Commit Graph

13244 Commits

Author SHA1 Message Date
Martin Diehl 97ee7e6ee5 not needed anymore 2020-12-07 17:26:50 +01:00
Sharan Roongta 21faee4eaa '0' based indexing 2020-12-07 13:03:18 +01:00
Martin Diehl 429b84004d more filters
- shuffle: significanlty better compression
- Fletcher32: checksum to detect errors

computational overhead is very small
2020-12-06 19:57:00 +01:00
Martin Diehl bc4361c2ae use variable string length
for array, padding is needed to get same length
2020-12-06 13:32:20 +01:00
Martin Diehl 52e3fb50bc compress.
Datasets are chunked along first timension. Chunk size (1MB for real) is
probably not optimal
2020-12-06 11:44:52 +01:00
Martin Diehl 000de75617 write orientation as plain array, not derived type 2020-12-06 08:36:16 +01:00
Sharan Roongta f563313ce9 PETSc provides subroutine to read physical tags 2020-12-06 00:10:04 +01:00
Martin Diehl 78a246b44a avoid constant reallocation, it is slow for large vtr files 2020-12-05 12:46:48 +01:00
Martin Diehl 42eb802126 not needed anymore 2020-12-05 11:29:23 +01:00
Martin Diehl c80e1c5420 less confusing in the standard case, more helpful in the special case 2020-12-05 10:47:42 +01:00
Martin Diehl ed286ee09f Merge branch 'rename-grid-2' into misc-improvements 2020-12-05 09:50:46 +01:00
Sharan Roongta 579d2a9147 test file updated 2020-12-04 13:05:54 +01:00
Martin Diehl 171d642dbd rename: Geom -> Grid 2020-12-04 07:50:47 +01:00
Sharan Roongta 665dd3020d new gmsh version 2020-12-04 03:30:39 +01:00
Martin Diehl 0fdefa5e78 renames:
after the rename of "grid" to "cell", the name cell should not be used
for the coordinates of the cell centers. In agreement with the names
x_p/u_p for point positions/displacements, now the "point" is used to
refer to the materialpoints (i.e. cell centers)

Additionally, "_node"/"_point" are now suffixes to
"coordinates"/"displacements".

Finally, "coords" is renamed to "coordinates"
2020-12-03 23:59:37 +01:00
Martin Diehl ac0a20696c rename: grid -> cells 2020-12-03 22:16:34 +01:00
Test User 676840ae1b [skip ci] updated version information after successful test of v3.0.0-alpha-920-gccf1a849f 2020-12-03 19:23:16 +01:00
Philip Eisenlohr ccf1a849fa Merge branch 'ShowGrainBoundaries' into 'development'
Show grain boundaries

See merge request damask/DAMASK!297
2020-12-03 17:13:15 +01:00
Test User f8208afb53 [skip ci] updated version information after successful test of v3.0.0-alpha-893-g20e831fd8 2020-12-03 14:39:00 +01:00
Franz Roters 20e831fd80 Merge remote-tracking branch 'origin/fix-pruning-broken-links' into development 2020-12-03 10:57:58 +01:00
Test User 94503ba73d [skip ci] updated version information after successful test of v3.0.0-alpha-890-g97df1ab9b 2020-12-03 08:51:34 +01:00
Philip Eisenlohr 4877334986 added getitem and where functionality to Table 2020-12-02 19:25:54 -05:00
Philip Eisenlohr 97df1ab9b3 reinstated write functionality 2020-12-02 13:04:56 -05:00
Philip Eisenlohr 431b6aa8d5 [skip ci] call unlink function 2020-12-02 12:29:57 -05:00
Test User e7e8d7be21 [skip ci] updated version information after successful test of v3.0.0-alpha-888-g5726f0bce 2020-12-02 14:49:13 +01:00
Martin Diehl d3a5979d25 meaningful result 2020-12-02 14:45:47 +01:00
Martin Diehl c880052250 avoid evil eval 2020-12-02 14:37:44 +01:00
Martin Diehl aa8f30d746 Merge branch 'development' into ShowGrainBoundaries 2020-12-02 12:50:04 +01:00
Vitesh 5726f0bce9 Merge branch 'XDMF-improvements' into 'development'
Xdmf improvements

See merge request damask/DAMASK!293
2020-12-02 12:39:07 +01:00
Test User 829843284c [skip ci] updated version information after successful test of v3.0.0-alpha-884-g1c29a517a 2020-12-01 18:00:11 +01:00
Sharan Roongta 1c29a517a5 Merge branch 'lattice-structure-rename' into 'development'
Lattice structure rename

See merge request damask/DAMASK!292
2020-12-01 15:50:09 +01:00
Test User 96690c509e [skip ci] updated version information after successful test of v3.0.0-alpha-877-g3f1af182d 2020-12-01 14:06:19 +01:00
Francisco Jose Gallardo Basile 3f1af182df Merge branch 'new-test-server' into 'development'
New test server

See merge request damask/DAMASK!291
2020-12-01 11:55:42 +01:00
Martin Diehl 1c2cdbd5a1 support of all standard numpy types
+ tests
2020-11-30 12:33:21 +01:00
Martin Diehl 813ef927c4 consistent with "save_XDMF" (capitalized) 2020-11-30 09:28:46 +01:00
Martin Diehl 4d2bf37193 Merge branch 'lattice-structure-rename' into ShowGrainBoundaries 2020-11-29 20:53:58 +01:00
Martin Diehl 718511c08c now done with pytest 2020-11-29 15:05:38 +01:00
Martin Diehl 85d161f039 missing rename: bcc -> cI
also, no CamelCase in disloTungsten + a few renames of variable names
for more consistency
2020-11-29 12:57:51 +01:00
Martin Diehl 1d05edd7b3 fixes:
- need to get crystal structure as attribute in test (generic function
  was removed, because the crystal structure is in general not the same
  over the whole domain)
- consistent sorting of attributes
2020-11-29 09:06:47 +01:00
Martin Diehl f48f5cb0e8 bugfix/better readable 2020-11-29 08:58:48 +01:00
Martin Diehl c712332e87 using consistent names for Bravais lattice in Fortran and Python 2020-11-28 22:38:12 +01:00
Martin Diehl 531af1af5b need to allow failure for grid-FEM for PETSc 3.14 2020-11-28 12:17:57 +01:00
Martin Diehl b7ae2c72f5 allow to parse extra options to PETSc in case of debugging 2020-11-28 11:47:20 +01:00
Martin Diehl 80c8c9e51e fixing use for new Intel Fortran
visibility of use associated entities can now be limited
2020-11-28 07:23:55 +01:00
Martin Diehl 60f9cb704f using new names 2020-11-27 23:37:46 +01:00
Martin Diehl a8da1e5ed9 Paraview 5.9 supports datasets of arbitrary length in XDMF 2020-11-27 22:57:15 +01:00
Martin Diehl 70fca0d4c9 Merge remote-tracking branch 'origin/development' into new-test-server 2020-11-27 21:19:15 +01:00
Martin Diehl 3c1f1af009 more then one direction in file 2020-11-27 20:16:06 +01:00
Test User 10f7229aa9 [skip ci] updated version information after successful test of v3.0.0-alpha-868-gb8344973d 2020-11-26 11:59:56 +01:00
Franz Roters b8344973df Merge branch 'geometric-progression-scaling' into 'development'
replace log scaling with geometric progression scaling

See merge request damask/DAMASK!290
2020-11-26 09:51:20 +01:00