34:19 +00:00 |
Philip Eisenlohr
|
35202494c2
|
fixed issue caused by using -r twice as option label.
|
2015-12-04 04:33:23 +00:00 |
Philip Eisenlohr
|
784c78a3b0
|
removed defunct option to output labels as column vector.
|
2015-12-04 04:31:53 +00:00 |
Philip Eisenlohr
|
937634d703
|
added group shuffling (i.e. exchanging unique values)
|
2015-12-04 01:17:45 +00:00 |
Philip Eisenlohr
|
08014a7030
|
small polishing
|
2015-12-04 01:16:49 +00:00 |
Philip Eisenlohr
|
3fb1f02382
|
forgot $Id$ and line endings…
|
2015-12-03 22:33:38 +00:00 |
Philip Eisenlohr
|
2efc602854
|
Smooth geometry by selecting most frequent microstructure index within given stencil at each location.
|
2015-12-03 22:32:28 +00:00 |
Philip Eisenlohr
|
8f5c3b9ad7
|
small polishing.
|
2015-12-02 23:13:10 +00:00 |
Philip Eisenlohr
|
55b33e5597
|
added option “inplace” to directly modify VTK file instead of creating copy_added.
|
2015-12-02 23:10:14 +00:00 |
Martin Diehl
|
f49091c952
|
addDeformedConfiguration without core module
|
2015-12-02 20:53:02 +00:00 |
Martin Diehl
|
6ecbd3ae56
|
makefile had problems with static flag, mentat spectral Box was still using table.croak
|
2015-12-02 20:02:19 +00:00 |
Martin Diehl
|
0ffcb7fdaf
|
cleaning
|
2015-12-01 16:37:20 +00:00 |
Martin Diehl
|
f61f87e6d0
|
updated reference results (visual impression much better now) for geom_fromTable and silenced verbose debug output per default since it's causing problems when piping to file
|
2015-11-30 16:22:59 +00:00 |
Philip Eisenlohr
|
cee9a345b7
|
added option to label microstructure.
updated to most recent asciitable/damask.util infrastructure.
|
2015-11-20 16:30:55 +00:00 |
Philip Eisenlohr
|
0db4a7fad0
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added debug messages.
added background message for estimated time (+ grain info).
fixed functionality—finally works as intended (lump orientations within threshold).
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2015-11-20 16:27:57 +00:00 |
Martin Diehl
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40c2a5dd6d
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differentiate name for undeformed and deformed coordinates makes sense. Still not happy with the naming though
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2015-11-20 15:58:32 +00:00 |