Martin Diehl
453f5a14c5
duplicated test (w/o wait for parallel out)
2020-08-25 00:53:05 +02:00
Martin Diehl
2751cdb6af
support comments also in vtr
2020-08-25 00:40:14 +02:00
Martin Diehl
9a2ac31545
explicit is better then implicit
2020-08-24 23:35:46 +02:00
Martin Diehl
0ceba2a6d3
use central functionality
2020-08-24 23:28:26 +02:00
Martin Diehl
71e08ea66a
small fixes:
...
- numpy has multiple float variants
- start renaming microstructure -> materialpoint where it does not hurt
- no need for type check if comparing against set of valid directions
(or I miss some corner cases)
2020-08-24 23:23:47 +02:00
Philip Eisenlohr
2560f014a3
Merge remote-tracking branch 'origin/increase-geom-test-coverage' into geom-out-of-place
2020-08-24 17:17:31 -04:00
Martin Diehl
55443a3ff5
reflect change of variable names in file layout version
2020-08-24 22:54:09 +02:00
Martin Diehl
279d43ccc6
include version info + date in comments (Table class)
2020-08-24 19:04:59 +02:00
Martin Diehl
9d505c8518
better readable
...
- more explicit reporting
- always relative import for DAMASK
2020-08-24 09:58:24 +02:00
Martin Diehl
b393da4955
relative imports
...
... it's all about damask.XXX
2020-08-24 07:28:10 +02:00
Martin Diehl
0d3ef29554
more logical encapsulation
...
- getting data out of VTK is a functionality of the VTK class. Need to
discuss whether the VTK class should also provide grid and size (works
only for rectilinear grid, so hiding VTK type is not possible
anymore), but the current situation requires the Geom class to rely on
'internals' of the VTK class
- header is specific to *.geom format, not to Geom objects.
2020-08-24 06:46:22 +02:00
Martin Diehl
507a165733
functionality for getting data
...
- handy for Geom class, but could be of general interest
- add/set/get comments: follows same functions as for Geom class
2020-08-24 06:40:36 +02:00
Philip Eisenlohr
3738002e4a
forgot the new reference files...
2020-08-23 22:27:53 -04:00
Philip Eisenlohr
446ac03b07
All geom methods are now out-of-place, i.e. return an updated duplicate (to allow for daisy chaining).
...
* Added comments when methods acted.
* Added diff method
* Added flip method
* Fixed add_primitive inversion bug (again...)
* Fixed cell centering bug in add_primitive
* Added missing tests
2020-08-23 19:43:46 -04:00
Martin Diehl
22da3af92e
cleaning (prospector complaint)
2020-08-24 00:44:18 +02:00
Martin Diehl
44015082a3
dead code (copy and paste error)
2020-08-24 00:34:07 +02:00
Martin Diehl
c7cbd961a1
more systematic monkeypatching
...
allows comparison of reference files (log/history does not contain
information about damask.version and datetime.datetime.now)
2020-08-24 00:31:38 +02:00
Martin Diehl
9867830d68
store history of geometry modifications
2020-08-23 23:52:48 +02:00
Martin Diehl
a1c78b778a
WIP: track history in VTK objects
2020-08-23 23:22:53 +02:00
Martin Diehl
7b50a3b364
material.config is not used anymore
2020-08-23 15:20:11 +02:00
Martin Diehl
d65371d42f
removed unused and untested functionality
...
PEP 20: Explicit is better than implicit.
2020-08-23 12:55:55 +02:00
Martin Diehl
6f79573140
more test coverage
2020-08-23 11:05:56 +02:00
Martin Diehl
07af7b2f98
geom is written to vtr exlcusively, not to general vtk
...
base tests on vtr
2020-08-23 10:50:15 +02:00
Martin Diehl
64e7582e8e
consistent interface to ndimage filters
...
Boolean 'periodic' sets mode to 'wrap' or 'nearest'
2020-08-23 10:02:22 +02:00
Martin Diehl
975db01f31
microstructure -> materialpoint
...
at least for new functionality
2020-08-23 09:38:08 +02:00
Martin Diehl
5fb2d30ee4
fast and for arbitrary type
2020-08-23 09:02:17 +02:00
Martin Diehl
b731b1e768
Geom.to_vtk improvements
...
- should be integer
- should have a test
2020-08-23 08:49:49 +02:00
Philip Eisenlohr
2b09a7d31d
fixed Geom.canvas bug, added Geom.from_vtk, added mode,selection options to Geom.clean
2020-08-22 21:36:11 -04:00
Martin Diehl
bd4fb562bc
make use of inhereted dependencies
2020-08-22 20:57:42 +02:00
Philip Eisenlohr
499ce01748
added Geom.copy() method
2020-08-22 13:57:31 -04:00
Martin Diehl
34a08bd8b8
pip package is pillow, not PIL
2020-08-22 17:04:21 +02:00
Philip Eisenlohr
752d6f773b
corrected add_primitive test
2020-08-09 23:14:32 +02:00
Martin Diehl
ff7eed4477
(unified) type hints
2020-08-08 20:56:17 +02:00
Martin Diehl
0c6ce390b5
simple IO tests
...
can be improved ...
2020-08-08 20:35:50 +02:00
Martin Diehl
6a5471d243
have microstructure with 'to' and 'of'
2020-08-08 20:24:36 +02:00
Martin Diehl
55a620b378
migrating to library
2020-08-08 20:14:30 +02:00
Martin Diehl
a0e0f28e51
migrating shell scripts to library
2020-08-08 19:42:34 +02:00
Martin Diehl
5fcff876f9
replace selectively
...
useful for vicinity_offset and add_primitive
2020-08-08 18:41:47 +02:00
Martin Diehl
56eb57d253
homogenization will be removed soon, stop reporting it
2020-08-08 18:24:17 +02:00
Karo
7824a61f2e
Merge branch 'user_defined_add_calculation' into 'development'
...
User defined add calculation
See merge request damask/DAMASK!195
2020-08-06 00:53:16 +02:00
Philip Eisenlohr
ce00371f52
fixed rounding bug and updated reference images
2020-08-05 10:44:10 -04:00
Philip Eisenlohr
e4103564a9
16bit color index; proper rounding of index values
2020-08-05 10:08:48 -04:00
Martin Diehl
0aaba487d7
required packages
2020-08-05 06:20:05 +02:00
Martin Diehl
856dc22eab
Merge branch 'imageData-as-colormap.apply' of magit1.mpie.de:/damask/DAMASK into imageData-as-colormap.apply
2020-08-04 20:38:02 +02:00
Martin Diehl
7d49606597
restored correct bound calculation
...
test different bounds options
2020-08-04 20:34:40 +02:00
Philip Eisenlohr
e73ffd6da9
fixed and condensed lo,hi range assignment
2020-08-04 20:29:27 +02:00
Martin Diehl
e07c00a592
polishing + simple test
...
autoscaling seems to be broken
2020-08-04 20:14:04 +02:00
Philip Eisenlohr
84551c9d1e
integrated former imageData functionality as "shade" method
2020-08-04 13:05:30 -04:00
Martin Diehl
ae20f5ffe6
attempt to fix parallel writing on MacOS
...
should resolve TypeError: cannot pickle
'vtkmodules.vtkIOXML.vtkXMLRectilinearGridWriter' object error
2020-08-03 18:19:38 +02:00
Martin Diehl
3f2e63977d
not needed anymore
2020-07-31 19:46:44 +02:00
Martin Diehl
72ea9a5cec
non-vectorized formulas can be implemented in a user function
2020-07-31 19:42:44 +02:00
Martin Diehl
a9f53f4822
non-vectorized formulas can be implemented in a user functionc
2020-07-31 17:04:14 +02:00
Martin Diehl
50d7842dbe
more tests
2020-07-31 16:50:01 +02:00
Martin Diehl
aadce1e554
Merge branch 'development' into user_defined_add_calculation
2020-07-31 16:15:31 +02:00
Martin Diehl
daab5a8952
polishing
2020-07-24 22:42:16 +02:00
Martin Diehl
326b82b3aa
symmetric scatter around nominal value
2020-07-24 22:41:41 +02:00
Martin Diehl
4860f9c9ce
drop support for parallel marc versions
...
can still be handled by the user, but is a niche use case
2020-07-18 09:51:53 +02:00
Martin Diehl
2bbd68d964
with_suffix strips .1 from 2019.1
2020-07-16 09:33:17 +02:00
Martin Diehl
199ec51bf8
typo
2020-07-15 21:59:43 +02:00
Martin Diehl
9225d439ab
object oriented path handling
2020-07-15 21:58:24 +02:00
Martin Diehl
fa7f7e6fa4
don't complain if ssh without -X/-Y
2020-07-15 21:19:09 +02:00
Martin Diehl
333e840b09
standard behavior
...
most modules have an __version__ attribute
2020-07-15 20:57:56 +02:00
Martin Diehl
6259984e93
simplified
...
complicated, but allows to use functions as properties
2020-07-15 20:54:37 +02:00
Martin Diehl
b0e06f180a
reading numpy manual ...
...
https://numpy.org/doc/stable/reference/generated/numpy.isclose.html
rtol=1.e-8, b=1 gives atol+btol=1.e-8+1e-9, simplified to 1e-8
2020-07-13 22:48:29 +02:00
Francisco Jose Gallardo Basile
e1bbaac0d7
Merge branch 'Vectorize-Orientation' into 'development'
...
Vectorize orientation
See merge request damask/DAMASK!186
2020-07-03 12:22:04 +02:00
Martin Diehl
7b3d1204fa
easier to use
2020-07-03 07:29:31 +02:00
Philip Eisenlohr
d4f97f8346
Merge branch 'misc-improvements' into 'development'
...
Misc improvements
See merge request damask/DAMASK!184
2020-07-02 21:52:47 +02:00
Philip Eisenlohr
7b899f1ff1
fixed output number format width for single increment0
2020-07-02 11:33:09 -04:00
Philip Eisenlohr
81b3c10305
removed ambiguous variable "l"
2020-07-02 10:37:57 -04:00
Philip Eisenlohr
368a241931
added testing of __iadd__ and __invert__
2020-07-02 10:27:52 -04:00
Philip Eisenlohr
5a96708f41
added __iadd__ method
2020-07-02 10:26:04 -04:00
Philip Eisenlohr
f3ff2e7412
added __iadd__ method
2020-07-02 10:25:04 -04:00
Philip Eisenlohr
3b72d0ec72
added __invert__ method to reverse colormap
2020-07-02 10:13:47 -04:00
Martin Diehl
b88becb9d0
don't go out of focus during initialization
2020-07-02 08:25:35 +02:00
Martin Diehl
208d5109d4
still needed ...
2020-07-02 08:14:13 +02:00
Martin Diehl
86dc7054a4
still needed
2020-07-01 22:11:16 +02:00
Martin Diehl
4abd77fccf
more test coverage
2020-07-01 17:31:16 +02:00
Martin Diehl
be1eb996e0
more tests and cleaning
2020-07-01 15:12:34 +02:00
Martin Diehl
a7e3dd5a56
Merge branch 'development' into Vectorize-Orientation
2020-07-01 13:30:39 +02:00
Martin Diehl
e18a5b8a1b
simplifications + more tests
2020-07-01 08:57:28 +02:00
Martin Diehl
de8e9b5fc1
fast reduced operation
2020-07-01 00:37:02 +02:00
Martin Diehl
23365660d8
polishing
2020-06-30 23:18:32 +02:00
Martin Diehl
ef0c78745a
fix for vectorized in_SST + test
2020-06-30 23:05:41 +02:00
Martin Diehl
49d448dced
vectorized and cleaned
2020-06-30 21:43:57 +02:00
Martin Diehl
9a83b11a99
testing IPF color (vectorization)
2020-06-30 18:41:59 +02:00
Martin Diehl
bdb461a553
more flexible and independent
2020-06-30 18:12:39 +02:00
Martin Diehl
6e27a140f6
better split
2020-06-30 17:35:52 +02:00
Martin Diehl
3d6afff27a
clearer name
2020-06-30 17:30:29 +02:00
Martin Diehl
be21d1289d
using slicing method
2020-06-30 16:33:04 +02:00
Martin Diehl
c86e3e292c
WIP: cleaning namespace
2020-06-30 14:07:10 +02:00
Martin Diehl
9d94b521ad
polishing
2020-06-30 13:31:58 +02:00
Martin Diehl
ce7018164f
WIP: more reasonable naming
2020-06-30 13:05:06 +02:00
Martin Diehl
b8b34080fe
enable array like slicing/iteration
2020-06-30 12:16:47 +02:00
Martin Diehl
c8adfae0fa
bugfix: wrong variables used
2020-06-30 07:16:49 +02:00
Philip Eisenlohr
8dc87023d1
test from_range; update ASCII colormap labels (i_RGBA)
2020-06-29 22:23:24 -04:00
Philip Eisenlohr
decbe8074a
not using unassigned variable
2020-06-29 22:22:21 -04:00
Philip Eisenlohr
d3b3d628b2
PEP conformity...
2020-06-29 22:07:14 -04:00
Philip Eisenlohr
39aac76859
__add__, from_range, fixed missing np.array(colors), show peppered...
2020-06-29 22:04:03 -04:00
Philip Eisenlohr
97ca1b1a9b
try wxPython before tkinter, recent macOS otherwise fails
2020-06-29 22:02:12 -04:00
f.basile
d06daec4cb
reducec vectorized is improved
2020-06-29 18:25:45 +02:00
Martin Diehl
2d0c680daf
useful information
2020-06-29 07:30:42 +02:00
f.basile
4875191ffd
change if statement so github doesnt complain
2020-06-28 19:32:22 +02:00
Martin Diehl
a657125840
standard version string
2020-06-28 19:30:23 +02:00
f.basile
a99f016438
problem with if value is true / if value == True
2020-06-28 19:29:52 +02:00
Martin Diehl
c7eb56a63d
single precision reference files
2020-06-28 19:25:58 +02:00
Martin Diehl
37f7362cbe
Merge branch 'development' into misc-improvements
2020-06-28 19:23:17 +02:00
Martin Diehl
323f828606
Merge branch 'development' into modernize_colormap
2020-06-28 19:09:52 +02:00
f.basile
8484d2e6cc
fix github stuff
2020-06-28 19:05:10 +02:00
f.basile
352c4e95f1
more vectorized
2020-06-28 19:03:06 +02:00
Martin Diehl
1cfa6d44d9
dummy version could be useful for other tests
...
note that monkey patching requires direct access to damask.version in
the respective modules.
'from xx import yy' creates a copy (at least for the version string).
2020-06-28 11:51:30 +02:00
Martin Diehl
b3f5ee022a
unified style
2020-06-28 11:40:19 +02:00
Martin Diehl
e6a87da37c
compare to reference results
...
need to patch damask.version to be independent of version strings (in
json and ASCII table)
2020-06-28 11:20:09 +02:00
Martin Diehl
6a748d2edf
do not expand single strings into characters
2020-06-28 11:19:18 +02:00
Martin Diehl
ae4146f1c6
report version, write out 'modern' ASCII table style
2020-06-28 11:18:22 +02:00
Martin Diehl
e81b67e964
polishing
2020-06-28 10:32:59 +02:00
Martin Diehl
1c03bd157f
more testing
2020-06-28 10:25:28 +02:00
Martin Diehl
b78c809375
real output
2020-06-28 10:25:28 +02:00
Martin Diehl
3513754647
low/high instead of left/right
2020-06-28 10:25:28 +02:00
Martin Diehl
f4d13bc810
binary representation depends on vtk lib version
2020-06-28 10:07:31 +02:00
Martin Diehl
d965d66319
[skip ci] documenting
2020-06-28 09:34:10 +02:00
Martin Diehl
8a9a768a77
support pathlib.Path
2020-06-28 07:17:51 +02:00
Martin Diehl
8d5a72e936
more test, swich to pathlib
2020-06-27 23:38:58 +02:00
Martin Diehl
8c8132bcd7
coordinates should not have random names
2020-06-27 23:37:09 +02:00
Martin Diehl
c929af12c0
testing/polishing
2020-06-27 19:44:12 +02:00
Martin Diehl
cf63226721
testing all conversions
2020-06-27 18:55:27 +02:00
Martin Diehl
234699bd18
reverse should return DAMASK colormap
2020-06-27 16:25:10 +02:00
Martin Diehl
e779e190ea
new colormap class for use in python
...
- based on matplotlib "ListedColormap"
- constructors
- Array of RGB values (inherited),
- 'from_bounds': perceptual uniform colormap within given bounds
- 'from_predefined': from matplotlib or DAMASK templates
- export to files (WIP)
- preview on screen
2020-06-27 16:12:40 +02:00
Martin Diehl
1f9b5280cb
forgotten debug statement
2020-06-26 11:47:04 +02:00
Martin Diehl
a69f82e7c3
speed up vtk out
...
- limit to single precision
- write in background
2020-06-26 11:45:54 +02:00
Martin Diehl
bfae88a364
numpy compatible
2020-06-26 11:45:30 +02:00
Martin Diehl
bddb514072
more systematic reporting
2020-06-26 11:45:06 +02:00
Martin Diehl
27220a03bc
not invalid anymore
2020-06-25 09:23:43 +02:00
Martin Diehl
3290e2c585
handle even obscure directions
2020-06-25 08:29:36 +02:00
Martin Diehl
5d7213b062
restore reminder to document changes
...
causes conflicts with outdated tests and is not urgent: postpone until
release.
2020-06-25 08:19:07 +02:00
Martin Diehl
c9829f0f1f
only Chuck Norris can divide by zero
2020-06-25 08:18:39 +02:00
Martin Diehl
cd23937af5
Merge branch 'development' into f-strings
2020-06-25 07:46:24 +02:00
Philip Eisenlohr
e64d353865
condensed scale_to_coprime; added test of scale_to_coprime
2020-06-24 18:37:33 -04:00
Philip Eisenlohr
9999560247
easier understanding of from_ang data layout interpretation
2020-06-24 18:36:43 -04:00
Philip Eisenlohr
14d3b7e66d
more f-stringing
2020-06-24 16:59:55 -04:00
Philip Eisenlohr
966b6f8007
shapes init copes with integers instead of strict tuples; introduced f-strings
2020-06-24 14:18:06 -04:00
Philip Eisenlohr
f8f433e826
introduced f-strings
2020-06-24 14:13:56 -04:00
Philip Eisenlohr
ff858fd4c8
[skip ci] corrected help string for "srepr"
2020-06-24 20:13:09 +02:00
Philip Eisenlohr
4314ec1f37
[skip ci] started to replace .format() with f-strings
2020-06-24 11:02:37 -04:00
Anderson Wallace Paiva do Nascimento
3d93a5ff00
Merge branch 'migrate-to-pathlib' into 'development'
...
Migrate to pathlib
See merge request damask/DAMASK!177
2020-06-24 14:54:36 +02:00
Martin Diehl
6fa5ae6ebf
literature from Karo
2020-06-22 23:14:58 +02:00
Martin Diehl
e33895dd35
[skip ci] better logic
2020-06-21 10:37:09 +02:00
Martin Diehl
c6a5bb8a3b
is 2020
2020-06-21 10:04:45 +02:00
Martin Diehl
4c5939ef23
small polishing
2020-06-20 22:51:00 +02:00
Martin Diehl
15b43bcebf
from_directions is not general, removed
...
polishing
2020-06-20 19:57:49 +02:00
Martin Diehl
3f63a4fdbc
[skip ci] typo
2020-06-20 18:13:34 +02:00