DAMASK_EICMD/lib/msc_tools.py

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class MSC_TOOLS():
import os,string
releases = { \
'2010.2':['linux64',''],
'2010': ['linux64',''],
'2008r1':[''],
'2007r1':[''],
'2005r3':[''],
}
def library_paths(self,callerPath='',libRelation=''):
import os
if os.getenv('DAMASK_ROOT'): DamaskRoot = os.getenv('DAMASK_ROOT')
else: DamaskRoot = os.path.normpath(os.path.join(os.path.dirname(os.path.realpath(callerPath)),libRelation))
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thePath = ''
try: # check for MSC.Mentat installation location
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file = open(os.path.join(DamaskRoot,'lib/pathinfo'))
for line in file.readlines():
if line.split()[0].lower() == 'msc': MSCpath = os.path.normpath(line.split()[1])
file.close()
except:
MSCpath = '/msc'
for release,subdirs in sorted(self.releases.items(),reverse=True):
for subdir in subdirs:
libPath = '%s/mentat%s/shlib/%s'%(MSCpath,release,subdir)
if os.path.exists(libPath):
thePath = libPath
break
else:
continue
break
return thePath
def submit_job(self,
run_marc_path='/msc/marc2010/tools/',
subroutine_dir=None,
subroutine_name='DAMASK_marc2010',
compile='yes',
compiled_dir='../../../code/',
modelname='one_element_model',
jobname='job1',
#IOdir='',
host=[]
):
import os
import subprocess, shlex
import shutil
if subroutine_dir is None:
subroutine_dir=os.getenv('DAMASK_ROOT')+'/code/'
# Define all options [see Marc Installation and Operation Guide, pp 23]
run_marc=run_marc_path+'run_marc'
jid=' -jid '+modelname+'_'+jobname
compilation=' -u '+subroutine_dir+subroutine_name+'.f90'+' -save y'
options=' -nprocd 1 -autorst 0 -ci n -cr n -dcoup 0 -b no -v no'
cmd=run_marc+jid+options
if compile=='yes' or compile=='y':
cmd=cmd+compilation
print 'Job submission with compilation.'
else:
shutil.copy2(subroutine_dir+subroutine_name+'.f90','./'+subroutine_name+'.f90')
shutil.copy2(compiled_dir+subroutine_name+'.marc','./'+subroutine_name+'.marc')
prog=' -prog '+subroutine_name
cmd=cmd+prog
print 'Job submission without compilation, using %s'%prog
out=open('out.log','w')
print(cmd)
print shlex.split(cmd)
self.p=subprocess.Popen(shlex.split(cmd),stdout=out,stderr=subprocess.STDOUT)
self.p.wait()
out.close()
def exit_number_from_outFile(self,outFile=None):
import string
fid_out=open(outFile,'r')
for ln in fid_out:
if (string.find(ln,'tress iteration') is not -1):
print ln
elif (string.find(ln,'Exit number') is not -1):
substr=ln[string.find(ln,'Exit number'):len(ln)]
exitnumber=substr[12:16]
fid_out.close()
return int(exitnumber)
fid_out.close()
return -1