Philip Eisenlohr
c0f7ae2798
updated scripts that still used formerly valid object properties of quaternions
2018-12-05 09:07:29 -05:00
Philip Eisenlohr
1d7172c971
adopted more intutitive alternative of P=-1 from Rowenhorst_etal2015
2018-12-04 17:05:35 -05:00
Martin Diehl
8f26fc9358
Merge remote-tracking branch 'origin/development' into 56-parallel-hdf5
2018-12-04 22:34:29 +01:00
Martin Diehl
7c1e2e256c
os.urandom returns byte, not string in python3
2018-11-24 10:07:47 +01:00
Martin Diehl
c0ad496764
eigenvalue solver seems to depent on python version
2018-11-22 23:13:49 +01:00
Martin Diehl
76accdeaf2
all orientations are passive now
...
.conjugated() not needed anymore.
Rest is polishing
2018-11-22 18:45:01 +01:00
Philip Eisenlohr
9b82b7fadd
removed obsolete keyword "Bunge" from asEulers() method
2018-11-22 11:51:53 -05:00
Martin Diehl
ba5b623f14
Merge branch 'development' into improved-HDF5
2018-11-18 19:44:36 +01:00
Martin Diehl
fcb14f6099
was never used
2018-11-18 12:04:08 +01:00
Martin Diehl
d53b01ab56
also works for python3
2018-11-18 08:04:52 +01:00
Martin Diehl
8ee2de61ea
map returns no list any more
2018-11-17 12:12:20 +01:00
Martin Diehl
257d9d5350
needs to be list
2018-11-17 12:12:20 +01:00
Martin Diehl
44bd85a041
not working for python3, trying
2018-11-17 12:12:20 +01:00
Martin Diehl
e1a730e96b
python3 compatible integer division and argument sequence in agreement with documentation
2018-11-17 09:58:54 +01:00
Martin Diehl
015e819d4c
python3 does not allow to compare tuple/list with int
2018-11-17 09:29:05 +01:00
Martin Diehl
82861e80bc
more python3 related changes
2018-11-17 08:46:58 +01:00
Martin Diehl
558745b548
explicitly require python3
...
on older systems, python3 tpyically exists but python2 is the defaul
2018-11-17 08:12:12 +01:00
Martin Diehl
50f880afd1
more scripts working with python3
2018-11-16 19:32:17 +01:00
Martin Diehl
4ffb4a4321
fixed several typos
2018-11-16 19:28:24 +01:00
Martin Diehl
9922f5f646
adjusted to python3
...
translate is more complicated now:
https://stackoverflow.com/questions/41708770
2018-11-16 12:23:45 +01:00
Martin Diehl
26811b74d6
known to work with python3
2018-11-16 09:18:29 +01:00
Martin Diehl
a3647cc587
more files with confirmed python3 compatibility
2018-11-16 09:03:12 +01:00
Martin Diehl
f47891e292
booleans not allowed as indeces any more
2018-11-16 09:03:12 +01:00
Martin Diehl
e9e3fef8d4
more python3 compatible scripts
2018-11-15 16:40:54 +01:00
Martin Diehl
fe2c7efa27
seem to work
2018-11-15 13:56:48 +01:00
Martin Diehl
8f80152a03
use floor division of integers
...
1/2 = 0.5 in python3 (would be 0 in python2)
2018-11-15 12:28:36 +01:00
Martin Diehl
efd29e62f7
verbose should be optional
...
- causes problems on many systems (screwed up output)
- does not work with python 3 since threading class has changed
2018-11-15 12:16:55 +01:00
Philip Eisenlohr
0cbcb028aa
fixed problem with "ValueError: Mixing iteration and read methods would lose data" for string-containing tables
2018-10-21 15:39:30 -04:00
Martin Diehl
7480d1a842
fixes for Python3
2018-10-19 07:35:59 +02:00
Martin Diehl
a00d15b889
geom files are not labeled
2018-09-29 11:18:35 +02:00
Martin Diehl
8616a92309
unused module
2018-07-20 03:50:07 +02:00
Martin Diehl
24d1528e04
on the way to full python 3 compatibility
2018-07-20 03:31:46 +02:00
Martin Diehl
2632be2a76
polishing
2018-07-20 03:09:53 +02:00
Martin Diehl
784ae28dbb
now working with python 3
2018-07-20 00:39:50 +02:00
Martin Diehl
1f637a0c49
python3 compatible map requires conversion to list
2018-07-19 18:01:38 +02:00
Martin Diehl
0438b7113a
using util function where possible, ensuring python3 compatibility
2018-07-19 16:38:25 +02:00
Martin Diehl
f928bd5e5b
more python 3 compatibility
2018-07-19 16:26:30 +02:00
Martin Diehl
35e470ff4d
needed for python3
2018-07-19 16:19:05 +02:00
Martin Diehl
9821654aae
iteritems does not exist in python3 anymore
...
items also works for python2 (might be slower though)
2018-07-19 16:16:10 +02:00
Martin Diehl
d138993c1d
using util functionality to be compatible with python3
2018-07-19 16:12:36 +02:00
Martin Diehl
aadcd61824
polishing
2018-06-18 00:05:55 +02:00
Philip Eisenlohr
1b12457fe6
vicinityOffset to specific triggering IDs instead of just any other ID
2018-03-30 11:48:02 -04:00
Philip Eisenlohr
0570a49ed5
fixed broken logic of restoring and preventing immutable microstructures
2018-03-27 16:53:49 -04:00
Philip Eisenlohr
2c3eae6bf0
fixed tests and bug for very small unit cube fractions when grid is also small
2018-03-07 18:59:27 -05:00
Philip Eisenlohr
32c34457c2
direct selection of valid seed coordinates within subfraction of unit cube instead of check and repeat
2018-03-07 17:45:22 -05:00
Martin Diehl
1bbaa7cefe
reverted last commit, scipy.linalg is different from numpy.linalg
2018-02-26 23:50:44 +01:00
Martin Diehl
6046a7ae3d
there is no scipy.linalg (at least on my system)
...
numpy.linalg is automatically imported together with numpy
2018-02-26 20:22:57 +01:00
Philip Eisenlohr
b078234644
added scipy and scipy.linalg as known modules for calculations
2018-02-25 14:19:22 -05:00
Philip Eisenlohr
f5177b6d2d
[skip ci] added option for non-periodic geometries
2018-02-20 10:20:35 -05:00
Martin Diehl
2254746177
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2018-02-12 11:23:05 +01:00
Fengbo Han
9249e7db2b
Merge branch 'development' into HMS
2018-02-07 11:44:17 +01:00
Martin Diehl
ba3a4e1254
indicating vectors with 1_, ..., n_ is standard now, "euler" also (more or less)
2018-02-05 17:34:08 +01:00
Philip Eisenlohr
e304ce35da
forgot to rename function call to read "coordGridAndSize"
2018-01-30 12:58:43 -05:00
Philip Eisenlohr
355d576b4d
shortened code with utility function coordGridAndSize
2018-01-30 09:20:47 -05:00
Philip Eisenlohr
710970d728
updated option --label for addCurl/Div/Grad
2018-01-29 21:27:05 -05:00
Philip Eisenlohr
1d71a52133
further simplifcation of scripts
2018-01-29 15:10:41 -05:00
Philip Eisenlohr
b45b43c5ac
bug fix in addCurl, simplified scripts
2018-01-29 14:12:19 -05:00
Philip Eisenlohr
622d038932
einsum now compatible with numpy 1.14
2018-01-29 09:18:05 -05:00
Philip Eisenlohr
30272fc355
generalized addCurl with --data instead of --tensor and --vector
2018-01-28 18:25:50 -05:00
Philip Eisenlohr
8fb127f31c
better description of activity
2018-01-28 18:08:02 -05:00
Philip Eisenlohr
761670f218
generalized addGradient with --data instead of --scalar and --vector
2018-01-28 18:02:35 -05:00
Philip Eisenlohr
532d669d33
switched to more robust line based output
2018-01-27 17:45:53 -05:00
Brendan Vande Kieft
ceb0ff09e6
Subdivide vertex data with geometry when converting Marc input to VTK
2018-01-15 17:20:24 -05:00
brendanvk
a03bb1ec3e
Add MSC.Marc to VTK conversion support
...
marc_to_vtk.py takes Marc input file, subdivides it and creates a
vtkUnstructuredGrid .vtu file with the resulting geometry. Currently
supports hexahedron elements.
vtk_addGridData.py adds nodal/cell data to some VTK grid. It is
essentially vtk_addRectilinearGridData with support for unstructured
grid (.vtu) format, which is marc_to_vtk.py's output.
2017-12-11 12:32:38 -05:00
Philip Eisenlohr
c33655b479
fixed pyflakes issues
2017-11-28 11:14:22 -05:00
Philip Eisenlohr
0c8c4b54aa
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-11-28 11:12:05 -05:00
Philip Eisenlohr
3b96fac8bd
added script to calculate numerical derivative of ASCIItable data
2017-11-28 10:59:53 -05:00
Martin Diehl
4dfb52c792
unfinished HDF5 should not be part of the next release
2017-11-21 10:23:50 +01:00
Martin Diehl
b4f4527ad1
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-11-05 08:31:59 +01:00
Fengbo Han
2b69cb8ea9
removed unnecessary liens
2017-10-24 13:23:44 +02:00
Fengbo Han
d77789b89f
minor change
2017-10-24 12:01:10 +02:00
Fengbo Han
d599aec37f
Merge branch 'development' into HMS
2017-10-24 11:24:54 +02:00
Fengbo Han
82758bd90f
added yield criterion of facet potential
2017-10-24 11:15:34 +02:00
Franz Roters
eddc2a6acf
numpy actually not needed
2017-10-20 10:17:08 +02:00
Franz Roters
0c24f113c1
split overlong line
2017-10-20 10:14:15 +02:00
Franz Roters
26b8788c06
script to colocate 2D ang files into one §D file and optionally creat geometry and Paraview files
2017-10-20 09:36:57 +02:00
Martin Diehl
eda8c24b7d
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-10-07 17:24:59 +02:00
Philip Eisenlohr
14c1291046
added "--quiet" option to suppress online messaging
2017-10-03 14:03:50 -04:00
Tias Maiti
f46d721750
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-09-03 17:42:02 -07:00
Philip Eisenlohr
64259d9239
bug fixed in whitelist sorting, more robust against numpy parsing errors
2017-08-28 19:38:14 -04:00
Philip Eisenlohr
5b8bc65d37
exchanged string 'n/a' for 'nan' to allow smooth parsing as float value
2017-08-28 19:32:59 -04:00
Philip Eisenlohr
9e5896a6c5
large speedup (10x) for unconditional filtering by using read/writeArray
2017-08-23 20:54:02 -04:00
Philip Eisenlohr
fc4fb43d48
aborting when NO data columns found
2017-08-23 17:53:30 -04:00
Philip Eisenlohr
ff072ae3c4
fixed bug (lost orgin info)
2017-08-23 15:14:22 -04:00
Philip Eisenlohr
e82df723d1
added Rodrigues vector as possible input format
2017-08-23 14:10:56 -04:00
Philip Eisenlohr
b3ac200c17
report linking column in screen output
2017-08-23 14:10:22 -04:00
Philip Eisenlohr
9b6e092b5c
changed location where script appends itself to info trail
...
used to be sometimes at top, sometimes at bottom; now always after predecessor and above standard geom header
2017-08-23 14:09:33 -04:00
Philip Eisenlohr
f825e91bf1
script to straighten numbering in geom
2017-08-23 14:08:11 -04:00
Philip Eisenlohr
12fed7a38f
added option to use seed coordinates that are not normalized to a unit cube
2017-08-16 16:24:45 -04:00
Philip Eisenlohr
255a465e8b
sharpened error detection and reporting
2017-08-16 15:18:29 -04:00
Philip Eisenlohr
e18c2fd74c
slight layout tweak
2017-08-16 12:52:46 -04:00
Philip Eisenlohr
91c70fc823
sharpened error detection and reporting
2017-08-16 12:51:32 -04:00
Philip Eisenlohr
a2947789b5
clarified help and reporting
2017-08-15 16:12:06 -04:00
Philip Eisenlohr
4eff7cfdd8
fixed wrong name for "pos" options destination
2017-08-15 16:11:21 -04:00
Martin Diehl
95c0179945
labeling vectors and values independenty in addSpectralDecomposition
2017-08-13 02:14:34 +02:00
Philip Eisenlohr
e6cc948ddf
added vector-valued conditions and cleaned obsolete code
2017-08-11 15:19:47 -04:00
Zhuowen Zhao
b7d4b3d190
simplified internal handling of conditions and added vector capability to it
2017-08-11 11:56:27 -04:00
Tias Maiti
3860eecb7c
Merge branch 'development' of magit1.mpie.de:damask/DAMASK into development
2017-08-10 11:09:37 -04:00
Fengbo Han
9bbc0d4803
implemented fast yield surface fitting with yield stop criteria
2017-08-08 17:29:14 +02:00
Fengbo Han
36c370e668
implemented fast yield surface fitting with yield stop criteria
2017-08-08 17:25:38 +02:00