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118 Commits

Author SHA1 Message Date
Martin Diehl 2bbc4c4e46 polishing 2022-01-22 09:04:14 +01:00
Daniel Otto de Mentock bfa7fd6ecc Merge branch 'development' into 'typehints_vtk_util' 
# Conflicts:
#   python/damask/_grid.py
 2022-01-20 16:54:23 +00:00
Daniel Otto de Mentock f9f0972e3e added FloatSequence type to vtk.from_rectilinear_gridfunction 2022-01-19 10:58:33 +01:00
Daniel Otto de Mentock 5d8fff423e replaced vtk.init argument type with vtkDataSet 2022-01-19 10:40:29 +01:00
Daniel Otto de Mentock 7b158ba108 added typehints for vtk module 2022-01-17 15:00:25 +01:00
Martin Diehl a545baebbf VTK polishing 
avoid segmentation fault (also allows testing)
 2022-01-16 19:23:12 +01:00
Martin Diehl 3acabcdc7f docstring adjustments 2022-01-12 23:57:21 +01:00
Martin Diehl 2c1231a806 using best practices from grid_filters 2022-01-12 23:06:48 +01:00
Martin Diehl 2b9d416734 fixes for old VTK and/or old numpy 2021-09-02 08:45:20 +02:00
Martin Diehl 01a32ea236 import from Neper 2021-06-15 22:29:28 +02:00
Martin Diehl 1bfbd30ae2 polishing 2021-06-15 19:53:05 +02:00
Martin Diehl 218e6a79a8 VTK image data is the appropriate type, not VTK rectilinear grid 
FFTs require constant spacing in all three directions, this is
guaranteed by the vtkImageData but not by vtkRectilinearGrid
 2021-06-15 19:02:26 +02:00
Martin Diehl a48fa5d797 better readable and documented 2021-05-07 20:07:59 +02:00
Martin Diehl d4a46b9be8 Merge remote-tracking branch 'origin/development' into drop-old-DADF5-support 2021-04-25 17:34:14 +02:00
Martin Diehl 18aa6f7f12 support for string arrays 
allows to add phase label from mapping. Only scalar string arrays are
allowed (no real restriction)
 2021-04-24 22:50:59 +02:00
Philip Eisenlohr 690b478013 [skip ci] language polishing 2021-04-24 13:12:44 -04:00
Martin Diehl 95831e53f6 using improved documentation 2021-04-24 16:23:34 +02:00
Martin Diehl 3977e230b3 documenting and ensuring consistent argument names 
'name' for a dataset matches the analogy to a file name
 2021-04-24 14:47:45 +02:00
Martin Diehl cf1ce6a1fe support for masked array 
masked arrays are the outcome of Result.place
 2021-04-02 08:07:22 +02:00
Martin Diehl 9459fea929 support for pandas not planned any more 
damask.Table supports multidimensional data, numpy.ma supports masked
arrays
 2021-04-02 07:42:54 +02:00
Martin Diehl be9e00347b cleaning 
dropped support for legacy table
 2021-03-27 10:11:31 +01:00
Martin Diehl b00b4bb0ad more general handling of precision 
Anaconda on windows does not have np.float128 defined, but aliases
should work
https://numpy.org/devdocs/user/basics.types.html
 2021-02-19 17:03:41 +01:00
Martin Diehl e8fae6b2a7 simplified 2021-02-11 21:56:53 +01:00
Martin Diehl 0f6094890a simplified 
damask.environment does not offer any advantage over os.environ for
variables. After 'root_dir' was removed, the whole module became
obsolete
 2021-01-15 12:14:05 +01:00
Martin Diehl ed286ee09f Merge branch 'rename-grid-2' into misc-improvements 2020-12-05 09:50:46 +01:00
Martin Diehl ac0a20696c rename: grid -> cells 2020-12-03 22:16:34 +01:00
Martin Diehl c880052250 avoid evil eval 2020-12-02 14:37:44 +01:00
Martin Diehl 5ab2847b36 polishing 2020-11-23 20:06:34 +01:00
Martin Diehl 903c185ee6 distinguish 'file not found' and 'invalid file' 2020-11-19 10:39:41 +01:00
Martin Diehl c74e57f225 vtk error handling is not very helpful 2020-11-19 09:59:39 +01:00
Martin Diehl 30938a8278 correct order (brackets) 2020-11-05 21:38:00 +01:00
Martin Diehl ae959b9cc2 allow '.' in filenames 2020-11-04 18:08:04 +01:00
Martin Diehl 0804e6ee74 pythonic names 2020-10-27 13:50:47 +01:00
Martin Diehl 201a62d7c9 easier visualization if verts have a point-cell 2020-10-27 13:19:53 +01:00
Martin Diehl c42511f101 small polishing 2020-09-18 16:32:59 +02:00
Philip Eisenlohr 96ad358f83 modified file reading/writing methods to load_X, save_X formalism 2020-09-15 01:14:05 -04:00
Martin Diehl a5d5638e4a allow uncompressed files 2020-09-12 13:46:55 +02:00
Philip Eisenlohr 865c90d00b first check data type, then determine length of data... 2020-09-09 19:10:03 -04:00
Philip Eisenlohr 7d9a4c08ce Do not strictly require np.ndarrays for grid, size, or origin when not essential for functionality. 2020-09-10 00:59:40 +02:00
Philip Eisenlohr 6785062a10 Merge branch 'development' into 'vtk-to-file-method' 
# Conflicts:
#   python/tests/test_VTK.py
 2020-08-31 21:10:29 +02:00
Philip Eisenlohr 3f24d16603 renamed VTK.write() to VTK.to_file() 2020-08-26 16:15:15 -04:00
Martin Diehl bf401e56cf avoid name clash with damask.Geom 2020-08-25 09:56:24 +02:00
Martin Diehl 51da632108 aiming at testing each individual statement 2020-08-25 07:49:56 +02:00
Martin Diehl 2751cdb6af support comments also in vtr 2020-08-25 00:40:14 +02:00
Philip Eisenlohr 2560f014a3 Merge remote-tracking branch 'origin/increase-geom-test-coverage' into geom-out-of-place 2020-08-24 17:17:31 -04:00
Martin Diehl 9d505c8518 better readable 
- more explicit reporting
- always relative import for DAMASK
 2020-08-24 09:58:24 +02:00
Martin Diehl 507a165733 functionality for getting data 
- handy for Geom class, but could be of general interest
- add/set/get comments: follows same functions as for Geom class
 2020-08-24 06:40:36 +02:00
Martin Diehl 44015082a3 dead code (copy and paste error) 2020-08-24 00:34:07 +02:00
Martin Diehl a1c78b778a WIP: track history in VTK objects 2020-08-23 23:22:53 +02:00
Martin Diehl ae20f5ffe6 attempt to fix parallel writing on MacOS 
should resolve TypeError: cannot pickle
'vtkmodules.vtkIOXML.vtkXMLRectilinearGridWriter' object error
 2020-08-03 18:19:38 +02:00
Martin Diehl 6259984e93 simplified 
complicated, but allows to use functions as properties
 2020-07-15 20:54:37 +02:00
Philip Eisenlohr d4f97f8346 Merge branch 'misc-improvements' into 'development' 
Misc improvements

See merge request damask/DAMASK!184
 2020-07-02 21:52:47 +02:00
Martin Diehl b88becb9d0 don't go out of focus during initialization 2020-07-02 08:25:35 +02:00
Martin Diehl 37f7362cbe Merge branch 'development' into misc-improvements 2020-06-28 19:23:17 +02:00
Martin Diehl 323f828606 Merge branch 'development' into modernize_colormap 2020-06-28 19:09:52 +02:00
Martin Diehl b3f5ee022a unified style 2020-06-28 11:40:19 +02:00
Martin Diehl 8a9a768a77 support pathlib.Path 2020-06-28 07:17:51 +02:00
Martin Diehl 8c8132bcd7 coordinates should not have random names 2020-06-27 23:37:09 +02:00
Martin Diehl a69f82e7c3 speed up vtk out 
- limit to single precision
- write in background
 2020-06-26 11:45:54 +02:00
Martin Diehl 5d7213b062 restore reminder to document changes 
causes conflicts with outdated tests and is not urgent: postpone until
release.
 2020-06-25 08:19:07 +02:00
Philip Eisenlohr f8f433e826 introduced f-strings 2020-06-24 14:13:56 -04:00
Martin Diehl c5d0c7e52e easier to read, more flexible 2020-06-03 10:44:40 +02:00
Martin Diehl c6c1878b13 asterisk is the emphasize sign for restructured text 
not really needed here
 2020-04-12 15:19:32 +02:00
Martin Diehl 6ef7410e5a testing VTK wrappers 2020-03-31 11:04:06 +02:00
Martin Diehl bbce3456e8 advise from pylint 2020-03-22 22:30:38 +01:00
Martin Diehl 20a06840b0 works also for arrays ... 2020-03-21 11:07:21 +01:00
Martin Diehl eb66db9c36 Merge branch 'no-python-namespace-clutter' into MiscImprovements 2020-03-20 23:46:37 +01:00
Martin Diehl 9bb0608187 maybe this is the cleaner way 2020-03-19 14:40:30 +01:00